View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9709_low_11 (Length: 272)

Name: NF9709_low_11
Description: NF9709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9709_low_11
NF9709_low_11
[»] chr3 (23 HSPs)
chr3 (28-258)||(32808311-32808541)
chr3 (46-258)||(46163980-46164187)
chr3 (46-258)||(33140438-33140645)
chr3 (58-258)||(26244870-26245065)
chr3 (46-258)||(26121951-26122159)
chr3 (120-258)||(3157822-3157956)
chr3 (45-258)||(12089151-12089360)
chr3 (46-258)||(2051629-2051835)
chr3 (46-179)||(36012651-36012782)
chr3 (46-179)||(43804125-43804256)
chr3 (41-179)||(45708678-45708814)
chr3 (58-179)||(26244173-26244292)
chr3 (44-179)||(46163817-46163949)
chr3 (72-253)||(43031152-43031324)
chr3 (113-258)||(55214127-55214269)
chr3 (57-175)||(55213976-55214092)
chr3 (46-258)||(45708442-45708647)
chr3 (80-179)||(32808182-32808280)
chr3 (87-179)||(2051508-2051598)
chr3 (46-179)||(12088989-12089120)
chr3 (69-161)||(12015031-12015121)
chr3 (87-150)||(7565632-7565692)
chr3 (213-258)||(36012575-36012620)
[»] chr7 (19 HSPs)
chr7 (57-258)||(35316004-35316200)
chr7 (46-258)||(26073143-26073350)
chr7 (46-258)||(33189882-33190088)
chr7 (46-258)||(26096930-26097137)
chr7 (46-258)||(36642607-36642814)
chr7 (46-240)||(32047233-32047422)
chr7 (47-253)||(25658388-25658589)
chr7 (46-179)||(26073381-26073512)
chr7 (46-179)||(26097168-26097299)
chr7 (46-179)||(35315842-35315973)
chr7 (45-179)||(47295-47427)
chr7 (59-179)||(33190119-33190237)
chr7 (113-258)||(47122-47264)
chr7 (139-258)||(527580-527694)
chr7 (46-163)||(32056626-32056740)
chr7 (46-179)||(7511079-7511198)
chr7 (114-153)||(24556176-24556215)
chr7 (113-153)||(5964232-5964272)
chr7 (46-129)||(21297713-21297794)
[»] chr4 (23 HSPs)
chr4 (46-258)||(4892385-4892590)
chr4 (46-258)||(22886582-22886789)
chr4 (46-258)||(22938246-22938453)
chr4 (46-258)||(4872546-4872751)
chr4 (113-258)||(45302485-45302627)
chr4 (46-258)||(51103364-51103571)
chr4 (46-179)||(35251623-35251754)
chr4 (46-175)||(39864090-39864217)
chr4 (113-258)||(35251450-35251592)
chr4 (46-179)||(51103602-51103733)
chr4 (89-258)||(43049141-43049305)
chr4 (77-258)||(54511346-54511522)
chr4 (46-179)||(4892621-4892752)
chr4 (73-179)||(54511550-54511654)
chr4 (133-258)||(42077183-42077306)
chr4 (46-179)||(22886417-22886551)
chr4 (46-179)||(22938081-22938215)
chr4 (47-144)||(36825070-36825165)
chr4 (46-130)||(35004472-35004554)
chr4 (69-255)||(40681601-40681777)
chr4 (113-258)||(34932123-34932263)
chr4 (135-179)||(43049336-43049380)
chr4 (68-179)||(4872782-4872891)
[»] chr2 (10 HSPs)
chr2 (46-258)||(36937504-36937709)
chr2 (41-258)||(26407563-26407775)
chr2 (71-258)||(29166866-29167048)
chr2 (46-179)||(29469515-29469648)
chr2 (147-258)||(29469679-29469787)
chr2 (47-179)||(36937740-36937870)
chr2 (46-177)||(26407401-26407530)
chr2 (46-124)||(30786444-30786520)
chr2 (58-179)||(25961093-25961212)
chr2 (46-161)||(18143964-18144080)
[»] chr5 (9 HSPs)
chr5 (46-258)||(36150893-36151100)
chr5 (50-258)||(20730495-20730692)
chr5 (47-176)||(13932800-13932927)
chr5 (47-175)||(36150733-36150860)
chr5 (46-148)||(17990743-17990843)
chr5 (71-152)||(22843767-22843846)
chr5 (120-258)||(8999597-8999733)
chr5 (177-248)||(13932685-13932756)
chr5 (147-184)||(8999762-8999799)
[»] chr8 (19 HSPs)
chr8 (46-258)||(34153372-34153578)
chr8 (46-258)||(42950503-42950710)
chr8 (46-258)||(41480668-41480875)
chr8 (43-176)||(7905630-7905761)
chr8 (46-175)||(23488937-23489064)
chr8 (77-257)||(11732756-11732933)
chr8 (49-258)||(38225594-38225798)
chr8 (46-179)||(5074489-5074620)
chr8 (47-258)||(5074253-5074458)
chr8 (73-175)||(23488827-23488927)
chr8 (135-252)||(42373289-42373403)
chr8 (46-179)||(16997093-16997226)
chr8 (68-194)||(38225454-38225575)
chr8 (69-179)||(11732616-11732724)
chr8 (46-258)||(23488587-23488793)
chr8 (49-179)||(42026946-42027074)
chr8 (50-258)||(42027105-42027308)
chr8 (204-258)||(18385885-18385939)
chr8 (46-179)||(42950341-42950472)
[»] chr6 (13 HSPs)
chr6 (58-258)||(10388230-10388425)
chr6 (46-258)||(67339-67546)
chr6 (58-258)||(30847636-30847831)
chr6 (49-179)||(67577-67705)
chr6 (46-179)||(16434804-16434934)
chr6 (49-179)||(3687627-3687758)
chr6 (58-179)||(3687830-3687950)
chr6 (187-259)||(16434964-16435036)
chr6 (58-148)||(30122812-30122900)
chr6 (69-142)||(6714532-6714603)
chr6 (212-258)||(30122489-30122535)
chr6 (161-228)||(30122746-30122810)
chr6 (67-163)||(35072196-35072290)
[»] chr1 (18 HSPs)
chr1 (56-258)||(34535299-34535496)
chr1 (87-258)||(4066923-4067086)
chr1 (178-259)||(27133979-27134060)
chr1 (46-258)||(49784681-49784892)
chr1 (87-258)||(33321076-33321242)
chr1 (46-152)||(7481186-7481290)
chr1 (77-179)||(27134090-27134190)
chr1 (147-256)||(38208442-38208548)
chr1 (46-179)||(4067117-4067246)
chr1 (58-178)||(27133831-27133949)
chr1 (57-179)||(49784532-49784650)
chr1 (57-191)||(34535518-34535652)
chr1 (49-110)||(38208522-38208583)
chr1 (46-179)||(23329296-23329427)
chr1 (152-252)||(23329464-23329562)
chr1 (58-173)||(38208269-38208381)
chr1 (46-124)||(2464202-2464278)
chr1 (46-179)||(33321273-33321404)
[»] scaffold0024 (2 HSPs)
scaffold0024 (58-179)||(70800-70919)
scaffold0024 (46-222)||(70591-70754)
[»] scaffold0081 (1 HSPs)
scaffold0081 (205-258)||(8603-8656)


Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 28 - 258
Target Start/End: Complemental strand, 32808541 - 32808311
Alignment:
Q  28 taatgacaattgataatggagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggt 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32808541 taatgacaattgataatggagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttggctctattatgataactcaaaatggt 32808442  T
Q  128 ctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacat 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  32808441 ctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacgtatcaaataagatccaaaagacat 32808342  T
Q  228 tatgatattaaccactaaataatatccaaaa 258  Q
    |||| ||||||||||||||||||||||||||    
T  32808341 tatgctattaaccactaaataatatccaaaa 32808311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 46164187 - 46163980
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| ||||||||||| | ||||||||||| |||| | ||||||| |||| |||||||||||  ||||||||||||||||||| |||||||||||||    
T  46164187 gagtaaaccaccaaattggaccctgtctttgtatcaaattctcaaattagtccctgactctatta--ataactcaaaatggtctctgtctttgtcaaacg 46164090  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||||| |||||||||||||||||||||||||    |||||||||||||| ||||| ||||||||||||||||||||||||||||  |||||| |||||    
T  46164089 tttctcatattggtccctgactctattagttgta---ttgcattttaagccattaacgtaccaaataagatccaaaagacattatgccattaactactaa 46163993  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  46163992 ataatatccaaaa 46163980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 33140645 - 33140438
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||||| |||||||||  |||||||||||||||   |||||||| ||  |||||||||||  |||||||||||||||| || ||||||||||||     
T  33140645 gagtaaatcactaaattggtccttgtctttgtaccaaatgctcaaattgatctctgactctatta--ataactcaaaatggtcactgtctttgtcaaaca 33140548  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||||||||||||||| |||||| |||   ||| ||||| |||||||| | |||||||||||||||||||| ||||| |||||||  ||||||   |||    
T  33140547 tttctcagattggtccccgactctttta---gttattttgtattttaagtcattaacataccaaataagatcaaaaaggcattatgtcattaacggttaa 33140451  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  33140450 ataatatccaaaa 33140438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 258
Target Start/End: Original strand, 26244870 - 26245065
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattg 157  Q
    |||||||||  ||||||||||||||| ||| |||||||||| |||||||||||  ||||  ||||||||||||| |||||||||||  ||| ||||||||    
T  26244870 aaattggtcagtgtctttgtaccaaatttttaaattggtccatgactctatta--ataaaacaaaatggtctctgtctttgtcaaatatttatcagattg 26244967  T
Q  158 gtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaa 257  Q
    |||  ||||||||||| |||||   ||| |||||||| |  |||  ||||||||||||||||||| ||||||||  ||||||||||||||||||| ||||    
T  26244968 gtcagtgactctattaattgtt---ttgtattttaagtcactaatgtaccaaataagatccaaaaaacattatgtcattaaccactaaataatattcaaa 26245064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 26121951 - 26122159
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||| | || ||||||| |||||||| ||||||| | |||||||||||| |||||||||||  ||||| ||||||||| ||| ||||||||||| |    
T  26121951 gagtaaattatcacattggtcactgtctttataccaaattctcaaattggtccatgactctatta--ataacacaaaatggtatctgtctttgtcaaatg 26122048  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatcc-aaaagacattatgatattaaccacta 244  Q
    ||||| |||||||||| |||||||||||   ||||||||| |||||||  | ||||  ||||||||||||||| |||| ||| | |   |||||||||||    
T  26122049 tttcttagattggtccatgactctatta---gttgttttgtattttaaatcattaatgtaccaaataagatccaaaaaaacactctctcattaaccacta 26122145  T
Q  245 aataatatccaaaa 258  Q
    ||||||||||||||    
T  26122146 aataatatccaaaa 26122159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 258
Target Start/End: Complemental strand, 3157956 - 3157822
Alignment:
Q  120 aaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatcca 219  Q
    |||||||||||| |||||||||||| ||| |||||||| | | | |||||||||||||||   ||||||| |||||| ||||||||||||||||||||||    
T  3157956 aaaatggtctctgtctttgtcaaacatttttcagattgattc-taactctattagttgtt---ttgcattataagccattaacataccaaataagatcca 3157861  T
Q  220 aaagacattatgatattaaccactaaataatatccaaaa 258  Q
    ||||||||||||  ||||| |||||||||||||||||||    
T  3157860 aaagacattatgtcattaatcactaaataatatccaaaa 3157822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 258
Target Start/End: Complemental strand, 12089360 - 12089151
Alignment:
Q  45 ggagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaac 144  Q
    |||||||||||  ||||| |||  ||| ||||||||||| | | |||||||| |||||||||||||  ||||||| ||| |||| || ||||||||||||    
T  12089360 ggagtaaatcattaaatttgtccatgtttttgtaccaaattcttaaattggttcttgactctatta--ataactctaaa-ggtccctctctttgtcaaac 12089264  T
Q  145 gtttctcagattggtccct-gactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccact 243  Q
     ||| |||||||| ||||  ||||||||||||||||  |||| |||||||| | ||||| || |||||||||| | |||| |||||||| ||||||||||    
