View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9706_high_26 (Length: 298)

Name: NF9706_high_26
Description: NF9706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9706_high_26
NF9706_high_26
[»] chr4 (15 HSPs)
chr4 (18-290)||(11415769-11416044)
chr4 (223-287)||(34657915-34657979)
chr4 (213-271)||(37005893-37005951)
chr4 (210-289)||(8667087-8667165)
chr4 (210-289)||(18234252-18234331)
chr4 (210-289)||(39406806-39406885)
chr4 (210-276)||(25219676-25219742)
chr4 (216-288)||(19298804-19298877)
chr4 (213-273)||(34512086-34512146)
chr4 (210-289)||(33040563-33040642)
chr4 (244-289)||(1924677-1924722)
chr4 (232-277)||(4936047-4936092)
chr4 (239-288)||(16913388-16913437)
chr4 (232-289)||(44673686-44673743)
chr4 (221-289)||(11485197-11485265)
[»] scaffold0009 (1 HSPs)
scaffold0009 (209-292)||(1482-1565)
[»] chr8 (19 HSPs)
chr8 (210-289)||(26657677-26657756)
chr8 (210-290)||(16290865-16290945)
chr8 (214-289)||(24184744-24184819)
chr8 (214-285)||(18036809-18036880)
chr8 (214-274)||(24317424-24317484)
chr8 (210-289)||(10568289-10568368)
chr8 (210-289)||(21593193-21593272)
chr8 (210-289)||(23595387-23595466)
chr8 (210-289)||(23604309-23604388)
chr8 (210-289)||(29840871-29840950)
chr8 (210-289)||(45268824-45268903)
chr8 (215-289)||(44357-44431)
chr8 (239-285)||(19742056-19742102)
chr8 (216-286)||(26867471-26867541)
chr8 (210-289)||(16889984-16890063)
chr8 (215-289)||(41600734-41600808)
chr8 (210-287)||(6001434-6001511)
chr8 (232-289)||(26393353-26393410)
chr8 (215-287)||(17959894-17959966)
[»] chr5 (14 HSPs)
chr5 (214-289)||(2259390-2259465)
chr5 (211-289)||(21711528-21711606)
chr5 (214-289)||(15614747-15614822)
chr5 (221-277)||(24765501-24765557)
chr5 (210-289)||(5781069-5781148)
chr5 (210-289)||(19068683-19068762)
chr5 (244-289)||(28637628-28637673)
chr5 (214-266)||(4120552-4120604)
chr5 (206-262)||(24122975-24123031)
chr5 (210-289)||(21877890-21877969)
chr5 (213-256)||(25538844-25538887)
chr5 (210-289)||(35341899-35341977)
chr5 (244-289)||(21027039-21027084)
chr5 (244-289)||(22602054-22602099)
[»] chr1 (26 HSPs)
chr1 (206-289)||(34528904-34528987)
chr1 (221-287)||(19054385-19054451)
chr1 (210-289)||(10423790-10423869)
chr1 (214-289)||(16816227-16816302)
chr1 (206-262)||(10032073-10032129)
chr1 (206-266)||(26505915-26505975)
chr1 (210-289)||(19088884-19088963)
chr1 (206-289)||(41574284-41574366)
chr1 (212-289)||(27035843-27035920)
chr1 (209-289)||(43021723-43021804)
chr1 (213-289)||(18332693-18332769)
chr1 (240-289)||(3833445-3833494)
chr1 (213-266)||(10433230-10433283)
chr1 (213-286)||(13309371-13309444)
chr1 (210-255)||(14986127-14986172)
chr1 (18-134)||(36373049-36373166)
chr1 (234-290)||(15120877-15120933)
chr1 (234-290)||(15145065-15145121)
chr1 (213-289)||(21487828-21487904)
chr1 (210-290)||(34517688-34517768)
chr1 (238-289)||(12629266-12629317)
chr1 (246-289)||(41917088-41917131)
chr1 (221-287)||(33064820-33064886)
chr1 (244-289)||(21813173-21813218)
chr1 (240-289)||(31893124-31893173)
chr1 (210-266)||(2583068-2583124)
[»] scaffold0068 (1 HSPs)
scaffold0068 (211-289)||(2304-2382)
[»] chr6 (33 HSPs)
chr6 (210-290)||(20898971-20899051)
chr6 (214-287)||(13575013-13575086)
chr6 (214-287)||(13577552-13577625)
chr6 (214-289)||(14641446-14641521)
chr6 (221-284)||(24617733-24617796)
chr6 (210-289)||(12435964-12436043)
chr6 (221-287)||(8483632-8483698)
chr6 (214-267)||(13565945-13565998)
chr6 (213-289)||(9351116-9351192)
chr6 (221-277)||(15141904-15141960)
chr6 (214-276)||(13570488-13570550)
chr6 (213-266)||(11319502-11319555)
chr6 (212-289)||(34338085-34338162)
chr6 (210-289)||(3056947-3057026)
chr6 (213-292)||(9344485-9344564)
chr6 (210-289)||(14372175-14372254)
chr6 (210-289)||(26592511-26592590)
chr6 (221-266)||(15050036-15050081)
chr6 (213-266)||(24205493-24205546)
chr6 (213-285)||(1110470-1110542)
chr6 (213-289)||(20589643-20589719)
chr6 (210-289)||(18306717-18306795)
chr6 (210-289)||(24127813-24127892)
chr6 (234-289)||(31633595-31633650)
chr6 (210-289)||(32569840-32569919)
chr6 (223-288)||(841306-841372)
chr6 (207-289)||(8212241-8212323)
chr6 (232-266)||(22705348-22705382)
chr6 (215-289)||(24373525-24373599)
chr6 (213-287)||(30884412-30884486)
chr6 (244-289)||(26522735-26522780)
chr6 (227-287)||(7242881-7242941)
chr6 (234-286)||(17112236-17112288)
[»] chr7 (17 HSPs)
chr7 (207-289)||(1633314-1633396)
chr7 (215-265)||(28780215-28780265)
chr7 (232-289)||(1537969-1538026)
chr7 (213-289)||(980929-981005)
chr7 (227-283)||(12163411-12163467)
chr7 (210-289)||(14073799-14073877)
chr7 (210-289)||(14383827-14383905)
chr7 (215-265)||(2040072-2040122)
chr7 (244-289)||(37375019-37375064)
chr7 (210-289)||(11295355-11295438)
chr7 (239-289)||(11842765-11842815)
chr7 (244-289)||(1862350-1862395)
chr7 (240-289)||(4463449-4463498)
chr7 (244-289)||(12727811-12727856)
chr7 (240-289)||(28937358-28937407)
chr7 (244-289)||(38993120-38993165)
chr7 (217-289)||(22849520-22849592)
[»] chr3 (18 HSPs)
chr3 (207-265)||(26953937-26953995)
chr3 (18-120)||(32252733-32252835)
chr3 (213-290)||(25760029-25760106)
chr3 (210-286)||(1051306-1051382)
chr3 (224-287)||(10623238-10623301)
chr3 (210-289)||(18517688-18517767)
chr3 (210-289)||(19826401-19826480)
chr3 (211-289)||(26430267-26430345)
chr3 (219-266)||(19256160-19256207)
chr3 (213-287)||(19185088-19185162)
chr3 (232-289)||(51661690-51661747)
chr3 (210-290)||(3736490-3736570)
chr3 (237-277)||(10997449-10997489)
chr3 (210-290)||(16053462-16053542)
chr3 (213-289)||(16309657-16309733)
chr3 (213-289)||(18490651-18490727)
chr3 (244-288)||(20952399-20952443)
chr3 (236-288)||(27943628-27943680)
[»] chr2 (20 HSPs)
chr2 (220-289)||(40926460-40926529)
chr2 (234-289)||(17151305-17151360)
chr2 (210-289)||(36802254-36802333)
chr2 (237-290)||(24270833-24270886)
chr2 (237-290)||(24297350-24297403)
chr2 (221-289)||(20434182-20434250)
chr2 (210-289)||(20477435-20477514)
chr2 (214-288)||(17377499-17377573)
chr2 (210-263)||(12102845-12102898)
chr2 (220-265)||(13619093-13619138)
chr2 (213-266)||(28522885-28522938)
chr2 (210-266)||(29216636-29216692)
chr2 (210-266)||(29329935-29329991)
chr2 (210-289)||(17679703-17679782)
chr2 (210-289)||(22169955-22170034)
chr2 (239-277)||(28948893-28948931)
chr2 (232-265)||(6083769-6083802)
chr2 (240-289)||(32234445-32234494)
chr2 (213-266)||(38376856-38376909)
chr2 (242-274)||(24933718-24933750)
[»] scaffold0437 (2 HSPs)
scaffold0437 (214-289)||(11424-11499)
scaffold0437 (210-289)||(14319-14398)
[»] scaffold0176 (1 HSPs)
scaffold0176 (206-287)||(26464-26544)
[»] scaffold0607 (1 HSPs)
scaffold0607 (210-289)||(296-375)
[»] scaffold0114 (1 HSPs)
scaffold0114 (221-287)||(2976-3042)
[»] scaffold0166 (1 HSPs)
scaffold0166 (221-277)||(7998-8054)
[»] scaffold0911 (1 HSPs)
scaffold0911 (210-289)||(2208-2287)
[»] scaffold0886 (1 HSPs)
scaffold0886 (216-289)||(2792-2865)
[»] scaffold0012 (2 HSPs)
scaffold0012 (232-289)||(103716-103773)
scaffold0012 (234-287)||(52721-52774)
[»] scaffold0292 (1 HSPs)
scaffold0292 (210-266)||(21253-21309)
[»] scaffold0006 (1 HSPs)
scaffold0006 (211-263)||(36662-36714)
[»] scaffold0195 (2 HSPs)
scaffold0195 (234-289)||(9000-9054)
scaffold0195 (234-289)||(14389-14443)
[»] scaffold0356 (1 HSPs)
scaffold0356 (243-289)||(13735-13781)
[»] scaffold0196 (1 HSPs)
scaffold0196 (232-266)||(797-831)
[»] scaffold0045 (1 HSPs)
scaffold0045 (223-289)||(80345-80411)
[»] scaffold0265 (1 HSPs)
scaffold0265 (244-289)||(19591-19636)
[»] scaffold0257 (1 HSPs)
scaffold0257 (213-262)||(16233-16282)
[»] scaffold0029 (1 HSPs)
scaffold0029 (244-289)||(129431-129476)
[»] scaffold0002 (1 HSPs)
scaffold0002 (244-289)||(307248-307293)
[»] scaffold0123 (1 HSPs)
scaffold0123 (237-265)||(29985-30013)
[»] scaffold0111 (1 HSPs)
scaffold0111 (221-289)||(41235-41303)


