View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9709_low_19 (Length: 241)

Name: NF9709_low_19
Description: NF9709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9709_low_19
NF9709_low_19
[»] chr8 (32 HSPs)
chr8 (58-236)||(30904526-30904704)
chr8 (60-236)||(17875771-17875948)
chr8 (50-236)||(35482695-35482882)
chr8 (61-236)||(10682225-10682402)
chr8 (58-236)||(27912096-27912276)
chr8 (58-236)||(27958515-27958695)
chr8 (58-236)||(2967871-2968051)
chr8 (59-233)||(17844051-17844224)
chr8 (58-233)||(44379523-44379699)
chr8 (58-233)||(23792749-23792924)
chr8 (96-232)||(38464680-38464815)
chr8 (53-233)||(3691578-3691760)
chr8 (123-233)||(13327431-13327541)
chr8 (126-233)||(20223176-20223282)
chr8 (58-233)||(30928482-30928657)
chr8 (58-233)||(42123870-42124049)
chr8 (58-233)||(27523124-27523299)
chr8 (58-177)||(2968093-2968214)
chr8 (50-177)||(17875993-17876122)
chr8 (81-233)||(4128765-4128918)
chr8 (58-177)||(10682062-10682182)
chr8 (58-157)||(27912342-27912442)
chr8 (58-157)||(27958761-27958861)
chr8 (126-233)||(7899830-7899937)
chr8 (58-177)||(35482925-35483046)
chr8 (58-115)||(14577153-14577210)
chr8 (58-177)||(30904362-30904483)
chr8 (129-172)||(31231317-31231360)
chr8 (58-114)||(20178372-20178428)
chr8 (58-114)||(20223100-20223156)
chr8 (201-236)||(14577010-14577045)
chr8 (50-115)||(27712757-27712822)
[»] chr5 (38 HSPs)
chr5 (58-236)||(3539762-3539940)
chr5 (58-236)||(40833937-40834116)
chr5 (58-236)||(13600611-13600790)
chr5 (58-236)||(20769713-20769892)
chr5 (58-236)||(2094738-2094917)
chr5 (58-236)||(32936371-32936550)
chr5 (58-236)||(30370676-30370855)
chr5 (51-236)||(18485825-18486011)
chr5 (58-234)||(7145534-7145716)
chr5 (58-236)||(35363149-35363334)
chr5 (58-223)||(27843024-27843189)
chr5 (58-233)||(35362086-35362262)
chr5 (50-233)||(15178958-15179142)
chr5 (128-233)||(14274308-14274412)
chr5 (89-233)||(132217-132362)
chr5 (58-172)||(19558102-19558217)
chr5 (58-233)||(25363017-25363192)
chr5 (58-177)||(32936207-32936328)
chr5 (58-177)||(35362985-35363106)
chr5 (126-233)||(32994315-32994422)
chr5 (60-223)||(3294327-3294489)
chr5 (58-157)||(18485660-18485760)
chr5 (58-157)||(30370512-30370612)
chr5 (128-179)||(33568984-33569035)
chr5 (58-157)||(40834180-40834280)
chr5 (53-177)||(13600440-13600568)
chr5 (59-177)||(20769935-20770056)
chr5 (58-177)||(2094576-2094697)
chr5 (58-177)||(7145762-7145883)
chr5 (58-233)||(29171437-29171609)
chr5 (129-172)||(42858555-42858598)
chr5 (58-115)||(20339157-20339214)
chr5 (58-115)||(32994442-32994499)
chr5 (52-108)||(37093738-37093794)
chr5 (127-179)||(38981783-38981835)
chr5 (58-157)||(25363260-25363360)
chr5 (133-171)||(43166584-43166622)
chr5 (128-173)||(27342885-27342930)
[»] chr6 (16 HSPs)
chr6 (58-236)||(4242924-4243103)
chr6 (49-236)||(3218307-3218494)
chr6 (84-236)||(6754945-6755097)
chr6 (58-236)||(33595320-33595499)
chr6 (58-232)||(23068867-23069040)
chr6 (58-236)||(3922704-3922883)
chr6 (58-234)||(14763319-14763496)
chr6 (58-233)||(10810145-10810320)
chr6 (58-177)||(23068697-23068818)
chr6 (58-177)||(33595543-33595664)
chr6 (58-177)||(3218152-3218273)
chr6 (58-177)||(4243146-4243267)
chr6 (58-177)||(6755140-6755261)
chr6 (58-115)||(3922540-3922597)
chr6 (127-171)||(20491722-20491766)
chr6 (58-115)||(14763595-14763652)
[»] chr4 (53 HSPs)
chr4 (58-236)||(33692263-33692442)
chr4 (58-236)||(55140199-55140376)
chr4 (58-236)||(28458687-28458866)
chr4 (58-231)||(52690266-52690442)
chr4 (58-232)||(26202523-26202698)
chr4 (59-236)||(50161282-50161460)
chr4 (58-236)||(20931142-20931322)
chr4 (52-236)||(23163445-23163630)
chr4 (59-236)||(3546490-3546669)
chr4 (58-236)||(21053461-21053640)
chr4 (58-236)||(21707768-21707947)
chr4 (58-236)||(42856967-42857146)
chr4 (58-236)||(48419382-48419561)
chr4 (58-236)||(49621440-49621619)
chr4 (71-236)||(5260208-5260373)
chr4 (53-236)||(33369505-33369692)
chr4 (58-236)||(9525974-9526153)
chr4 (58-236)||(13294603-13294783)
chr4 (58-236)||(41689390-41689572)
chr4 (58-236)||(23549663-23549845)
chr4 (58-236)||(46143437-46143615)
chr4 (58-236)||(37872768-37872943)
chr4 (58-177)||(42856805-42856925)
chr4 (130-233)||(50977620-50977723)
chr4 (58-177)||(33692486-33692606)
chr4 (58-160)||(20930976-20931079)
chr4 (127-233)||(22335505-22335609)
chr4 (58-233)||(25297681-25297859)
