View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9703_low_36 (Length: 307)
Name: NF9703_low_36
Description: NF9703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9703_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 19 - 287
Target Start/End: Complemental strand, 45660253 - 45659985
Alignment:
| Q |
19 |
atcaagggtttcagtgtaaccataaagactcagttttgcaatgttttagcaattaagagaatggaagtcatttaatgtagattggttgaaattcattatc |
118 |
Q |
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| T |
45660253 |
atcaagggtttcagtgtaaccataaagactcagttttgcaatgttttagcaattaagagaatggaagtcatttaatgtagattggttgaaattcattatc |
45660154 |
T |
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| Q |
119 |
tgttgtgaatgtaaactagaaaatgtaaagaggagtattttggaacttaagtcacttacccataggttactattttgaaattccattatctgatggagta |
218 |
Q |
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| T |
45660153 |
tgatgtgaatgtatactagaaaatgtaaagaggagtattttggaacttaagtcacttacccataggttactattttgaaattccattatctgatggagta |
45660054 |
T |
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| Q |
219 |
ttttagaacttaattctctcaccaaaggttagagtggctgaaatctttttgcttcaattgacattaaat |
287 |
Q |
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| T |
45660053 |
ttttagaacttaattctctcaccataggttagagtggctgaaatctttttgcttcaattgacattaaat |
45659985 |
T |
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