View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9705_low_4 (Length: 481)
Name: NF9705_low_4
Description: NF9705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9705_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 18 - 471
Target Start/End: Original strand, 34905632 - 34906085
Alignment:
| Q |
18 |
ataaagagcactttaaacaagaacaaaagaacactgagcnnnnnnnttgtgaattagataaaaatatagtctattattatcctgaacttagctgatgcaa |
117 |
Q |
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| T |
34905632 |
ataaagagcactttaaacaagaacaaaagaacactgagcaaaaaaattgtgaattagataaaaatatagtctattattatcctgaacttagctgatgcaa |
34905731 |
T |
|
| Q |
118 |
tgttagttaaggttgctaagtaatgcaaacatcaaaagtaaattttgtgcatctgcaaaacagtcaaatttgaagccataaaacttaccagaagaaatct |
217 |
Q |
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| T |
34905732 |
tgttagttaaggttgctaagtaatgcaaacatcaaaagtaaattttgtgcatctgcaaaacagtcaaatttgaagccataaaacttaccagaagaaatct |
34905831 |
T |
|
| Q |
218 |
gctcttgagttgagatcagtacttaacaccataagaggcttccctgtctgcaaatatcaacatagaaaccagttatgctattcaataaacataagctttc |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34905832 |
gctcttgagttgagatcagtacttaacaccataagaggcttccctgtctgcaaatatcaacatagaaaccagttatgctattcaataaacataagctttc |
34905931 |
T |
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| Q |
318 |
ttatgttttataaccaagatttcaaaaagatagtccacgacggcaatgttaggtttttgatgcctcagcgaccgtaattgtggccgcatcagctgttctt |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34905932 |
ttatgttttataaccaagatttcaaaaagatagtccacgacggcaatgttaggtttttgatgcctcagcgaccgtaattgtggccgcatcagctgttctt |
34906031 |
T |
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| Q |
418 |
gaccataaatttatgcatcttcaaggatcacaatgtgattgcaaatactctctg |
471 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34906032 |
gaccataaatttatgcatcttcaaggatcacaatgtgattgcaaatactctctg |
34906085 |
T |
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