chr4 (126-233)||(30799391-30799497)
chr4 (60-177)||(33369735-33369854)
chr4 (58-233)||(2685986-2686156)
chr4 (58-177)||(23163282-23163403)
chr4 (58-177)||(49621661-49621782)
chr4 (58-157)||(13294847-13294947)
chr4 (56-177)||(46143271-46143394)
chr4 (187-236)||(55742739-55742788)
chr4 (58-177)||(52690097-52690217)
chr4 (58-177)||(9525806-9525930)
chr4 (59-177)||(28458523-28458644)
chr4 (126-236)||(30055280-30055390)
chr4 (60-157)||(50161118-50161218)
chr4 (58-177)||(3546712-3546835)
chr4 (128-172)||(53232328-53232372)
chr4 (58-114)||(55742896-55742952)
chr4 (60-115)||(30799295-30799350)
chr4 (129-171)||(3810637-3810679)
chr4 (129-171)||(3818212-3818254)
chr4 (76-179)||(17872337-17872440)
chr4 (58-115)||(5260480-5260537)
chr4 (58-115)||(30799611-30799668)
chr4 (128-165)||(43914640-43914676)
chr4 (58-111)||(55742622-55742675)
chr4 (58-114)||(30055209-30055265)
[»] chr3 (41 HSPs)
chr3 (58-236)||(22316721-22316900)
chr3 (58-236)||(48433968-48434147)
chr3 (58-232)||(28829754-28829928)
chr3 (50-236)||(22975338-22975525)
chr3 (60-234)||(36229766-36229941)
chr3 (58-236)||(37513092-37513271)
chr3 (58-236)||(49620979-49621158)
chr3 (58-236)||(8851970-8852150)
chr3 (58-236)||(23043355-23043534)
chr3 (85-236)||(49984876-49985028)
chr3 (58-236)||(25847446-25847625)
chr3 (85-232)||(55009126-55009273)
chr3 (133-236)||(9296547-9296650)
chr3 (58-236)||(49711565-49711743)
chr3 (58-227)||(35850826-35850993)
chr3 (53-177)||(25847668-25847794)
chr3 (58-233)||(17574374-17574547)
chr3 (60-233)||(44506049-44506223)
chr3 (123-232)||(11121352-11121459)
chr3 (58-157)||(22316964-22317064)
chr3 (58-157)||(8851805-8851905)
chr3 (58-177)||(49711402-49711522)
chr3 (58-152)||(37513340-37513435)
chr3 (129-233)||(3612765-3612870)
chr3 (129-178)||(12012782-12012831)
chr3 (58-115)||(33491692-33491749)
chr3 (59-157)||(11121526-11121626)
chr3 (58-177)||(9296384-9296504)
chr3 (58-177)||(28829975-28830097)
chr3 (129-171)||(43006987-43007029)
chr3 (58-177)||(49621202-49621323)
chr3 (59-114)||(22975633-22975688)
chr3 (60-157)||(36230007-36230106)
chr3 (127-172)||(1341957-1342002)
chr3 (59-161)||(10687834-10687936)
chr3 (127-172)||(34333730-34333775)
chr3 (59-115)||(55009386-55009442)
chr3 (60-115)||(23043186-23043241)
chr3 (60-115)||(48433801-48433856)
chr3 (138-179)||(7603616-7603657)
chr3 (58-115)||(14626392-14626449)
[»] chr2 (34 HSPs)
chr2 (58-236)||(10044746-10044925)
chr2 (58-236)||(9319968-9320147)
chr2 (58-236)||(10108814-10108994)
chr2 (60-231)||(4261156-4261328)
chr2 (58-236)||(17846009-17846188)
chr2 (58-236)||(20364136-20364315)
chr2 (58-236)||(2318494-2318672)
chr2 (58-236)||(18916626-18916805)
chr2 (60-236)||(44536349-44536527)
chr2 (58-236)||(27360120-27360301)
chr2 (58-236)||(601328-601509)
chr2 (58-157)||(2318735-2318834)
chr2 (53-175)||(8322411-8322532)
chr2 (58-233)||(30337425-30337601)
chr2 (58-177)||(20363971-20364092)
chr2 (127-173)||(37084688-37084734)
chr2 (58-177)||(27360345-27360466)
chr2 (59-177)||(9319804-9319924)
chr2 (50-177)||(4261376-4261508)
chr2 (58-177)||(10109038-10109160)
chr2 (58-177)||(17846231-17846352)
chr2 (58-177)||(18916848-18916969)
chr2 (146-233)||(40044468-40044556)
chr2 (129-179)||(9991921-9991971)
chr2 (100-179)||(13862536-13862615)
chr2 (129-233)||(31769954-31770057)
chr2 (138-233)||(43520340-43520435)
chr2 (58-115)||(601620-601677)
chr2 (129-170)||(10520866-10520907)
chr2 (60-114)||(5547339-5547393)
chr2 (141-179)||(41385779-41385817)
chr2 (138-172)||(44769387-44769421)
chr2 (58-115)||(10045035-10045091)
chr2 (156-226)||(37084743-37084813)
[»] chr1 (25 HSPs)
chr1 (59-236)||(30002375-30002552)
chr1 (58-236)||(2026722-2026901)
chr1 (58-236)||(30562785-30562963)
chr1 (58-234)||(12139025-12139202)
chr1 (58-236)||(1549328-1549507)
chr1 (60-234)||(25780057-25780231)
chr1 (58-236)||(17611590-17611769)
chr1 (58-236)||(7114029-7114207)
chr1 (50-236)||(40902493-40902680)
chr1 (58-236)||(17985454-17985632)
chr1 (126-233)||(12115024-12115130)
chr1 (60-157)||(17985290-17985388)
chr1 (50-157)||(30563027-30563136)
chr1 (58-157)||(40902328-40902428)
chr1 (126-233)||(19897346-19897452)
chr1 (58-177)||(17611426-17611547)
chr1 (127-179)||(47193951-47194003)
chr1 (126-233)||(4969435-4969542)
chr1 (128-178)||(30306852-30306902)
chr1 (53-114)||(7113861-7113922)
chr1 (58-115)||(12139312-12139369)
