View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9703_low_45 (Length: 259)

Name: NF9703_low_45
Description: NF9703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9703_low_45
NF9703_low_45
[»] chr6 (38 HSPs)
chr6 (12-135)||(30434461-30434584)
chr6 (159-259)||(26602356-26602456)
chr6 (161-259)||(6330148-6330246)
chr6 (161-259)||(11572144-11572242)
chr6 (161-259)||(13853592-13853690)
chr6 (162-259)||(2830368-2830465)
chr6 (162-259)||(8382969-8383066)
chr6 (160-259)||(8099563-8099662)
chr6 (162-259)||(8417793-8417890)
chr6 (160-259)||(9644729-9644828)
chr6 (160-259)||(9650746-9650845)
chr6 (160-259)||(33052792-33052891)
chr6 (161-259)||(35031000-35031098)
chr6 (161-256)||(28747133-28747228)
chr6 (161-259)||(6068599-6068697)
chr6 (157-259)||(6143587-6143689)
chr6 (162-259)||(17992021-17992118)
chr6 (161-241)||(22896513-22896593)
chr6 (161-236)||(3788093-3788168)
chr6 (200-259)||(13043791-13043850)
chr6 (174-254)||(7596989-7597069)
chr6 (196-259)||(6068974-6069037)
chr6 (157-208)||(13853677-13853728)
chr6 (159-220)||(3421645-3421706)
chr6 (159-208)||(8383053-8383102)
chr6 (177-257)||(3421588-3421668)
chr6 (162-218)||(8186441-8186497)
chr6 (156-208)||(8417877-8417929)
chr6 (160-208)||(33052878-33052926)
chr6 (161-208)||(2830334-2830381)
chr6 (161-208)||(8099529-8099576)
chr6 (161-208)||(11572229-11572276)
chr6 (159-201)||(3788033-3788075)
chr6 (162-208)||(6330115-6330161)
chr6 (162-208)||(26602323-26602369)
chr6 (161-258)||(14936456-14936553)
chr6 (159-212)||(14936537-14936590)
chr6 (162-203)||(22896471-22896512)
[»] chr7 (38 HSPs)
chr7 (157-259)||(7240782-7240884)
chr7 (162-259)||(23314139-23314236)
chr7 (159-259)||(1738444-1738544)
chr7 (157-259)||(7482258-7482360)
chr7 (161-259)||(9268789-9268887)
chr7 (162-259)||(46840893-46840990)
chr7 (159-259)||(38063910-38064010)
chr7 (161-259)||(1565728-1565826)
chr7 (162-259)||(22285732-22285829)
chr7 (162-259)||(31319399-31319496)
chr7 (159-259)||(36583428-36583528)
chr7 (162-259)||(94318-94415)
chr7 (171-259)||(33418409-33418497)
chr7 (172-259)||(36016206-36016293)
chr7 (162-257)||(38441495-38441590)
chr7 (161-259)||(28536750-28536848)
chr7 (161-259)||(4790281-4790379)
chr7 (162-258)||(9575443-9575539)
chr7 (171-254)||(40840128-40840211)
chr7 (171-258)||(7269414-7269501)
chr7 (158-208)||(22285695-22285745)
chr7 (155-208)||(1738531-1738584)
chr7 (171-220)||(29993253-29993302)
chr7 (161-221)||(7661147-7661207)
chr7 (158-208)||(7240745-7240795)
chr7 (162-208)||(36016280-36016326)
chr7 (160-208)||(1565813-1565861)
chr7 (160-208)||(46840858-46840906)
chr7 (161-208)||(7482224-7482271)
chr7 (161-208)||(28536835-28536882)
chr7 (161-208)||(38063997-38064044)
chr7 (158-208)||(9268752-9268802)
chr7 (162-208)||(23314223-23314269)
chr7 (162-208)||(31319483-31319529)
chr7 (162-208)||(36583395-36583441)
chr7 (171-208)||(94402-94439)
chr7 (162-219)||(7269478-7269535)
chr7 (160-209)||(9575407-9575456)
[»] chr5 (37 HSPs)
chr5 (157-259)||(9395383-9395485)
chr5 (160-259)||(41989405-41989504)
chr5 (157-259)||(13103057-13103159)
chr5 (161-259)||(36563537-36563635)
chr5 (161-259)||(11795201-11795299)
chr5 (157-259)||(13033084-13033186)
chr5 (162-259)||(23359975-23360072)
chr5 (162-259)||(37148955-37149052)
chr5 (161-259)||(21575979-21576077)
chr5 (162-256)||(6126860-6126954)
chr5 (161-259)||(17025657-17025755)
chr5 (160-259)||(26350348-26350447)
chr5 (161-251)||(37641995-37642085)
chr5 (162-259)||(20848107-20848203)
chr5 (165-259)||(4443993-4444087)
chr5 (182-259)||(583022-583099)
chr5 (176-243)||(2366352-2366419)
chr5 (159-256)||(966184-966281)
chr5 (214-259)||(38361743-38361788)
chr5 (174-229)||(9006894-9006949)
chr5 (157-208)||(37149039-37149090)
chr5 (159-243)||(35904448-35904530)
chr5 (171-244)||(36595783-36595856)
chr5 (160-208)||(4443958-4444006)
chr5 (175-259)||(39290807-39290891)
chr5 (157-208)||(582984-583035)
chr5 (157-208)||(9395345-9395396)
chr5 (161-208)||(13033050-13033097)
chr5 (161-208)||(13103023-13103070)
chr5 (171-257)||(3549556-3549642)
chr5 (162-208)||(26350434-26350480)
chr5 (159-208)||(20848071-20848120)
chr5 (157-206)||(37641948-37641997)
chr5 (162-218)||(11574154-11574210)
chr5 (160-208)||(17025622-17025670)
chr5 (172-208)||(23359952-23359988)
chr5 (160-208)||(36563622-36563670)
[»] chr4 (50 HSPs)
chr4 (162-259)||(46797758-46797855)
chr4 (157-259)||(48336296-48336398)
chr4 (162-259)||(47833644-47833741)
chr4 (157-258)||(47838612-47838713)
chr4 (159-259)||(33621829-33621929)
chr4 (162-256)||(6121893-6121987)
chr4 (161-259)||(53337403-53337501)
chr4 (162-259)||(3372154-3372251)
chr4 (161-258)||(3993010-3993107)
chr4 (162-259)||(20538686-20538783)
chr4 (162-259)||(42797765-42797862)
chr4 (159-259)||(5986909-5987009)
chr4 (159-259)||(41469763-41469863)
chr4 (156-259)||(3422094-3422196)
chr4 (161-259)||(3904682-3904780)
chr4 (161-259)||(24704403-24704501)
chr4 (157-259)||(51894577-51894679)
chr4 (161-259)||(52756708-52756806)
chr4 (163-256)||(40913190-40913283)
chr4 (162-259)||(43900582-43900679)
chr4 (162-259)||(7579343-7579440)
chr4 (181-259)||(26231610-26231688)
chr4 (181-259)||(33551234-33551312)
chr4 (162-259)||(41615676-41615773)
chr4 (175-258)||(50430431-50430514)
chr4 (160-256)||(17344249-17344345)
chr4 (193-257)||(25855118-25855182)
chr4 (162-229)||(4780358-4780425)
chr4 (160-208)||(43900547-43900595)
chr4 (162-218)||(44900080-44900136)
chr4 (161-212)||(17236868-17236919)
chr4 (174-233)||(45478151-45478210)
chr4 (157-208)||(47833606-47833657)
chr4 (158-208)||(48336259-48336309)
chr4 (159-208)||(3372118-3372167)
chr4 (159-208)||(3992973-3993022)
chr4 (161-208)||(33551200-33551247)
chr4 (161-208)||(40913273-40913320)
chr4 (162-208)||(20538770-20538816)
chr4 (162-208)||(24704370-24704416)
chr4 (161-207)||(26231576-26231622)
chr4 (158-208)||(51894666-51894716)
chr4 (162-208)||(53337370-53337416)
chr4 (159-208)||(42797729-42797778)
chr4 (162-218)||(1716301-1716357)
chr4 (174-226)||(1716365-1716417)
chr4 (177-229)||(6422530-6422582)
chr4 (196-256)||(31013057-31013117)
chr4 (160-208)||(41469850-41469898)
chr4 (171-243)||(45725905-45725977)
[»] chr8 (50 HSPs)
chr8 (159-259)||(7785775-7785875)
chr8 (161-259)||(54611-54709)
chr8 (161-259)||(2890161-2890259)
chr8 (162-259)||(6552688-6552785)
chr8 (158-259)||(44498183-44498284)
chr8 (159-259)||(7805696-7805796)
chr8 (160-256)||(39571201-39571297)
chr8 (160-259)||(12763652-12763751)
chr8 (161-259)||(25600999-25601097)
chr8 (161-259)||(43199353-43199451)
chr8 (162-259)||(3304278-3304375)
chr8 (160-259)||(32114473-32114572)
chr8 (160-259)||(32211361-32211460)
chr8 (162-256)||(33289261-33289355)
chr8 (162-259)||(31654646-31654743)
chr8 (171-259)||(12343149-12343237)
chr8 (160-259)||(15888350-15888449)
chr8 (160-256)||(7012207-7012303)
chr8 (177-259)||(13578890-13578972)
chr8 (157-243)||(27422239-27422325)
chr8 (161-258)||(8587204-8587301)
chr8 (161-258)||(28463645-28463742)
chr8 (171-259)||(24691988-24692075)
chr8 (157-208)||(54696-54747)
chr8 (157-212)||(8587165-8587220)
chr8 (162-208)||(31654613-31654659)
chr8 (159-208)||(2890246-2890295)
chr8 (177-258)||(17006945-17007026)
chr8 (177-258)||(17570221-17570302)
chr8 (171-212)||(28463620-28463661)
chr8 (160-208)||(4245665-4245713)
chr8 (160-208)||(7785862-7785910)
chr8 (160-208)||(7805783-7805831)
chr8 (171-218)||(15688039-15688086)
chr8 (165-212)||(17006914-17006961)
chr8 (165-212)||(17570286-17570333)
chr8 (178-229)||(35564706-35564757)
chr8 (161-208)||(43199438-43199485)
chr8 (162-208)||(3304362-3304408)
chr8 (162-208)||(6552655-6552701)
chr8 (162-208)||(12343224-12343270)
chr8 (162-208)||(15888436-15888482)
chr8 (160-218)||(24692052-24692110)
chr8 (163-209)||(30171483-30171529)
chr8 (162-208)||(32114559-32114605)
chr8 (161-231)||(33057655-33057725)
chr8 (162-208)||(44498271-44498317)
chr8 (230-259)||(4245649-4245678)
chr8 (161-206)||(32211449-32211494)
chr8 (157-206)||(33057589-33057638)
[»] chr2 (39 HSPs)
chr2 (159-259)||(41478636-41478736)
chr2 (160-259)||(3055591-3055690)
chr2 (160-259)||(37990011-37990110)
chr2 (157-259)||(13197705-13197807)
chr2 (157-259)||(16243778-16243880)
chr2 (161-259)||(44398719-44398817)
chr2 (162-259)||(15896875-15896972)
chr2 (159-259)||(9047752-9047852)
chr2 (157-259)||(6648514-6648616)
chr2 (161-259)||(38917521-38917619)
chr2 (161-259)||(44397580-44397678)
chr2 (162-259)||(12337937-12338034)
chr2 (162-259)||(15372259-15372356)
chr2 (159-259)||(37666607-37666707)
chr2 (159-259)||(41492893-41492993)
chr2 (161-259)||(13344517-13344615)
chr2 (162-259)||(16044317-16044414)
chr2 (161-259)||(30099181-30099279)
chr2 (165-259)||(44804581-44804675)
chr2 (181-259)||(4683951-4684029)
chr2 (177-259)||(12170414-12170496)
chr2 (173-258)||(16734817-16734902)
chr2 (169-257)||(31150688-31150771)
chr2 (202-259)||(41453092-41453149)
chr2 (157-208)||(15372221-15372272)
chr2 (162-258)||(13724102-13724198)
chr2 (160-208)||(37990097-37990145)
chr2 (160-208)||(41478723-41478771)
chr2 (161-208)||(3055557-3055604)
chr2 (161-208)||(4684016-4684063)
chr2 (161-208)||(15896841-15896888)
chr2 (157-212)||(23227352-23227407)
chr2 (161-208)||(44397546-44397593)
chr2 (161-208)||(44398685-44398732)
chr2 (162-208)||(13197794-13197840)
chr2 (160-218)||(13724176-13724234)
chr2 (162-208)||(16044401-16044447)
chr2 (162-208)||(37666694-37666740)
chr2 (158-190)||(13775832-13775864)
[»] chr1 (47 HSPs)
chr1 (159-259)||(14984870-14984970)
chr1 (157-259)||(9981680-9981782)
chr1 (162-259)||(27159358-27159455)
chr1 (162-259)||(31842795-31842892)
chr1 (162-259)||(39401966-39402063)
chr1 (162-259)||(44668093-44668190)
chr1 (161-259)||(47216698-47216796)
chr1 (162-259)||(11795966-11796063)
chr1 (162-259)||(26471065-26471162)
chr1 (162-259)||(47777481-47777578)
chr1 (160-259)||(1050921-1051020)
chr1 (160-259)||(34042729-34042828)
chr1 (159-259)||(12483625-12483725)
chr1 (171-259)||(44955215-44955303)
chr1 (159-259)||(47588334-47588434)
chr1 (161-256)||(25694355-25694450)
chr1 (157-259)||(47969728-47969830)
chr1 (161-259)||(17556785-17556884)
chr1 (182-259)||(23278021-23278098)
chr1 (160-259)||(11897087-11897186)
chr1 (161-257)||(37552176-37552272)
chr1 (172-259)||(12213484-12213571)
chr1 (162-258)||(11989815-11989911)
chr1 (162-258)||(16448108-16448204)
chr1 (161-218)||(16448182-16448239)
chr1 (161-218)||(11897053-11897110)
chr1 (158-208)||(27159442-27159492)
chr1 (158-208)||(44668177-44668227)
chr1 (177-258)||(571542-571622)
chr1 (174-243)||(1598394-1598461)
chr1 (159-208)||(12483712-12483761)
chr1 (159-208)||(26471149-26471198)
chr1 (160-208)||(11795931-11795979)
chr1 (161-208)||(9981646-9981693)
chr1 (164-243)||(12069535-12069614)
chr1 (162-208)||(1050888-1050934)
chr1 (162-208)||(31842879-31842925)
chr1 (162-208)||(39402050-39402096)
chr1 (162-208)||(47216783-47216829)
chr1 (171-208)||(14984846-14984883)
chr1 (161-206)||(34042695-34042740)
chr1 (171-208)||(47777565-47777602)
chr1 (176-243)||(12047155-12047223)
chr1 (161-209)||(17556751-17556799)
chr1 (162-206)||(23278087-23278131)
chr1 (161-257)||(30800460-30800556)
chr1 (174-218)||(45871214-45871258)
[»] chr3 (57 HSPs)
chr3 (156-259)||(8817380-8817483)
chr3 (160-259)||(10298012-10298111)
chr3 (161-259)||(49823380-49823478)
chr3 (162-259)||(19557052-19557149)
chr3 (162-259)||(48340430-48340527)
chr3 (160-259)||(17653745-17653844)
chr3 (160-259)||(40690994-40691093)
chr3 (161-259)||(22721964-22722062)
chr3 (161-259)||(37508954-37509052)
chr3 (161-259)||(51406706-51406804)
chr3 (162-259)||(2787832-2787929)
chr3 (162-259)||(34080030-34080127)
chr3 (161-259)||(4238627-4238725)
chr3 (157-259)||(6013331-6013433)
chr3 (161-259)||(8437458-8437556)
chr3 (165-259)||(9111497-9111591)
chr3 (162-256)||(38964428-38964522)
chr3 (165-259)||(42507358-42507452)
chr3 (161-259)||(46208063-46208161)
chr3 (162-259)||(21295326-21295423)
chr3 (162-259)||(44785396-44785493)
chr3 (160-259)||(36095678-36095777)
chr3 (172-259)||(42170356-42170443)
chr3 (174-259)||(33942944-33943029)
chr3 (157-259)||(35513506-35513608)
chr3 (160-217)||(9027140-9027197)
chr3 (161-218)||(34988074-34988131)
chr3 (162-227)||(34988140-34988205)
chr3 (157-208)||(4238589-4238640)
chr3 (162-257)||(9213551-9213646)
chr3 (161-208)||(46208029-46208076)
chr3 (162-208)||(17653712-17653758)
chr3 (158-208)||(22721927-22721977)
chr3 (162-208)||(35513473-35513519)
chr3 (162-208)||(37508921-37508967)
chr3 (159-208)||(21295410-21295459)
chr3 (196-257)||(21917688-21917749)
chr3 (159-208)||(34080114-34080163)
chr3 (162-218)||(2131746-2131802)
chr3 (162-257)||(5323241-5323337)
chr3 (160-208)||(8817470-8817518)
chr3 (160-208)||(9111578-9111626)
chr3 (160-208)||(44785480-44785528)
chr3 (157-208)||(2787916-2787967)
chr3 (161-208)||(19557136-19557183)
chr3 (161-208)||(36095764-36095811)
chr3 (157-208)||(38964387-38964438)
chr3 (161-208)||(49823465-49823512)