T  12089263 atttttcagattgatcccccgactctattagttgtt--tttgtattttaagtcattaacgtatcaaataagattctaaaggcattatgacattaaccact 12089166  T
Q  244 aaataatatccaaaa 258  Q
    |||||||||||||||    
T  12089165 aaataatatccaaaa 12089151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 2051835 - 2051629
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||||| ||||||||||| || |||||| |||| ||| |||||||||| ||||| |||||  |||||||||||| ||| || | ||| ||||||     
T  2051835 gagtaaatcactaaattggtctccgtttttgtatcaaatttttaaattggtccatgactttatta--ataactcaaaatagtccctgtttttatcaaaca 2051738  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||| ||| ||||||  |  |||||||||    |||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||| |||||||||    
T  2051737 ttt-tcatattggtttccaactctatta---attgttttgtattttaagccattaacgtaccaaataagatccaaaagacattatgttatcaaccactaa 2051642  T
Q  246 ataatatccaaaa 258  Q
    ||| |||| ||||    
T  2051641 atattatctaaaa 2051629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 36012782 - 36012651
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||| ||  |||||||||||  |||||||||||||||| || ||||| |||||||    
T  36012782 gagtaaatcactaaattggtctctgtctttgtaccaaattatcaaattgatctctgactctatta--ataactcaaaatggtccctgtctttttcaaacg 36012685  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||||||| |||||| |||||   |||||||||||    
T  36012684 tttctcaaattggttcctgatcttattagttgtt 36012651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 43804256 - 43804125
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||||| ||||||||||| |||||||| |||||| ||| |||||||||||| ||| |||||  |||| |||||||||||  | ||||||||||| |    
T  43804256 gagtaaatcatcaaattggtctttgtctttgcaccaaatttttaaattggtccttaactttatta--ataattcaaaatggtcattgtctttgtcaaatg 43804159  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||||||||||||||| |||| |||||||||||||    
T  43804158 tttctcagattggtctctgaatctattagttgtt 43804125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 41 - 179
Target Start/End: Complemental strand, 45708814 - 45708678
Alignment:
Q  41 taatggagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtc 140  Q
    |||||||||||||||  |||||||||  ||||||||||| ||||||| |||||||||  ||||| | |||  |||||||||||||| |||| ||||||||    
T  45708814 taatggagtaaatcattaaattggtccatgtctttgtactaaaattttaaattggtcactgactatgtta--ataactcaaaatggcctctgtctttgtc 45708717  T
Q  141 aaacgtttctcagattggtccctgactctattagttgtt 179  Q
    ||||||| |||| ||||||| ||||||| ||||||||||    
T  45708716 aaacgttcctcaaattggtctctgactcgattagttgtt 45708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 179
Target Start/End: Original strand, 26244173 - 26244292
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattg 157  Q
    ||||||||  ||||||||||| |||| ||| |||||| ||| |||||||||||  ||||| ||||||||||||| |||||||| || |||||||||||||    
T  26244173 aaattggttactgtctttgtaacaaatttttaaattgatccatgactctatta--ataacacaaaatggtctctgtctttgtccaatgtttctcagattg 26244270  T
Q  158 gtccctgactctattagttgtt 179  Q
    |||| |||||||||||||||||    
T  26244271 gtccttgactctattagttgtt 26244292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 46163817 - 46163949
Alignment:
Q  44 tggagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaa 143  Q
    ||||||||| || ||| |||||| |||||||||||||||| | |||| |||||||  ||||||||||  |||||||||||||||| || |||||||||||    
T  46163817 tggagtaaaccatcaagttggtccctgtctttgtaccaaattctcaatttggtccgcgactctatta--ataactcaaaatggtccctgtctttgtcaaa 46163914  T
Q  144 cgtttctcagattggtccctgactctattagttgtt 179  Q
     ||||||||||||| | ||||||||||||| |||||    
T  46163915 tgtttctcagattgat-cctgactctattaattgtt 46163949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 253
Target Start/End: Original strand, 43031152 - 43031324
Alignment:
Q  72 ctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctat 171  Q
    ||||||| |||| ||| |||||||||   ||||||||||  |||||| |||||||||| | |    ||||||| ||| |||||||||||| |||||||||    
T  43031152 ctttgtatcaaatttttaaattggtcacggactctatta--ataacttaaaatggtctttgt----gtcaaacatttatcagattggtccttgactctat 43031245  T
Q  172 tagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatc 253  Q
    ||||||   |||||||||||||| | ||||  || ||||||| || |||||||||||||| |||||||||||||||||||||    
T  43031246 tagttg---ttttgcattttaagtcattaaagtatcaaataaaattcaaaagacattatgctattaaccactaaataatatc 43031324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 258
Target Start/End: Complemental strand, 55214269 - 55214127
Alignment:
Q  113 ataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaata 212  Q
    ||||||||||||| | | |||||||||||||| ||| | | |||||||    |||||||||||||||   ||| |||| |||   |||||||||||||||    
T  55214269 ataactcaaaatgatttatatctttgtcaaacattttttaaattggtcttcaactctattagttgtt---ttgtatttgaagtgattaacataccaaata 55214173  T
Q  213 agatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||    
T  55214172 agattcaaaagacattatgttattaaccactaaataatatccaaaa 55214127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 55213976 - 55214092
Alignment:
Q  57 caaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagatt 156  Q
    |||||| |||||||||||||||||||| ||||||||||||   ||| |||||||  ||||||||||||||||    |||||||||||||||||||| |||    
T  55213976 caaattagtctctgtctttgtaccaaattttcaaattggtatctgaatctatta--ataactcaaaatggtcaaggtctttgtcaaacgtttctcaaatt 55214073  T
Q  157 ggtccctgactctattagt 175  Q
    |||| | ||||||||||||    
T  55214074 ggtctccgactctattagt 55214092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 45708442 - 45708647
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctc-tatctttgtcaaac 144  Q
    |||||||||||||||||||||  | ||   |||||||| ||| |||||||||  | |||||||||  |||||||||||  |  || | ||||||||||||    
T  45708442 gagtaaatcaccaaattggtccttatc---gtaccaaatttttaaattggtctctaactctatta--ataactcaaaaatgattcatgtctttgtcaaac 45708536  T
Q  145 gtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccacta 244  Q
    |||||||||||||||| | | ||||||||||| ||   ||| |||||||| | | ||| ||||||||||||||||||| | ||||||  |||||| ||||    
T  45708537 gtttctcagattggtctccgtctctattagttctt---ttgtattttaagtcatcaacgtaccaaataagatccaaaaaaaattatgtcattaacgacta 45708633  T
Q  245 aataatatccaaaa 258  Q
    ||||||||| ||||    
T  45708634 aataatatctaaaa 45708647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 32808182 - 32808280
Alignment:
Q  80 caaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctga-ctctattagttgt 178  Q
    |||| |||||||||||||| |||||||||||  ||||||||||||| ||||| ||||||||||| |||||||| ||||||| |||| |||||||||||||    
T  32808182 caaattttcaaattggtccctgactctatta--ataactcaaaatgatctctgtctttgtcaaatgtttctcaaattggtctctgacctctattagttgt 32808279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 2051508 - 2051598
Alignment:
Q  87 tcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgtt 179  Q
    |||||||||||  ||||||| |||  ||||||||||||||||  |||||||||||||||||||||| |||||||  ||  |||||||||||||    
T  2051508 tcaaattggtctctgactctgtta--ataactcaaaatggtccttatctttgtcaaacgtttctcatattggtcattgtttctattagttgtt 2051598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 12088989 - 12089120
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||||  |||||||||| ||| ||||||||||| ||| |||||||||| ||||| |||||  |||| ||||||||||   | | ||| |||||      
T  12088989 gagtaaatcattaaattggtctatgtttttgtaccaaatttttaaattggtccctgactttatta--ataattcaaaatggttcatgtatttatcaaaat 12089086  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||| | ||||| ||||| ||||||||||||||||    
T  12089087 ttttttagattagtccccgactctattagttgtt 12089120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 12015121 - 12015031
Alignment:
Q  69 tgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtcc 161  Q
    ||||||||||||||| | |||| ||| |||   |||||||||  |||||||||||| |||||||| |||||| ||| ||||||| ||||||||    
T  12015121 tgtctttgtaccaaattctcaatttgatccccaactctatta--ataactcaaaatagtctctatttttgtctaacatttctcaaattggtcc 12015031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 7565632 - 7565692
Alignment:
Q  87 tcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttct 150  Q
    ||||||||||||  ||||||||||  ||||||||||||| | ||||||||||||||||||||||    
T  7565632 tcaaattggtccc-gactctatta--ataactcaaaatgatatctatctttgtcaaacgtttct 7565692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 36012575 - 36012620
Alignment:
Q  213 agatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    ||||||||||||||||||| ||||||  |||||||||||| |||||    
T  36012575 agatccaaaagacattatgctattaatgactaaataatattcaaaa 36012620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 7e-55; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 57 - 258
Target Start/End: Complemental strand, 35316200 - 35316004
Alignment:
Q  57 caaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagatt 156  Q
    |||||| |||||||||||||||||||| | | |||||||||| |||||||||||  |||||||||||||||| || ||||| ||||||||||||||||||    
T  35316200 caaattagtctctgtctttgtaccaaattcttaaattggtccctgactctatta--ataactcaaaatggtccctgtctttctcaaacgtttctcagatt 35316103  T
Q  157 ggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaa 256  Q
    ||||||| |||||||||||   |||||||||||||||| | ||||| || ||||||||||||||||| |||||||  ||||||||||||| |||||||||    
T  35316102 ggtccctaactctattagt---tgttttgcattttaagtcattaacgtatcaaataagatccaaaaggcattatgtcattaaccactaaaaaatatccaa 35316006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 26073143 - 26073350
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| ||||||||||||   ||||||||||||||| ||||||||||  |  | |||||||||  |||||||||||||||| || |||||||||||||    
T  26073143 gagtaaaccaccaaattggttcatgtctttgtaccaaattttcaaattgacctctaactctatta--ataactcaaaatggtcactttctttgtcaaacg 26073240  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||||||||||||||||| ||||||||   |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||   || ||||| |||    
T  26073241 tttctcagattggtccctgcctctatta---gttgttttgcattttaagccattaacgtaccaaataagatccaaaaggcattattccataaaccagtaa 26073337  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  26073338 ataatatccaaaa 26073350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 33189882 - 33190088