chr1 (58-177)||(2026943-2027064)
chr1 (59-115)||(25779887-25779943)
chr1 (129-175)||(44066951-44066997)
chr1 (58-157)||(12115196-12115296)
[»] chr7 (28 HSPs)
chr7 (58-236)||(32177856-32178035)
chr7 (58-236)||(45746889-45747068)
chr7 (71-236)||(32523215-32523381)
chr7 (52-236)||(19305909-19306094)
chr7 (58-236)||(8437470-8437650)
chr7 (59-234)||(37453234-37453410)
chr7 (58-231)||(49113863-49114037)
chr7 (58-236)||(7417512-7417692)
chr7 (59-236)||(28408244-28408422)
chr7 (85-227)||(2933443-2933586)
chr7 (58-233)||(1511355-1511531)
chr7 (58-232)||(32832235-32832411)
chr7 (123-233)||(29226337-29226446)
chr7 (58-177)||(28408465-28408585)
chr7 (126-233)||(44307688-44307794)
chr7 (58-177)||(7417736-7417856)
chr7 (58-233)||(10878626-10878803)
chr7 (127-179)||(27612277-27612329)
chr7 (60-160)||(32832475-32832576)
chr7 (58-174)||(31894259-31894374)
chr7 (59-177)||(32523426-32523546)
chr7 (129-234)||(30060571-30060675)
chr7 (58-115)||(19305741-19305798)
chr7 (58-115)||(49114150-49114207)
chr7 (58-177)||(8437306-8437427)
chr7 (58-157)||(31894500-31894599)
chr7 (81-157)||(24986742-24986819)
chr7 (58-114)||(44307612-44307668)
[»] scaffold0029 (2 HSPs)
scaffold0029 (85-236)||(137081-137231)
scaffold0029 (58-177)||(136917-137038)
[»] scaffold0002 (2 HSPs)
scaffold0002 (85-236)||(330362-330512)
scaffold0002 (58-177)||(330198-330319)
[»] scaffold1577 (1 HSPs)
scaffold1577 (60-233)||(1041-1214)
[»] scaffold0311 (2 HSPs)
scaffold0311 (126-233)||(12667-12774)
scaffold0311 (58-157)||(12841-12941)
[»] scaffold0347 (1 HSPs)
scaffold0347 (58-113)||(12223-12278)
[»] scaffold0053 (1 HSPs)
scaffold0053 (128-175)||(15263-15310)


Alignment Details
Target: chr8 (Bit Score: 105; Significance: 1e-52; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 30904704 - 30904526
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||       |||||||||||||| ||||||||||||||||||||    
T  30904704 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgacaa 30904605  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  30904604 tatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 30904526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 236
Target Start/End: Original strand, 17875771 - 17875948
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaat 158  Q
    |||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||    
T  17875771 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaat 17875870  T
Q  159 atcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||       ||||||||||| |||||||||  ||||||||||||||||||| |||||||    
T  17875871 atcttatcattttttatgagatttttttcaaagaaatttaattttctagacttgtatgatgaagatttgcatttgcct 17875948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 50 - 236
Target Start/End: Original strand, 35482695 - 35482882
Alignment:
Q  50 aaatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttata 148  Q
    ||||||| |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||    
T  35482695 aaatataggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttata 35482794  T
Q  149 aaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||||||||||       |||||||||| |||||| || |  |||||||||||||||| |||||||||    
T  35482795 aaatgacaatatcttatcattttttatgagatgtttttcaaagaaattcgattttatatgcgtgtatgatgaagatttacgtttgcct 35482882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 10682402 - 10682225
Alignment:
Q  61 aaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgacaat 158  Q
    ||||||||| ||||||| | ||| ||||||||||  ||||||||||||||||||          |||||||||||||| |||||||||||||||||||||    
T  10682402 aaattacacaattagtcccttaactttattttaggaaacactttcgtcctttatttttttttttgtcacgatttagtcctttatgttataaaatgacaat 10682303  T
Q  159 atcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||| |||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  10682302 atcttatcattttttgtgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 10682225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 27912096 - 27912276
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||  ||| ||||||| | ||| |||||||||| ||||||||||||||||||||         |||||||||||||| ||||||||||||||| ||    
T  27912096 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaattac 27912195  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||||        ||||||||||||||||||| | |||| |||||||||||| |||||||||    