chr3 (160-218)||(9213514-9213572)
chr3 (162-208)||(10297979-10298025)
chr3 (160-250)||(26019478-26019568)
chr3 (159-221)||(45652066-45652128)
chr3 (159-208)||(8437422-8437471)
chr3 (220-253)||(8951954-8951987)
chr3 (159-208)||(42170430-42170479)
chr3 (159-208)||(42507439-42507488)
chr3 (192-229)||(48729569-48729606)
[»] scaffold0204 (2 HSPs)
scaffold0204 (157-259)||(23818-23920)
scaffold0204 (158-208)||(23781-23831)
[»] scaffold0482 (2 HSPs)
scaffold0482 (159-259)||(12893-12993)
scaffold0482 (160-208)||(12858-12906)
[»] scaffold0464 (2 HSPs)
scaffold0464 (157-259)||(6126-6228)
scaffold0464 (162-208)||(6215-6261)
[»] scaffold0009 (2 HSPs)
scaffold0009 (162-259)||(49538-49635)
scaffold0009 (160-208)||(49503-49551)
[»] scaffold1707 (2 HSPs)
scaffold1707 (174-259)||(1368-1453)
scaffold1707 (171-208)||(1344-1381)
[»] scaffold0011 (1 HSPs)
scaffold0011 (160-256)||(231301-231397)
[»] scaffold0650 (1 HSPs)
scaffold0650 (178-258)||(1-81)
[»] scaffold0003 (1 HSPs)
scaffold0003 (177-258)||(312752-312833)


Alignment Details
Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 30434461 - 30434584
Alignment:
Q  12 agcataggtcccgggagataaaagtctgataaaggcatggtttatggttctatttaatgaacttcgtttttgaagatatttgaagtataccaaggaagaa 111  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30434461 agcatgggtcccgggagataaaaggctgataaaggcatggtttatggttctatttaatgaacttcgtttttgaagatatttgaagtataccaaggaagaa 30434560  T
Q  112 aacggctgtattggaacagctcaa 135  Q
    ||| ||||||||||| ||||||||    
T  30434561 aactgctgtattggagcagctcaa 30434584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 26602456 - 26602356
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26602456 taatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 26602357  T
Q  259 t 259  Q
    |    
T  26602356 t 26602356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 6330246 - 6330148
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6330246 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 6330148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 11572144 - 11572242
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11572144 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 11572242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 13853592 - 13853690
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13853592 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 13853690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 2830465 - 2830368
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 2830368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 8382969 - 8383066
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 8383066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 8099662 - 8099563
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  8099662 aatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacct 8099563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 8417793 - 8417890
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  8417793 tactcccttcggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacct 8417890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 9644828 - 9644729
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||    
T  9644828 aatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacct 9644729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 9650845 - 9650746
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||    
T  9650845 aatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacct 9650746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 33052792 - 33052891
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33052792 aatactccatccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 33052891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 35031000 - 35031098
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35031000 atacttcctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 35031098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 161 - 256
Target Start/End: Original strand, 28747133 - 28747228
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  28747133 atactcccttcagtcctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttga 28747228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 6068697 - 6068599
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  6068697 atactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacct 6068599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 6143689 - 6143587
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||| |||||| | |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  6143689 aatactactccttccggttctatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttga 6143590  T
Q  257 cct 259  Q
    |||    
T  6143589 cct 6143587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 17992118 - 17992021
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||| |||||||    
T  17992118 tactcccttcggtcctatttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacct 17992021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 22896593 - 22896513
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatac 241  Q
    ||||||||  ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||    
T  22896593 atactcccgccggtcctatttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac 22896513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 3788168 - 3788093
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtcca 236  Q
    ||||||||| ||||| ||||||||||| || ||| ||||||||||||||||| ||| ||||||| |||||||||||    
T  3788168 atactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagtcca 3788093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 13043850 - 13043791
Alignment:
Q  200 aacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacct 13043791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 7596989 - 7597069
Alignment:
Q  174 tcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgtt 254  Q
    ||||||||||| ||||| |||| ||||| |||||||||| ||| |||||||||||||||| |  ||||||  |||||||||    
T  7596989 tcctatttataggagaaatttgagtcaataaaagttgatgtatttagttaaaaattcagttcggatacatcaacttttgtt 7597069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 6068974 - 6069037
Alignment:
Q  196 ggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||||| |||  |||| ||||||||||| || ||||||||||| ||||||||||||||    
T  6068974 ggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacct 6069037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 13853728 - 13853677
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  13853728 aataatactaccttcggtcctatttataagagaaatttaggtcaacaaaagt 13853677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 3421706 - 3421645
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctag 220  Q
    |||||||||||  ||||||| ||||||| |||  ||| ||||||||||||||||||||||||    
T  3421706 taatactcccttaggtcctacttataagtgaaagttgagtcaacaaaagttgatatatctag 3421645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 8383102 - 8383053
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  8383102 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 8383053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 3421588 - 3421668
Alignment:
Q  177 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    ||||||||||| || |||| ||||||||||||||||||||||  ||||||| ||| || | ||| ||  ||||||||||||    
T  3421588 tatttataagaaaaatttgagtcaacaaaagttgatatatcttattaaaaaatcaatctagatatatcaacttttgttgac 3421668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 8186497 - 8186441
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    |||||||  ||||||||||||||| |||| ||||| ||||||||||||||| |||||    
T  8186497 tactccccccggtcctatttataaaagaaatttggatcaacaaaagttgatgtatct 8186441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 8417929 - 8417877
Alignment:
Q  156 taataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||||||||  |||| |||||||||||||| ||| |||||||||||||    
T  8417929 taataatactccctctggtcttatttataagagaaatttaggtcaacaaaagt 8417877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 33052926 - 33052878
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  33052926 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 33052878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 2830334 - 2830381
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  2830334 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 2830381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 8099529 - 8099576
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  8099529 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 8099576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 11572276 - 11572229
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  11572276 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 11572229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 3788033 - 3788075
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaa 201  Q
    |||||||||||||| |||||||||||||||||  |||||||||    
T  3788033 taatactccctacgatcctatttataagagaaagttgggtcaa 3788075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 6330115 - 6330161
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  6330115 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 6330161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 26602323 - 26602369
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  26602323 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 26602369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 14936456 - 14936553
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||||  |||||||| || |||| |  ||| |||||||||||| |||| ||||||||||| ||||   |||||||||||  ||| |||||||||    
T  14936456 atactccctctggtcctatatagaagaaacatttaggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacc 14936553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 14936590 - 14936537
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgat 212  Q
    ||||| |||||  ||||||||||||||||||  ||||||||||||| |||||||    
T  14936590 taataatccctctggtcctatttataagagatatttgggtcaacaatagttgat 14936537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 22896471 - 22896512
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaaca 203  Q
    |||||||| |||||||||||||||||||| ||| ||||||||    
T  22896471 tactccctccggtcctatttataagagaagtttaggtcaaca 22896512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 7240884 - 7240782
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7240884 aataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 7240785  T
Q  257 cct 259  Q
    |||    
T  7240784 cct 7240782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 23314139 - 23314236
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23314139 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 23314236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 1738444 - 1738544
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1738444 taatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 1738543  T
Q  259 t 259  Q
    |    
T  1738544 t 1738544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 7482360 - 7482258
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  7482360 aataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttga 7482261  T
Q  257 cct 259  Q
    |||    
T  7482260 cct 7482258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 9268887 - 9268789
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9268887 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 9268789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 46840990 - 46840893
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 46840893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 38063910 - 38064010
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38063910 taatactccctctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 38064009  T
Q  259 t 259  Q
    |    
T  38064010 t 38064010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 1565728 - 1565826
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1565728 atactcccttcggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 1565826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 22285829 - 22285732
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacct 22285732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 31319399 - 31319496
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31319399 tactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 31319496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 36583528 - 36583428
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  36583528 taatactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacc 36583429  T
Q  259 t 259  Q
    |    
T  36583428 t 36583428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 94318 - 94415