Alignment Details
Target: chr4 (Bit Score: 178; Significance: 5e-96; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 18 - 290
Target Start/End: Original strand, 11415769 - 11416044
Alignment:
Q  18 ggtacaaagttaaaaactctgaataaagaggttaatgtaattggaatatgtcaaattttcatcctccaaagactttaacaaaatacatgtgaaagattgt 117  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11415769 ggtacaaagttaaaaactctgaataaagaggtcaatgtaattggaatatatcaaattttcatcctccaaagactttaacaaaatacatgtgaaagattgt 11415868  T
Q  118 taagaaaactgatagttatgaagttaatcccaaaaattaggattcatcacaaatactactctttattgctataatct---aggnnnnnnnnctaggcaag 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||   |          |||||||||    
T  11415869 taagaaaactgatagttatgaagttaatcccaaaaattaggattcatcacaaataccgctctttattgctataatctaaaaattttttttgctaggcaag 11415968  T
Q  215 gagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    |||||||||||  ||| || ||||||||||||||||||||||| |||||||| | || |||||||||| |||||||    
T  11415969 gagagaggacaaacatcaaaaggaaacaccgacatcccaactaagttggcaccctggaaaacccccattctatgct 11416044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 34657915 - 34657979
Alignment:
Q  223 acatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| | |||||||    
T  34657915 acatgcatcaagaggaaacaccgacatcccaactaggttggcaccccggggaacctctatcctat 34657979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 37005893 - 37005951
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgg 271  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||    
T  37005893 aggagagaggacatgcatcaagaggaagcaccgacatcccaattaggttggcaccccgg 37005951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 8667087 - 8667165
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| ||||| |||| |||||| |||| |||||||| ||||||||||| || ||| |||||| |||||||||||    
T  8667087 gcaaggagagtggacaggcatcaagaggcaacatcgacatcctaactaggttgg-accccgagaaacctccatcctatgc 8667165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 18234331 - 18234252
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||||| |||  | || |||||| |||||||||||||||| ||| || ||| |||||||||||    
T  18234331 gcaaggagagaggacaggcatgaggagtcatcatcgacattccaactaggttggcaccccgagatacctccatcctatgc 18234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 39406806 - 39406885
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||| ||||| | |||| |||||| |||| |||| | |||||||||||||||| ||| |||||| |||||||||||    
T  39406806 gcaaggagtgaggataggcatcaagaggcaacatcgacttaccaactaggttggcaccccgagaaacctccatcctatgc 39406885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 25219742 - 25219676
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaac 276  Q
    ||||||||  ||||||| ||| | |||||||||||||||| ||||||||||||||||  ||||||||    
T  25219742 gcaaggagtaaggacatacatcaggaggaaacaccgacattccaactaggttggcacctcgggaaac 25219676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 19298804 - 19298877
Alignment:
Q  216 agagaggacatgcatgaagaggaaacaccgacatcccaactaggttggca-caccgggaaacccccatcctatg 288  Q
    |||||| |||| ||| |||||||||||| |||||| |||||||||||||| | ||||| |||| ||||||||||    
T  19298804 agagagaacatacatcaagaggaaacactgacatctcaactaggttggcacccccggggaacctccatcctatg 19298877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 34512146 - 34512086
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccggga 273  Q
    ||||||| ||||| |||| |||||| | || ||||||||||||||||||||||| ||||||    
T  34512146 aggagagtggacaggcatcaagaggcatcatcgacatcccaactaggttggcaccccggga 34512086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 33040563 - 33040642
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||| ||||| | ||||| || |||||  |||| ||||||||||||||||||||||| ||| |||||| ||||| |||||    
T  33040563 gcaaagagagtgaacatgtatcaagagacaacatcgacatcccaactaggttggcaccccgagaaacctccatcatatgc 33040642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 1924677 - 1924722
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  1924677 cgacatcccaactaggttggcaccccgagacacctccatcctatgc 1924722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 4936092 - 4936047
Alignment:
Q  232 aagaggaaacaccgacatcccaactaggttggcacaccgggaaacc 277  Q
    ||||||||||| |||||||||||||| |||||||| ||| ||||||    
T  4936092 aagaggaaacatcgacatcccaactaagttggcaccccgcgaaacc 4936047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 16913388 - 16913437
Alignment:
Q  239 aacaccgacatcccaactaggttggcacaccgggaaacccccatcctatg 288  Q
    |||||||||||||||||| ||||||||| ||||||| || || |||||||    
T  16913388 aacaccgacatcccaactgggttggcactccgggaagcctccgtcctatg 16913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 44673686 - 44673743
Alignment:
Q  232 aagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||| |||| ||||||||||||||||||||||| |||  ||| | |||||||||||    
T  44673686 aagaggcaacatcgacatcccaactaggttggcaccccgcaaaatctccatcctatgc 44673743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 11485197 - 11485265
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| |||||| | |  ||||||||||||||||||||||| ||| ||  || |||||||||||    
T  11485197 ggacatgcatcaagaggtatcttcgacatcccaactaggttggcaccccgagaggcctccatcctatgc 11485265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 1482 - 1565
Alignment:
Q  209 ggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgcttc 292  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  1482 ggcaaggagagaggacaagcatcaagaggcaacaccgacatcccaactaggttggcaccccgggaaacctccatcctatgcttc 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 26657756 - 26657677
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  ||||||||| |||||||||||    
T  26657756 gcaaggagagaggacatgcatcaagaggaaacaccgacatcccaactaagttggcacttcgggaaacctccatcctatgc 26657677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 16290945 - 16290865
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    ||||||||| ||||||  ||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  16290945 gcaaggagaaaggacaaacatcaagaggcaacaccgacatcccaactaggttggcaccccgggaaacctccatcctatgct 16290865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 24184744 - 24184819
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||  ||| |||||| |||||||||||||||||||||||||||  ||||||| || |||||||||||    
T  24184744 ggagagaggacaaacatcaagagggaacaccgacatcccaactaggttggcatcccgggaaccctccatcctatgc 24184819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 18036809 - 18036880
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcct 285  Q
    ||||||||||||  ||| |||||||||||||||||||||||||| |||||||| ||| | |||| |||||||    
T  18036809 ggagagaggacaaacatcaagaggaaacaccgacatcccaactatgttggcaccccgaggaacctccatcct 18036880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 24317484 - 24317424
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaa 274  Q
    |||||||| |||| ||| ||||||||||||| |||| |||||||||||||||| |||||||    
T  24317484 ggagagagaacatacatcaagaggaaacaccaacataccaactaggttggcaccccgggaa 24317424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 10568289 - 10568368
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||  ||| |||||| |||| |||| | |||||||||||||||| ||| |||||  |||||||||||    
T  10568289 gcaaggagagaggacagacatcaagaggcaacatcgacttaccaactaggttggcaccccgagaaacttccatcctatgc 10568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 21593272 - 21593193
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| |||||| | || |||||| |||||||||||||||| ||| || |||  ||||||||||    
T  21593272 gcaaggagagaggacaggcatcaagaggcatcatcgacattccaactaggttggcaccccgagagaccttcatcctatgc 21593193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 23595466 - 23595387
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| |||||| | || |||||||||||||||||||| || | | || ||| |||||||||||    
T  23595466 gcaaggagagaggacacgcatcaagaggcatcatcgacatcccaactaggttggtaccctgagagacctccatcctatgc 23595387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 23604388 - 23604309
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| |||||| | || |||||||||||||||||||| || | | || ||| |||||||||||    
T  23604388 gcaaggagagaggacacgcatcaagaggcatcatcgacatcccaactaggttggtaccctgagagacctccatcctatgc 23604309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 29840950 - 29840871
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||| ||||| |||||||||| ||||   |||| ||||||||||||||||||||||| ||| |||||| ||||| |||||    
T  29840950 gcaaagagagtggacatgcatcaagaaacaacatcgacatcccaactaggttggcaccccgagaaacctccatcatatgc 29840871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 45268824 - 45268903
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| |||||| |||| |||| | ||||| |||||||||| ||| |||||| || ||||||||    
T  45268824 gcaaggagagaggacaggcatcaagaggcaacatcgacttaccaaccaggttggcaccccgagaaacctccttcctatgc 45268903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 44431 - 44357
Alignment:
Q  215 gagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||| |||| ||||| || |||||||||||| ||||||| |||||||| || |||||||||| |||| ||||||    
T  44431 gagagtggacttgcatcaaaaggaaacaccgaaatcccaattaggttggtaccccgggaaacctccatactatgc 44357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 19742102 - 19742056
Alignment:
Q  239 aacaccgacatcccaactaggttggcacaccgggaaacccccatcct 285  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||    
T  19742102 aacaccgacatcccaactaggttggcaccccgggaagcctccatcct 19742056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 26867541 - 26867471
Alignment:
Q  216 agagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatccta 286  Q
    |||||||||| || | |||||| | || |||||||||||||||||||||||  ||||||||| ||||||||    
T  26867541 agagaggacaggcttcaagaggcatcatcgacatcccaactaggttggcacctcgggaaacctccatccta 26867471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 16890063 - 16889984
