View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9708_low_13 (Length: 286)

Name: NF9708_low_13
Description: NF9708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9708_low_13
NF9708_low_13
[»] chr3 (22 HSPs)
chr3 (14-274)||(14865711-14865971)
chr3 (12-274)||(12033375-12033636)
chr3 (12-274)||(17131595-17131857)
chr3 (14-273)||(19235002-19235257)
chr3 (149-274)||(23370435-23370560)
chr3 (132-274)||(51301572-51301715)
chr3 (72-261)||(13302185-13302372)
chr3 (72-261)||(13312841-13313028)
chr3 (72-261)||(13323732-13323920)
chr3 (145-218)||(10389429-10389502)
chr3 (145-218)||(10414518-10414591)
chr3 (145-218)||(10421188-10421261)
chr3 (152-245)||(24933787-24933880)
chr3 (65-203)||(17240513-17240652)
chr3 (149-203)||(9534328-9534382)
chr3 (149-203)||(18929246-18929300)
chr3 (149-201)||(20247791-20247843)
chr3 (149-201)||(24192957-24193009)
chr3 (152-204)||(41455097-41455149)
chr3 (191-274)||(10555353-10555434)
chr3 (149-204)||(16801467-16801521)
chr3 (149-203)||(14762758-14762812)
[»] scaffold0053 (1 HSPs)
scaffold0053 (14-274)||(79419-79680)
[»] chr1 (10 HSPs)
chr1 (13-274)||(20851062-20851323)
chr1 (13-274)||(20857689-20857950)
chr1 (13-274)||(21706140-21706401)
chr1 (12-274)||(21710682-21710943)
chr1 (151-245)||(20044910-20045004)
chr1 (130-203)||(18712780-18712854)
chr1 (149-203)||(20437024-20437078)
chr1 (149-203)||(32651573-32651627)
chr1 (152-204)||(41112038-41112090)
chr1 (149-203)||(19663517-19663571)
[»] chr8 (8 HSPs)
chr8 (13-274)||(24320600-24320861)
chr8 (26-203)||(29643386-29643564)
chr8 (149-274)||(44477623-44477749)
chr8 (149-274)||(44492781-44492907)
chr8 (118-203)||(18614240-18614327)
chr8 (65-203)||(23482053-23482192)
chr8 (149-201)||(8727735-8727787)
chr8 (152-204)||(23866618-23866670)
[»] chr7 (26 HSPs)
chr7 (14-274)||(16090940-16091201)
chr7 (12-274)||(20906391-20906652)
chr7 (14-274)||(29181038-29181299)
chr7 (104-274)||(2971209-2971379)
chr7 (12-110)||(2966828-2966926)
chr7 (145-274)||(14319559-14319688)
chr7 (32-264)||(2465246-2465474)
chr7 (145-274)||(14230777-14230906)
chr7 (32-264)||(3857308-3857536)
chr7 (149-274)||(14567204-14567329)
chr7 (151-218)||(31155396-31155463)
chr7 (149-203)||(11382871-11382925)
chr7 (149-203)||(11389348-11389402)
chr7 (149-211)||(21230952-21231014)
chr7 (149-204)||(14422985-14423040)
chr7 (149-203)||(16009577-16009631)
chr7 (152-204)||(12590643-12590695)
chr7 (152-204)||(13007435-13007487)
chr7 (149-205)||(20311050-20311106)
chr7 (149-203)||(13679494-13679548)
chr7 (149-203)||(15168176-15168230)
chr7 (152-204)||(12709843-12709895)
chr7 (152-204)||(13122914-13122966)
chr7 (152-204)||(13743712-13743764)
chr7 (149-201)||(16677296-16677348)
chr7 (149-201)||(17651532-17651584)
[»] chr5 (21 HSPs)
chr5 (13-274)||(19236765-19237025)
chr5 (13-274)||(22461020-22461281)
chr5 (13-274)||(22467644-22467905)
chr5 (12-273)||(20772834-20773090)
chr5 (12-273)||(20781609-20781865)
chr5 (26-273)||(24929862-24930105)
chr5 (26-274)||(28909220-28909466)
chr5 (26-274)||(28945615-28945861)
chr5 (26-274)||(28895972-28896218)
chr5 (26-274)||(28924798-28925044)
chr5 (26-274)||(28889268-28889514)
chr5 (35-212)||(20820105-20820279)
chr5 (35-212)||(20827205-20827379)
chr5 (26-211)||(34829962-34830146)
chr5 (149-269)||(38144472-38144591)
chr5 (65-203)||(18407944-18408083)
chr5 (65-203)||(23111200-23111339)
chr5 (149-205)||(22438746-22438802)
chr5 (149-203)||(19512387-19512441)
chr5 (149-203)||(28370055-28370109)
chr5 (152-204)||(23528634-23528686)
[»] scaffold0072 (1 HSPs)
scaffold0072 (14-274)||(49899-50161)
[»] chr6 (26 HSPs)
chr6 (13-274)||(20007877-20008138)
chr6 (14-273)||(9099005-9099260)
chr6 (32-264)||(21364423-21364650)
chr6 (32-264)||(23968405-23968632)
chr6 (26-274)||(31252300-31252549)
chr6 (151-274)||(11288601-11288721)
chr6 (151-218)||(15458492-15458559)
chr6 (151-218)||(15465087-15465154)
chr6 (149-274)||(34639915-34640041)
chr6 (149-274)||(34646589-34646715)
chr6 (176-274)||(28288442-28288537)
chr6 (149-211)||(10986173-10986235)
chr6 (186-274)||(24563475-24563564)
chr6 (149-204)||(29614146-29614201)
chr6 (149-203)||(4477858-4477912)
chr6 (149-203)||(23839199-23839253)
chr6 (149-211)||(24512836-24512898)
chr6 (152-204)||(12168366-12168418)
chr6 (152-204)||(19287275-19287327)
chr6 (152-204)||(19785869-19785921)
chr6 (152-204)||(19878459-19878511)
chr6 (242-274)||(24641612-24641644)
chr6 (149-204)||(930095-930150)
chr6 (149-204)||(18800438-18800493)
chr6 (151-203)||(9187498-9187550)
chr6 (152-204)||(19884235-19884287)
[»] scaffold0023 (1 HSPs)
scaffold0023 (14-274)||(135304-135563)
[»] chr2 (14 HSPs)
chr2 (12-253)||(25180880-25181121)
chr2 (13-251)||(10441-10679)
chr2 (145-274)||(27207649-27207778)
chr2 (145-274)||(26885179-26885307)
chr2 (26-274)||(23168229-23168480)
chr2 (26-274)||(23579486-23579737)
chr2 (65-203)||(23265058-23265197)
chr2 (65-203)||(23280126-23280265)
chr2 (186-274)||(27366477-27366566)
chr2 (152-274)||(5705952-5706075)
chr2 (149-203)||(6483718-6483772)
chr2 (149-203)||(6487185-6487239)
chr2 (149-203)||(21908360-21908414)
chr2 (152-204)||(26583830-26583882)
[»] chr4 (7 HSPs)
chr4 (14-242)||(16146791-16147020)
chr4 (26-211)||(27906142-27906328)
chr4 (90-201)||(14486601-14486713)
chr4 (152-274)||(53483708-53483831)
chr4 (149-205)||(15408140-15408196)
chr4 (149-204)||(11848114-11848169)
chr4 (152-204)||(8045832-8045884)
[»] scaffold1318 (1 HSPs)
scaffold1318 (65-274)||(1842-2051)
[»] scaffold0348 (1 HSPs)
scaffold0348 (14-209)||(9201-9396)
[»] scaffold0131 (1 HSPs)
scaffold0131 (39-274)||(889-1121)
[»] scaffold0127 (1 HSPs)
scaffold0127 (65-274)||(10156-10364)
[»] scaffold1469 (1 HSPs)
scaffold1469 (26-218)||(1234-1424)
[»] scaffold0001 (1 HSPs)
scaffold0001 (70-274)||(492958-493162)
[»] scaffold0384 (1 HSPs)
scaffold0384 (33-245)||(16023-16233)
[»] scaffold0553 (2 HSPs)
scaffold0553 (149-274)||(10125-10250)
scaffold0553 (176-245)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (149-274)||(1455-1580)
[»] scaffold0029 (3 HSPs)
scaffold0029 (32-264)||(91144-91374)
scaffold0029 (32-264)||(96870-97100)
scaffold0029 (151-204)||(111885-111938)
[»] scaffold0609 (1 HSPs)
scaffold0609 (26-274)||(5786-6035)
[»] scaffold0720 (1 HSPs)
scaffold0720 (145-274)||(3332-3461)
[»] scaffold0183 (1 HSPs)
scaffold0183 (151-273)||(6-125)
[»] scaffold0261 (1 HSPs)
scaffold0261 (26-211)||(23562-23748)
[»] scaffold0249 (1 HSPs)
scaffold0249 (151-218)||(13880-13947)
[»] scaffold0026 (2 HSPs)
scaffold0026 (149-274)||(111686-111812)
scaffold0026 (149-204)||(11850-11905)
[»] scaffold0107 (1 HSPs)
scaffold0107 (12-211)||(40524-40725)
[»] scaffold0034 (1 HSPs)
scaffold0034 (26-211)||(73161-73347)
[»] scaffold0453 (1 HSPs)
scaffold0453 (145-208)||(10546-10609)
[»] scaffold0222 (1 HSPs)
scaffold0222 (65-203)||(16736-16875)
[»] scaffold0019 (1 HSPs)
scaffold0019 (26-205)||(135349-135530)
[»] scaffold2054 (1 HSPs)
scaffold2054 (151-204)||(717-770)
[»] scaffold0099 (1 HSPs)
scaffold0099 (26-202)||(12833-13019)
[»] scaffold0146 (1 HSPs)
scaffold0146 (65-203)||(13548-13687)
[»] scaffold0004 (1 HSPs)
scaffold0004 (130-203)||(116877-116951)
[»] scaffold0235 (1 HSPs)
scaffold0235 (150-261)||(22536-22646)
[»] scaffold0129 (1 HSPs)
scaffold0129 (152-274)||(45203-45326)
[»] scaffold0924 (1 HSPs)
scaffold0924 (149-204)||(750-805)
[»] scaffold0461 (1 HSPs)
scaffold0461 (65-203)||(8-147)
[»] scaffold0247 (1 HSPs)
scaffold0247 (149-204)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (149-204)||(30858-30913)
[»] scaffold0020 (1 HSPs)
scaffold0020 (130-203)||(101928-102002)
[»] scaffold0796 (2 HSPs)
scaffold0796 (152-245)||(1691-1784)
scaffold0796 (152-245)||(5714-5807)
[»] scaffold0310 (1 HSPs)
scaffold0310 (149-205)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (149-201)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (149-204)||(932-987)
scaffold0456 (149-204)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (149-204)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (145-203)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (149-203)||(1387-1441)
[»] scaffold0124 (1 HSPs)
scaffold0124 (149-203)||(34276-34330)
[»] scaffold1773 (1 HSPs)
scaffold1773 (152-213)||(1181-1242)
[»] scaffold0117 (2 HSPs)
scaffold0117 (151-204)||(1897-1950)
scaffold0117 (151-204)||(8574-8627)
[»] scaffold0058 (1 HSPs)
scaffold0058 (152-204)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (152-204)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 14 - 274
Target Start/End: Original strand, 14865711 - 14865971
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||||    
T  14865711 atcaacaacatggattaagaaatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattatt 14865810  T
Q  114 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 213  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14865811 ttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 14865910  T
Q  214 gacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14865911 gacaaatagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 14865971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 12 - 274
Target Start/End: Complemental strand, 12033636 - 12033375
Alignment:
Q  12 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 111  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12033636 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaaccctta 12033537  T