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  94318 tactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacct 94415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 33418497 - 33418409
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  33418497 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacct 33418409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 36016206 - 36016293
Alignment:
Q  172 ggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  36016206 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacct 36016293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 38441590 - 38441495
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  38441590 tacttcctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgac 38441495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 28536750 - 28536848
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  28536750 atactccctccggtcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacct 28536848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 4790379 - 4790281
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  4790379 atacttcctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacct 4790281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 9575539 - 9575443
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||| ||||||||||||||||||||  || ||||||||||| ||||| ||||||||||||||||||||| |||||| || |||||||||||||    
T  9575539 tactcccttcggtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacc 9575443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 40840128 - 40840211
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgtt 254  Q
    |||||||||||||||||||| |||  |||||||||||||||| ||  ||||||||||||||||||||||||||| | |||||||    
T  40840128 cggtcctatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgtt 40840211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 7269414 - 7269501
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||||||||||||  |||||| |||||||||||||  |||| ||||||||||||||  | ||||||  | |||||||||||    
T  7269414 cggtcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacc 7269501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 22285695 - 22285745
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  22285695 ataatactccctccggtcctatttataagagaaatttaggtcaacaaaagt 22285745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 1738584 - 1738531
Alignment:
Q  155 ttaataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  1738584 ttaataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 1738531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 29993253 - 29993302
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctag 220  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  29993253 cggtcctatttgtaagagaatgttgggtcaacaaaagttaatatatctag 29993302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 7661207 - 7661147
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagt 221  Q
    |||||||||  ||||||||||||| ||||  ||||||||||||||||||||| ||||||||    
T  7661207 atactccctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagt 7661147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 7240745 - 7240795
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  7240745 ataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 7240795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 36016326 - 36016280
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  36016326 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 36016280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 1565861 - 1565813
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  1565861 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 1565813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 46840858 - 46840906
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  46840858 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 46840906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 7482224 - 7482271
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  7482224 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 7482271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 28536882 - 28536835
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  28536882 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 28536835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 38064044 - 38063997
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  38064044 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 38063997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 9268752 - 9268802
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| |||  ||||||||||||||||||| ||| |||||||||||||    
T  9268752 ataatactacctctggtcctatttataagagaaatttaggtcaacaaaagt 9268802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 23314269 - 23314223
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  23314269 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 23314223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 31319529 - 31319483
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  31319529 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 31319483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 36583395 - 36583441
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  36583395 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 36583441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 94439 - 94402
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  94439 cggtcctatttataagagaaatttaggtcaacaaaagt 94402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 7269535 - 7269478
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatcta 219  Q
    |||||||| ||||| ||||||||||| ||  |||||||||||||| ||||| ||||||    
T  7269535 tactccctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatcta 7269478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 9575407 - 9575456
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagtt 209  Q
    ||||||||||  |||||||||| ||||||||  |||||||||||||||||    
T  9575407 aatactccctctggtcctatttgtaagagaaagttgggtcaacaaaagtt 9575456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 9395485 - 9395383
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9395485 aataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 9395386  T
Q  257 cct 259  Q
    |||    
T  9395385 cct 9395383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 41989405 - 41989504
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41989405 aatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 41989504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 13103159 - 13103057
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  13103159 aataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttga 13103060  T
Q  257 cct 259  Q
    |||    
T  13103059 cct 13103057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 36563537 - 36563635
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36563537 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 36563635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 11795299 - 11795201
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11795299 atactccctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 11795201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 13033186 - 13033084
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  13033186 aataatactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttga 13033087  T
Q  257 cct 259  Q
    |||    
T  13033086 cct 13033084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 23360072 - 23359975
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 23359975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 37148955 - 37149052
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37148955 tactccctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 37149052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 21576077 - 21575979
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  21576077 atactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacct 21575979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 6126954 - 6126860
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  6126954 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttga 6126860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 17025755 - 17025657
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| |||||    
T  17025755 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacct 17025657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 26350348 - 26350447
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| ||||||||||||||| |||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26350348 aatactccctccggtcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 26350447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 161 - 251
Target Start/End: Complemental strand, 37642085 - 37641995
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcactttt 251  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  37642085 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttt 37641995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 20848203 - 20848107
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  20848203 tactccctccggtcctatttataagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacct 20848107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 4444087 - 4443993
Alignment:
Q  165 tccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||| ||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  4444087 tccctccggtcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacct 4443993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 583099 - 583022
Alignment:
Q  182 ataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  583099 ataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacct 583022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 2366352 - 2366419
Alignment:
Q  176 ctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 243  Q
    ||||||||||||||| ||||||||||||| |||| || ||| | ||||||| ||||||||||||||||    
T  2366352 ctatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacat 2366419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 966281 - 966184
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||| |||| | |||||||||||||||||| ||||| ||||||||| |  || ||||| ||||||||||||||| | ||||||  ||| |||||||    
T  966281 taataccccctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtcaagatacatgaactgttgttga 966184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 38361743 - 38361788
Alignment:
Q  214 tatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcacttttattgacct 38361788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 9006894 - 9006949
Alignment:
Q  174 tcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaatt 229  Q
    |||||||||||| ||| |||| ||||||||||||||||| ||||||||| ||||||    
T  9006894 tcctatttataacagacttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 37149090 - 37149039
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  37149090 aataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 37149039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 35904530 - 35904448
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 243  Q
    |||||||| || ||||| ||||||| ||||||  ||  ||||||||||||  || ||| ||||||||||||||||||||||||||    
T  35904530 taatactctcttcggtcttatttattagagaaaatttagtcaacaaaagt--atgtatttagttaaaaattcagtccaaatacat 35904448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 36595783 - 36595856
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacatt 244  Q
    ||||| ||||||||||||||  || ||||||||||| ||||| |||||  |||||||||||||| | |||||||    
T  36595783 cggtcttatttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaattcagtctagatacatt 36595856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 4443958 - 4444006
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  4443958 aatacttccttcggtcctatttataagagaaatttaggtcaacaaaagt 4444006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 259
Target Start/End: Complemental strand, 39290891 - 39290807
Alignment:
Q  175 cctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||||||||  | |  |||||||||||| || |||||| ||||||||| | |||||||||||  | ||||||||||||    
T  39290891 cctatttataagagaaagtcgaatcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacct 39290807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 582984 - 583035
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| ||| |||||||||||||||||||| ||| |||||||| ||||    
T  582984 aataatactacctccggtcctatttataagagaaatttaggtcaacataagt 583035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 9395345 - 9395396
