View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9709_low_13 (Length: 259)
Name: NF9709_low_13
Description: NF9709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9709_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 44856551 - 44856306
Alignment:
| Q |
1 |
ttgttgctatgttgggttggaatagggcttggtctgaaccactattgcaagctttctttgttgcttcaaagagtgtttggatggttcatttgttggctaa |
100 |
Q |
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| T |
44856551 |
ttgttgctatgttgggttggaatagggcttggtctgaaccactattgcaagctttctttgttgcttcaaagagtgtttggatggttcatttgttggctaa |
44856452 |
T |
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| Q |
101 |
ttcagttcatccaagtttacaaatatttagagttgataaaggagtcaactttgattctgtttacatggaagatatgggtggggacaagtcttcaaggttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44856451 |
ttcagttcatccaagtttacaaatatttagagttgataaaggagtcaactttgattctgtttacatggaagatatgggtggggacaagtcttcaaggttg |
44856352 |
T |
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| Q |
201 |
gtaccaaacatggttaggattatggttgcacctggtttttatgtct |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44856351 |
gtaccaaacatggttaggattatggttgcacctggtttttatgtct |
44856306 |
T |
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