T  27912196 aatatcttatcattttttatgagattttttttaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcct 27912276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 27958515 - 27958695
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||  ||| ||||||| | ||| |||||||||| ||||||||||||||||||||         |||||||||||||| ||||||||||||||| ||    
T  27958515 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaattac 27958614  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||||        ||||||||||||||||||| | |||| |||||||||||| |||||||||    
T  27958615 aatatcttatcattttttatgagattttttttaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcct 27958695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 2967871 - 2968051
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||  ||| ||||||| | ||| |||||||||| ||||||||||||| ||||||        |||||||||||||| |||||||||||||||||||    
T  2967871 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcatttatcttatttttgtcacgatttagtcctttatgttataaaatgaca 2967970  T
Q  157 atatcttatca-ttttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||| ||||||||||||       |||||||||||||||||||| | || ||||||||||||||  ||||||||    
T  2967971 atatcttatcatttttttatgagatttttttcaaagaaatttgattttctatgcttctatgatgaagatttatgtttgcct 2968051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 17844224 - 17844051
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||||||||| ||||||| | ||| || ||||||| |||||||||||||||||||         ||||||||||||||||| |||||||||||||||||    
T  17844224 caaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatttattttttgtcacgatttagtcttt-atgttataaaatgacaa 17844126  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| ||||||||| ||||||||       ||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  17844125 tattttatcatttcttatgaga-ttttttcaatgaaatttgattttataggcttgtatgatgaagatttgcgtttg 17844051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 44379523 - 44379699
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| |||| || | ||| || ||||||| ||||||||||||||||||||        || ||||||||||| |||||||||||||||||||    
T  44379523 gcaaaattacacaattaatcccttaacttaattttaggtaacactttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaatgaca 44379622  T
Q  157 atatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
     ||| ||||||||||| |||||||       ||| |||||||||||||||||| | ||||||||||||||||||||||    
T  44379623 ctattttatcatttttgtatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatttgcgtttg 44379699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 23792924 - 23792749
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||||| |||| ||||||| | ||| || ||||||| ||||||||| ||||||||||       || ||||||||||| |||||||||||||||||||     
T  23792924 gcaaaataacacaattagtcccttaacttaattttaggtaacacttttgtcctttatctttttttgtaacgatttagtcctttatgttataaaatgacat 23792825  T
Q  158 tatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| ||||||||||| |||||||       ||| ||||||||||||||| || | ||||||||||||||||||||||    
T  23792824 tattttatcatttttgtatgaga-ttttttcaatgaaatttgattttcttggctagtatgatgaagatttgcgtttg 23792749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 38464680 - 38464815
Alignment:
Q  96 taacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaat 195  Q
    ||||||||| ||||||||||       ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||  ||||    
T  38464680 taacacttttgtcctttatctttttttgtcccgatttagtcctttatgttataaaatgacaatatcttatcattttttatgaga-ttttttcaataaaat 38464778  T
Q  196 ttgattttctaggtttgtatgatgaagatttgcgttt 232  Q
     ||||||| ||||| ||||||||||||||||| ||||    
T  38464779 atgattttttaggtgtgtatgatgaagatttgggttt 38464815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 53 - 233
Target Start/End: Original strand, 3691578 - 3691760
Alignment:
Q  53 tatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaa 150  Q
    |||| |||||||||||| ||||||| | |||  | ||||||| ||||||||||||||||||||         || ||||||||||| |||||||||||||    
T  3691578 tataggcaaaattacacaattagtcccttaacataattttaggtaacactttcgtcctttatctttttttttgtaacgatttagtcctttatgttataaa 3691677  T
Q  151 atgacaatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    |||||| ||| ||||||||||| |||||||       ||| ||||||| |||||||||| | |||||||||||||||| |||||    