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||| |||||||||||||||||||||  | ||||||||||| ||||||||||||  ||||||||||||||| | | ||||| ||||| |    
T  33189882 gagtaaaccatcaaactggtctctgtctttgtaccaacttctcaaattggtctttgactctatta--ataactcaaaatggtatttgtctttatcaaaag 33189979  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||| ||||| ||||||||||||| |||||   ||||||  ||||||||||||    
T  33189980 tttctcagattggtccctgactctatta---gttgttttgcattttaagcctttaacgtaccaaataagat-caaaatgtattatgccattaaccactaa 33190075  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  33190076 ataatatccaaaa 33190088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 26096930 - 26097137
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| ||||||||||||   ||||||||||||||| ||||||||||  |  | |||||||||  |||||||||||||||| || |||||||||||||    
T  26096930 gagtaaaccaccaaattggttcatgtctttgtaccaaattttcaaattgacctctaactctatta--ataactcaaaatggtcactttctttgtcaaacg 26097027  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||||| ||||||||||| ||||||||   |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||   || ||||| |||    
T  26097028 tttctcaaattggtccctgcctctatta---gttgttttgcattttaagccattaacgtaccaaataagatccaaaaggcattattccataaaccagtaa 26097124  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  26097125 ataatatccaaaa 26097137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 36642607 - 36642814
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||||||||||| |||||||||||  ||||||||| ||  ||||| ||||||||||| |    
T  36642607 gagtaaatcattaaattggtctctatctttgtaccaaattttcaaattggtccctgactctatta--ataactcaacatcatctctgtctttgtcaaaag 36642704  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    | | | |||||||||| ||| | |||||   |||||||||||||| ||||| || ||||||||||||| ||| |||| |||||||   ||||||||||||    
T  36642705 tgttttagattggtccgtgaatgtatta---gttgttttgcatttaaagccattgacataccaaataaaatctaaaatacattatatcattaaccactaa 36642801  T
Q  246 ataatatccaaaa 258  Q
    ||||||| |||||    
T  36642802 ataatattcaaaa 36642814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 46 - 240
Target Start/End: Original strand, 32047233 - 32047422
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||||||||||||||| || ||||||||||||| | |||||||||||  |||||||||||  ||||||||||||||||||| ||||||||||||     
T  32047233 gagtaaatcaccaaattggtccctatctttgtaccaaattctcaaattggtctctgactctatta--ataactcaaaatggtctctgtctttgtcaaact 32047330  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaacc 240  Q
    ||||||| |||  ||||  |||||||||   ||||||||| |||||||||| ||||  ||||||| ||| |||||||| |||||||  |||||||    
T  32047331 tttctcatattattccccaactctatta---gttgttttgtattttaagccattaaggtaccaaaaaagttccaaaaggcattatgccattaacc 32047422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 253
Target Start/End: Original strand, 25658388 - 25658589
Alignment:
Q  47 agtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgt 146  Q
    |||||||||  ||||| ||| || ||||||||||||| | |||||||||||| ||||||| |||  ||||||||||||||||  | | ||||||||||||    
T  25658388 agtaaatcagtaaattagtccctatctttgtaccaaattctcaaattggtccctgactctgtta--ataactcaaaatggtcattgtttttgtcaaacgt 25658485  T
Q  147 ttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaa 246  Q
    || |||||||| |||  |||| |||||||||||   ||| ||||||||||  |||  ||||||||||||||||||| ||||||||  |||| ||||||||    
T  25658486 ttatcagattgctcctcgactttattagttgtt---ttgtattttaagccactaaagtaccaaataagatccaaaacacattatgcaattatccactaaa 25658582  T
Q  247 taatatc 253  Q
    |||||||    
T  25658583 taatatc 25658589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 26073512 - 26073381
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||||||||| |||||||||||||||| |||||| ||||||| |||||||||||  |||| |||||||||||||| ||||||||||| |    
T  26073512 gagtaaaccatcaaattggtcactgtctttgtaccaaattttcaatttggtccctgactctatta--ataattcaaaatggtctctgtctttgtcaaatg 26073415  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||||| ||||||||| ||| || ||||| |||||    
T  26073414 tttcttagattggtctctgcctttattaattgtt 26073381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 26097299 - 26097168
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||||||||| |||||||||||||||| |||||| ||||||| |||||||||||  |||| |||||||||||||| ||||||||||| |    
T  26097299 gagtaaaccatcaaattggtcactgtctttgtaccaaattttcaatttggtccctgactctatta--ataattcaaaatggtctctgtctttgtcaaatg 26097202  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||||| ||||||||| ||| || ||||| |||||    
T  26097201 tttcttagattggtctctgcctttattaattgtt 26097168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 35315842 - 35315973
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| |||||||||  |||||| |||||||||||| | |||| | ||||| |||||||||||  |||||||||||| |||| | ||||||||||| |    
T  35315842 gagtaaaccaccaaattaatctctgcctttgtaccaaattgtcaattcggtccctgactctatta--ataactcaaaatagtctatgtctttgtcaaatg 35315939  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    |||||||||||| |||||||||||||||||||||    
T  35315940 tttctcagattgctccctgactctattagttgtt 35315973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 47427 - 47295
Alignment:
Q  45 ggagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaac 144  Q
    ||||||||| |  |||||||||||| ||||||||||||| | | ||||||||| ||| ||||||||  ||||||||||||| ||||| |||||||| |||    
T  47427 ggagtaaattattaaattggtctctatctttgtaccaaattattaaattggtctttgtctctatta--ataactcaaaatgatctctgtctttgtcgaac 47330  T
Q  145 gtttctcagattggtccctgactctattagttgtt 179  Q
     ||| |||||||||||||||| |||||||||||||    
T  47329 atttttcagattggtccctgattctattagttgtt 47295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 33190237 - 33190119
Alignment:
Q  59 aattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattgg 158  Q
    ||||||| | ||||||| || |||| |||||| ||| ||| |||||||||||  |||| |||||||||||||| ||||||| ||| ||||||||||||||    
T  33190237 aattggtttatgtctttatatcaaattttcaatttgatccctgactctatta--ataattcaaaatggtctctgtctttgttaaatgtttctcagattgg 33190140  T
Q  159 tccctgactctattagttgtt 179  Q
    || ||||||||||||||||||    
T  33190139 tctctgactctattagttgtt 33190119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 47122 - 47264
Alignment:
Q  113 ataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaata 212  Q
    |||| |||||||||| ||| | | |||||||||||||||| |||||||    ||||||||||||||| | |   |||||||| | ||||| || ||||||    
T  47122 ataattcaaaatggtttctgtttctgtcaaacgtttctcaaattggtcatcaactctattagttgttttat---attttaagtcattaacgtatcaaata 47218  T
Q  213 agatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    |||| ||||| |||||||   ||||||||||||||||||| |||||    
T  47219 agattcaaaatacattatatcattaaccactaaataatattcaaaa 47264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 527694 - 527580
Alignment:
Q  139 tcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaa 238  Q
    |||||||||||||||||||||| |||||||| | |    |||||||||||||| |||| ||| | || || ||||||| |||||||| |||||  |||||    
T  527694 tcaaacgtttctcagattggtctctgactctttaa----ttgttttgcatttttagccattagcgta-cagataagattcaaaagacgttatgtcattaa 527600  T
Q  239 ccactaaataatatccaaaa 258  Q
    ||||||||||||||| ||||    
T  527599 ccactaaataatatctaaaa 527580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 32056626 - 32056740
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| ||| |||| ||||  ||||||||||||||| |||||| ||||||| | |||||||||  |||||| |||||||||| | ||||||||||||     
T  32056626 gagtaaaccactaaatcggtcaatgtctttgtaccaaattttcaatttggtccct-actctatta--ataacttaaaatggtctttgtctttgtcaaaca 32056722  T
Q  146 tttctcagattggtccct 163  Q
    |||||||| | |||||||    
T  32056723 tttctcagttaggtccct 32056740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 7511079 - 7511198
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||||||||| || ||||||||||||| | |||||||||||  ||||||| |||  |||||||||||||            ||||||||    
T  7511079 gagtaaaccatcaaattggtccctatctttgtaccaaattctcaaattggtcaatgactctgtta--ataactcaaaatg------------gtcaaacg 7511164  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    |||||||||||||||||| ||||||||| |||||    
T  7511165 tttctcagattggtccctaactctattaattgtt 7511198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 153
Target Start/End: Original strand, 24556176 - 24556215
Alignment:
Q  114 taactcaaaatggtctctatctttgtcaaacgtttctcag 153  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  24556176 taactcaaaatggtctatatctttgtcaaacgcttctcag 24556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 5964272 - 5964232
Alignment:
Q  113 ataactcaaaatggtctctatctttgtcaaacgtttctcag 153  Q
    |||||||||||||||| || ||||| |||||||||||||||    
T  5964272 ataactcaaaatggtcactgtctttatcaaacgtttctcag 5964232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 21297713 - 21297794
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtct 129  Q
    ||||||| || |||||||||| |||||||||||||||| | | || || |||  |||||||||||  |||||||||||| ||||    
T  21297713 gagtaaaccatcaaattggtccctgtctttgtaccaaattcttaatttagtctctgactctatta--ataactcaaaatagtct 21297794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 4892385 - 4892590
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| |||||||||||||||||||||||||||||| | | ||||| |||   ||||||||||  |||||||||||||||  || ||||||||||||     
T  4892385 gagtaaaccaccaaattggtctctgtctttgtaccaaattcttaaattagtctccgactctatta--ataactcaaaatggttactgtctttgtcaaaca 4892482  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||| ||||||||||||||||||||||   ||||||||||||||||||||  |||| ||||||||||||||||||| ||||  ||  ||||| ||||||    
T  4892483 tttcttagattggtccctgactctatta---gttgttttgcattttaagccactaacgtaccaaataagatccaaaaaacat--tgccattaaacactaa 4892577  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  4892578 ataatatccaaaa 4892590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 22886789 - 22886582
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||||||| ||||||| | | |||||||| |||| ||| ||||||||| ||||||||||||  |||| ||||||| || |||||||||||||||||    
T  22886789 gagtaaatcaccgaattggtatttatctttgtatcaaatttttaaattggtctttgactctatta--ataattcaaaatagtttctatctttgtcaaacg 22886692  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||| | |||||||||   |||||||||| |||||   ||| |||||||| | ||||| || |||||||||||||||| |||||||   ||||||||||||    
