View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9706_high_29 (Length: 286)
Name: NF9706_high_29
Description: NF9706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9706_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 17 - 272
Target Start/End: Complemental strand, 40761666 - 40761411
Alignment:
| Q |
17 |
agtaactcaacaaggttgcatctttgtatgatatctttcagaatatatggatgatttgccttaaacatatcccacattttgattgggtggttggttctgg |
116 |
Q |
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| T |
40761666 |
agtaactcaacaaggttgcatctttgtatgatatctttcagaatatatggttgatttgccttaaacatatcccacattttgattgggtggttggttctgg |
40761567 |
T |
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| Q |
117 |
tggaattatatcatttgggagggttatcctgcaattatgctatcacatatttcattcattaatttgttaatgaacaaacattagatgatgataaataagt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40761566 |
tggaattatatcatttgggagggttatcctgcaattatgctatcacatatttcattcattaatttgttaatgaacaaacattagatgatgataaataagt |
40761467 |
T |
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| Q |
217 |
tatgttctttgggggcatgttatgtagtagatgtgttttagaagccaaagtctgtg |
272 |
Q |
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| T |
40761466 |
tatgttctttgggggcatgttatgtagtagatgtgttttagaagccaaagtctgtg |
40761411 |
T |
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