T  3691678 atgacactattttatcatttttgtatgaga-ttttttcaatgaaatttaattttctaggctagtatgatgaagatttgtgtttg 3691760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 13327541 - 13327431
Alignment:
Q  123 gtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaag 222  Q
    ||||||||||| || |||||| |||||||||| ||||| ||||||||||||||||||       |||  ||||||||||| ||||| |||||||||||||    
T  13327541 gtcacgatttaatcctttatgatataaaatgataatattttatcattttttatgagatttttttcaataaaatttgatttgctaggcttgtatgatgaag 13327442  T
Q  223 atttgcgtttg 233  Q
    |||||| ||||    
T  13327441 atttgcatttg 13327431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 20223176 - 20223282
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatt 225  Q
    ||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||       ||| |||||||||||||||||| | ||||||||||||||    
T  20223176 acgatttagtcctttatattataaaatgacactattttatcattttttatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatt 20223274  T
Q  226 tgcgtttg 233  Q
    | ||||||    
T  20223275 tacgtttg 20223282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 30928657 - 30928482
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn----gtcacgatttagtcttttatgttataaaatg 153  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||||||||||||||||||           || ||||||||||| ||||||||||||||||    
T  30928657 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatctttttttttttgtaacgatttagtcctttatgttataaaatg 30928558  T
Q  154 acaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| ||| |||||||||   ||||||       ||| |||||||||||||||||| | ||||||||||||||||||||||    
T  30928557 acactattttatcattt---atgagatttttt-caatgaaatttgattttctaggctggtatgatgaagatttgcgtttg 30928482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 42124049 - 42123870
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn----gtcacgatttagtcttttatgttataaaatg 153  Q
    |||||||||||| |||| | || |||||| ||||||| ||||||||||||| ||||||           || ||||||||||| ||||||||||||||||    
T  42124049 gcaaaattacacaattaatttcttaatttaattttaggtaacactttcgtcatttatctttttttttttgtaacgatttagtcctttatgttataaaatg 42123950  T
Q  154 acaatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| ||| ||||||||||| |||||||       ||| |||||||||||||||||| | ||||||||||| ||||||||||    
T  42123949 acactattttatcatttttgtatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaaggtttgcgtttg 42123870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 27523299 - 27523124
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||| |||   ||| || |||||||||||||||||| ||||||||         ||| |||||||||| |||||||||||||||||||    
T  27523299 gcaaaattacacaattcgtcctttaacttaattttagttaacactttcatcctttatatttttcttgtcccgatttagtcctttatgttataaaatgaca 27523200  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||||||||||| |||||  ||||       ||| |||||||||||||||||  |||||||||||| ||||| |||||    
T  27523199 atatcttatcaatttttccgaga-gtttttcaatgaaatttgattttctagacttgtatgatgaaaatttgtgtttg 27523124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 2968214 - 2968093
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  2968214 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 2968115  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  2968114 acatagttatccttttttatga 2968093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 17876122 - 17875993
Alignment:
Q  50 aaatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttata 148  Q
    ||||||| |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| | |||||||||    
T  17876122 aaatataggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctctatgttata 17876023  T
Q  149 aaatgacaatat-cttatcattttttatga 177  Q
    |||| |||| ||  ||||| ||||||||||    
T  17876022 aaataacaacatagttatccttttttatga 17875993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 233
Target Start/End: Original strand, 4128765 - 4128918
Alignment:
Q  81 taattttattttagttaacactttcgtcctttatcnnnnnnngtca-cgatttagtcttttatgttataaaatgacaatatcttatca-ttttttatgag 178  Q
    |||||| ||||||| ||||||||||||||||||||        | | |||||||||| ||||||||||||||||| | ||| |||||| |||||||||||    
T  4128765 taatttaattttaggtaacactttcgtcctttatcttctttttttaacgatttagtcctttatgttataaaatgaaactattttatcatttttttatgag 4128864  T
Q  179 annnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    |       ||| |||||||||||||||||  | ||||||||||||||||||||||    