T  22886691 ttttttagattggtcttcgactctattacttgtt---ttgtattttaagtcattaacgtaacaaataagatccaaaacacattatatcattaaccactaa 22886595  T
Q  246 ataatatccaaaa 258  Q
    ||||||| |||||    
T  22886594 ataatattcaaaa 22886582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 22938453 - 22938246
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||||||| ||||||| | | |||||||| |||| ||| ||||||||| ||||||||||||  |||| ||||||| || |||||||||||||||||    
T  22938453 gagtaaatcaccgaattggtatttatctttgtatcaaatttttaaattggtctttgactctatta--ataattcaaaatagtttctatctttgtcaaacg 22938356  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||| | |||||||||   |||||||||| |||||   ||| |||||||| | ||||| || |||||||||||||||| |||||||   ||||||||||||    
T  22938355 ttttttagattggtcttcgactctattacttgtt---ttgtattttaagtcattaacgtaacaaataagatccaaaacacattatatcattaaccactaa 22938259  T
Q  246 ataatatccaaaa 258  Q
    ||||||| |||||    
T  22938258 ataatattcaaaa 22938246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 4872546 - 4872751
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| ||||||| || ||| ||||||||||||||| | | |||||| ||  | |||||||||  ||||||||||||| ||||| |||||||||||||    
T  4872546 gagtaaaccaccaaactgatctttgtctttgtaccaaattcttaaattgatctctaactctatta--ataactcaaaatgatctctgtctttgtcaaacg 4872643  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||| |||||| |||||||||||||||   |||||||||||| ||||| | ||||| ||| ||||||||| ||||||||||| ||  |||| |||||||    
T  4872644 tttct-agattgatccctgactctatta---gttgttttgcatattaagtcattaacgtactaaataagattcaaaagacatt-tgccattagccactaa 4872738  T
Q  246 ataatatccaaaa 258  Q
    ||||||| |||||    
T  4872739 ataatatacaaaa 4872751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 258
Target Start/End: Complemental strand, 45302627 - 45302485
Alignment:
Q  113 ataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaata 212  Q
    |||| |||||||||| ||| |||||||||||| ||| ||| ||||||||||||||||||||||||||   |||||||||||| | |||||||| ||||||    
T  45302627 ataattcaaaatggtttctgtctttgtcaaacatttttcatattggtccctgactctattagttgtt---ttgcattttaagtcattaacatatcaaata 45302531  T
Q  213 agatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    |||| |||||  |||||||| |||||||||| ||||||||||||||    
T  45302530 agattcaaaatgcattatgacattaaccactgaataatatccaaaa 45302485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 51103364 - 51103571
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||  |||| |||||||||||  |  |||||||||| |    
T  51103364 gagtaaatcactaaattggtctctgtctttgtaccaaattctcaaattggtccctgactctatta--ataattcaaaatggtcattgcctttgtcaaaag 51103461  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    |||||| ||||||||    |||||||||   ||| ||||| |||||||| | ||| | |||||||||||| ||||||| ||||||    | |||||||||    
T  51103462 tttctcggattggtcttcaactctatta---gttcttttgtattttaagtcattagcgtaccaaataagacccaaaaggcattatatcctcaaccactaa 51103558  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  51103559 ataatatccaaaa 51103571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 35251754 - 35251623
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| ||||||||||||| |||||||||||||||| | |||| ||||||| | |||||||||  |||||| | |||||||| | ||||| ||||| |    
T  35251754 gagtaaaccaccaaattggtccctgtctttgtaccaaattctcaatttggtccctaactctatta--ataacttataatggtctttgtctttctcaaatg 35251657  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||||||||||||||| ||||||||||||||||||    
T  35251656 tttctcagattggtctctgactctattagttgtt 35251623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 39864090 - 39864217
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||||  |||||||||||||||||||||||||| ||| ||||||||||  ||||||||||  ||||||||||||| || || ||||||||||||     
T  39864090 gagtaaatcattaaattggtctctgtctttgtaccaaatttttaaattggtccccgactctatta--ataactcaaaatgatccctgtctttgtcaaact 39864187  T
Q  146 tttctcagattggtccctgactctattagt 175  Q
    ||||||| ||||||| ||| ||||||||||    
T  39864188 tttctcatattggtctctgtctctattagt 39864217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 35251450 - 35251592
Alignment:
Q  113 ataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaata 212  Q
    ||||||||||||||| | | |||||||||||  ||| | |||||| || ||||| ||||||||| ||   |||||||||||| | |||| ||||||||||    
T  35251450 ataactcaaaatggtttatgtctttgtcaaatattttttagattgatctctgacgctattagttatt---ttgcattttaagtcattaagataccaaata 35251546  T
Q  213 agatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||    
T  35251547 agatccaaaagacattacgtcattaaccactaaataatatccaaaa 35251592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 51103733 - 51103602
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||||||||| || ||||||||||||| |||||||||||||  |||||||||||  |||||||||||| |||||| ||||| ||||||     
T  51103733 gagtaaaccatcaaattggtccctatctttgtaccaaattttcaaattggtcactgactctatta--ataactcaaaatagtctctgtctttatcaaaca 51103636  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||||||| |||||| | ||| |||||||||||||    
T  51103635 tttctcaaattggttcatgattctattagttgtt 51103602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 258
Target Start/End: Original strand, 43049141 - 43049305
Alignment:
Q  89 aaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcat 188  Q
    |||||||||  ||| |||||||  |||||||||||||||| ||||||||||||| | ||| ||| |||||| || |||||||||| |||||   ||| ||    
T  43049141 aaattggtcggtgagtctatta--ataactcaaaatggtccctatctttgtcaagcttttttcaaattggtgcccgactctattaattgtt---ttgtat 43049235  T
Q  189 tttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    |||||| | ||||  || ||||||||||| ||||| |||||||  |||||||||||||||||||||||||    
T  43049236 tttaagtcattaatgtatcaaataagatctaaaaggcattatgtcattaaccactaaataatatccaaaa 43049305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 258
Target Start/End: Original strand, 54511346 - 54511522
Alignment:
Q  77 taccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagtt 176  Q
    ||||||| ||| |||||| ||  ||| |||||||  |||||||||||| |||| ||||||||||||  |||| | ||||||||| | ||||||||||       
T  54511346 taccaaatttttaaattgatctatgaatctatta--ataactcaaaatagtctttatctttgtcaattgttttttagattggtctccgactctatta--- 54511440  T
Q  177 gttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    ||| ||||| |||||||  | ||||| || || ||||||||||||||| |||||   |||||| ||||||||||||||||||    
T  54511441 gttcttttgtattttaaatcattaacgtatcagataagatccaaaagatattatatcattaacgactaaataatatccaaaa 54511522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 4892752 - 4892621
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||||| || ||| ||||||||||||| | |||| |||||||  |||||||||   | || |||||||||||| | ||||||| ||| |    
T  4892752 gagtaaaccatcaaatttgtttctatctttgtaccaaattctcaatttggtcccagactctattt--acaattcaaaatggtctttgtctttgtgaaatg 4892655  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||||||||||||||||  ||||||||||||||||    
T  4892654 tttctcagattggtccacgactctattagttgtt 4892621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 179
Target Start/End: Complemental strand, 54511654 - 54511550
Alignment:
Q  73 tttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctatt 172  Q
    ||||||||||| | | ||||||||||  || |||||||  |||| |||||||||||| |||||| ||||||||||| | | |||||||||||||||||||    
T  54511654 tttgtaccaaattcttaaattggtccacgaatctatta--ataattcaaaatggtctatatcttagtcaaacgttttttaaattggtccctgactctatt 54511557  T
Q  173 agttgtt 179  Q
    || ||||    
T  54511556 agctgtt 54511550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 42077306 - 42077183
Alignment:
Q  133 tctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcatttt-aagcccttaacataccaaataagatccaaaagacattatg 231  Q
    |||||||||||||||| |||||||||||   ||||||||||||||||   ||| ||||| ||| | ||||  ||| |||||||||| ||||  |||||||    
T  42077306 tctttgtcaaacgtttttcagattggtcatcgactctattagttgtt---ttgtattttgaagtcattaatgtactaaataagatcgaaaatgcattatg 42077210  T
Q  232 atattaaccactaaataatatccaaaa 258  Q
     |||||| ||||||||||||| |||||    
T  42077209 ctattaatcactaaataatattcaaaa 42077183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 22886417 - 22886551
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctatta-tgataactcaaaatggtctctatctttgtcaaac 144  Q
    |||||||||| |||||||||   ||| ||||||||||| | | |||||||| | ||||| ||||| | |||||||||||| ||   | |||||||||||     
T  22886417 gagtaaatcatcaaattggttcatgtatttgtaccaaattcttaaattggttcctgactttattaataataactcaaaatagtacttgtctttgtcaaat 22886516  T
Q  145 gtttctcagattggtccctgactctattagttgtt 179  Q
    |||||||||||| ||| || | |||||||||||||    
T  22886517 gtttctcagattagtctctaattctattagttgtt 22886551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 22938081 - 22938215
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctatta-tgataactcaaaatggtctctatctttgtcaaac 144  Q
    |||||||||| |||||||||   ||| ||||||||||| | | |||||||| | ||||| ||||| | |||||||||||| ||   | |||||||||||     
T  22938081 gagtaaatcatcaaattggttcatgtatttgtaccaaattcttaaattggttcctgactttattaataataactcaaaatagtacttgtctttgtcaaat 22938180  T
Q  145 gtttctcagattggtccctgactctattagttgtt 179  Q
    |||||||||||| ||| || | |||||||||||||    
T  22938181 gtttctcagattagtctctaattctattagttgtt 22938215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 36825165 - 36825070
Alignment:
Q  47 agtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaac 144  Q
    |||||| || ||||||||| | ||| ||||||||||| |||| | |||||| ||||||||||||  ||||||||||||| ||| ||||||| ||||||    
T  36825165 agtaaaccatcaaattggtatttgtatttgtaccaaattttctatttggtcattgactctatta--ataactcaaaatgatctatatctttatcaaac 36825070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 35004472 - 35004554
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctc 130  Q
    |||||||||||||| ||  || |||||||||||||||| | ||| |||||||| |||||||||||  |||||||||||| |||||    
T  35004472 gagtaaatcaccaatttaatccctgtctttgtaccaaattctcatattggtccctgactctatta--ataactcaaaatagtctc 35004554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 255
Target Start/End: Complemental strand, 40681777 - 40681601
Alignment:
Q  69 tgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactc 168  Q
    |||||||||||| || | |||||||||||| ||| |||||||  |||||| |||||||||     ||||||| ||||||| | | ||||||||| ||||     
T  40681777 tgtctttgtaccgaattctcaaattggtccctgattctatta--ataacttaaaatggtc-----ctttgtcgaacgttttttaaattggtccccgactg 40681685  T
