View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9706_high_32 (Length: 273)
Name: NF9706_high_32
Description: NF9706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9706_high_32 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 45404431 - 45404689
Alignment:
| Q |
1 |
agtcatctaaatgtgcattaccaaatcaaaatgatctaccctaaaaatatataattcacaaaatatttgcccctttctctcttaaataaatgtcacatat |
100 |
Q |
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| T |
45404431 |
agtcatctaaatgtgcattaccaaatcaaaatgacctaccctaaaaatatataattcacaaaatatttgcccctttctctcttaaataaatgtcacatat |
45404530 |
T |
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| Q |
101 |
tgtaaagataacattaacaaagacaaataatttaaaccctccgaaagaaatggttcaatcaatttagttacaataccatgacaagcactaaatgccatgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45404531 |
tgtaaagataacattaacaaagacaaataatttaaaccctccgaaagaaatggttcaatcaatttagttacaataccatgacaagcactaaatgccatgt |
45404630 |
T |
|
| Q |
201 |
gagtcagatccaccaaattagtacttctgctatactagtacaattacaagttttgttcc |
259 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
45404631 |
gagtcagatccaccaaattagtacttctgcgatactagtacaattacaagttttgttcc |
45404689 |
T |
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