T  4128865 a-ttttttcaatgaaatttgattttctagactagtatgatgaagatttgcgtttg 4128918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 10682062 - 10682182
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| |||| || | ||| |||||||||| |||||||||||| |||||||       |||||||||||||| ||||||||||||||| ||||    
T  10682062 gcaaaattacacaattaatcccttaactttattttaggtaacactttcgttctttatcttttttagtcacgatttagtcctttatgttataaaataacaa 10682161  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||| ||||||||||    
T  10682162 catagttatccttttttatga 10682182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 27912442 - 27912342
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  27912442 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcatttatgttataaaataaca 27912343  T
Q  157 a 157  Q
    |    
T  27912342 a 27912342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 27958861 - 27958761
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  27958861 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcatttatgttataaaataaca 27958762  T
Q  157 a 157  Q
    |    
T  27958761 a 27958761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 7899830 - 7899937
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatca-ttttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagat 224  Q
    ||||||||||| ||||||||||||||||||| ||| |||||| ||||||||||||       |||  ||||||||||||||||| | ||||||||| |||    
T  7899830 acgatttagtcctttatgttataaaatgacactattttatcatttttttatgaga-ttttttcaataaaatttgattttctaggctagtatgatgacgat 7899928  T
Q  225 ttgcgtttg 233  Q
    |||||||||    
T  7899929 ttgcgtttg 7899937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 35483046 - 35482925
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        ||||| |||||||| ||||||||||||||| |||    
T  35483046 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacaatttagtcctttatgttataaaataaca 35482947  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  35482946 acatagttatccttttttatga 35482925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 14577210 - 14577153
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||    
T  14577210 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 14577153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 30904362 - 30904483
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| |||| || | ||| |||||||||| ||||||||||||||||||||        |||| ||||||||| ||||||||||||||| |||    
T  30904362 gcaaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcaggatttagtcctttatgttataaaataaca 30904461  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  30904462 acatagttatccttttttatga 30904483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 31231360 - 31231317
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcattttt 172  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  31231360 atttagtcctttatgttataaaataacaatatcttatcattttt 31231317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 20178372 - 20178428
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttat 114  Q
    |||||||||||| ||||||| | ||| || ||||||| |||||||||||||||||||    
T  20178372 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 20178428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 20223100 - 20223156
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttat 114  Q
    |||||||||||| ||||||| | ||| || ||||||| |||||||||||||||||||    
T  20223100 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 20223156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 14577010 - 14577045
Alignment:
Q  201 tttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||| |||||||||||||||||||||||||||    
T  14577010 tttctaggcttgtatgatgaagatttgcgtttgcct 14577045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 27712757 - 27712822
Alignment:
Q  50 aaatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    ||||||| | ||||||||||  |||||| | |||||||||||||| ||||| ||| ||||||||||    
T  27712757 aaatatagggaaaattacacttttagtcccttaattttattttaggtaacagtttagtcctttatc 27712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 1e-52; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 3539940 - 3539762
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||| ||||||||||||||||||||    