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  9395345 aatattactacctccggtcctatttataagagaaatttaggtcaacaaaagt 9395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 13033050 - 13033097
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  13033050 atacttcctccggtcctatttataagagaaatttaggtcaacaaaagt 13033097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 13103023 - 13103070
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  13103023 atacttcctccggtcctatttataagagaaatttaggtcaacaaaagt 13103070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 3549556 - 3549642
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    |||||||||||||||||||| |||   | ||||||||||||| |||   |||||||||| || ||| ||||||| | ||||||||||    
T  3549556 cggtcctatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgac 3549642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 26350480 - 26350434
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| || ||||||||||||||||| ||| |||||||||||||    
T  26350480 tactccctccgatcctatttataagagaaatttaggtcaacaaaagt 26350434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 20848071 - 20848120
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||| ||||||    
T  20848071 taatactacctccggtcctatttataagagaaatttaggtcaataaaagt 20848120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 37641948 - 37641997
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaa 206  Q
    ||||||||| ||| |||||||||||||||||||| ||| |||||| ||||    
T  37641948 aataatactacctccggtcctatttataagagaaatttaggtcaataaaa 37641997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 11574210 - 11574154
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    ||||| || |||||||||||||||||||  ||| ||||||||||| |||| ||||||    
T  11574210 tactctctccggtcctatttataagagacatttaggtcaacaaaaattgaaatatct 11574154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 17025622 - 17025670
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||| ||||||||    
T  17025622 aatactacctccggtcctatttataagagaaatttaggtccacaaaagt 17025670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 23359952 - 23359988
Alignment:
Q  172 ggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  23359952 ggtcctatttataagagaaatttaggtcaacaaaagt 23359988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 36563670 - 36563622
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| || ||||||||||||||||| ||| |||||||||||||    
T  36563670 aatactacctccgatcctatttataagagaaatttaggtcaacaaaagt 36563622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 46797855 - 46797758
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46797855 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 46797758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 48336398 - 48336296
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48336398 aataatactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 48336299  T
Q  257 cct 259  Q
    |||    
T  48336298 cct 48336296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 47833741 - 47833644
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47833741 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 47833644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 47838612 - 47838713
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47838612 aataatactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 47838711  T
Q  257 cc 258  Q
    ||    
T  47838712 cc 47838713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 33621929 - 33621829
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33621929 taatactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 33621830  T
Q  259 t 259  Q
    |    
T  33621829 t 33621829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 6121893 - 6121987
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6121893 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 6121987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 53337501 - 53337403
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53337501 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 53337403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 3372251 - 3372154
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3372251 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 3372154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 3993107 - 3993010
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3993107 atactccctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 3993010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 20538686 - 20538783
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20538686 tactccctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 20538783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 42797862 - 42797765
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 42797765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 5987009 - 5986909
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  5987009 taatactctctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 5986910  T
Q  259 t 259  Q
    |    
T  5986909 t 5986909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 41469763 - 41469863
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  41469763 taatactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacc 41469862  T
Q  259 t 259  Q
    |    
T  41469863 t 41469863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 3422196 - 3422094
Alignment:
Q  156 taataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttg 255  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  3422196 taataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttg 3422098  T
Q  256 acct 259  Q
    ||||    
T  3422097 acct 3422094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 3904682 - 3904780
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  3904682 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacct 3904780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 24704501 - 24704403
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  24704501 atactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 24704403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 51894577 - 51894679
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  51894577 aatattactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttga 51894676  T
Q  257 cct 259  Q
    |||    
T  51894677 cct 51894679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 52756806 - 52756708
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  52756806 atactcccttcggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacct 52756708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 40913190 - 40913283
Alignment:
Q  163 actccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40913190 actccctccggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttga 40913283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 43900679 - 43900582
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43900679 tacttcctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacct 43900582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 7579440 - 7579343
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||    
T  7579440 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacct 7579343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 26231688 - 26231610
Alignment:
Q  181 tataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26231688 tataagagaattttcggtttacaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacct 26231610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 33551312 - 33551234
Alignment:
Q  181 tataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacct 33551234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 41615676 - 41615773
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||| | ||||||||||||||||||||  |||| ||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||    
T  41615676 tactccatccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacct 41615773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 50430431 - 50430514
Alignment:
Q  175 cctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||||| |  ||||||||||||||| ||||| ||||| |||||||||||| |||||||||||  |||||||||||||    
T  50430431 cctatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacc 50430514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 17344345 - 17344249
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||||||| |  || |||||||||||||| ||||| ||||||||||||||| ||||   ||||||||||||| || ||||||  |||||||||||    
T  17344345 aatactccctccaatcttatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttga 17344249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 25855182 - 25855118
Alignment:
Q  193 ttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    ||||||| |||||||| ||| ||| | ||||||||||||||||||||||||| ||||||||||||    
T  25855182 ttgggtctacaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgac 25855118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 4780425 - 4780358
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaatt 229  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||||| || |||||  |||||||||    
T  4780425 tactccctccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaaaaatt 4780358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 43900547 - 43900595
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  43900547 aatactccctccggtcctatttataagagaaatttaggtcaacaaaagt 43900595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 44900080 - 44900136
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    |||||||| |||||||||||||||||||  ||  |||||||||||||||||||||||    
T  44900080 tactccctccggtcctatttataagagatattctggtcaacaaaagttgatatatct 44900136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 17236919 - 17236868
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgat 212  Q
    |||||| || ||||||||||||||||| || |||||||||||||||||||||    
T  17236919 atactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgat 17236868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 45478210 - 45478151
Alignment:
Q  174 tcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagt 233  Q
    ||||||||||||||||| | |||||||| |||||||||| ||||  ||||||||||||||    
T  45478210 tcctatttataagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattcagt 45478151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 47833606 - 47833657
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  47833606 aataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 47833657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 48336259 - 48336309
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  48336259 ataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 48336309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 3372118 - 3372167
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  3372118 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 3372167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 3992973 - 3993022
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  3992973 taatactacctccggtcctatttataagagaaatttcggtcaacaaaagt 3993022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 33551200 - 33551247
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  33551200 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 33551247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 40913320 - 40913273
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| |||||||||||||||||||| ||| | |||||||||||    
T  40913320 atactccctccggtcctatttataagagaaatttagatcaacaaaagt 40913273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 20538816 - 20538770
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  20538816 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 20538770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 24704370 - 24704416
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  24704370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 24704416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 26231576 - 26231622
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaag 207  Q
    ||||| ||| |||||||||||||||||||| ||| ||||||||||||    
T  26231576 atactacctccggtcctatttataagagaaatttaggtcaacaaaag 26231622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 51894716 - 51894666
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| ||| ||||||||||||||||| || ||| |||||||||||||    
T  51894716 ataatactacctccggtcctatttataagaaaaatttaggtcaacaaaagt 51894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 53337370 - 53337416
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  53337370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 53337416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 42797729 - 42797778
