View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9708_low_15 (Length: 281)
Name: NF9708_low_15
Description: NF9708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9708_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 45514578 - 45514831
Alignment:
| Q |
18 |
gttgggagaataatcaagtatggtctgagataaatttgtcatccaacaaactaactggagcatttccaagctcattcgggaatctttcctcactgtattg |
117 |
Q |
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| T |
45514578 |
gttgggagaataatcaagtatggtctgagataaatttgtcatccaacaaactaactggagcatttccaagctcattcgggaatctttcctcactgtattg |
45514677 |
T |
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| Q |
118 |
gttgcatttgaaagataacaaccttcaaggagagcttccagggtcttttagaaatttgaagaaattgttgattttggatcttggtaacaatcaactatct |
217 |
Q |
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| T |
45514678 |
gttgcatttgaaagataacaaccttcaaggagagcttccagggtcttttagaaatttgaagaaattgttgattttggatcttggtaacaatcaactatct |
45514777 |
T |
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| Q |
218 |
ggaagtataccatcatcatggacagcaaacaccttcccttcattgcaaattctt |
271 |
Q |
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| T |
45514778 |
ggaagtataccatcatcatggacagcaaacaccttcccttcattgcaaattctt |
45514831 |
T |
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