Q  112 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033536 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 12033437  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  12033436 aagacaa-aagcacatcaaatcagttcctaagttcttctctcttggtcttctctccttacctt 12033375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 12 - 274
Target Start/End: Original strand, 17131595 - 17131857
Alignment:
Q  12 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 111  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |    
T  17131595 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaa 17131694  T
Q  112 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131695 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 17131794  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131795 aagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 17131857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 273
Target Start/End: Complemental strand, 19235257 - 19235002
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    |||||||| || ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |    
T  19235257 atcaacaatatagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaat 19235160  T
Q  114 ttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19235159 ttcccaattttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaa 19235060  T
Q  213 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 273  Q
    ||| ||  ||  |||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  19235059 agataa--agtgcagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 19235002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 149 - 274
Target Start/End: Complemental strand, 23370560 - 23370435
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  23370560 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 23370461  T
Q  249 ctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||||||||||    
T  23370460 ctctcttggtcttctctccttgcctt 23370435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 51301572 - 51301715
Alignment:
Q  132 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagca 229  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||| |||||||    | ||||||     
T  51301572 gaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgcgaagacaaagaaaacacagc- 51301670  T
Q  230 aatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||  |||   |||||||||||||||||||||||||||||||||    
T  51301671 aatcgattctctagttcttctctcttggtcttctctccttgcctt 51301715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 261
Target Start/End: Complemental strand, 13302372 - 13302185
Alignment:
Q  72 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatta 170  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || |||| ||||| ||| ||||||| | || ||||||||||||||||||||| ||||||    
T  13302372 attcttacaccattcctttcgaagtcatcatcaaccctaaattcccca-ttttatcttcaagaacaatgcatttgattaattttcagaaattacatatta 13302274  T
Q  171 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtctt 261  Q
    ||| ||||||||||||||| |||||||||||||||||||   ||| ||  | ||||||||||||||||||| |||| |||| |||| ||||    
T  13302273 tgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagcaaatcagttcctaggttcatctcccttgttctt 13302185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 261
Target Start/End: Complemental strand, 13313028 - 13312841
Alignment:
Q  72 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatta 170  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || ||| |||||| ||| ||||||| | || |||||||||||||| |||||| ||||||    
T  13313028 attcttacaccattcctttcgaagtcatcatcaaccctaaatt-ccctattttatcttcaagaacaatccatttgattaattttcaaaaattacatatta 13312930  T
Q  171 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtctt 261  Q
    ||| ||||||||||||||| |||||||||||||||||||   ||| ||  | ||||||||||||||||||| |||| |||| |||| ||||    
T  13312929 tgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagcaaatcagttcctaggttcatctcccttgttctt 13312841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 72 - 261
Target Start/End: Complemental strand, 13323920 - 13323732
Alignment:
Q  72 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatatt 169  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || |||||||||| ||| ||||||| |  |||| ||||||||||||||||||| |||||    
T  13323920 attcttacaccattcctttcgaagtcatcatcaaccctaaatt-cccaattttatcttcaagaacaatctaatttgattaattttcagaaattacatatt 13323822  T
Q  170 atgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtctt 261  Q
    |||| ||||||||||||||| |||||||||||||||||||   ||| ||  |   ||||||||||||||||| ||||||||| |||| ||||    
T  13323821 atgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaaatcagcaaatcagttcctaggttcttctcccttgttctt 13323732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 10389502 - 10389429
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 218  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10389429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 10414591 - 10414518
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 218  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10414518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 10421261 - 10421188
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 218  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10421188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 24933880 - 24933787
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 245  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| |   | ||||| ||| ||||||||| |||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtaggaagaattaacaccgcaaatcagctcctaagtt 24933787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 17240652 - 17240513
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 161  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  17240652 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 17240555  T
Q  162 tatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  17240554 tatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  9534328 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 18929246 - 18929300
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18929246 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  20247843 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  24192957 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 10555353 - 10555434
Alignment:
Q  191 cacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||| ||| ||||  || ||  ||||||| | |||||| |||||||||||||||||||| |||||||||    
T  10555353 cacccttaccttagaattgtaaacacaaa-agtacgacaaatcaatccctaagctcttctctcttggtcttctc-ccttgcctt 10555434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 16801521 - 16801467
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||||||||| |||| |||||| ||||| || ||||||||||||||    
T  16801521 aattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 14762812 - 14762758
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  14762812 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 274
Target Start/End: Complemental strand, 79680 - 79419
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  79680 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 79581  T
Q  114 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 213  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  79580 ttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 79481  T
Q  214 gacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  79480 gacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 79419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 13 - 274
Target Start/End: Complemental strand, 20851323 - 20851062
Alignment:
Q  13 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 112  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20851323 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20851224  T
Q  113 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851223 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20851124  T
Q  213 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851123 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 20851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 274
Target Start/End: Complemental strand, 20857950 - 20857689
Alignment:
Q  13 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 112  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20857950 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20857851  T
Q  113 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857850 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20857751  T
Q  213 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857750 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 20857689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 274
Target Start/End: Original strand, 21706140 - 21706401
Alignment:
Q  13 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 112  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  21706140 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 21706239  T
Q  113 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706240 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 21706339  T
Q  213 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706340 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 21706401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 274
Target Start/End: Original strand, 21710682 - 21710943
Alignment:
Q  12 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 111  Q
    ||||||||||||| ||||||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||||| |    
T  21710682 acatcaacaacatagattaaggaatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaa 21710780  T