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| ||||||||| |||||||||| ||| |||||||||||||    
T  42797729 taatactacctccggtcctatatataagagaaatttaggtcaacaaaagt 42797778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 1716301 - 1716357
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    |||||||| ||||| |||||||||||||   || ||||||||||||||||| |||||    
T  1716301 tactccctccggtcttatttataagagataatttggtcaacaaaagttgatgtatct 1716357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 1716417 - 1716365
Alignment:
Q  174 tcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaa 226  Q
    ||||||||||||||||| ||| ||||||| |||||||||  |||| |||||||    
T  1716417 tcctatttataagagaagtttaggtcaaccaaagttgatgcatctggttaaaa 1716365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 6422582 - 6422530
Alignment:
Q  177 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaatt 229  Q
    |||||||||||||  ||| ||||||||||| ||||||||| ||||| ||||||    
T  6422582 tatttataagagatatttaggtcaacaaaaattgatatatttagtttaaaatt 6422530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 31013117 - 31013057
Alignment:
Q  196 ggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||||||||| |||| ||||||||||| |||| |  ||||||||||  |||||||||||    
T  31013117 ggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttga 31013057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 41469898 - 41469850
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| ||||||||||||||| |||| ||| |||||||||||||    
T  41469898 aatacttccttcggtcctatttataaaagaaatttaggtcaacaaaagt 41469850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 45725977 - 45725905
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 243  Q
    ||||||||||||||||||||  ||  ||||||||||||| |  ||| ||||||| |||| |||| ||||||||    
T  45725977 cggtcctatttataagagaaagtttcgtcaacaaaagttaacgtatttagttaagaatttagtctaaatacat 45725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 7785775 - 7785875
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7785775 taatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 7785874  T
Q  259 t 259  Q
    |    
T  7785875 t 7785875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 54611 - 54709
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54611 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 54709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 2890161 - 2890259
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2890161 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 2890259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 6552785 - 6552688
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6552785 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 6552688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 44498183 - 44498284
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44498183 ataatactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 44498282  T
Q  258 ct 259  Q
    ||    
T  44498283 ct 44498284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 7805696 - 7805796
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7805696 taatactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 7805795  T
Q  259 t 259  Q
    |    
T  7805796 t 7805796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 39571201 - 39571297
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39571201 aatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 39571297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 12763652 - 12763751
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12763652 aatactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 12763751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 25600999 - 25601097
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  25600999 atactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 25601097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 43199353 - 43199451
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43199353 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 43199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 3304278 - 3304375
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3304278 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 3304375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 32114473 - 32114572
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32114473 aatactccctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 32114572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 32211361 - 32211460
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  32211361 aatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacct 32211460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 33289261 - 33289355
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  33289261 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttga 33289355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 31654743 - 31654646
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31654743 tacttcctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 31654646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 12343149 - 12343237
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12343149 cggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 12343237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 15888350 - 15888449
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| | || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  15888350 aatactccctccagttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacct 15888449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 7012303 - 7012207
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  7012303 aatacttcctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttga 7012207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 13578972 - 13578890
Alignment:
Q  177 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  13578972 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacct 13578890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 27422325 - 27422239
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 243  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||| |  || ||||| ||||||||||||||||||||||||    
T  27422325 aataatactcccttcggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacat 27422239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 8587301 - 8587204
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||| ||| ||||| ||||||||||||||  ||| ||||| |||||||||| |||||||||||||||| |||| ||||||||  |||||||||||||    
T  8587301 atacttcctccggtcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgacc 8587204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 28463742 - 28463645
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||| || ||||||||||   ||||| |||||||| | ||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||    
T  28463742 atactccctccgatcctatttattgcagaatattgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacc 28463645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 24691988 - 24692075
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||||||| ||| |||||||||| || ||||||  ||||||||||||||    
T  24691988 cggtcctatttttaaaagaaatttgggtcaacaaaagttgatatatctggtt-aaaattcagttcagatacatcaacttttgttgacct 24692075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 54747 - 54696
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  54747 aataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 54696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 8587165 - 8587220
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgat 212  Q
    |||| |||||||| ||||||||||||||||||||  || |||||||||||||||||    
T  8587165 aatagtactccctccggtcctatttataagagaaagtttggtcaacaaaagttgat 8587220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 31654613 - 31654659
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  31654613 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 31654659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 2890295 - 2890246
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  2890295 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 2890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 17007026 - 17006945
Alignment:
Q  177 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||||||||| |||  ||||| |||||||||| |||||  |||| ||||||||||| || |||  |||||||||||||    
T  17007026 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacc 17006945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 17570221 - 17570302
Alignment:
Q  177 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||||||||| |||  ||||| |||||||||| |||||  |||| ||||||||||| || |||  |||||||||||||    
T  17570221 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacc 17570302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 28463620 - 28463661
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgat 212  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  28463620 cggtcctatttataagagaaagttgggtcaacaaaagttgat 28463661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 4245713 - 4245665
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  4245713 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 4245665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 7785910 - 7785862
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  7785910 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 7785862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 7805831 - 7805783
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  7805831 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 7805783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 15688039 - 15688086
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    ||||||| ||||||||||||  |||||||||||||||||||| |||||    
T  15688039 cggtcctgtttataagagaaagttgggtcaacaaaagttgatgtatct 15688086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 17006914 - 17006961
Alignment:
Q  165 tccctacggtcctatttataagagaattttgggtcaacaaaagttgat 212  Q
    ||||| || |||||||||||||||||  ||||||||||||||||||||    
T  17006914 tccctccgatcctatttataagagaaagttgggtcaacaaaagttgat 17006961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 17570333 - 17570286
Alignment:
Q  165 tccctacggtcctatttataagagaattttgggtcaacaaaagttgat 212  Q
    ||||| || |||||||||||||||||  ||||||||||||||||||||    
T  17570333 tccctccgatcctatttataagagaaagttgggtcaacaaaagttgat 17570286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 35564706 - 35564757
Alignment:
Q  178 atttataagagaattttgggtcaacaaaagttgatatatctagttaaaaatt 229  Q
    |||||||||||| ||||| |||||||||| ||||| ||||||||| ||||||    
T  35564706 atttataagagatttttgagtcaacaaaatttgatgtatctagttcaaaatt 35564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 43199485 - 43199438
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  43199485 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 43199438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 3304408 - 3304362
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  3304408 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 3304362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 6552655 - 6552701
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  6552655 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 6552701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 12343270 - 12343224
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  12343270 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 12343224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 15888482 - 15888436
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  15888482 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 15888436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 24692110 - 24692052
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    |||||||||| || |||||||||||||| ||  || ||||||||||||||||| |||||    
T  24692110 aatactcccttcgatcctatttataagaaaaagttaggtcaacaaaagttgatgtatct 24692052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 30171483 - 30171529
Alignment:
Q  163 actccctacggtcctatttataagagaattttgggtcaacaaaagtt 209  Q
    ||||||| || ||||||||| |||||||||||| |||||||||||||    
T  30171483 actccctccgatcctatttacaagagaattttgagtcaacaaaagtt 30171529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 32114605 - 32114559
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  32114605 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 32114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 33057725 - 33057655
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattca 231  Q
    ||||||| | ||||| ||||||||||||||  || ||||||||||| ||||| ||||| ||||||| ||||    