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| | |||  | || ||||||||||||||||||||||| ||| || ||| ||||| |||||    
T  16890063 gcaaggagagaggacaggcatcaggagtcatcatcgacatcccaactaggttggcaccccgagatacctccatcttatgc 16889984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 41600808 - 41600734
Alignment:
Q  215 gagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||| |||||||||| |||||| |||| ||| ||||||||||| ||||||| ||| |||||   ||||||||||    
T  41600808 gagagtggacatgcatcaagaggcaacatcgatatcccaactagattggcaccccgagaaactttcatcctatgc 41600734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 287
Target Start/End: Complemental strand, 6001511 - 6001434
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    ||||||||||||||||  ||| |||||| |||| |||||| |||||||||||| |||  || ||||||  ||||||||    
T  6001511 gcaaggagagaggacaaacattaagaggcaacatcgacattccaactaggttgacaccgcgagaaaccttcatcctat 6001434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 26393353 - 26393410
Alignment:
Q  232 aagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||| ||||| |||||||||||||| |||| ||| ||| |||||| |||||||||||    
T  26393353 aagagaaaacaacgacatcccaactaagttgccaccccgcgaaacctccatcctatgc 26393410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 17959894 - 17959966
Alignment:
Q  215 gagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    ||||||||||| |||| |||||| |||| |||||||| |||||||| |||||  || ||||||  ||||||||    
T  17959894 gagagaggacaggcattaagaggcaacatcgacatcctaactaggtaggcaccacgagaaaccttcatcctat 17959966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 2259390 - 2259465
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  2259390 ggagagtggacatgcatcaagaggaaacaccgacatcccaactaggttggcatcccgggaaacctccatcctatgc 2259465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 289
Target Start/End: Original strand, 21711528 - 21711606
Alignment:
Q  211 caaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  21711528 caaggagagaggacaagcatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgc 21711606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 15614822 - 15614747
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  15614822 ggagagaggacaagcatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgc 15614747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 24765501 - 24765557
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacc 277  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  24765501 ggacatgcatcaagaggaaataccgacatcccaactagattggcatcccgggaaacc 24765557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 5781069 - 5781148
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||| |||||||  ||| |||||| |||| ||||||||||||||||||||||  ||| |||||  |||||||||||    
T  5781069 gcaaggagggaggacagacattaagaggcaacatcgacatcccaactaggttggcatcccgagaaacttccatcctatgc 5781148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 19068683 - 19068762
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||| |||||||||||  ||| |||||| |||| |||||||| |||||||||||||| | | |||||| |||||||||||    
T  19068683 gcaatgagagaggacagacattaagaggcaacatcgacatccaaactaggttggcaccctgagaaacctccatcctatgc 19068762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 28637673 - 28637628
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||||    
T  28637673 cgacatcccaactaggttggcaccccgaggaacccccatcctatgc 28637628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 4120604 - 4120552
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    |||||||||| |  ||| |||||| ||||||||||||||||||||||||||||    
T  4120604 ggagagaggataaacatcaagagggaacaccgacatcccaactaggttggcac 4120552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 24123031 - 24122975
Alignment:
Q  206 ctaggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttg 262  Q
    |||||||||||||  |||||  ||| ||||||||||||||||||| |||||||||||    
T  24123031 ctaggcaaggagaagggacagacatcaagaggaaacaccgacatctcaactaggttg 24122975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 21877890 - 21877969
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| |||||  ||| ||| || | || ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  21877890 gcaaggagagtggacaaacatcaagcggcatcatcgacatcccaactaggttggcaccccgagacacctccatcctatgc 21877969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 25538887 - 25538844
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaact 256  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||    
T  25538887 aggagataggacatgcatcaagaggaaacaccgacattccaact 25538844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 35341977 - 35341899
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| |||||  | || |||||||||||||| |||||||| ||| || ||| |||||||||||    
T  35341977 gcaaggagagaggacaggcatcaagagtcatcatcgacatcccaacta-gttggcaccccgagatacctccatcctatgc 35341899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 21027039 - 21027084
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| |||   ||||||||||||||||    
T  21027039 cgacatcccaactaggttggcaccccgcagaacccccatcctatgc 21027084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 22602054 - 22602099
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| |||   ||||||||||||||||    
T  22602054 cgacatcccaactaggttggcaccccgcagaacccccatcctatgc 22602099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 34528904 - 34528987
Alignment:
Q  206 ctaggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| ||  |||| ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  34528904 ctaggcaaggagagagaacgggcatcaagaggaaacagcgacatcccaactaggttggcaccccgggaaacctccatcctatgc 34528987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 19054385 - 19054451
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  19054385 ggacatgcatcaagaggaaacaccgacatcccaactaggttggcaccccggggaacctccatcctat 19054451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 10423790 - 10423869
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| ||||| |||| |||||| |||| ||||||||||||||||||||||| ||| |||||| ||||| |||||    
T  10423790 gcaaggagagtggacaagcatcaagaggcaacatcgacatcccaactaggttggcaccccgagaaacctccatcttatgc 10423869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 16816227 - 16816302
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||| |||||||||| ||||||||||||| ||||||||||||||||||| |  |||| |||| |||||||||||    
T  16816227 ggagagtggacatgcatcaagaggaaacaccaacatcccaactaggttggcgcctcggggaacctccatcctatgc 16816302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 10032073 - 10032129
Alignment:
Q  206 ctaggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttg 262  Q
    |||||||||||||  ||||| |||| |||||||||||||||||||||||||||||||    
T  10032073 ctaggcaaggagaagggacaggcatcaagaggaaacaccgacatcccaactaggttg 10032129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 26505975 - 26505915
Alignment:
Q  206 ctaggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    ||||||||||||||||||||||||| |||||||||||| ||||  ||| ||||||||||||    
T  26505975 ctaggcaaggagagaggacatgcatcaagaggaaacactgacaaaccagctaggttggcac 26505915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 19088963 - 19088884
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||| |||||||||||| |||||| ||| |||||||| ||   |||||||| ||||| |||||    
T  19088963 gcaaggagagaggacatgcatcaagaggaaacactgacatctcaattaggttggaaccttgggaaacctccatcttatgc 19088884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 41574284 - 41574366
Alignment:
Q  206 ctaggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||| ||||||  ||| || |||||||||| ||||||||||||||||| ||| || ||||||| |||||||||||    
T  41574284 ctaggcaaggagaaaggacagacatcaaaaggaaacaccaacatcccaactaggttgacac-cctggaaacctccatcctatgc 41574366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 27035843 - 27035920
Alignment:
Q  212 aaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||| |||| |||||| | || ||||||||||||||||||||||  ||| || ||| |||||||||||    
T  27035843 aaggagagaggacaagcatcaagaggcatcatcgacatcccaactaggttggcatcccgagagacctccatcctatgc 27035920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 43021723 - 43021804
Alignment:
Q  209 ggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacacc-gggaaacccccatcctatgc 289  Q
    ||||| |||||||||||||||| ||||| |||||||||||  |||  ||||||||||| || |||||||| |||||||||||    
T  43021723 ggcaatgagagaggacatgcatcaagagaaaacaccgacaaaccacttaggttggcaccccggggaaacctccatcctatgc 43021804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 18332693 - 18332769
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||| | |||| |||| ||||| ||||| ||||||||||||||||||||||| ||||  |||| |||||||||||    
T  18332693 aggagaaaagacaagcattaagagaaaacatcgacatcccaactaggttggcaccccggagaacctccatcctatgc 18332769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 3833445 - 3833494
Alignment:
Q  240 acaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||||||| ||||||| || || ||||||||    
T  3833445 acaccgacatcccaactaggttggcaccccgggaagcctccgtcctatgc 3833494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 10433283 - 10433230
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    |||||| |||||| |||| |||||||| ||||||||||||||||||||| ||||    
T  10433283 aggagaaaggacaagcatcaagaggaagcaccgacatcccaactaggtttgcac 10433230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 13309371 - 13309444
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatccta 286  Q
    ||||||| ||||| |||| |||||| | || ||||||||||||||||||||||| ||| || ||| ||||||||    
T  13309371 aggagagtggacaggcatcaagaggcatcatcgacatcccaactaggttggcaccccgagagacctccatccta 13309444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 14986172 - 14986127
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaac 255  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||    