Q  169 tattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatcca 255  Q
    |||||||| ||   ||| |||||||| | ||||  || ||| |||||| ||||||||||||||  | | |||| |||||||||||||    
T  40681684 tattagttatt---ttgtattttaagtcattaatgtatcaattaagattcaaaagacattatgtcactgaccattaaataatatcca 40681601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 34932123 - 34932263
Alignment:
Q  113 ataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaata 212  Q
    ||||||||||||||| | |  |||||||||| |||| ||| ||||||| |  |||||||||||| ||   ||| |||||||  | ||||  || ||||||    
T  34932123 ataactcaaaatggtgtgt--ctttgtcaaatgtttatcatattggtctcaaactctattagttctt---ttgtattttaactcattaatgtatcaaata 34932217  T
Q  213 agatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    ||||||||||| ||||||   ||||||||||||||||||| |||||    
T  34932218 agatccaaaaggcattatatcattaaccactaaataatattcaaaa 34932263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 43049380 - 43049336
Alignment:
Q  135 tttgtcaaacgtttctcagattggtccctgactctattagttgtt 179  Q
    ||||||||||||||||||||||| || ||||||||||||||||||    
T  43049380 tttgtcaaacgtttctcagattgatctctgactctattagttgtt 43049336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 4872891 - 4872782
Alignment:
Q  68 ctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgact 167  Q
    |||||||||||||||| | | || ||| |  ||| ||||||||  |||||| |||||| ||||| ||||| | ||  |||||||| ||||||| ||||||    
T  4872891 ctgtctttgtaccaaattctaaatttgatttttgcctctatta--ataacttaaaatgatctctgtctttatgaagtgtttctcatattggtctctgact 4872794  T
Q  168 ctattagttgtt 179  Q
    ||||||||||||    
T  4872793 ctattagttgtt 4872782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 36937504 - 36937709
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| ||||||||| ||| || ||||||||||||| | |||||||||||  |||||||||||  |||||||||  |||||| | ||||||||||||     
T  36937504 gagtaaaccaccaaattagtccctatctttgtaccaaattctcaaattggtctctgactctatta--ataactcaa--tggtctttgtctttgtcaaaca 36937599  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||| |||||||| | |||||||||||||||   |||||||||||||||| | ||| |||||||||||||||||||| |||||||  ||||||||||||    
T  36937600 tttcttagattggtacttgactctattagttg---ttttgcattttaagccatcaacgtaccaaataagatccaaaaggcattatgtcattaaccactaa 36937696  T
Q  246 ataatatccaaaa 258  Q
    |||||||| ||||    
T  36937697 ataatatctaaaa 36937709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 258
Target Start/End: Complemental strand, 26407775 - 26407563
Alignment:
Q  41 taatggagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtc 140  Q
    |||| |||||||||| ||| || ||| |||||||||||||||| ||||| |||||||| |||||||||||  |||| ||||||||||| || ||||||||    
T  26407775 taattgagtaaatcatcaatttagtccctgtctttgtaccaaattttcatattggtccctgactctatta--ataattcaaaatggtccctgtctttgtc 26407678  T
Q  141 aaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaacc 240  Q
    || | ||| |||  ||| ||| |||||||||||   ||||||||| ||||||||   ||||| ||||||||||||||| |||| |||||    |||||||    
T  26407677 aatcatttttcatgttgatccttgactctatta---gttgttttgtattttaagttattaacgtaccaaataagatccgaaaggcattagaccattaacc 26407581  T
Q  241 actaaataatatccaaaa 258  Q
    |||||||||||| |||||    
T  26407580 actaaataatattcaaaa 26407563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 258
Target Start/End: Complemental strand, 29167048 - 29166866
Alignment:
Q  71 tctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactcta 170  Q
    |||||||| |||| ||||||||| || |  |||||||||  |||||||||||||||||||| | ||||||||||||||||||||||| ||||| ||| ||    
T  29167048 tctttgtaacaaattttcaaattagtaccggactctatt--gataactcaaaatggtctctgtttttgtcaaacgtttctcagattgatccctaactata 29166951  T
Q  171 ttagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    |||   |  ||||| ||||||||| | ||||| ||| |||||||||||||||| ||||||   ||||||||||||||||||| |||||    
T  29166950 tta---gccgttttacattttaagtcattaacgtactaaataagatccaaaaggcattataccattaaccactaaataatattcaaaa 29166866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 29469515 - 29469648
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||| | ||||||||||||| |||||||||||| | ||||||||||| ||||||||||||  |||||||||||||||| || ||||||||||| |    
T  29469515 gagtaaatctcgaaattggtctctgcctttgtaccaaattctcaaattggtcattgactctatta--ataactcaaaatggtcgctgtctttgtcaaatg 29469612  T
Q  146 tttctcagattggt--ccctgactctattagttgtt 179  Q
    ||||||||||| ||  |||||||||||||| |||||    
T  29469613 tttctcagattagtccccctgactctattaattgtt 29469648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 29469787 - 29469679
Alignment:
Q  147 ttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaa 246  Q
    |||||||||||||||||||||||||||||||||   ||| |||||||| | ||||| || ||||||||||| |||||||||||||  |||||||||||||    
T  29469787 ttctcagattggtccctgactctattagttgtt---ttgtattttaagtcattaacgtatcaaataagatcgaaaagacattatgtcattaaccactaaa 29469691  T
Q  247 taatatccaaaa 258  Q
    ||||||||||||    
T  29469690 taatatccaaaa 29469679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 36937870 - 36937740
Alignment:
Q  47 agtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgt 146  Q
    |||||| || |||||||||   ||||||||||||||| | |||| |||||||||||||||||||  |||||| |||||||||||| ||||||| ||| ||    
T  36937870 agtaaaccatcaaattggttcttgtctttgtaccaaattctcaatttggtccttgactctatta--ataactgaaaatggtctctgtctttgtgaaatgt 36937773  T
Q  147 ttctcagattggtccctgactctattagttgtt 179  Q
    |||||| |||| |||||||||||||||||||||    
T  36937772 ttctcaaattgatccctgactctattagttgtt 36937740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 26407401 - 26407530
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||| |||| || ||||||  ||||||||||||||| ||||||||||||    ||||||||||  |||||||||||||||| || ||||||||||||     
T  26407401 gagtaagtcacgaatttggtccatgtctttgtaccaaattttcaaattggtttcagactctatta--ataactcaaaatggtccctgtctttgtcaaact 26407498  T
Q  146 tttctcagattggtccctgactctattagttg 177  Q
    |||||||||||||||| || ||||||||||||    
T  26407499 tttctcagattggtccatgtctctattagttg 26407530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 30786520 - 30786444
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaat 124  Q
    ||||||| || ||||||| ||| ||||||||||||||| |||||||||| ||| |||||||||||  ||||||||||||    
T  30786520 gagtaaaccatcaaattgatctttgtctttgtaccaaactttcaaattgatccctgactctatta--ataactcaaaat 30786444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 179
Target Start/End: Original strand, 25961093 - 25961212
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattg 157  Q
    ||||||||| ||| |||||||  ||||| | |||||  ||| |||||||||||  |||||| ||||||||| || | ||| |||||||||||||| |||     
T  25961093 aaattggtccctgactttgtattaaaatcttaaatttatccatgactctatta--ataacttaaaatggtccctgtttttatcaaacgtttctcatatta 25961190  T
Q  158 gtccctgactctattagttgtt 179  Q
    |||  ||||||||||| |||||    
T  25961191 gtctttgactctattaattgtt 25961212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 18144080 - 18143964
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtacca---aaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaa 142  Q
    ||||||| || |||||| |||| ||||||| |||||   || ||| |||||||||  |||||||||||  |||||||||||||||   | | ||||||||    
T  18144080 gagtaaaccatcaaattagtctttgtctttttaccaccaaatttttaaattggtctctgactctatta--ataactcaaaatggttcatgtttttgtcaa 18143983  T
Q  143 acgtttctcagattggtcc 161  Q
    |||||| ||||||||||||    
T  18143982 acgtttatcagattggtcc 18143964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 9e-45; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 36151100 - 36150893
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||||||||| |||||||  ||| ||||||||||| | |||||||||| | | ||||||| |  ||||||||||||||||||| |||||||||||||    
T  36151100 gagtaaatcaccatattggtccttgtatttgtaccaaattctcaaattggttcctaactctatga--ataactcaaaatggtctctgtctttgtcaaacg 36151003  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||||| |||| |||| |||||| |||   ||||||||| |||||||| | ||||  |||||||||||||||||||  |||||||  ||||||||||||    
T  36151002 tttctcaaattgatccccgactctctta---gttgttttgtattttaagtcattaatgtaccaaataagatccaaaaagcattatgccattaaccactaa 36150906  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  36150905 ataatatccaaaa 36150893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 20730692 - 20730495
Alignment:
Q  50 aaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttc 149  Q
    |||||| ||| |||||| |||||||| |||||||   | |||||||||| |||||||||||  |||||| ||||||||||      |||||||||||||     
T  20730692 aaatcatcaatttggtccctgtctttataccaaatacttaaattggtccatgactctatta--ataacttaaaatggtct------ttgtcaaacgtttt 20730601  T
Q  150 tcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataa 249  Q
    | ||||||||| |  |||||||||||||||   ||| |||||||||| ||||| ||  |||||||||||| ||  |||||||  ||||||||||||||||    
T  20730600 ttagattggtctcatactctattagttgtt---ttgtattttaagccattaacgtattaaataagatccataatgcattatgtcattaaccactaaataa 20730504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 13932927 - 13932800
Alignment:
Q  47 agtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgt 146  Q
    |||||| || |||||||||| || | ||||||| ||| | |||||||| | || ||||||||||  ||||||||||||||||  | ||||||||||||||    
T  13932927 agtaaaccatcaaattggtccctatttttgtactaaattctcaaattgattctcgactctatta--ataactcaaaatggtcaatgtctttgtcaaacgt 13932830  T
Q  147 ttctcagattggtccctgactctattagtt 176  Q
    ||||||||||| |||  |||||||||||||    
T  13932829 ttctcagattgatccacgactctattagtt 13932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 36150733 - 36150860
Alignment:
Q  47 agtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatc-tttgtcaaacg 145  Q
    |||||||||||||||||||| || ||| ||||| ||| | |||||||||||| | ||||||| |  |||||||||||||||   | || ||||||||| |    
T  36150733 agtaaatcaccaaattggtccctatctatgtactaaattctcaaattggtccctaactctatga--ataactcaaaatggttcatgtcttttgtcaaatg 36150830  T
Q  146 tttctcagattggtccctgactctattagt 175  Q
    ||||||||||| ||| ||| ||||||||||    
T  36150831 tttctcagatttgtcactggctctattagt 36150860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 17990743 - 17990843
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| |||||||||||||  |||||| ||| |||| | |||| ||||||| |||||||||||  ||||||||||||||||| | | ||||||||| |    