T  33057725 atactccatccggtcttatttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttca 33057655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 44498317 - 44498271
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  44498317 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44498271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 259
Target Start/End: Original strand, 4245649 - 4245678
Alignment:
Q  230 cagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||||||||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacct 4245678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 32211494 - 32211449
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaa 206  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||    
T  32211494 atactacctccggtcctatttataagagaaatttaggtcaacaaaa 32211449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 33057589 - 33057638
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaa 206  Q
    ||||||||||||| ||||||||||||||||| ||  |||| |||||||||    
T  33057589 aataatactccctccggtcctatttataagacaaagttggatcaacaaaa 33057638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 41478636 - 41478736
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41478636 taatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 41478735  T
Q  259 t 259  Q
    |    
T  41478736 t 41478736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 3055690 - 3055591
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3055690 aatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 3055591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 37990011 - 37990110
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37990011 aatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 37990110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 13197705 - 13197807
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13197705 aatactactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 13197804  T
Q  257 cct 259  Q
    |||    
T  13197805 cct 13197807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 16243778 - 16243880
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16243778 aataatactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 16243877  T
Q  257 cct 259  Q
    |||    
T  16243878 cct 16243880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 44398817 - 44398719
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44398817 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 44398719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 15896972 - 15896875
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 15896875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 9047752 - 9047852
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  9047752 taatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacc 9047851  T
Q  259 t 259  Q
    |    
T  9047852 t 9047852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 6648514 - 6648616
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||    
T  6648514 aataatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttga 6648613  T
Q  257 cct 259  Q
    |||    
T  6648614 cct 6648616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 38917521 - 38917619
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  38917521 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacct 38917619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 44397678 - 44397580
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44397678 atactccccccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 44397580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 12337937 - 12338034
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacct 12338034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 15372356 - 15372259
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacct 15372259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 37666607 - 37666707
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  37666607 taatactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacc 37666706  T
Q  259 t 259  Q
    |    
T  37666707 t 37666707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 41492893 - 41492993
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  41492893 taatactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacc 41492992  T
Q  259 t 259  Q
    |    
T  41492993 t 41492993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 13344615 - 13344517
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  13344615 atactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacct 13344517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 16044317 - 16044414
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  16044317 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacct 16044414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 30099181 - 30099279
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||    
T  30099181 atactccctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacct 30099279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 44804581 - 44804675
Alignment:
Q  165 tccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||| ||||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||    
T  44804581 tccctccggtcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacct 44804675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 4683951 - 4684029
Alignment:
Q  181 tataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4683951 tataagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 4684029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 12170414 - 12170496
Alignment:
Q  177 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||    
T  12170414 tatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacct 12170496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 16734902 - 16734817
Alignment:
Q  173 gtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||||||||||  ||| || ||||||||||||| ||| | ||||||||||||||||| ||||||  |||||||||||||    
T  16734902 gtcctatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgacc 16734817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 31150771 - 31150688
Alignment:
Q  169 tacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    ||||||||||||||||||||||   ||||||||||||  |||   |||||||||||||||| |||||||||||||  ||||||||||||    
T  31150771 tacggtcctatttataagagaaacatgggtcaacaaa--ttg---tatctagttaaaaatttagtccaaatacataaacttttgttgac 31150688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 41453149 - 41453092
Alignment:
Q  202 caaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||| ||| | ||||||||||||||||||||||||| |||||| |||||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacct 41453092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 15372221 - 15372272
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||||||| | |||||||||||||||||| ||| |||||||||||||    
T  15372221 aataatactccctccagtcctatttataagagaaatttaggtcaacaaaagt 15372272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 13724102 - 13724198
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||| |||||||||||| ||||||  | | ||||||||||||||||| ||| | |||||||| |  | ||| ||||||  |||||||||||||    
T  13724102 tactccctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgacc 13724198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 37990145 - 37990097
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  37990145 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 37990097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 41478771 - 41478723
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  41478771 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 41478723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 3055557 - 3055604
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  3055557 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 3055604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 4684063 - 4684016
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  4684063 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 4684016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 15896841 - 15896888
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  15896841 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 15896888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 23227407 - 23227352
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgat 212  Q
    ||||||||| ||| | |||||||||||||||||  ||| |||||||||||||||||    
T  23227407 aataatacttccttcagtcctatttataagagacattttggtcaacaaaagttgat 23227352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 44397546 - 44397593
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  44397546 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44397593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 44398685 - 44398732
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  44398685 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44398732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 13197840 - 13197794
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  13197840 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 13197794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 13724234 - 13724176
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    |||||||||||| |||||||||||||| ||  ||  ||||||||||||||||| |||||    
T  13724234 aatactccctacagtcctatttataagcgatattctggtcaacaaaagttgatgtatct 13724176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 16044447 - 16044401
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  16044447 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 16044401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 37666740 - 37666694
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  37666740 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 37666694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 13775864 - 13775832
Alignment:
Q  158 ataatactccctacggtcctatttataagagaa 190  Q
    |||||||||||| ||||||||||||||||||||    
T  13775864 ataatactccctccggtcctatttataagagaa 13775832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 14984970 - 14984870
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14984970 taatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 14984871  T
Q  259 t 259  Q
    |    
T  14984870 t 14984870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 9981782 - 9981680
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9981782 aataatattccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 9981683  T
Q  257 cct 259  Q
    |||    
T  9981682 cct 9981680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 27159358 - 27159455
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27159358 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 27159455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 31842795 - 31842892
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 31842892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 39401966 - 39402063
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 39402063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 44668093 - 44668190
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44668093 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 44668190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 47216698 - 47216796
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47216698 atactccctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 47216796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 11796063 - 11795966
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacct 11795966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 26471065 - 26471162
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26471065 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 26471162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 47777481 - 47777578
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacct 47777578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 1051020 - 1050921
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  1051020 aatactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacct 1050921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 34042828 - 34042729
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  34042828 aatactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacct 34042729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 12483625 - 12483725
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||    
T  12483625 taatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacc 12483724  T
Q  259 t 259  Q
    |    
T  12483725 t 12483725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 44955215 - 44955303