Q  112 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710781 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 21710880  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710881 aagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 21710943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 20045004 - 20044910
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 245  Q
    ||||||||| |||||||||| ||  |||||| ||||||||||||||||||||||||||| |   | ||||| ||||||||||||| |||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 20044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 18712780 - 18712854
Alignment:
Q  130 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||    
T  18712780 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  20437078 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 32651573 - 32651627
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  32651573 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 19663571 - 19663517
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  19663571 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 274
Target Start/End: Complemental strand, 24320861 - 24320600
Alignment:
Q  13 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 112  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| | |||||||||||||||||||||||| |||||||| |     
T  24320861 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccctataccttttctttcaaaatcatccttaaccctaaa 24320762  T
Q  113 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320761 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 24320662  T
Q  213 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320661 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 24320600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 203
Target Start/End: Complemental strand, 29643564 - 29643386
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 125  Q
    ||||||||||||||||| | || |||| |||||||  |  ||||  ||||||| |||  | ||| | |||||||||| |||||||| || | ||||||||    
T  29643564 gattaagaaatcatactgaacaccaaattacaacacaattaacccaattcttacaccaatccttcctaaatcatcatcaacccttaatt-ctcaatttta 29643466  T
Q  126 ccttaa-gaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
     ||| | ||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  29643465 tcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 274
Target Start/End: Original strand, 44477623 - 44477749
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 246  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    | |||||| ||||  |||   |||||    
T  44477623 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44477721  T
Q  247 ttctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||||||||||||    
T  44477722 ttctctcttggtcttctctccttgcctt 44477749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 274
Target Start/End: Original strand, 44492781 - 44492907
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 246  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    | |||||| ||||  |||   |||||    
T  44492781 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44492879  T
Q  247 ttctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||||||||||||    
T  44492880 ttctctcttggtcttctctccttgcctt 44492907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 18614240 - 18614327
Alignment:
Q  118 caattttacctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||||| ||| ||||||| |||||||| || |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18614240 caattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 23482192 - 23482053
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 161  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23482192 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23482095  T
Q  162 tatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23482094 tatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 201  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 23866618 - 23866670
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23866618 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 274
Target Start/End: Original strand, 16090940 - 16091201
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16090940 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 16091039  T
Q  114 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 213  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16091040 ttcccaattttaccttaggaacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 16091139  T
Q  214 gacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16091140 gacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 16091201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 12 - 274
Target Start/End: Complemental strand, 20906652 - 20906391
Alignment:
Q  12 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 111  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  20906652 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaaccctta 20906553  T
Q  112 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
     || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20906552 att-cccaattttaccttaagaatagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 20906454  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    | ||||| |||| ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20906453 aggacaaatagctcagcaaatccgttcctaagttcttctctcttggtcttctccccttgcctt 20906391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 274
Target Start/End: Complemental strand, 29181299 - 29181038
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  29181299 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttatt 29181200  T
Q  114 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 213  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29181199 ttccaaattttaccttaagaatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 29181100  T
Q  214 gacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29181099 gacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 29181038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 104 - 274
Target Start/End: Original strand, 2971209 - 2971379
Alignment:
Q  104 aacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2971209 aacccttatcttcccaattttaccttaagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T
Q  204 gaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2971309 gaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 2971379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 2966828 - 2966926
Alignment:
Q  12 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2966828 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 145 - 274
Target Start/End: Complemental strand, 14319688 - 14319559
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 244  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  14319688 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 14319589  T
Q  245 tcttctctcttggtcttctctccttgcctt 274  Q
    ||||||||||| ||||||||||||||||||    
T  14319588 tcttctctcttagtcttctctccttgcctt 14319559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 32 - 264
Target Start/End: Original strand, 2465246 - 2465474
Alignment:
Q  32 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 131  Q
    ||||||||| ||||||||||| || ||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| || | ||||||| |||    
T  2465246 gaaatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttaccataa 2465343  T
Q  132 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 231  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | ||||||| ||| ||||||||||||||||||||||||||||| ||  ||  |||||||    
T  2465344 aaacagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattgcaaagataa--agtgcagcaaa 2465441  T
Q  232 tcagttcctaagttcttctctcttggtcttctc 264  Q
     || || ||||| ||||||||||||||||||||    
T  2465442 ccaatttctaagctcttctctcttggtcttctc 2465474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 145 - 274
Target Start/End: Original strand, 14230777 - 14230906
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 244  Q
    ||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||  |||||  |||||| ||||||||||    
T  14230777 gattaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagt 14230876  T
Q  245 tcttctctcttggtcttctctccttgcctt 274  Q
    ||| ||||||||||||||||||||||||||    
T  14230877 tctcctctcttggtcttctctccttgcctt 14230906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 264
Target Start/End: Complemental strand, 3857536 - 3857308
Alignment:
Q  32 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 128  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  3857536 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 3857440  T
Q  129 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc 228  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||| |||| ||  ||  ||||    
T  3857439 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc-aagataa--agtgcagc 3857344  T
Q  229 aaatcagttcctaagttcttctctcttggtcttctc 264  Q
    ||| || || ||||| ||||||||||||||||||||    
T  3857343 aaaccaatttctaagctcttctctcttggtcttctc 3857308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 149 - 274
Target Start/End: Original strand, 14567204 - 14567329
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 248  Q
    ||||||||||||  ||||||||| |  |||||| | ||  | ||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  14567204 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 14567303  T
