View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9705_low_17 (Length: 290)
Name: NF9705_low_17
Description: NF9705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9705_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 15 - 285
Target Start/End: Original strand, 3281873 - 3282143
Alignment:
| Q |
15 |
agatgaagatatagtacaaaatacttctatgtggtgcttattaaatcacattttcaatttataccatatacatattccaccaaacttgatctctcactct |
114 |
Q |
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| T |
3281873 |
agatgaagatatagtacaaaatacttctatgtggtgcttattaaatcacattttcaatttataccatatacatattccaccaaacttgatctctcactct |
3281972 |
T |
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| Q |
115 |
catcttaaaacaaagttactcaaataatatggatgcttgttttctctctcacagttctttcaccaagatcagaggtggatctctaccttactccaaaaga |
214 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3281973 |
catctaaaaacaaagttactcaaataatatggatgcttgttttctctcccacagttctttcaccaagatcagaggtggatctctaccttactccaaaaga |
3282072 |
T |
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| Q |
215 |
ttttctcatcaacaattcaattcaagaaaagttggaattccatttcatgtatcatgtaagttcttctctct |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3282073 |
ttttctcatcaacaattcaattcaagaaaagttggaattccatttcatgtatcatgtaagttcttctctct |
3282143 |
T |
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