T  17990743 gagtaaaccaccaaattggtcattgtcttcgtatcaaattctcaatttggtccctgactctatta--ataactcaaaatggtctttgtttttgtcaaaag 17990840  T
Q  146 ttt 148  Q
    |||    
T  17990841 ttt 17990843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 22843767 - 22843846
Alignment:
Q  71 tctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctca 152  Q
    ||||||||||||| |||||| ||||||| | | |||||||  |||| |||||||||||||| |||||||||||  |||||||    
T  22843767 tctttgtaccaaattttcaatttggtccctcattctatta--ataattcaaaatggtctctgtctttgtcaaatatttctca 22843846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 258
Target Start/End: Original strand, 8999597 - 8999733
Alignment:
Q  120 aaaatggtctctatctttgtcaaa-cgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatcc 218  Q
    |||||||||| | | ||||||||| ||||| | ||||||||| | | ||||||||||||||   ||| |||| ||  | ||| | |||||||||| ||||    
T  8999597 aaaatggtctatgtttttgtcaaatcgttttttagattggtctccggctctattagttgtt---ttgtatttcaaatcattaccgtaccaaataaaatcc 8999693  T
Q  219 aaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    |||||  ||||| | |||||||| ||||||||||||||||    
T  8999694 aaaaggtattataacattaaccattaaataatatccaaaa 8999733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 13932685 - 13932756
Alignment:
Q  177 gttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaata 248  Q
    ||||||||| |||||||| | ||| | ||||||||||||| ||||| | ||||||  |||||||||||||||    
T  13932685 gttgttttgtattttaagtcattatcgtaccaaataagattcaaaatatattatgtcattaaccactaaata 13932756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 8999799 - 8999762
Alignment:
Q  147 ttctcagattggtccctgactctattagttgttgtttt 184  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  8999799 ttctgagattgatccctgactctattagttgttgtttt 8999762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 34153578 - 34153372
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| |||||||||| || |||| ||||||||||| | |||||||||||  |||||||||||  ||||||||||||| | | | |||||||||||||    
T  34153578 gagtaaaccaccaaattgatcactgtttttgtaccaaattatcaaattggtctatgactctatta--ataactcaaaatgat-tatgtctttgtcaaacg 34153482  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||||| |||||| | ||||||||||| |||||   |||||||||||||| ||||  || ||||||||||||||||  |||||||  ||||||||||||    
T  34153481 tttctcaaattggttcttgactctattaattgtt---ttgcattttaagccattaatgtatcaaataagatccaaaatgcattatgccattaaccactaa 34153385  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  34153384 ataatatccaaaa 34153372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 42950710 - 42950503
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || || ||| |||| ||||||||||  ||| ||| |||| ||||  |||||||||||  ||||||||||||||||  | ||||||||||||     
T  42950710 gagtaaaccatcagattagtctatgtctttgtattaaatttttaaataggtctctgactctatta--ataactcaaaatggtcattgtctttgtcaaaca 42950613  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||||| |||| || ||||||||||||||||||   || |||||||||   ||||| || ||||||||||||||||||||||||| ||||| |||||||    
T  42950612 tttctcatattgatctctgactctattagttgtt---ttacattttaagttattaacgtatcaaataagatccaaaagacattatgttattagccactaa 42950516  T
Q  246 ataatatccaaaa 258  Q
    ||||||| |||||    
T  42950515 ataatattcaaaa 42950503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 41480875 - 41480668
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||||| ||| || ||| || ||||||||||||| | ||| |||| ||| ||||| |||||  |||||||||||||||  || ||||||||||||     
T  41480875 gagtaaatcatcaatttagtccctatctttgtaccaaattctcatattgttccctgactttatta--ataactcaaaatggttactgtctttgtcaaaca 41480778  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||| ||| |||| ||| |||||||||||||||||   ||| |||||||| | ||||| ||||||||||||| | ||||| ||||||  ||||||||||||    
T  41480777 tttttcatattgatccttgactctattagttgtt---ttgtattttaagtcattaacgtaccaaataagattcgaaagatattatgccattaaccactaa 41480681  T
Q  246 ataatatccaaaa 258  Q
    ||||||| |||||    
T  41480680 ataatattcaaaa 41480668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 43 - 176
Target Start/End: Original strand, 7905630 - 7905761
Alignment:
Q  43 atggagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaa 142  Q
    |||||||||| || ||||||  |  |||||||||||||||| ||||||||| |||| |||||||||||  ||||||||||||| ||||| ||||| ||||    
T  7905630 atggagtaaaccatcaaattacttcctgtctttgtaccaaattttcaaattagtccctgactctatta--ataactcaaaatgatctctgtctttatcaa 7905727  T
Q  143 acgtttctcagattggtccctgactctattagtt 176  Q
    |||||| ||||||||||||||| |||||||||||    
T  7905728 acgtttttcagattggtccctggctctattagtt 7905761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 23489064 - 23488937
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||||||||||||| ||  ||||||||||||||| | |||||||||||| ||||||||| |  ||||||||||||||||  | ||||||||||| |    
T  23489064 gagtaaatcaccaaattgatccttgtctttgtaccaaattctcaaattggtccatgactctatga--ataactcaaaatggtcattgtctttgtcaaatg 23488967  T
Q  146 tttctcagattggtccctgactctattagt 175  Q
    ||||||| |||||||| |||||||||||||    
T  23488966 tttctcaaattggtccttgactctattagt 23488937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 11732933 - 11732756
Alignment:
Q  77 taccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagtt 176  Q
    ||||||| | ||| ||| |||| |||||||| ||  |||||||||||||| |  | ||||| ||||  |||||||| |||||||||||||||||||| ||    
T  11732933 taccaaattatcatattagtccctgactctagta--ataactcaaaatggccattgtctttatcaagtgtttctcaaattggtccctgactctattaatt 11732836  T
Q  177 gttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaa 257  Q
     || |||| ||||||||||| ||||| |||||||||||||||||||  |||||||  ||||||||||||||||||| ||||    
T  11732835 ttt-ttttacattttaagccattaacgtaccaaataagatccaaaatgcattatgccattaaccactaaataatattcaaa 11732756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 258
Target Start/End: Complemental strand, 38225798 - 38225594
Alignment:
Q  49 taaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgttt 148  Q
    |||| ||| ||||||||| | |||||| ||||||| | |||||||||||| |||||||||||  |||| | ||||||||   | |||||||||||| ||     
T  38225798 taaaccacgaaattggtcccagtctttataccaaattatcaaattggtccctgactctatta--ataatttaaaatggttcatgtctttgtcaaacattc 38225701  T
Q  149 ctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaata 248  Q
    |||| |||||||||||||||||||| |||||   |||||||||||| | || ||  |||||||| ||||||||||  ||||||  |||||| ||| ||||    
T  38225700 ctcatattggtccctgactctattatttgtt---ttgcattttaagtcattgacgcaccaaataggatccaaaaggtattatgtcattaacaactgaata 38225604  T
Q  249 atatccaaaa 258  Q
    ||||||||||    
T  38225603 atatccaaaa 38225594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 5074620 - 5074489
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || ||||||| ||  | ||||||||||||| | |||||||||||| || ||||||||  |||||||||||||||| || ||||||||||| |    
T  5074620 gagtaaaccatcaaattgatccatatctttgtaccaaattctcaaattggtccctgtctctatta--ataactcaaaatggtccctgtctttgtcaaatg 5074523  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||| |||||||||| |||||||||||||||||||    
T  5074522 tttttcagattggttcctgactctattagttgtt 5074489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 258
Target Start/End: Original strand, 5074253 - 5074458
Alignment:
Q  47 agtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgt 146  Q
    |||||| ||| |||||| ||||  |||||||| |||| ||| |||||||||||  ||||||| |  ||||||||||||  ||||| ||||||||||| ||    
T  5074253 agtaaaacactaaattgatctccatctttgtatcaaatttttaaattggtccta-actctatga--ataactcaaaataatctctgtctttgtcaaatgt 5074349  T
Q  147 ttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaa 246  Q
    |||||| |||| |||| || | |||||| ||||   ||| ||||||| || ||||| ||||||||| |||| | ||| |||||||  ||||||||| |||    
T  5074350 ttctcaaattgatccccgattttattagctgtt---ttgtattttaaaccattaacgtaccaaatatgatcgagaaggcattatgccattaaccaccaaa 5074446  T
Q  247 taatatccaaaa 258  Q
    ||||||||||||    
T  5074447 taatatccaaaa 5074458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 23488927 - 23488827
Alignment:
Q  73 tttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctatt 172  Q
    |||| |||||| | |||||||||||| ||||||||| |  |||| |||||||||||||| |||||||||||  |||||||||||||||| ||||||||||    
T  23488927 tttgaaccaaattctcaaattggtccctgactctatga--ataattcaaaatggtctctgtctttgtcaaatatttctcagattggtccttgactctatt 23488830  T
Q  173 agt 175  Q
    |||    
T  23488829 agt 23488827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 42373289 - 42373403
Alignment:
Q  135 tttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgata 234  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||   ||| |||||||| | |||||||| ||||||| ||||||||||||||||   |    
T  42373289 tttgtcaaacgtttctcacattggtccctgactttattaattgtt---ttgtattttaagtcattaacatatcaaataacatccaaaagacattattcca 42373385  T
Q  235 ttaaccactaaataatat 252  Q
    | ||||| ||||||||||    
T  42373386 tgaaccattaaataatat 42373403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 16997093 - 16997226
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||||||||| || ||||||||||||| | |||| ||||| | | |||||||||  ||||||||||||||||| | ||||||||||| |    
T  16997093 gagtaaaccatcaaattggtccctatctttgtaccaaattatcaatttggttcctaactctatta--ataactcaaaatggtctttgtctttgtcaaatg 16997190  T
Q  146 tttctcagattggtc--cctgactctattagttgtt 179  Q
    |||||||  ||||||  | |||||||||||||||||    
T  16997191 tttctcatgttggtccacatgactctattagttgtt 16997226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 38225454 - 38225575
Alignment:
Q  68 ctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgact 167  Q
    |||||||||||||||| | |||| ||||||| | |||||||||  |||||||||||||||||   | |||||||||  ||| ||||||||||| ||||||    
T  38225454 ctgtctttgtaccaaattctcaatttggtcccttactctatta--ataactcaaaatggtcttggtatttgtcaaatatttttcagattggtctctgact 38225551  T
Q  168 ctattagttgttgttttgcattttaag 194  Q
    ||||||   ||||||||||||||||||    
T  38225552 ctatta---gttgttttgcattttaag 38225575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 11732616 - 11732724
Alignment:
Q  69 tgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactc 168  Q
    ||||||||||||||| |||||| ||||||  |||||||||||  |||| |||||||||||||| || |||| ||  |||||| |||||||||  ||||||    