T  14986172 gcaatgagagaggacatgcatcaagaggaaacaccgacatcacaac 14986127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 36373049 - 36373166
Alignment:
Q  18 ggtacaaagttaaaaactctgaataaagaggttaatgtaattggaatatgtcaaattttcatcctccaaagactttaacaaaatacatgtgaaagattgt 117  Q
    |||||| || ||| ||||||||| |||||||||| ||| ||||| ||    ||||||  |||||||||||||||| ||| |||||| |||||| ||| ||    
T  36373049 ggtacagagataagaactctgaagaaagaggttagtgtgattggtattaagcaaattagcatcctccaaagacttcaacgaaatacttgtgaaggatcgt 36373148  T
Q  118 taaga-aaactgatagtt 134  Q
    ||||| ||| ||||||||    
T  36373149 taagagaaaatgatagtt 36373166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 15120877 - 15120933
Alignment:
Q  234 gaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    |||||||||| ||||| |||| |||||| |||| |||||||||| ||||||||||||    
T  15120877 gaggaaacactgacatgccaattaggttagcaccccgggaaacctccatcctatgct 15120933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 15145065 - 15145121
Alignment:
Q  234 gaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    |||||||||| ||||| |||| |||||| |||| |||||||||| ||||||||||||    
T  15145065 gaggaaacactgacatgccaattaggttagcaccccgggaaacctccatcctatgct 15145121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 21487828 - 21487904
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||| ||||| |||| ||||||||    ||||||||||||||||||||||| |||   ||||||||||||||||    
T  21487828 aggagagtggacaggcatcaagaggaagtgacgacatcccaactaggttggcaccccgaagaacccccatcctatgc 21487904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 34517768 - 34517688
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    ||||||||| | |||| |||| |||| |||||| |||||||||||  |||||||||  ||| |||||| ||||||||||||    
T  34517768 gcaaggagaaatgacaagcatcaagaagaaacatcgacatcccaataaggttggcatcccgagaaacctccatcctatgct 34517688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 12629266 - 12629317
Alignment:
Q  238 aaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||| ||||||  |||||||||| || ||||||||    
T  12629266 aaacaccgacatcccaactagattggcatcccgggaaacctccgtcctatgc 12629317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 41917131 - 41917088
Alignment:
Q  246 acatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||    
T  41917131 acatcccaactaggttggcaccccggagaacccccatcctatgc 41917088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 33064820 - 33064886
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    ||||| |||| ||| |||| || ||||||||||||||||||||||| |||   ||||||||||||||    
T  33064820 ggacaggcatcaaggggaagcaacgacatcccaactaggttggcaccccgcagaacccccatcctat 33064886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 21813218 - 21813173
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  21813218 cgacatcccaactaggttggcaccccgagacacctccatcctatgc 21813173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 31893173 - 31893124
Alignment:
Q  240 acaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||||||  ||| ||| || |||||||||||    
T  31893173 acaccgacatcccaactaggttggcatcccgagaagcctccatcctatgc 31893124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 2583068 - 2583124
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    ||||||||||||||||  ||| |||||| | || |||||||||||||| ||||||||    
T  2583068 gcaaggagagaggacagacatcaagaggcatcatcgacatcccaactaagttggcac 2583124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 2382 - 2304
Alignment:
Q  211 caaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  2382 caaggagagaggacaagcatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgc 2304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 20899051 - 20898971
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||||||||| || ||||||| ||| ||||||||    
T  20899051 gcaaggagagaggacaagcatcaagaggcaacaccgacatcccaactaggttggcaccccaggaaacctccaccctatgct 20898971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 13575086 - 13575013
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  13575086 ggagagaagacatgcatcaagagggaacaccgacatcccaactaggttggcactccgggaaaccttcatcctat 13575013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 13577625 - 13577552
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  13577625 ggagagaagacatgcatcaagagggaacaccgacatcccaactaggttggcactccgggaaaccttcatcctat 13577552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 14641521 - 14641446
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||  ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  14641521 ggagagaggacaaacatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgc 14641446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 24617733 - 24617796
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcc 284  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  24617733 ggacatgcatcaagaggaaacaccgacatcccaactaggttggcaccccggaaaacctccatcc 24617796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 12436043 - 12435964
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||| | |||| | || ||||||||||||||||||||||| |||  ||||| |||||||||||    
T  12436043 gcaaggagagaggacatgcatcaggaggcatcatcgacatcccaactaggttggcaccccgacaaacctccatcctatgc 12435964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 8483632 - 8483698
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||| |||| | |||||||    
T  8483632 ggacatgcatcaagaggaaacacggacatcccaactaggttggcaccccggggaacctctatcctat 8483698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 13565998 - 13565945
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcaca 267  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||||||||||    
T  13565998 ggagagaggacatgcatcaagagggaacaacgacatcccaactaggttggcaca 13565945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 9351116 - 9351192
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||| |||||||||| || ||  |||| ||||||||||||||||||||||| ||| |||||| |||||||||||    
T  9351116 aggagagtggacatgcatcaatagacaacatcgacatcccaactaggttggcaccccgagaaacctccatcctatgc 9351192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 15141904 - 15141960
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacc 277  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  15141904 ggacgtgcatcaagaggaaacaccgacatcccaactaggttggcaacccgggaaacc 15141960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 13570550 - 13570488
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaac 276  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||| ||||||| ||| |||||    
T  13570550 ggagagaggacatgcatcaagagggaacacctacatcccaactagattggcaccccgagaaac 13570488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 11319555 - 11319502
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    |||||||||||||||||| |||||||| |||| ||||| |||||||||||||||    
T  11319555 aggagagaggacatgcatcaagaggaagcaccaacatctcaactaggttggcac 11319502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 34338085 - 34338162
Alignment:
Q  212 aaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||| ||||  ||| |||||||| || ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  34338085 aaggagagatgacagccatcaagaggaatcatcgacatcccaactaggttggcaccccgagagacctccatcctatgc 34338162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 3057026 - 3056947
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| ||||| |||| |||||  |||| |||||||||||||| ||||| || ||| |||||| |||||||||||    
T  3057026 gcaaggagagtggacaggcatcaagagacaacatcgacatcccaactaagttggtaccccgagaaacctccatcctatgc 3056947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 9344564 - 9344485
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgcttc 292  Q
    |||||| | ||||| ||| ||||| ||||| ||||||||||||||||||||||| |||  ||||| ||| ||||||||||    
T  9344564 aggagaaatgacatacatcaagagaaaacaacgacatcccaactaggttggcactccgcaaaacctccaccctatgcttc 9344485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 14372175 - 14372254
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||  |||||  ||| |||||| |||| ||||||||||||||||||||||| ||| |||| | |||||||||||    
T  14372175 gcaaggagaatggacagacatcaagaggcaacatcgacatcccaactaggttggcactccgagaaatctccatcctatgc 14372254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 26592511 - 26592590
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||| |||||||| |||||  ||||| ||||| ||||||||||||| ||   |||||||| |||||||||||    
T  26592511 gcaaggagagagaacatgcatcaagagagaacactgacattccaactaggttggtaccttgggaaacctccatcctatgc 26592590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 15050036 - 15050081
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||    
T  15050036 ggacatgcatcaagaggaaacaacgatatcccaactaggttggcac 15050081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 24205546 - 24205493
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    ||||||||||||||||||  |||||||| | |||||||||||||| ||||||||    
T  24205546 aggagagaggacatgcatcgagaggaaagaacgacatcccaactaagttggcac 24205493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 1110542 - 1110470
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcct 285  Q
    |||||| ||||||| ||| ||||||||||| ||||||||||  || |||||||| ||| |||||| |||||||    
T  1110542 aggagaaaggacatacatcaagaggaaacaacgacatcccatttaagttggcactccgcgaaacctccatcct 1110470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 20589719 - 20589643
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||| |||||| |||| |||||| | | |||||||| ||||||||||||||| ||||  |||| |||||||||||    
T  20589719 aggagaaaggacaggcatcaagagggacctccgacatctcaactaggttggcaccccggagaacctccatcctatgc 20589643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 18306717 - 18306795