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44955215 cggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 44955303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 47588334 - 47588434
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  47588334 taatactcccttcggttttatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacc 47588433  T
Q  259 t 259  Q
    |    
T  47588434 t 47588434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 25694450 - 25694355
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  25694450 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattga 25694355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 47969830 - 47969728
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| ||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  47969830 aataatactccctccggtcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttga 47969731  T
Q  257 cct 259  Q
    |||    
T  47969730 cct 47969728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 17556884 - 17556785
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaataca-ttcacttttgttgacct 259  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  17556884 atactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacct 17556785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 23278021 - 23278098
Alignment:
Q  182 ataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacct 23278098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 11897186 - 11897087
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||  |||||||||||||| || ||||||  ||||||||||||||    
T  11897186 aatactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacct 11897087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 37552272 - 37552176
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    ||||||||  |||||||||||||||||||| ||||||||||||||| |  || ||||| ||||||||||||||||| ||||||  ||| ||||||||    
T  37552272 atactccccccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgac 37552176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 12213484 - 12213571
Alignment:
Q  172 ggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||||| ||||||  |||||||||||||| ||||| ||| |||||||||||||| || ||||||||| | ||||||||||||    
T  12213484 ggtcctatttattagagaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacct 12213571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 11989911 - 11989815
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||| ||||||||||||||| |||| |||| ||||| |||| ||||| ||| | ||||||||||||||||||||| |||   |||||||||||    
T  11989911 tactccctccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacc 11989815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 16448108 - 16448204
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||| || ||||| |||||||| | |||| ||||||||||||||||| || ||||| ||| ||||||||||||| ||||||  |||||||||||||    
T  16448108 tactcactccggtcttatttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacc 16448204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 16448239 - 16448182
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||    
T  16448239 atactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatct 16448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 11897053 - 11897110
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    ||||||||| ||||||||||||||||||||  || ||||||||||||||||| |||||    
T  11897053 atactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatct 11897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 27159492 - 27159442
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  27159492 ataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 27159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 44668227 - 44668177
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  44668227 ataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44668177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 571622 - 571542
Alignment:
Q  177 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||| |||||| || | |||||||||||| || || |||||| ||||||||||| ||||||| | |||||||||||||    
T  571622 tatttataggagaatatttgatcaacaaaagttaatgtacctagttcaaaattcagtctaaataca-taacttttgttgacc 571542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 1598394 - 1598461
Alignment:
Q  174 tcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 243  Q
    ||||||||||||||||| | ||| ||||||||| ||||| ||| | ||||||||||||||||||||||||    
T  1598394 tcctatttataagagaaatatgg-tcaacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 12483761 - 12483712
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  12483761 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 12483712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 26471198 - 26471149
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  26471198 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 26471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 11795931 - 11795979
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  11795931 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 11795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 9981646 - 9981693
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  9981646 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 9981693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 12069614 - 12069535
Alignment:
Q  164 ctccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 243  Q
    |||| ||||||| ||||||||||||||  ||| ||  | |||||||||| ||||  ||||||||||||||| ||||||||    
T  12069614 ctccttacggtcttatttataagagaaaattgagttgataaaagttgatttatcaggttaaaaattcagtctaaatacat 12069535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 1050888 - 1050934
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  1050888 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 1050934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 31842925 - 31842879
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  31842925 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 31842879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 39402096 - 39402050
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  39402096 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 39402050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 47216829 - 47216783
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  47216829 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 47216783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 14984846 - 14984883
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  14984846 cggtcctatttataagagaaatttaggtcaacaaaagt 14984883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 34042695 - 34042740
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaa 206  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||    
T  34042695 atactacctccggtcctatttataagagaaatttaggtcaacaaaa 34042740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 47777602 - 47777565
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  47777602 cggtcctatttataagagaaatttaggtcaacaaaagt 47777565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 12047223 - 12047155
Alignment:
Q  176 ctatttataagagaattttgggtcaacaaaagttgatatatctagtt-aaaaattcagtccaaatacat 243  Q
    ||||||||||||||| ||||| |||| |||  ||||| |||| |||| |||||||||||| ||||||||    
T  12047223 ctatttataagagaaatttggatcaataaagattgatgtatccagttaaaaaattcagtctaaatacat 12047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 17556751 - 17556799
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagtt 209  Q
    |||||||||  |||||||||||||||||||  || ||||||||||||||    
T  17556751 atactccctctggtcctatttataagagaaagttaggtcaacaaaagtt 17556799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 23278131 - 23278087
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaa 206  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||    
T  23278131 tactacctccggtcctatttataagagaaatttaggtcaacaaaa 23278087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 30800556 - 30800460
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    ||||||||| || || |||||| | |||||  |||||| ||||||||||||| |||||  || ||||||||||  | ||||||  ||||||||||||    
T  30800556 atactcccttcgatcttatttacatgagaacgttgggttaacaaaagttgatgtatctgattcaaaattcagtatagatacatcaacttttgttgac 30800460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 45871214 - 45871258
Alignment:
Q  174 tcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    ||||||||||||||||  |||| ||||||| ||||||||||||||    
T  45871214 tcctatttataagagatgtttgagtcaacagaagttgatatatct 45871258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 9e-45; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 8817380 - 8817483
Alignment:
Q  156 taataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttg 255  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8817380 taataatactccttccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttg 8817479  T
Q  256 acct 259  Q
    ||||    
T  8817480 acct 8817483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 10298111 - 10298012
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10298111 aatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 10298012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 49823380 - 49823478
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49823380 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 49823478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 19557052 - 19557149
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 19557149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 48340527 - 48340430
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 48340430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 17653844 - 17653745
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17653844 aatactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 17653745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 40690994 - 40691093
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  40690994 aatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacct 40691093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 22722062 - 22721964
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22722062 atactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 22721964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 37509052 - 37508954
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37509052 atactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 37508954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 51406804 - 51406706
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  51406804 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 51406706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 2787832 - 2787929
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2787832 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 2787929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 34080030 - 34080127
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacct 34080127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 4238725 - 4238627
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4238725 atactacctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 4238627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 6013331 - 6013433
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  6013331 aatattactccctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttga 6013430  T
Q  257 cct 259  Q
    |||    
T  6013431 cct 6013433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 8437556 - 8437458
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  8437556 atactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacct 8437458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 9111497 - 9111591
Alignment:
Q  165 tccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  9111497 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacct 9111591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 38964522 - 38964428
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38964522 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 38964428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 42507358 - 42507452
Alignment:
Q  165 tccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  42507358 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacct 42507452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 46208161 - 46208063
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  46208161 atactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacct 46208063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 21295326 - 21295423
