View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9709_high_5 (Length: 227)
Name: NF9709_high_5
Description: NF9709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9709_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 931234 - 931022
Alignment:
| Q |
1 |
cggtgtatgtgcttcctaaagaaagtaataaaaaagcaaaatgttgggaattaccttaaaatggagaataatatgaccataatgcaagccaaccaagcag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
931234 |
cggtgtatgtgcttcctaaagaaagtaataaaaaagaaaaatgttgggaattaccttaaaatggagaataatatgaccataatgcaagccaaccaagcag |
931135 |
T |
|
| Q |
101 |
gtaacaattgccatcactgaactaaaattccataacagacacaaaattagagacaacaggaaaagct-----caccataatccatgctatataaatttca |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
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| T |
931134 |
gtaacaattgccatcactgaactaaaattccataacagacacaaaattagagacaacaggaaaagctcacctcaccataaaccatgctatataaatttca |
931035 |
T |
|
| Q |
196 |
atgaatttgaata |
208 |
Q |
| |
|
||||||||||||| |
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|
| T |
931034 |
atgaatttgaata |
931022 |
T |
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