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| | |||  | || ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  18306717 gcaaggagagaggacaggcatcaggagtcatcatcgacatcccaactaggttggcac-ccgagatacctccatcctatgc 18306795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 24127813 - 24127892
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||| ||||||||||  ||| |||||| | || |||||||||| ||||||||||||  || |||||| |||||||||||    
T  24127813 gcaagaagagaggacagacatcaagaggtatcatcgacatcccagctaggttggcacctcgagaaacctccatcctatgc 24127892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 31633595 - 31633650
Alignment:
Q  234 gaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||||| ||||||  | |||||||| || ||||||||    
T  31633595 gaggaaacaccgacatcccaactagattggcatcctgggaaacctccgtcctatgc 31633650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 32569919 - 32569840
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||  ||| |||||| |||| ||||||||||||||| ||| |||  || |||||| | |||||||||    
T  32569919 gcaaggagagaggacagtcattaagaggcaacatcgacatcccaactagattgacacctcgagaaacctctatcctatgc 32569840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 841306 - 841372
Alignment:
Q  223 acatgcatgaagaggaaacaccgacatcccaactaggttggcacaccg-ggaaacccccatcctatg 288  Q
    |||||||| | ||| |||||||||||||||||||| |||||||| ||| || |||| ||||||||||    
T  841306 acatgcatcatgagaaaacaccgacatcccaactaagttggcaccccgagggaacctccatcctatg 841372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 289
Target Start/End: Original strand, 8212241 - 8212323
Alignment:
Q  207 taggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||| |||  ||| || | |||||| ||||||  ||| ||||||||||| ||| |||||| |||||||||||    
T  8212241 taggcaaggagagagaacagacatcaacatgaaacagcgacatttcaattaggttggcaccccgcgaaacctccatcctatgc 8212323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 22705382 - 22705348
Alignment:
Q  232 aagaggaaacaccgacatcccaactaggttggcac 266  Q
    |||||| ||||||||||||||||||||||||||||    
T  22705382 aagaggtaacaccgacatcccaactaggttggcac 22705348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 24373599 - 24373525
Alignment:
Q  215 gagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||| ||||||||||| | |||||| ||| ||||||||||||||||||| || | ||  |||| |||||||||||    
T  24373599 gagaaaggacatgcatcacgaggaagcactgacatcccaactaggttggtaccctggagaacctccatcctatgc 24373525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 30884486 - 30884412
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    |||||||||||||||||| |||  ||| || ||||||||||||||||||| ||| |||  ||||  |||||||||    
T  30884486 aggagagaggacatgcatcaaggagaatcaacgacatcccaactaggttgacaccccgataaacttccatcctat 30884412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 26522780 - 26522735
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  26522780 cgacatcccaactaggttggcaccccgagagacctccatcctatgc 26522735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 7242881 - 7242941
Alignment:
Q  227 gcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    |||| |||||||| |  ||||||||||||||||||||||| ||| | ||||||||| ||||    
T  7242881 gcatcaagaggaagcgacgacatcccaactaggttggcaccccgaggaacccccattctat 7242941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 17112236 - 17112288
Alignment:
Q  234 gaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatccta 286  Q
    ||||||||||||||||  ||||||| ||||||  |||||||||| ||||||||    
T  17112236 gaggaaacaccgacatatcaactagattggcattccgggaaacctccatccta 17112288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 289
Target Start/End: Complemental strand, 1633396 - 1633314
Alignment:
Q  207 taggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||| ||| |||||| | |||||||||    
T  1633396 taggcaaggagagaggacatgcatcaagaggaaacaccgacaatccaactaggttgacaccccgagaaacctcaatcctatgc 1633314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 28780265 - 28780215
Alignment:
Q  215 gagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggca 265  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  28780265 gagagaggacatgcatcaagaggcaacatcgacatcccaactaggttggca 28780215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 1537969 - 1538026
Alignment:
Q  232 aagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||||||||||| |||   |||||||| |||||||||||    
T  1537969 aagaggaaacaccgacatcccaactaggttgccacctagggaaacctccatcctatgc 1538026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 981005 - 980929
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||  ||| |||||| | | |||||||||||||||||||||||| ||||  |||| |||||||||||    
T  981005 aggagagaggacaaacatcaagaggcagctccgacatcccaactaggttggcactccggagaacctccatcctatgc 980929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 12163467 - 12163411
Alignment:
Q  227 gcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatc 283  Q
    |||| |||||| ||||||||||||||||||||||||||||  ||||||||| |||||    
T  12163467 gcatcaagaggcaacaccgacatcccaactaggttggcacctcgggaaacctccatc 12163411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 14073877 - 14073799
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| |||||| |||| |||| | |||||||||||||||| | | |||||| |||||||||||    
T  14073877 gcaaggagagaggaca-gcatcaagaggcaacatcgacttaccaactaggttggcaccctgagaaacctccatcctatgc 14073799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 14383905 - 14383827
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| |||||| |||| |||| | |||||||||||||||| | | |||||| |||||||||||    
T  14383905 gcaaggagagaggaca-gcatcaagaggcaacatcgacttaccaactaggttggcaccctgagaaacctccatcctatgc 14383827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 2040072 - 2040122
Alignment:
Q  215 gagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggca 265  Q
    |||| ||||||| |||||||||| | |||||||||||||||||||||||||    
T  2040072 gagaaaggacatacatgaagaggtagcaccgacatcccaactaggttggca 2040122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 37375064 - 37375019
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||||    
T  37375064 cgacatcccaactaggttggcaccccgaggaacccccatcctatgc 37375019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 11295355 - 11295438
Alignment:
Q  210 gcaaggagagaggacatgcatgaa----gaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||| ||||| ||    |||| |||| |||||||| |||||||||||||| ||| |||||| | |||||||||    
T  11295355 gcaaggagagaggacgtgcattaattaagaggcaacatcgacatccaaactaggttggcactccgagaaacctctatcctatgc 11295438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 289
Target Start/End: Complemental strand, 11842815 - 11842765
Alignment:
Q  239 aacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||||| || ||||||| || ||| |||||||    
T  11842815 aacaccgacatcccaactaggttggtaccccgggaagcctccaccctatgc 11842765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 1862350 - 1862395
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| ||||  |||| |||||||||||    
T  1862350 cgacatcccaactaggttggcaccccggagaacctccatcctatgc 1862395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 4463449 - 4463498
Alignment:
Q  240 acaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||| |||||||||||||||||||||| || |||| || |||||||||||    
T  4463449 acactgacatcccaactaggttggcaccccaggaagcctccatcctatgc 4463498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 12727856 - 12727811
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||  ||| || |||||||||||||||    
T  12727856 cgacatcccaactaggttggcatcccgagagacccccatcctatgc 12727811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 28937407 - 28937358
Alignment:
Q  240 acaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||||||  |||| || || |||||||||||    
T  28937407 acaccgacatcccaactaggttggcatcccggaaagcctccatcctatgc 28937358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 38993120 - 38993165
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| |||   ||||||||||||||||    
T  38993120 cgacatcccaactaggttggcaccccgcagaacccccatcctatgc 38993165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 22849520 - 22849592
Alignment:
Q  217 gagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||| | |||  | || ||||||||||||||||||||||| ||| || ||| | |||||||||    
T  22849520 gagaggacatgcataaggagtcatcatcgacatcccaactaggttggcaccccgagatacctctatcctatgc 22849592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 26953937 - 26953995
Alignment:
Q  207 taggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggca 265  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  26953937 taggcaaggagagacgacatgcatcaagaggaaacaccgacatcccaactaggttggca 26953995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 32252835 - 32252733
Alignment:
Q  18 ggtacaaagttaaaaactctgaataaagaggttaatgtaattggaatatgtcaaattttcatcctccaaagactttaacaaaatacatgtgaaagattgt 117  Q
    |||||| || |||||||||| |||||||||||||||| |||||||||   ||||||||||||||||||||| ||| |||| ||||| |||||| | ||||    
T  32252835 ggtacagaggtaaaaactcttaataaagaggttaatgcaattggaatggatcaaattttcatcctccaaaggcttcaacataatacttgtgaaggcttgt 32252736  T
Q  118 taa 120  Q
    |||    
T  32252735 taa 32252733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 25760106 - 25760029
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||  ||| ||||| ||||||||||||    
T  25760106 aggagagaggacaagcatcaagaggcaacaccgacatcccaactaggttggcacttcggaaaacctccatcctatgct 25760029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 1051306 - 1051382
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatccta 286  Q
    ||||||||||||||||  ||| |||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  1051306 gcaaggagagaggacaaacatcaagagggaacaccgacatcccaactaggttggcacctcgggaaacctccatccta 1051382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 10623238 - 10623301
Alignment:
Q  224 catgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    ||||||| |||||||||||||||||||| |||||||||||||| ||||| |||| |||||||||    