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  21295326 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacct 21295423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 44785396 - 44785493
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44785396 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 44785493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 36095678 - 36095777
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||| || ||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36095678 aatactcactccggtcttatttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 36095777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 42170356 - 42170443
Alignment:
Q  172 ggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  42170356 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacct 42170443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 33942944 - 33943029
Alignment:
Q  174 tcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  33942944 tcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacct 33943029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 35513608 - 35513506
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||| |||||||| || |||||||||||| |||||| ||| |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  35513608 aatactactccctccgatcctatttataaaagaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 35513509  T
Q  257 cct 259  Q
    |||    
T  35513508 cct 35513506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 9027140 - 9027197
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatc 217  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||||||||||| ||||    
T  9027140 aatactccctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatc 9027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 34988074 - 34988131
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    ||||||||| ||||||||||||| |||||  ||||||||||||||||||||| |||||    
T  34988074 atactcccttcggtcctatttattagagacatttgggtcaacaaaagttgatctatct 34988131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 34988205 - 34988140
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaa 227  Q
    |||||||| ||||||||||||||||| |  |||| |||||||| ||||||| ||||||||||||||    
T  34988205 tactccctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaa 34988140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 4238589 - 4238640
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  4238589 aataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 4238640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 9213646 - 9213551
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    |||||||| | ||||||||||| |||||| ||| ||||||||||| ||||| ||| | |||| ||| | |||||| ||||||  ||||||||||||    
T  9213646 tactccctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgac 9213551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 46208029 - 46208076
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  46208029 atactccctccggtcctatttataagagaaatttaggtcaacaaaagt 46208076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 17653712 - 17653758
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  17653712 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 17653758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 22721927 - 22721977
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  22721927 ataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 22721977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 35513473 - 35513519
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  35513473 tactcccttcggtcctatttataagagaaatttaggtcaacaaaagt 35513519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 37508921 - 37508967
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||||    
T  37508921 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 37508967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 21295459 - 21295410
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  21295459 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 21295410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 21917688 - 21917749
Alignment:
Q  196 ggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 257  Q
    ||||||||||| || |||||||||||| ||||||||||||| || ||| | |||||||||||    
T  21917688 ggtcaacaaaaattaatatatctagttcaaaattcagtccacatgcatcctcttttgttgac 21917749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 34080163 - 34080114
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  34080163 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 34080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 2131802 - 2131746
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    |||||||| |||||||| |||| |||||  ||||||||||||||||||||| |||||    
T  2131802 tactccctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatct 2131746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 5323337 - 5323241
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagtt-aaaaattcagtccaaatacattcacttttgttgac 257  Q
    |||||||| || | |||||||||||  || ||||||||||||||||||||| ||| | ||| ||||||||| | ||||||||||   ||||||||||    
T  5323337 tactccctccgatactatttataagtaaaatttgggtcaacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgac 5323241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 8817518 - 8817470
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  8817518 aatactaccttcggtcctatttataagagaaatttaggtcaacaaaagt 8817470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 9111626 - 9111578
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  9111626 aatactaccttcggtcctatttataagagaaatttaggtcaacaaaagt 9111578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 44785528 - 44785480
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  44785528 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 44785480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 2787967 - 2787916
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||||  || |||||||||||||||||||| ||| |||||||||||||    
T  2787967 aataatactatctccggtcctatttataagagaaatttaggtcaacaaaagt 2787916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 19557183 - 19557136
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  19557183 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 19557136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 36095811 - 36095764
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| ||||||||||||||||| || ||| |||||||||||||    
T  36095811 atactccctccggtcctatttataagataaatttaggtcaacaaaagt 36095764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 38964387 - 38964438
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||||| ||| |||||||||||||||||||| ||| | |||||||||||    
T  38964387 aataatactacctccggtcctatttataagagaaatttagatcaacaaaagt 38964438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 49823512 - 49823465
Alignment:
Q  161 atactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  49823512 atactacctccggtcctatttataagagaaatttaggtcaacaaaagt 49823465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 9213514 - 9213572
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatct 218  Q
    |||||||||| ||||||||||||||| |||  |||  |||||||||||||||| |||||    
T  9213514 aatactccctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatct 9213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 10297979 - 10298025
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  10297979 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 10298025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 250
Target Start/End: Original strand, 26019478 - 26019568
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttt 250  Q
    |||||||| | || |||||||||||||||||  || ||||||| |||||| || ||||| ||| |||||| |||| | ||||||| |||||    
T  26019478 aatactccttccgatcctatttataagagaaaatttggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaacttt 26019568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 45652066 - 45652128
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagt 221  Q
    ||||||||||| | |||||||||||||||||  |||| |||||||||| | ||| ||||||||    
T  45652066 taatactccctccagtcctatttataagagacatttgagtcaacaaaaatggatgtatctagt 45652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 8437422 - 8437471
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| |||||||||||||||||||| ||| |||||| ||||||    
T  8437422 taatactacctccggtcctatttataagagaaatttaggtcaataaaagt 8437471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 8951954 - 8951987
Alignment:
Q  220 gttaaaaattcagtccaaatacattcacttttgt 253  Q
    ||||||||||||||||||||||||| ||||||||    
T  8951954 gttaaaaattcagtccaaatacattaacttttgt 8951987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 42170479 - 42170430
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| ||||| |||||||||||||| ||| |||||||||||||    
T  42170479 taatactacctccggtcttatttataagagaaatttaggtcaacaaaagt 42170430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 42507488 - 42507439
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    ||||||| ||| ||||||||||||||| |||| ||| |||||||||||||    
T  42507488 taatactacctccggtcctatttataatagaaatttaggtcaacaaaagt 42507439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 48729569 - 48729606
Alignment:
Q  192 tttgggtcaacaaaagttgatatatctagttaaaaatt 229  Q
    |||||||||||||||||||||||||||| || ||||||    
T  48729569 tttgggtcaacaaaagttgatatatctaattcaaaatt 48729606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 157 - 259
Target Start/End: Complemental strand, 23920 - 23818
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23920 aataatactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 23821  T
Q  257 cct 259  Q
    |||    
T  23820 cct 23818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 23781 - 23831
Alignment:
Q  158 ataatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  23781 ataatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 23831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 159 - 259
Target Start/End: Complemental strand, 12993 - 12893
Alignment:
Q  159 taatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12993 taatactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 12894  T
Q  259 t 259  Q
    |    
T  12893 t 12893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 12858 - 12906
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  12858 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 12906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 6126 - 6228
Alignment:
Q  157 aataatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  6126 aataatactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttga 6225  T
Q  257 cct 259  Q
    |||    
T  6226 cct 6228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 6261 - 6215
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  6261 tactacctccggtcctatttataagagaaatttaggtcaacaaaagt 6215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 49635 - 49538
Alignment:
Q  162 tactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  49635 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacct 49538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 49503 - 49551
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  49503 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 49551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 1453 - 1368
Alignment:
Q  174 tcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 259  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1453 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 1344 - 1381
Alignment:
Q  171 cggtcctatttataagagaattttgggtcaacaaaagt 208  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  1344 cggtcctatttataagagaaatttaggtcaacaaaagt 1381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 231301 - 231397
Alignment:
Q  160 aatactccctacggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 256  Q
    |||||||||| |||||||||||||| |||||| || |||||||||||||||||||| |||||| ||||||||||||| ||||||  |||||||||||    
T  231301 aatactccctccggtcctatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttga 231397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 1 - 81
Alignment:
Q  178 atttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||||||||||  | | |||||||||||||||| ||| | |||||||||| |||||||||||||  |||||||||||||    
T  1 atttataagagaaagtcgagtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgacc 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 312833 - 312752
Alignment:
Q  177 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 258  Q
    |||||| |||||| |||| | ||||||||| ||||| ||||||||| ||||||  |  || ||||||| |||||||||||||    
T  312833 tatttaaaagagactttttgatcaacaaaaattgatgtatctagtttaaaatttggatcagatacattaacttttgttgacc 312752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University