Q  249 ctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||| ||||||||||||    
T  14567304 ctctcttggtcttttctccttgcctt 14567329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 31155396 - 31155463
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 218  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 31155463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11382925 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11389402 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 21231014 - 21230952
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
    ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  21231014 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 21230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  14422985 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  16009577 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 205  Q
    |||||||||||||||||  |||||| |||||| ||||| || |||||||||||||||    
T  20311106 aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 13679494 - 13679548
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  13679494 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 15168176 - 15168230
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  15168176 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 12709895 - 12709843
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12709895 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 13122966 - 13122914
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13122966 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 13743712 - 13743764
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13743712 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 16677296 - 16677348
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 201  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  16677296 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 17651532 - 17651584
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 201  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  17651532 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 13 - 274
Target Start/End: Original strand, 19236765 - 19237025
Alignment:
Q  13 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 112  Q
    |||||||||||| |||||||||  |||||||| | ||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  19236765 catcaacaacatagattaagaacacatactaaac-tcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 19236863  T
Q  113 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236864 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 19236963  T
Q  213 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236964 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 19237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 274
Target Start/End: Original strand, 22461020 - 22461281
Alignment:
Q  13 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 112  Q
    |||||||||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |     
T  22461020 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaa 22461118  T
Q  113 tttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22461119 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22461218  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22461219 aagacaaaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgcctt 22461281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 274
Target Start/End: Original strand, 22467644 - 22467905
Alignment:
Q  13 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 112  Q
    |||||||||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |     
T  22467644 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaa 22467742  T
Q  113 tttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22467743 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22467842  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22467843 aagacaaaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgcctt 22467905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 12 - 273
Target Start/End: Original strand, 20772834 - 20773090
Alignment:
Q  12 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 111  Q
    |||||||||| || || || ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| |    
T  20772834 acatcaacaatatagagtaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaa 20772931  T
Q  112 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20772932 atttcccaattttaccttaagaacagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgca 20773031  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 273  Q
    |||| ||  || ||||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  20773032 aagataa--agtacagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 20773090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 273
Target Start/End: Original strand, 20781609 - 20781865
Alignment:
Q  12 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 111  Q
    |||||||||| || || || ||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| |    
T  20781609 acatcaacaatatagagtaggaaatcataataatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaa 20781706  T
Q  112 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  20781707 atttcccaattttaccttaagaacagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgca 20781806  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 273  Q
    |||| ||  || ||||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  20781807 aagataa--agtacagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 20781865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 26 - 273
Target Start/End: Complemental strand, 24930105 - 24929862
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 125  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||| ||| || |||||||||||||||| | |||||||||||||    
T  24930105 gattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaatttta 24930008  T
Q  126 ccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 224  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||  ||      
T  24930007 ccttaagaacagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgtaaagataa--agtg 24929910  T
Q  225 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 273  Q
    |||||| ||| |||||||| |||||||||||||||||||| ||||||||    
T  24929909 cagcaagtcaattcctaagctcttctctcttggtcttctc-ccttgcct 24929862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 28909466 - 28909220
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 124  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28909466 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28909369  T
Q  125 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 224  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||    
T  28909368 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagca 28909270  T
Q  225 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28909269 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28909220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 28945861 - 28945615
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 124  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28945861 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28945764  T
Q  125 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 224  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||    
T  28945763 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagca 28945665  T
Q  225 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28945664 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28945615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 28896218 - 28895972
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 124  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28896218 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28896121  T
Q  125 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 224  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28896120 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28896022  T
Q  225 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28896021 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28895972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 28925044 - 28924798
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 124  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28925044 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28924947  T
Q  125 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 224  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28924946 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28924848  T
Q  225 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28924847 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28924798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 28889514 - 28889268
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 124  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28889514 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28889417  T
Q  125 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 224  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28889416 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28889318  T
Q  225 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
      |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28889317 atgcaaatcaattcctaggttcttctctcttggtcttctctccttgcctt 28889268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 20820105 - 20820279
Alignment:
Q  35 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 134  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20820105 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20820201  T
Q  135 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20820202 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 20827205 - 20827379
Alignment:
Q  35 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 134  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20827205 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20827301  T
Q  135 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20827302 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 34829962 - 34830146
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 124  Q
    ||||||||||||||||| ||||||||| |||||||    |||| ||||||||| | |||| |||||||||||| ||| | ||||| ||| ||  ||||||    
T  34829962 gattaagaaatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaattctc--aatttt 34830058  T
Q  125 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
    | ||| ||||||  ||| ||| |||| |||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||    
T  34830059 atcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 38144591 - 38144472
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagca-aatcagttcctaagttct 247  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||  ||||| | |  |||| ||||||| |||| |||||||||||||    
T  38144591 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga-atgatta-cacagcacaatcggttcctaagttct 38144494  T
Q  248 tctctcttggtcttctctcctt 269  Q
    ||||||||||||||||||||||    
T  38144493 tctctcttggtcttctctcctt 38144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 18408083 - 18407944
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 161  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  18408083 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 18407986  T
Q  162 tatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||||||||| |||||| ||||| || |||||||||||||    
T  18407985 tatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 23111339 - 23111200
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 161  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23111339 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23111242  T
Q  162 tatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23111241 tatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 205  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||    
T  22438802 aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  19512387 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  28370109 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 14 - 274
Target Start/End: Complemental strand, 50161 - 49899
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    ||||||||||||||||||||||||||||||||| |  || || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50161 atcaacaacatggattaagaaatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 50062  T
Q  114 ttcccaatttt-accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    ||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50061 ttcccaatttttaccttaagaacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaa 49962  T
Q  213 agacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||| ||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||    
T  49961 agacaaatagcacaacaaaatcagttcctaagttcttctctcttggttttctctctttgcctt 49899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 274
Target Start/End: Complemental strand, 20008138 - 20007877
Alignment:
Q  13 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 112  Q
    ||||||||| || |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20008138 catcaacaatatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20008039  T
Q  113 tttcccaattttaccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20008038 tttcccaattttaccttaagaacagttcaattgattaatttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgca 20007939  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20007938 aagacaa-aagcacagcaaatgagttcctaagttcttctctcttggtcttctctccttgcctt 20007877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 273
Target Start/End: Complemental strand, 9099260 - 9099005
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    |||||||| || ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |    
T  9099260 atcaacaatatagattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaat 9099163  T
Q  114 ttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9099162 ttcccaattttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaa 9099063  T
Q  213 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 273  Q
    ||| ||  ||  |||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  9099062 agataa--agtgcagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 9099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 32 - 264
Target Start/End: Complemental strand, 21364650 - 21364423
Alignment:
Q  32 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 131  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| |||||||||||| |||    
T  21364650 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa 21364554  T
Q  132 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 231  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||  |||||||||||    
T  21364553 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaa-aagcacagcaaa 21364456  T
Q  232 tcagttcctaagttcttctctcttggtcttctc 264  Q
     || |||||| ||||||||||||||||||||||    
T  21364455 acaattcctaggttcttctctcttggtcttctc 21364423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 32 - 264
Target Start/End: Complemental strand, 23968632 - 23968405
Alignment:
Q  32 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 131  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| |||||||||||| |||    
T  23968632 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa 23968536  T
Q  132 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 231  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||  |||||||||||    
T  23968535 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaa-aagcacagcaaa 23968438  T
Q  232 tcagttcctaagttcttctctcttggtcttctc 264  Q
     || |||||| ||||||||||||||||||||||    
T  23968437 acaattcctaggttcttctctcttggtcttctc 23968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 274
Target Start/End: Original strand, 31252300 - 31252549
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 124  Q
    ||||||||||||||||  | ||||||| |||||||    |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  31252300 gattaagaaatcatacatagcatcaaattacaacacgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 31252396  T
Q  125 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--tt 220  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||||||||||||        
T  31252397 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaagaa 31252496  T
Q  221 agcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    | |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  31252497 aacacagc-aatcggttcctaagttcttctctcttggtcttctctccttgcctt 31252549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 151 - 274
Target Start/End: Complemental strand, 11288721 - 11288601
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 250  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||  | |||||| |||||||||||||| ||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaa-aaacacagc-aatcagttcctaagctcttct 11288624  T
Q  251 ctcttggtcttctctccttgcctt 274  Q
    |||||||||||||| |||||||||    
T  11288623 ctcttggtcttctc-ccttgcctt 11288601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 15458492 - 15458559
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 218  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15458559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 15465087 - 15465154
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 218  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 274
Target Start/End: Complemental strand, 34640041 - 34639915
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 246  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  34640041 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34639943  T
Q  247 ttctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||||||||||||    
T  34639942 ttctctcttggtcttctctccttgcctt 34639915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 274
Target Start/End: Complemental strand, 34646715 - 34646589
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 246  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  34646715 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34646617  T
Q  247 ttctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||||||||||||    
T  34646616 ttctctcttggtcttctctccttgcctt 34646589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 28288537 - 28288442
Alignment:
Q  176 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||||| ||||| || ||||||||||||||||||||||||||||  | |||||| |||||||||||||| | |||||||||||||||||| |||||||||    
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaa-aaacacagc-aatcagttcctaagcttttctctcttggtcttctc-ccttgcctt 28288442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
    |||||| |||||||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  10986235 aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca 10986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 274
Target Start/End: Original strand, 24563475 - 24563564
Alignment:
Q  186 aatcccacccttaccttagaattgcaaagacaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||| ||||||||||||||||||||||||||||  |   |||||||| ||  ||||  |||||||||||||||||||||||||||||||||    
T  24563475 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgcctt 24563564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  4477858 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  23839199 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||| |||||||| |||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca 24512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 274
Target Start/End: Complemental strand, 24641644 - 24641612
Alignment:
Q  242 agttcttctctcttggtcttctctccttgcctt 274  Q
    |||||||||||||||||||||||||||||||||    
T  24641644 agttcttctctcttggtcttctctccttgcctt 24641612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 930150 - 930095
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  930150 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 18800438 - 18800493
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||| ||||    
T  18800438 aattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 19884235 - 19884287
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||| |||||||    
T  19884235 tttcagaaattatagattatgattattgagagatagtctcaccctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 274
Target Start/End: Original strand, 135304 - 135563
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||  | |||||||||||||| |||||||||||||||||||||||||||||||| |    
T  135304 atcaacaacatagattaagaaatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaat 135402  T
Q  114 ttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    | | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  135403 t-ctcaattttacctttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaa 135501  T
Q  213 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  135502 agacaaatagcacagcaaatcagttcctaagctcttctctcttggtcttctctccttgcctt 135563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 25181121 - 25180880
Alignment:
Q  12 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 111  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| | || |||||||||   |||||||||||||||||||||||| |||||||| |    
T  25181121 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaaaaatataaacctgatcaatataccttttctttcaaaatcatccttaaccctaa 25181022  T
Q  112 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25181021 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 25180922  T
Q  212 aagacaattagcacagcaaatcagttcctaagttcttctctc 253  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  25180921 aagacaaaaagcacagcaaatcagttcctaagttcttctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 251
Target Start/End: Original strand, 10441 - 10679
Alignment:
Q  13 catcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 112  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| || |||||| || | |||||||||||||||||||||||| |||||||| |     
T  10441 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaa 10540  T
Q  113 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 212  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10541 tttcccaattttaccttaagaacaattcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaa 10640  T
Q  213 agacaattagcacagcaaatcagttcctaagttcttctc 251  Q
    ||||||  |||||||||||||||||||||||| ||||||    
T  10641 agacaaaaagcacagcaaatcagttcctaagtccttctc 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 145 - 274
Target Start/End: Complemental strand, 27207778 - 27207649
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 244  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  27207778 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 27207679  T
Q  245 tcttctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||||||||||||||    
T  27207678 tcttctctcttggtcttctctccttgcctt 27207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 145 - 274
Target Start/End: Original strand, 26885179 - 26885307
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 244  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||| ||||||||||    
T  26885179 gattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagt 26885277  T
Q  245 tcttctctcttggtcttctctccttgcctt 274  Q
    |||||||||||||| |||||||||||||||    
T  26885278 tcttctctcttggttttctctccttgcctt 26885307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 23168480 - 23168229
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 124  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23168480 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23168383  T
Q  125 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 219  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23168382 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23168284  T
Q  220 tagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
     ||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  23168283 aagcacagcaaaaccgtccctaagttcttctctcttggtcttctctccttgcctt 23168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 23579737 - 23579486
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 124  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23579737 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23579640  T
Q  125 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 219  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23579639 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23579541  T
Q  220 tagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
     ||||||||||| | || |||||||||||||||||||||||||||||||||||||    
T  23579540 aagcacagcaaaaccgtccctaagttcttctctcttggtcttctctccttgcctt 23579486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 23265058 - 23265197
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 162  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23265058 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23265156  T
Q  163 atatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23265157 atatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 23280126 - 23280265
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 162  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23280126 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23280224  T
Q  163 atatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23280225 atatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 27366566 - 27366477
Alignment:
Q  186 aatcccacccttaccttagaattgcaaagacaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    |||| ||||||||||||||||||||||||||||  |   |||||||| ||  ||||  |||||||||||||||||||||||||||||||||    
T  27366566 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgcctt 27366477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 274
Target Start/End: Complemental strand, 5706075 - 5705952
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 249  Q
    |||||| ||||||| ||||||| || ||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   ||||||||    
T  5706075 tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 5705977  T
Q  250 tctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||| |||||    
T  5705976 tctcttggtcttctctcctagcctt 5705952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6483718 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6487185 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  21908360 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 16147020 - 16146791
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    |||||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16147020 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 16146921  T
Q  114 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 213  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16146920 ttccaaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 16146821  T
Q  214 gacaattagcacagc-aaatcagttcctaa 242  Q
    ||||| ||||||||| ||||||||||||||    
T  16146820 gacaaatagcacagcaaaatcagttcctaa 16146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 27906142 - 27906328
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 124  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  27906142 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctc--aatttt 27906239  T
Q  125 acctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
    | ||| ||||||  ||| |||  |||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||    
T  27906240 atcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 14486601 - 14486713
Alignment:
Q  90 tcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataa 187  Q
    ||||||||||||| |||||| || |||||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||  |||||| ||||     
T  14486601 tcaaaatcatcatcaaccct-atattcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatag 14486699  T
Q  188 tcccacccttacct 201  Q
    || |||||||||||    
T  14486700 tctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 274
Target Start/End: Original strand, 53483708 - 53483831
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 249  Q
    |||||| ||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   ||||||||    
T  53483708 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 53483806  T
Q  250 tctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||| |||||    
T  53483807 tctcttggtcttctctcctagcctt 53483831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 15408140 - 15408196
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 205  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  15408140 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 11848114 - 11848169