T  10623238 catgcatcaagaggaaacaccgacatcctaactaggttggcaccccggggaacctccatcctat 10623301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 18517767 - 18517688
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| |||||||||| |||||| |||| ||||||||||||||||||||||  ||| || | | |||||||||||    
T  18517767 gcaaggagagtggacatgcatcaagaggcaacatcgacatcccaactaggttggcatcccgagatagctccatcctatgc 18517688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 19826401 - 19826480
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||| || |||| |||| |||||| |||| ||||||||||||||||||||||| ||  |||||| || ||||||||    
T  19826401 gcaaggagggaagacaagcattaagaggcaacatcgacatcccaactaggttggcaccccaagaaacctccgtcctatgc 19826480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 26430345 - 26430267
Alignment:
Q  211 caaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| ||| |||||| | || |||||||| |||||||||||||| |||  | ||| |||||||||||    
T  26430345 caaggagagaggacatacatcaagaggcatcatcgacatcctaactaggttggcaccccgtaatacctccatcctatgc 26430267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 19256207 - 19256160
Alignment:
Q  219 gaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    ||||||||| || ||||||||||| |||||||| ||||||||||||||    
T  19256207 gaggacatgtatcaagaggaaacaacgacatcctaactaggttggcac 19256160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 19185162 - 19185088
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    ||||||||||||| |||| |||  ||| || ||||||||||||||||||||||| |||   ||| ||||||||||    
T  19185162 aggagagaggacaggcatcaaggagaagcaacgacatcccaactaggttggcaccccgaagaactcccatcctat 19185088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 51661747 - 51661690
Alignment:
Q  232 aagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||| |||| ||||||||||||||||||||||| ||| |||  | |||||||||||    
T  51661747 aagaggcaacatcgacatcccaactaggttggcaccccgagaactctccatcctatgc 51661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 3736570 - 3736490
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    |||||||||| |||||  ||| ||| || | || ||||||||||||||||||||||| ||| || ||| ||||||| ||||    
T  3736570 gcaaggagagtggacaaacatcaagcggcatcatcgacatcccaactaggttggcaccccgagacacctccatcctctgct 3736490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 10997489 - 10997449
Alignment:
Q  237 gaaacaccgacatcccaactaggttggcacaccgggaaacc 277  Q
    |||||||||||||||||| ||||||||||| ||| ||||||    
T  10997489 gaaacaccgacatcccaattaggttggcaccccgagaaacc 10997449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 16053542 - 16053462
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    ||||||||||| ||||  ||| |||||| | || ||||||| ||||||||||| ||  ||| |||||| ||||||||||||    
T  16053542 gcaaggagagatgacagacatcaagaggcatcatcgacatctcaactaggttgacatcccgagaaacctccatcctatgct 16053462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 16309657 - 16309733
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||  ||| |||||| | |  |||||||||||||| |||||||| ||||  |||| |||||||||||    
T  16309657 aggagagaggacagacatcaagaggtagcttcgacatcccaactaagttggcaccccggagaacctccatcctatgc 16309733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 18490651 - 18490727
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||  ||| |||||| | |  |||||||||||||| |||||||| ||||  |||| |||||||||||    
T  18490651 aggagagaggacagacatcaagaggtagcttcgacatcccaactaagttggcaccccggagaacctccatcctatgc 18490727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 20952443 - 20952399
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatg 288  Q
    ||||||||||||||||||||||| |||   |||||||||||||||    
T  20952443 cgacatcccaactaggttggcaccccgcagaacccccatcctatg 20952399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 27943628 - 27943680
Alignment:
Q  236 ggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatg 288  Q
    |||||||||||||||||||||||||| |||| ||  | |||| ||||||||||    
T  27943628 ggaaacaccgacatcccaactaggttagcaccccatggaacctccatcctatg 27943680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 40926460 - 40926529
Alignment:
Q  220 aggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  40926460 aggacatgcatcaggaggaaacatcgacatcccaactaggttggcaccccgggaaacctccatcctatgc 40926529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 289
Target Start/End: Complemental strand, 17151360 - 17151305
Alignment:
Q  234 gaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||    
T  17151360 gaggaaacactgacatgccaactaggttggcactccgggaaacctccatcctatgc 17151305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 36802254 - 36802333
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||  | || |||||| |||| ||||||| ||||||||||||||| ||| |||||| |||||||||||    
T  36802254 gcaaggagagaggacgggtattaagaggcaacatcgacatctcaactaggttggcaccccgagaaacctccatcctatgc 36802333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 24270833 - 24270886
Alignment:
Q  237 gaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    ||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  24270833 gaaacactgacatcccaactaggttggcactgcgggaaacctccatcctatgct 24270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 24297403 - 24297350
Alignment:
Q  237 gaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgct 290  Q
    ||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  24297403 gaaacactgacatcccaactaggttggcactgcgggaaacctccatcctatgct 24297350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 20434182 - 20434250
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| ||| | ||||| ||||||| ||||||||||||||| |||  |||||||||||||||||    
T  20434182 ggacatgcattaagggtaaacaacgacatcacaactaggttggcaccccgcaaaacccccatcctatgc 20434250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 20477514 - 20477435
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||| ||||||  ||| |||||| | || ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  20477514 gcaaggagaaaggacagacatcaagaggcatcatcgacatcccaactaggttggcaccccgagatacctccatcctatgc 20477435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 17377499 - 17377573
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatg 288  Q
    |||||| |||||||||| |||||| |||| ||| ||| ||||||||||||||| ||  |||||| ||||||||||    
T  17377499 ggagagtggacatgcatcaagaggcaacaacgatatctcaactaggttggcaccccaagaaacctccatcctatg 17377573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 12102898 - 12102845
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttgg 263  Q
    ||||||||||||||||| ||| |||||| |||| |||||||||||||| |||||    
T  12102898 gcaaggagagaggacatacatcaagaggcaacatcgacatcccaactatgttgg 12102845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 13619093 - 13619138
Alignment:
Q  220 aggacatgcatgaagaggaaacaccgacatcccaactaggttggca 265  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||    
T  13619093 aggacatgcatcaagaggaaacactaacatcccaactaggttggca 13619138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 28522938 - 28522885
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    |||||||||||||  ||| |||||||||||  ||||||||||||||||||||||    
T  28522938 aggagagaggacagacatcaagaggaaacattgacatcccaactaggttggcac 28522885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 29216692 - 29216636
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    ||||||||||||||||||||| |||||| | || ||||||||||| || ||||||||    
T  29216692 gcaaggagagaggacatgcatcaagaggcatcatcgacatcccaattaagttggcac 29216636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 29329991 - 29329935
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    ||||||||||||||||||||| |||||| | || ||||||||||| || ||||||||    
T  29329991 gcaaggagagaggacatgcatcaagaggcatcatcgacatcccaattaagttggcac 29329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 17679703 - 17679782
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| |||||  ||| ||| || | || ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  17679703 gcaaggagagtggacaaacatcaagcggcatcatcgacatcccaactaggttggcaccccgagacacctccatcctatgc 17679782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 22169955 - 22170034
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||| |||||| | || | ||||||||| ||||||||||  ||| || ||| |||||||||||    
T  22169955 gcaaggagagaggacaggcatcaagaggcatcatcaacatcccaattaggttggcatcccgagagacctccatcctatgc 22170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 28948931 - 28948893
Alignment:
Q  239 aacaccgacatcccaactaggttggcacaccgggaaacc 277  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  28948931 aacaccgacatcccaactatgttggcaccccgggaaacc 28948893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 6083802 - 6083769
Alignment:
Q  232 aagaggaaacaccgacatcccaactaggttggca 265  Q
    ||||||||||||||||||||| ||||||||||||    
T  6083802 aagaggaaacaccgacatcccgactaggttggca 6083769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 32234445 - 32234494
Alignment:
Q  240 acaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||||||||||||||  |||||| || || ||||||||    
T  32234445 acaccgacatcccaactaggttggcacctcgggaagcctccgtcctatgc 32234494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 38376856 - 38376909
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    ||||||| |||||||||| |||||| | || |||||||| ||||||||||||||    
T  38376856 aggagagtggacatgcatcaagaggtatcatcgacatcctaactaggttggcac 38376909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 274
Target Start/End: Original strand, 24933718 - 24933750
Alignment:
Q  242 accgacatcccaactaggttggcacaccgggaa 274  Q
    ||||||||||||||||||||||||| |||||||    
T  24933718 accgacatcccaactaggttggcactccgggaa 24933750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0437 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0437
Description:

Target: scaffold0437; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 11499 - 11424
Alignment:
Q  214 ggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||  ||| |||||| |||||||||||||||||||||||||||| ||||||| || |||||||||||    
T  11499 ggagagaggacaaacatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgc 11424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0437; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 14319 - 14398
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||  ||| |||||| | || ||||||||||||||||||||||  ||| || ||| |||||||||||    
T  14319 gcaaggagagaggacagacatcaagaggcatcatcgacatcccaactaggttggcatcccgagagacctccatcctatgc 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 26544 - 26464
Alignment:
Q  206 ctaggcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    |||||||| ||||||||||||||||  |||||||||||| ||||||| | ||||||||||  |||||||||| |||||||||    
T  26544 ctaggcaaagagagaggacatgcatcgagaggaaacaccaacatccc-attaggttggcatcccgggaaacctccatcctat 26464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 296 - 375
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||| ||||||||||||||| |||||| |||| |||| | |||||||| ||||||| ||| |||||| |||||||||||    
T  296 gcaagaagagaggacatgcatcaagaggcaacatcgacttaccaactagtttggcaccccgagaaacctccatcctatgc 375  T

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Target: scaffold0114 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 2976 - 3042
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    |||||||||| ||||||||||||||||||||| | ||||||||||  ||||| |||| |||||||||    
T  2976 ggacatgcatcaagaggaaacaccgacatcccgattaggttggcatcccggggaacctccatcctat 3042  T

