View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9704_low_21 (Length: 293)
Name: NF9704_low_21
Description: NF9704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9704_low_21 |
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Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 18 - 291
Target Start/End: Complemental strand, 32375644 - 32375371
Alignment:
| Q |
18 |
tgaaggactattgataatgattcacaacattgcagataacattgacaaaattgataacagaacacctttaggtccttacacaactcaattgattgagtat |
117 |
Q |
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| T |
32375644 |
tgaaggactattgataatgattcacaacattgcagataacattgacaaaattgataacagaacacctttaggtccttacacaactcaattgattgagtat |
32375545 |
T |
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| Q |
118 |
aaacccttttgggaggaaaaagaaaaagatgatgatttagaagcttgggttgaacatgttcgaatcacgaaagtgcaaaagaagaaattacttatagccg |
217 |
Q |
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| T |
32375544 |
aaacctttttgggaggaaaaagaaaaagatgatgatttagaagcttgggttgaacatgttcgaatcacgaaagtgcaaaagaagaaattacttatagccg |
32375445 |
T |
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| Q |
218 |
cgaatcatttcaatagagataataaaaagggtttagagtacttgaagcatgctaagttaatctctgctcctcct |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
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| T |
32375444 |
cgaatcatttcaatagagataataaaaagggtttagagtacttgaagcatgctaagttaatctccgatcctcct |
32375371 |
T |
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