View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9703_low_43 (Length: 273)
Name: NF9703_low_43
Description: NF9703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9703_low_43 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 17 - 264
Target Start/End: Original strand, 7259760 - 7260007
Alignment:
| Q |
17 |
aaagggaggggtaggggacctttgtcagctggaatgtcccatattttatagcatttgtcatttagtgctgcattggaatatgcttaccctccaacttgca |
116 |
Q |
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| T |
7259760 |
aaagggaggggtaggggacctttgtcagctggaatgtcccatattttatagcatttgtcatttagtgctgcattggaatatgcttaccctccaacttgca |
7259859 |
T |
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| Q |
117 |
acaaaatttcttatatataacgccattctatagaaagaaatcttcaatcccacattcacattcaaaccaaattcatcatcaaacaaacccaaacatgatt |
216 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7259860 |
acaaaatttcttatatataacgccattctatagcaagaaatcttcaatcccacattcacattcaaaccaaattcatcatcaaacaaacccaaacatgatt |
7259959 |
T |
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| Q |
217 |
caaatcattttcctcatttcacttttcctatccatttcctatgcttct |
264 |
Q |
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||||||||||||||| ||||||||||||||||||||||| |||||||| |
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| T |
7259960 |
caaatcattttcctcctttcacttttcctatccatttccaatgcttct |
7260007 |
T |
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