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Target: scaffold0166 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 7998 - 8054
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacc 277  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  7998 ggacatgcatcaagaggaaataccgacatcccaactagattggcatcccgggaaacc 8054  T

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Target: scaffold0911 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0911
Description:

Target: scaffold0911; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 2208 - 2287
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||| || ||||||  ||| || ||||||||||||| | |||||||| ||||||| |||||||||| |||||||||||    
T  2208 gcaaggggaaaggacagacatcaaaaggaaacaccgacgttccaactagattggcaccccgggaaacctccatcctatgc 2287  T

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Target: scaffold0886 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 2865 - 2792
Alignment:
Q  216 agagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||| |||| ||| |||||| |||| |||||||||||||||||||| ||  || |||||| |||||||||||    
T  2865 agagagaacatacatcaagaggcaacatcgacatcccaactaggttggtacctcgagaaacctccatcctatgc 2792  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 103773 - 103716
Alignment:
Q  232 aagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||| |||| ||||||||||||||||||||||| ||| |||| | |||||||||||    
T  103773 aagaggcaacatcgacatcccaactaggttggcaccccgagaaatctccatcctatgc 103716  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 52774 - 52721
Alignment:
Q  234 gaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctat 287  Q
    ||||||||||||| |||||||||||||||||||   |||||||| || ||||||    
T  52774 gaggaaacaccgaaatcccaactaggttggcaccttgggaaacctccgtcctat 52721  T

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Target: scaffold0292 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 21309 - 21253
Alignment:
Q  210 gcaaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttggcac 266  Q
    |||||||||| ||||| |||| |||||| | || |||||||||||||||||||||||    
T  21309 gcaaggagagtggacaggcatcaagaggcatcatcgacatcccaactaggttggcac 21253  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 36662 - 36714
Alignment:
Q  211 caaggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttgg 263  Q
    ||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||    
T  36662 caaggagagagtacatacatcaagaggcaacatcgacatcccaactaggttgg 36714  T

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Target: scaffold0195 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 9000 - 9054
Alignment:
Q  234 gaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||||||||||||||  |||||||||| || ||||||||    
T  9000 gaggaaacaccgacataccaactaggttggca-tccgggaaacctccgtcctatgc 9054  T

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Target: scaffold0195; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 289
Target Start/End: Original strand, 14389 - 14443
Alignment:
Q  234 gaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||| |||||||||||||||  |||||||||| || ||||||||    
T  14389 gaggaaacaccgacataccaactaggttggca-tccgggaaacctccgtcctatgc 14443  T

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Target: scaffold0356 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 13781 - 13735
Alignment:
Q  243 ccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||||||||||||||||| |||||||||  || ||||||||    
T  13781 ccgacatcccaactaggttggcaccccgggaaacttccgtcctatgc 13735  T

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Target: scaffold0196 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 831 - 797
Alignment:
Q  232 aagaggaaacaccgacatcccaactaggttggcac 266  Q
    |||||| ||||||||||||||||||||||||||||    
T  831 aagaggcaacaccgacatcccaactaggttggcac 797  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 80411 - 80345
Alignment:
Q  223 acatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||| || | |||||| | ||||||||||||||||||||| ||| |||| | |||||||||||    
T  80411 acatgcatcaacatgaaacagcaacatcccaactaggttggcaccccgcgaaatctccatcctatgc 80345  T

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Target: scaffold0265 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 19591 - 19636
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  19591 cgacatcccaactaggttggcaccccgagacacctccatcctatgc 19636  T

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Target: scaffold0257 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 16282 - 16233
Alignment:
Q  213 aggagagaggacatgcatgaagaggaaacaccgacatcccaactaggttg 262  Q
    |||||| |||||||| || ||||| || ||||||||||||||||||||||    
T  16282 aggagaaaggacatgtatcaagagaaagcaccgacatcccaactaggttg 16233  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 129476 - 129431
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  129476 cgacatcccaactaggttggcaccccgagacacctccatcctatgc 129431  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 307293 - 307248
Alignment:
Q  244 cgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    ||||||||||||||||||||||| ||| || ||| |||||||||||    
T  307293 cgacatcccaactaggttggcaccccgagacacctccatcctatgc 307248  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 265
Target Start/End: Original strand, 29985 - 30013
Alignment:
Q  237 gaaacaccgacatcccaactaggttggca 265  Q
    |||||||||||||||||||||||||||||    
T  29985 gaaacaccgacatcccaactaggttggca 30013  T

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Target: scaffold0111 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 41235 - 41303
Alignment:
Q  221 ggacatgcatgaagaggaaacaccgacatcccaactaggttggcacaccgggaaacccccatcctatgc 289  Q
    |||||||||| ||| |||| || ||| ||||||||||||||||||| |||   ||||| ||||||||||    
T  41235 ggacatgcatcaaggggaagcaacgaaatcccaactaggttggcaccccgcagaaccctcatcctatgc 41303  T

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