T  11732616 tgtctttgtaccaaattttcaatttggtcactgactctatta--ataattcaaaatggtctctgtcattgtgaagtgtttcttagattggtctttgactc 11732713  T
Q  169 tattagttgtt 179  Q
    |||| ||||||    
T  11732714 tatttgttgtt 11732724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 23488587 - 23488793
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||| ||||||| ||||||||||||| ||||||| |||| ||||  ||  ||| ||||| |  |||||||||||||||  ||  |||||||||| |    
T  23488587 gagtaaattaccaaatgggtctctgtctttctaccaaattttctaattaatcactgattctatga--ataactcaaaatggttcctgactttgtcaaatg 23488684  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    ||||| |||||| | |   ||||| |||||||||   ||| |||| ||| | ||||| || ||||||||||| ||||  |||||||  | ||||||||||    
T  23488685 tttcttagattgattctatactctcttagttgtt---ttgtattt-aagtcattaacgtatcaaataagatctaaaaaccattatgtcactaaccactaa 23488780  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  23488781 ataatatccaaaa 23488793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 179
Target Start/End: Original strand, 42026946 - 42027074
Alignment:
Q  49 taaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgttt 148  Q
    ||||||||||||||| ||  ||||||| ||||||| ||| ||||||||||  |||| |||||  ||||||||||||| | |   |||||||||||| |||    
T  42026946 taaatcaccaaattgatcattgtctttttaccaaatttttaaattggtccccgactttatta--ataactcaaaatgtttttcgtctttgtcaaaccttt 42027043  T
Q  149 ctcagattggtccctgactctattagttgtt 179  Q
    |||| |||| ||| ||||||||||| |||||    
T  42027044 ctcaaattgatccgtgactctattaattgtt 42027074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 42027308 - 42027105
Alignment:
Q  50 aaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttc 149  Q
    ||||||| ||||| |||  ||||||| ||| ||| | | |||||||||  |||||||||||  |||||| ||||||||   | |||||||||||  ||||    
T  42027308 aaatcactaaattagtcattgtctttatacaaaattcttaaattggtctctgactctatta--ataacttaaaatggttcttgtctttgtcaaatctttc 42027211  T
Q  150 tcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataa 249  Q
    ||| |||| ||||  ||||||||| ||| | | |   |||||||| | ||||  || ||||||||||||||||| |||||||  || |||||||||||||    
T  42027210 tcaaattgatccccaactctattaattgatttat---attttaagtcattaatgtatcaaataagatccaaaaggcattatgtcataaaccactaaataa 42027114  T
Q  250 tatccaaaa 258  Q
    |||||||||    
T  42027113 tatccaaaa 42027105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 18385939 - 18385885
Alignment:
Q  204 taccaaataagatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  18385939 taccaaataagattcaaaagacattatgtcattaaccactaaataatattcaaaa 18385885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 42950341 - 42950472
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||||||||   |||||||||| |||| |||||| ||| ||| | ||| |||||  ||||||||||||| ||| |  | |||||||| |    
T  42950341 gagtaaaccatcaaattggttcttgtctttgtatcaaattttcaatttgatccctaactttatta--ataactcaaaatgatctatgccgttgtcaaatg 42950438  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    |||||||||||||||||| ||||| ||| |||||    
T  42950439 tttctcagattggtccctaactctgttaattgtt 42950472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 6e-40; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 58 - 258
Target Start/End: Original strand, 10388230 - 10388425
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattg 157  Q
    |||||| ||| ||||||| ||||||| ||| ||| |||||  |||||||||||  ||||||||||||||||||| ||||||| ||| |||||||| ||||    
T  10388230 aaattgatctttgtctttataccaaatttttaaactggtctctgactctatta--ataactcaaaatggtctctgtctttgttaaatgtttctcatattg 10388327  T
Q  158 gtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaa 257  Q
    ||| ||||||||||||| ||||   ||| |||||||| | ||||  ||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  10388328 gtctctgactctattaggtgtt---ttgtattttaagtcattaaggtactaaataagatccaaaagacattatgccattaaccacaaaataatatccaaa 10388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 258
Target Start/End: Original strand, 67339 - 67546
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||||||||||||||||  ||||||||||||||| | |||||||||||| ||||| |||||  |||||| ||||||||| || | ||| ||||||     
T  67339 gagtaaatcaccaaattggtccatgtctttgtaccaaattctcaaattggtccctgactatatta--ataacttaaaatggtccctgtttttatcaaaca 67436  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaa 245  Q
    |||||||||||||||||| ||||| |||    |||||||| |||||||  | ||||  ||||||||||||| |||||| ||||| |  || |||||||||    
T  67437 tttctcagattggtccctcactctgtta---attgttttgtattttaactcattaatgtaccaaataagattcaaaaggcattaggccatcaaccactaa 67533  T
Q  246 ataatatccaaaa 258  Q
    |||||||||||||    
T  67534 ataatatccaaaa 67546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 258
Target Start/End: Original strand, 30847636 - 30847831
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattg 157  Q
    |||||||||| ||||||| ||||||| | |  ||||||||  ||| |||||||  |||| | ||||||||| ||||||||||||||||||||||||||||    
T  30847636 aaattggtctatgtctttataccaaattcttgaattggtctatgattctatta--ataatttaaaatggtccctatctttgtcaaacgtttctcagattg 30847733  T
Q  158 gtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaa 257  Q
    ||| || |||||||||   ||||||||| |||||||| | ||||| |||||||||| || ||||| | ||||||  |||||||||||||||  |||||||    
T  30847734 gtctctaactctatta---gttgttttgtattttaagtcattaacgtaccaaataaaatacaaaaaatattatgtcattaaccactaaatagaatccaaa 30847830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 179
Target Start/End: Complemental strand, 67705 - 67577
Alignment:
Q  49 taaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgttt 148  Q
    ||||||| |||||||||| | |||||||||||||| |||||||||||||  ||| | |||||  |||||||||||| |||||  ||||||||| ||||||    
T  67705 taaatcatcaaattggtcccagtctttgtaccaaattttcaaattggtctctgattttatta--ataactcaaaatagtctccgtctttgtcatacgttt 67608  T
Q  149 ctcagattggtccctgactctattagttgtt 179  Q
     ||||||||||||||||||||||||||||||    
T  67607 ttcagattggtccctgactctattagttgtt 67577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 16434804 - 16434934
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||||| |||||| ||||||||||||| | ||||||||||| | ||||||||||  |||||| |||||||| ||| |||||||||||      
T  16434804 gagtaaaccatcaaattagtctctctctttgtaccaaattctcaaattggtcat-gactctatta--ataactaaaaatggtatctgtctttgtcaaaaa 16434900  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    |||||||||||||||| ||||| |||||||||||    
T  16434901 tttctcagattggtccttgactttattagttgtt 16434934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 179
Target Start/End: Original strand, 3687627 - 3687758
Alignment:
Q  49 taaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaa---tggtctctatctttgtcaaacg 145  Q
    |||||||  ||||||||||||||||||||| |||| | |||||||| ||| ||||||| |||  |||||||||||   || | | | |||||||||||||    
T  3687627 taaatcattaaattggtctctgtctttgtatcaaattctcaaattgatccatgactctgtta--ataactcaaaaaaatgttatttgtctttgtcaaacg 3687724  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    |||||||||||||||||  |||||||||||||||    
T  3687725 tttctcagattggtccccaactctattagttgtt 3687758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 3687950 - 3687830
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatt-tcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagatt 156  Q
    |||||||||||||||||| || ||||| | | |||||||||| ||| | |||||   |||||||||||||||||| | ||||||||||||||||||||||    
T  3687950 aaattggtctctgtctttatatcaaaactcttaaattggtccctgagtttattag--taactcaaaatggtctctgtttttgtcaaacgtttctcagatt 3687853  T
Q  157 ggtccctgactctattagttgtt 179  Q
    || ||| |||| | |||||||||    
T  3687852 ggcccccgactttgttagttgtt 3687830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 16435036 - 16434964
Alignment:
Q  187 attttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaaat 259  Q
    |||||||| | ||||| |||||||||||||| ||||  ||||||  |||||||||||||||||||||||||||    
T  16435036 attttaagtcattaacgtaccaaataagatctaaaatgcattatactattaaccactaaataatatccaaaat 16434964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 30122900 - 30122812
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgttt 148  Q
    ||||||||  ||||||||||| |||| | |||||||||||| | ||| |||||  ||||||||||||||||||| ||||||||||| ||||    
T  30122900 aaattggttcctgtctttgtatcaaattctcaaattggtccctaactttatta--ataactcaaaatggtctctgtctttgtcaaatgttt 30122812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 6714603 - 6714532
Alignment:
Q  69 tgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaa 142  Q
    ||||||||||||||| | |||||||||||  ||||| |||||  |||| |||||||||||| | ||||||||||    
T  6714603 tgtctttgtaccaaattctcaaattggtctctgactttatta--ataattcaaaatggtctttgtctttgtcaa 6714532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 30122535 - 30122489
Alignment:
Q  212 aagatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    |||||||||||| |||||||  ||||||||||||||||||| |||||    
T  30122535 aagatccaaaaggcattatgtcattaaccactaaataatatacaaaa 30122489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 30122810 - 30122746
Alignment:
Q  161 cctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacatt 228  Q
    |||||||||||||||||||   |||||||||||  | ||||| ||||||||||||| |||||| ||||    
T  30122810 cctgactctattagttgtt---ttgcattttaaatcattaacgtaccaaataagattcaaaaggcatt 30122746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 35072196 - 35072290
Alignment:
Q  67 tctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccct 163  Q
    ||||||||||||||||| |||||| ||| ||  |||||||||||  |||| |||||| | ||| | |||||  |||||||||||||| | |||||||    
T  35072196 tctgtctttgtaccaaattttcaatttgatcactgactctatta--ataaatcaaaacgatctatgtctttaccaaacgtttctcagttaggtccct 35072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 56 - 258
Target Start/End: Original strand, 34535299 - 34535496
Alignment:
Q  56 ccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagat 155  Q
    ||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||  |||||| ||||||||| ||   |||||||||||||||||| ||    
T  34535299 ccaaattggtccctgtttttgtaccaaattttcaaattagtccttgactctatta--ataacttaaaatggtcactgaatttgtcaaacgtttctcaaat 34535396  T
Q  156 tggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatcca 255  Q
    |||||||||||| |||||   ||| |||||||||||||  | ||||| ||||||||||||| |||||   || ||   ||||||||||||||||||| ||    