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11848114 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 8045884 - 8045832
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 65 - 274
Target Start/End: Complemental strand, 2051 - 1842
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaatta 163  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  2051 aaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-cccaattttactttcaagaacagttcaattgattaattttcagaaatta 1953  T
Q  164 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttct 263  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  1952 tatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttct 1853  T
Q  264 ctccttgcctt 274  Q
    |||||||||||    
T  1852 ctccttgcctt 1842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 9201 - 9396
Alignment:
Q  14 atcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 113  Q
    ||||||||||| |||| |||||||||||||| ||||||| |||||||  | |||||| ||||||| |||||||||||||||||||||||||||||||| |    
T  9201 atcaacaacatagattgagaaatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaat 9300  T
Q  114 ttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 209  Q
    | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9301 t-cccaattttacttttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 39 - 274
Target Start/End: Original strand, 889 - 1121
Alignment:
Q  39 tactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagt 138  Q
    ||||||||||||||  ||||| ||| |||||| | ||||| || ||||||| |||||||  |||||||||| ||||||||||||||||| ||||||||||    
T  889 tactaatcatcaaac-acaactttataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccataagaacagt 986  T
Q  139 tcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttc 238  Q
    | ||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  987 taaattgcttaattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagacaa-aagcacagcaaatcaattc 1085  T
Q  239 ctaagttcttctctcttggtcttctctccttgcctt 274  Q
    ||| ||||||||||||||||||||||||||||||||    
T  1086 ctaggttcttctctcttggtcttctctccttgcctt 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 65 - 274
Target Start/End: Original strand, 10156 - 10364
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac-cttaagaacagttcaattgattaattttcagaaatta 163  Q
    |||| ||||||||| ||| |  |||||||||| | ||| |||||| |||  ||||||||||  || | ||||| ||||||||||||||||||||||||||    
T  10156 aaacatgattcttacaccatccctttcaaaattagcatcaaccctaatt--cccaattttattctcatgaacaattcaattgattaattttcagaaatta 10253  T
Q  164 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttct 263  Q
     ||||||||| ||||| ||||||||| ||||||||||||||||||| | ||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  10254 catattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttct 10353  T
Q  264 ctccttgcctt 274  Q
    |||||||||||    
T  10354 ctccttgcctt 10364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 1234 - 1424
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 125  Q
    ||||| ||||||||||||||||||||  || ||||||  |||||||| |||||  | ||||||| ||||||||||||||  ||| |||||||||||||||    
T  1234 gattaggaaatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttcccaatttta 1331  T
Q  126 ccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 218  Q
    |||||||||||||| ||||| ||||||||||||||  ||||||||  |||||||||||  |||||||||||||||||||||||||||||||||    
T  1332 ccttaagaacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaagacaa 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 70 - 274
Target Start/End: Complemental strand, 493162 - 492958
Alignment:
Q  70 tgattcttataccttttctttcaaaatcatcatta-acccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatat 166  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||| ||   |||||| ||  ||||||  ||| ||| |||||||||||||||||||||     
T  493162 tgattcttacaccttttctttcaaaatcagcattataccctaattctct--attttatctccaagaactattccattagattaattttcagaaattatac 493065  T
Q  167 attatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctc 266  Q
    |||| || ||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  493064 atta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttctctc 492966  T
Q  267 cttgcctt 274  Q
    ||||||||    
T  492965 cttgcctt 492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 33 - 245
Target Start/End: Complemental strand, 16233 - 16023
Alignment:
Q  33 aaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaag 132  Q
    |||||||||||||||||||| |||||||| |  ||||||||||||  || ||||||| ||||||||||||||||||| | || || | ||||| |||||     
T  16233 aaatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcatcattaaccctaaatt-ccaatttttatcttaaa 16137  T
Q  133 aacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 231  Q
    ||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |   | ||||| |||||||||    
T  16136 aacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaagaattaacacagcaaa 16037  T
Q  232 tcagttcctaagtt 245  Q
    |||| |||||||||    
T  16036 tcagctcctaagtt 16023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 149 - 274
Target Start/End: Complemental strand, 10250 - 10125
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  10250 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 10151  T
Q  249 ctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||||||||||    
T  10150 ctctcttggtcttctctccttgcctt 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 11111 - 11042
Alignment:
Q  176 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 245  Q
    |||||| ||||||||||||||||||||||||||  |   | ||||| ||||||||||||| |||||||||    
T  11111 attgaaggataatcccacccttaccttagaattttaggaagaattaacacagcaaatcagctcctaagtt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 149 - 274
Target Start/End: Complemental strand, 1580 - 1455
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  1580 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 1481  T
Q  249 ctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||||||||||    
T  1480 ctctcttggtcttctctccttgcctt 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 87; Significance: 9e-42; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 32 - 264
Target Start/End: Complemental strand, 91374 - 91144
Alignment:
Q  32 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 128  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  91374 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 91278  T
Q  129 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc 228  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||  ||  ||||    
T  91277 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataa--agtgcagc 91180  T
Q  229 aaatcagttcctaagttcttctctcttggtcttctc 264  Q
    ||| || || ||||| ||||||||||||||||||||    
T  91179 aaaccaatttctaagctcttctctcttggtcttctc 91144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 32 - 264
Target Start/End: Complemental strand, 97100 - 96870
Alignment:
Q  32 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 128  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  97100 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 97004  T
Q  129 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc 228  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||  ||  ||||    
T  97003 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataa--agtgcagc 96906  T
Q  229 aaatcagttcctaagttcttctctcttggtcttctc 264  Q
    ||| || || ||||| ||||||||||||||||||||    
T  96905 aaaccaatttctaagctcttctctcttggtcttctc 96870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

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Target: scaffold0609 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 26 - 274
Target Start/End: Complemental strand, 6035 - 5786
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 124  Q
    ||||||||||||||||  | ||||||| ||||||||   |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  6035 gattaagaaatcatacataacatcaaattacaacatgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 5939  T
Q  125 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--tt 220  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||        
T  5938 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaagaa 5839  T
Q  221 agcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 274  Q
    | |||||| |||| |||||  |||||||||||||||||||||||||||||||||    
T  5838 aacacagc-aatcggttccctagttcttctctcttggtcttctctccttgcctt 5786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 274
Target Start/End: Complemental strand, 3461 - 3332
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 244  Q
    ||||||||||||||||||||||||||     |||||||||||||  ||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  3461 gattaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaaagcacggcaaatccgttcctaagt 3362  T
Q  245 tcttctctcttggtcttctctccttgcctt 274  Q
    ||| |||||||||||||||||| |||||||    
T  3361 tctcctctcttggtcttctctcgttgcctt 3332  T

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Target: scaffold0183 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 273
Target Start/End: Original strand, 6 - 125
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 250  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||  ||  |||||| ||| |||||||| ||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaagtcaattcctaagctcttct 103  T
Q  251 ctcttggtcttctctccttgcct 273  Q
    |||||||||||||| ||||||||    
T  104 ctcttggtcttctc-ccttgcct 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 23748 - 23562