T  3539940 gcaaaattatacaattagtctcataattttattttaggtaacactttcgtcctttatttttttttgtcacgatttagtcctttatgttataaaatgacaa 3539841  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||  ||||||||    
T  3539840 tatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcct 3539762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 40833937 - 40834116
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  40833937 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 40834036  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  40834037 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 40834116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 13600790 - 13600611
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||||| ||| |||||| ||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||||| |    
T  13600790 gcaaaattacacaattagtctcttaactttattgtaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgata 13600691  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  13600690 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgataaagatttgcgtttgcct 13600611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 20769713 - 20769892
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||| ||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  20769713 gcaaaattacacaattagtcccttaactttattttaggtaatactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 20769812  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  20769813 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcct 20769892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 2094917 - 2094738
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| |||||||||| |||||||||        |||||||||||||| ||||| |||||||||||||    
T  2094917 gcaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgtcacgatttagtcctttatattataaaatgaca 2094818  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  2094817 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 2094738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 32936550 - 32936371
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  32936550 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 32936451  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       ||||||||||||||||| || |  |||||||||||||||| |||||||||    
T  32936450 atatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcct 32936371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 30370855 - 30370676
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| ||||||||||  |||||||||||||||||||       |||||||||||||| ||||||||||||||||||||    
T  30370855 gcaaaattacacaattagtcccttaactttattttaggcaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgacaa 30370756  T
Q  158 tatcttatcattttttatgaga-nnnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||| |        ||||||||||||||||| || | ||||||||||||||||| |||||||||    
T  30370755 tatcttatcattttttatgaaattttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 30370676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 236
Target Start/End: Complemental strand, 18486011 - 18485825
Alignment:
Q  51 aatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataa 149  Q
    |||||| |||||||  ||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||| ||||||    
T  18486011 aatataggcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatcttataa 18485912  T
Q  150 aatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||||||||||       ||||||||||| |||||||| | ||||||||||||||||| |||||||||    
T  18485911 aatgacaatatcttatcattttttatgagatttttttcaaagaaatttaattttctatgcttgtatgatgaagatttacgtttgcct 18485825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 234
Target Start/End: Original strand, 7145534 - 7145716
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn------gtcacgatttagtcttttatgttataaaa 151  Q
    ||||||| |||| ||||||| | ||| |||||||||| ||||||||||||||||||||             |||||||||||||| ||||||||||||||    
T  7145534 gcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttttttgtcacgatttagtcctttatgttataaaa 7145633  T
Q  152 tgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgc 234  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||| | ||||||||||||||||| |||||||    
T  7145634 tgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgc 7145716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 35363334 - 35363149