T  34535397 tggtccctgactgtatta---gttattttgcattttaaatcattaacgtaccaaataagattcaaaaagtatcatatcattaaccactaaataatattca 34535493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 258
Target Start/End: Original strand, 4066923 - 4067086
Alignment:
Q  87 tcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgc 186  Q
    |||||||||||| |||||||||||  |||| ||||||||||| || ||||||||||| ||||||||||||||||   |||||||| |      ||||||     
T  4066923 tcaaattggtccctgactctatta--ataattcaaaatggtcactgtctttgtcaaaagtttctcagattggtcatcgactctataa------gttttgt 4067014  T
Q  187 attttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    |||||||| | ||||| ||||||||||||||||||||||||||||  ||| || || |||||||||||||||    
T  4067015 attttaagtcattaacgtaccaaataagatccaaaagacattatgtcatttactacgaaataatatccaaaa 4067086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 27133979 - 27134060
Alignment:
Q  178 ttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaaat 259  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  27133979 ttgttttgcattttaagtcattaacgtaccaaataagatccaaaagacattatgccattaaccactaaataatatccaaaat 27134060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 258
Target Start/End: Complemental strand, 49784892 - 49784681
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgt---caa 142  Q
    ||||||| |||||||||||||  ||||||||||||||  | ||| |||||||| |||||||||||  ||||||||||||   |  | | ||| |   |||    
T  49784892 gagtaaaccaccaaattggtccatgtctttgtaccaagttctcatattggtccctgactctatta--ataactcaaaattagccatgttttttttatcaa 49784795  T
Q  143 acgtttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccac 242  Q
    | |||||||||||||||| ||||||||||||||| ||  ||| ||||||||| | ||||| |||  |||||||| ||||||||||||||  |||||||||    
T  49784794 atgtttctcagattggtctctgactctattagttttt--tttacattttaagtcattaacgtacttaataagattcaaaagacattatgccattaaccac 49784697  T
Q  243 taaataatatccaaaa 258  Q
    || ||||||| |||||    
T  49784696 tacataatattcaaaa 49784681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 87 - 258
Target Start/End: Original strand, 33321076 - 33321242
Alignment:
Q  87 tcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagttgttgttttgc 186  Q
    ||||||||||| ||||||||||||  |||| | |||||| ||||| |||||||||||| ||||| | |||| |||| ||||||||||||||||   |||     
T  33321076 tcaaattggtcattgactctatta--ataatttaaaatgatctctgtctttgtcaaacatttcttatattgatccccgactctattagttgtt---ttgt 33321170  T
Q  187 attttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    |||||||| | ||||| |||||||||| || |||||| ||| |||  |||||| | ||||||||||||||||    
T  33321171 attttaagtcattaacgtaccaaataaaattcaaaaggcatcatgtcattaacgattaaataatatccaaaa 33321242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 7481290 - 7481186
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || ||||||||||||||| |||||| |||| | ||||| ||||| | ||||||||||  |||||| ||||||||||||||||||||||||||    
T  7481290 gagtaaaccatcaaattggtctctgtatttgtaacaaattctcaaactggtcttcgactctatta--ataacttaaaatggtctctatctttgtcaaacg 7481193  T
Q  146 tttctca 152  Q
    |||||||    
T  7481192 tttctca 7481186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 27134190 - 27134090
Alignment:
Q  77 taccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattggtccctgactctattagtt 176  Q
    ||||||| ||| ||||||||| ||||||||||||  |||||||||||||||   | ||||||||||| |||||||||||||||| |||||||||||||||    
T  27134190 taccaaatttttaaattggtctttgactctatta--ataactcaaaatggttcatgtctttgtcaaatgtttctcagattggtctctgactctattagtt 27134093  T
Q  177 gtt 179  Q
    |||    
T  27134092 gtt 27134090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 38208548 - 38208442
Alignment:
Q  147 ttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaa 246  Q
    |||||| |||||||||||||||||||||||||| |   ||||||||| ||  |||  ||||||||||||||||||||||||||||  ||||| |||||||    
T  38208548 ttctcaaattggtccctgactctattagttgttct---gcattttaaaccactaaagtaccaaataagatccaaaagacattatgtcattaatcactaaa 38208452  T
Q  247 taatatccaa 256  Q
    ||||||||||    
T  38208451 taatatccaa 38208442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 4067246 - 4067117
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||||| ||||||| || |  ||||||||||||| ||| ||||||||| ||||||||||||  |||||||||||||||| |  ||||||||||| |    
T  4067246 gagtaaatcatcaaattgatcccc-tctttgtaccaaatttttaaattggtcattgactctatta--ataactcaaaatggtcacg-tctttgtcaaatg 4067151  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    |||||||||||||||| ||||||| ||| |||||    
T  4067150 tttctcagattggtccatgactctgttaattgtt 4067117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 27133831 - 27133949
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattg 157  Q
    ||||||||| |||||||||||||||| | | |||||| ||| ||||| |||||  ||||||||||||||||| | ||||||||||||||||||||  |||    
T  27133831 aaattggtccctgtctttgtaccaaattcttaaattgatccctgactttatta--ataactcaaaatggtctatgtctttgtcaaacgtttctcatgttg 27133928  T
Q  158 gtccctgactctattagttgt 178  Q
    | | || ||||||||||||||    
T  27133929 gacactaactctattagttgt 27133949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 49784532 - 49784650
Alignment:
Q  57 caaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagatt 156  Q
    |||||| ||| |||||||||||| ||| |||||| || |||| |||||||||||  ||||||||||||||| | |  |||||||||  ||||||||||||    
T  49784532 caaattagtccctgtctttgtactaaattttcaatttagtccctgactctatta--ataactcaaaatggtatgt--ctttgtcaagtgtttctcagatt 49784627  T
Q  157 ggtccctgactctattagttgtt 179  Q
    |||||||||||| ||||||||||    
T  49784628 ggtccctgactcaattagttgtt 49784650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 34535652 - 34535518
Alignment:
Q  57 caaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagatt 156  Q
    |||||||||| || | ||||||| ||| |||||| ||||||| ||||| |||||  ||||||||||||| |   ||||||| ||| | ||||||||||||    
T  34535652 caaattggtccctctatttgtactaaattttcaatttggtccctgactttatta--ataactcaaaatgattcttatctttatcatatgtttctcagatt 34535555  T
Q  157 ggtccctgactctattagtt--gttgttttgcatttt 191  Q
    |||| |||||||||||||||  ||||||||| |||||    
T  34535554 ggtcgctgactctattagtttagttgttttgtatttt 34535518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 38208583 - 38208522
Alignment:
Q  49 taaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctatta 110  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  38208583 taaaccaccaaattggtctctgtctttgtaccaaattctcaaattggtccctgactctatta 38208522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 23329296 - 23329427
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    ||||||| || |||||||||   | |||||||| |||| | |||| ||||| | |||||||||||  ||| ||| ||||||||||| | |||||||||||    
T  23329296 gagtaaaccatcaaattggttcttatctttgtatcaaattctcaatttggttcctgactctatta--atacctcgaaatggtctctgtgtttgtcaaacg 23329393  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    || |||||||||||| || ||| |||||||||||    
T  23329394 ttactcagattggtctctaactttattagttgtt 23329427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 23329562 - 23329464
Alignment:
Q  152 agattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaagacattatgatattaaccactaaataata 251  Q
    ||||||||| | |||||||||||||  | ||||| |||||||  | ||||  |||||||||||||||||||| |||||||  ||||||||||||||||||    
T  23329562 agattggtctccgactctattagtt--tcttttgtattttaaatcattaatgtaccaaataagatccaaaaggcattatgtcattaaccactaaataata 23329465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 38208269 - 38208381
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattg 157  Q
    |||||||| ||||||||| ||| ||| ||| || ||||||  ||||||||||  |||||||||||||||| | |||||||||||||  ||||||||||||    
T  38208269 aaattggt-tctgtctttatactaaatttttaatttggtctctgactctatt--gataactcaaaatggtttatatctttgtcaaatatttctcagattg 38208365  T
Q  158 gtccctgactctatta 173  Q
    |||  |||| ||||||    
T  38208366 gtcattgacactatta 38208381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 2464278 - 2464202
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaat 124  Q
    ||||||||||||||||| || | ||| ||||||||||| | |||||||||||| |||||||||||  ||||||||||||    
T  2464278 gagtaaatcaccaaattagtttttgtatttgtaccaaattctcaaattggtccatgactctatta--ataactcaaaat 2464202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 33321404 - 33321273
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||||| ||| |||  |||||| ||||||||||| ||| ||||||||   |||||||||||  |||||||||||| |||    ||||||||||||     
T  33321404 gagtaaatcatcaatttgacctctgtttttgtaccaaatttttaaattggtttctgactctatta--ataactcaaaatagtccacgtctttgtcaaact 33321307  T
Q  146 tttctcagattggtccctgactctattagttgtt 179  Q
    ||| ||| |||||||  || |||||||| |||||    
T  33321306 tttttcaaattggtcattgtctctattatttgtt 33321273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 70919 - 70800
Alignment:
Q  58 aaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacgtttctcagattg 157  Q
    ||||||||| |||||||||||| ||| | |||||||||||  |||||||||||  ||| ||||||||||||  | |||||||||||||||||||||||||    
T  70919 aaattggtccctgtctttgtactaaattctcaaattggtctctgactctatta--atagctcaaaatggtccatgtctttgtcaaacgtttctcagattg 70822  T
Q  158 gtccctgactctattagttgtt 179  Q
    ||| ||||||||||||||||||    
T  70821 gtctctgactctattagttgtt 70800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 70591 - 70754
Alignment:
Q  46 gagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttgactctattatgataactcaaaatggtctctatctttgtcaaacg 145  Q
    |||||||||||||||||| | ||   ||||||||  || | |||||||||||| | ||| |||||  |||||| |||||| | ||| |||||||||||||    
T  70591 gagtaaatcaccaaattgatttc---ctttgtactcaattctcaaattggtccctcactttatta--ataacttaaaatgatttctgtctttgtcaaacg 70685  T
Q  146 tttctcagattggtccctgactctattagttgttgttttgcattttaagcccttaacataccaaataagatccaaaa 222  Q
    ||||||||||||| ||| | || |||   |||||||||||     |||||| ||||  |||||||||||||||||||    
T  70686 tttctcagattggcccccggctatat---ttgttgttttg-----taagccattaatgtaccaaataagatccaaaa 70754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 8603 - 8656
Alignment:
Q  205 accaaataagatccaaaagacattatgatattaaccactaaataatatccaaaa 258  Q
    ||||||||| |||||||||| ||||||  |||||||||||||||||||||||||    
T  8603 accaaataatatccaaaagatattatgtcattaaccactaaataatatccaaaa 8656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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