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 124  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||||||||| | ||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23748 gattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctc--aatttt 23651  T
Q  125 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
      ||| ||||||  |||  || ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||    
T  23650 gtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 13947 - 13880
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 218  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 13880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 274
Target Start/End: Original strand, 111686 - 111812
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 246  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  111686 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 111784  T
Q  247 ttctctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||||||||||||    
T  111785 ttctctcttggtcttctctccttgcctt 111812  T

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Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 211
Target Start/End: Complemental strand, 40725 - 40524
Alignment:
Q  12 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 111  Q
    |||||||||  || |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |    
T  40725 acatcaacattatagattaagaaatcattctgaacatcaaattacaacacgttaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaa 40626  T
Q  112 ttttcccaattttaccttaagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 209  Q
    ||| || | ||||| || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||    
T  40625 tttcccaatttttatctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttg 40526  T
Q  210 ca 211  Q
    ||    
T  40525 ca 40524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 73161 - 73347
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 124  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||| ||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  73161 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctc--aatttt 73258  T
Q  125 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 211  Q
    | ||| |||| |  | | ||| |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| | |||||||    
T  73259 atcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacctcataattgca 73347  T

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Target: scaffold0453 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 10609 - 10546
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatt 208  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||| ||||||||||||||    
T  10609 gattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 16736 - 16875
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 161  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  16736 aaacatgattcttaaaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 16833  T
Q  162 tatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  16834 tatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 205
Target Start/End: Original strand, 135349 - 135530
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 125  Q
    |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || | |||||    
T  135349 gattaagaaatcattctgaacatcaaattacaacacattaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaattttta 135448  T
Q  126 ccttaagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 205  Q
     || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  135449 tctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 717 - 770
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 12833 - 13019
Alignment:
Q  26 gattaagaaatcatactaatcatcaaagtacaacattaaaaacct-gattcttataccttttctttcaaaatcat-cattaacccttattttccc--aat 121  Q
    ||||| |||||||||||||||||  || |||||||||| |||||| ||||||||   | |||| |||| |||||| |||||||||| | ||||||  | |    
T  12833 gattaggaaatcatactaatcatacaaatacaacattataaacctagattcttaacacatttccttcagaatcatacattaaccctaaatttccccaatt 12932  T
Q  122 tttacc-ttaagaacagttcaa---ttgattaa-ttttcagaaattatatattatgactattg-aaagataatcccacccttacctt 202  Q
    |||||| |||||||||||| ||   | |||||| |||| |||||| ||||||||  ||||||| |||||||||||||||||||||||    
T  12933 tttacctttaagaacagttaaaatttagattaattttttagaaatcatatattagaactattgtaaagataatcccacccttacctt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 13548 - 13687
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 161  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  13548 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 13645  T
Q  162 tatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  13646 tatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 116877 - 116951
Alignment:
Q  130 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  116877 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 22646 - 22536
Alignment:
Q  150 attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc-aaatcagttcctaagttctt 248  Q
    |||||||||||||||||| ||||| |||||| ||||| || |||||||||||| || ||||  ||| |  | ||||||| ||||| ||||||| | ||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgc--agaaatattgcacagcaaaatcggttcctaggctctt 22549  T
Q  249 ctctcttggtctt 261  Q
    |||||||||||||    
T  22548 ctctcttggtctt 22536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 274
Target Start/End: Complemental strand, 45326 - 45203
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 249  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||| |||| |||||||    | |||||| ||||  |||   ||||||||    
T  45326 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 45228  T
Q  250 tctcttggtcttctctccttgcctt 274  Q
    ||||||||||||||||||| |||||    
T  45227 tctcttggtcttctctcctagcctt 45203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 147 - 8
Alignment:
Q  65 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 161  Q
    |||| ||||||||| ||| || |||||||||||| ||  |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  147 aaacatgattcttacaccattcctttcaaaatcagcaacaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 50  T
Q  162 tatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  49 tatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  30858 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 102002 - 101928
Alignment:
Q  130 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||| ||||||| ||| ||||||||| ||||||||| ||||| |||||| ||||| || |||||||||||||    
T  102002 aagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0796 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 1784 - 1691
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 245  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  1784 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 1691  T

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Target: scaffold0796; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 5807 - 5714
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 245  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  5807 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 5714  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 205  Q
    ||||||||||||||||| ||||||  |||||| ||||| || |||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  14450 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 932 - 987
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  932 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 8077 - 8132
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  8077 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 18170 - 18225
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  18170 aattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

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Target: scaffold1461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 1543 - 1485
Alignment:
Q  145 gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||||  |||||| ||  |||| ||||||||| |||||||||||||    
T  1543 gattaattttcagaaattgcatattaagatcattgcaagataatctcacccttacctta 1485  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 1387 - 1441
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  1387 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 34330 - 34276
Alignment:
Q  149 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 203  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  34330 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold1773 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 1181 - 1242
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 213  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  |||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaa 1242  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 1950 - 1897
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T

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Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 8627 - 8574
Alignment:
Q  151 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 294 - 346
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||||||||||| ||||||  |||||| ||||| || ||||||||||||||    
T  294 tttcagaaattatagattatggttattgagagatagtctcacccttaccttag 346  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 50182 - 50234
Alignment:
Q  152 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 204  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 50234  T

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