View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9703_low_33 (Length: 318)
Name: NF9703_low_33
Description: NF9703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9703_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 16 - 278
Target Start/End: Original strand, 34021037 - 34021299
Alignment:
| Q |
16 |
aagaagaactattgtaaatatttgagaactatgttttggagacaccattgtatgagtagtgactttgaatttgattgattttgaggcaaggtataataga |
115 |
Q |
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| T |
34021037 |
aagaagaactattgtaaatatttgagaactatgttttggagacaccattgtatgagtagtgactttgaatttgattgattttgaggcaaggtataataga |
34021136 |
T |
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| Q |
116 |
tagaagagcttgtatatgaagtagggtgtgtgtagaatttggttatgctattcttggcttacttatattgcacgaatgctgtgccaacggctcaaagcaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34021137 |
tagaagagcttgtatatgaagtagggtgtgtgtagaatttggttatgctattcttggcttacttatattgcacgaatgctgtgccaacggctcaaagcaa |
34021236 |
T |
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| Q |
216 |
atattactcattaagtaaccaaaaaattcgagtggaaactttatttaattagtgtatttgtat |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34021237 |
atattactcattaagtaaccaaaaaattcgagtggaaactttatttaattagtgtatttgtat |
34021299 |
T |
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