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||         |||||||||||||| ||||||||||||||||||    
T  35363334 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttcttttttgtcacgatttagtcctttatgttataaaatgac 35363235  T
Q  156 aatatcttatcatt-----ttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||| |     ||||||||||       ||||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  35363234 aatatcttatcagttttaattttatgagatttttttcaaagaaatttgactttctaggcttgtatgatgaagatttacgtttgcct 35363149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 223
Target Start/End: Original strand, 27843024 - 27843189
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||  ||||||| | ||| || ||||||| ||||| ||||||||||||||        || |||||||||||||||||||||||||||||||    
T  27843024 gcaaaattacataattagtcccttaacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcttttatgttataaaatgaca 27843123  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaaga 223  Q
    |||| ||||||||||||||||||       ||| |||||||||||||||||||||||||||||||||    
T  27843124 atattttatcattttttatgaga-tttttccaatgaaatttgattttctaggtttgtatgatgaaga 27843189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 35362262 - 35362086
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| || ||||||| |||| |||||||||||||||        || ||||||||||| |||||||||||||||||||    
T  35362262 gcaaaattacacaattagtcccttaacttaattttaggtaacgctttcgtcctttatcttttttctgtaacgatttagtcctttatgttataaaatgaca 35362163  T
Q  157 atatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
     ||| ||||||||||| |||||||       ||| |||||||||||||||||| | |||||||||||||||| |||||    
T  35362162 ctattttatcatttttgtatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatttgtgtttg 35362086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 233
Target Start/End: Complemental strand, 15179142 - 15178958
Alignment:
Q  50 aaatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttata 148  Q
    ||||||| |||||||||||| ||||||| | ||| || ||||||| ||||||||||||||||||||         | ||||||||||| |||||||||||    
T  15179142 aaatataggcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatcttttttttttaacgatttagtcctttatgttata 15179043  T
Q  149 aaatgacaatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    |||||||| ||| ||||||||||| |||||||       ||| ||||||||||||||| |  | |||||||||||||||| |||||    
T  15179042 aaatgacactattttatcatttttgtatgaga-ttttttcaatgaaatttgattttcttgactagtatgatgaagatttgagtttg 15178958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 233
Target Start/End: Original strand, 14274308 - 14274412
Alignment:
Q  128 gatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttga-ttttctaggtttgtatgatgaagattt 226  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||       ||| ||||||||| ||||  |||||||||||||||||||||    
T  14274308 gatttagtcctttatgttataaaatgacaatatcttattattttttatgaga--tttttcaacgaaatttgagtttttaaggtttgtatgatgaagattt 14274405  T
Q  227 gcgtttg 233  Q
    | |||||    
T  14274406 gagtttg 14274412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 233
Target Start/End: Complemental strand, 132362 - 132217
Alignment:
Q  89 ttttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaatatcttatcattttt-tatgagannnnnnn 186  Q
    |||||| ||||||||||||||||||||        || ||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||           
T  132362 ttttaggtaacactttcgtcctttatcttttttctgtaacgatttagtcctttatgttataaaatgacactattttatcatttttgtatgaga-tttttt 132264  T
Q  187 caaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| |||||||||||||||||| | |||||||||||||||| |||||    
T  132263 caatgaaatttgattttctaggctagtatgatgaagatttgtgtttg 132217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 19558217 - 19558102
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||||||||||||||||||        || ||||||||||| |||||||||||||||||||    
T  19558217 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatcttttttctgtaacgatttagtcctttatgttataaaatgaca 19558118  T
Q  157 atatcttatcattttt 172  Q
     ||| |||||||||||    
T  19558117 ctattttatcattttt 19558102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 25363017 - 25363192
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| |  |||| | ||| || ||||||| ||||||||||||| ||||||       || ||||||||||| |||||||||||||||||||     
T  25363017 gcaaaattacacaaacagtcccttaacttaattttaggtaacactttcgtcatttatctttttttgtaacgatttagtcctttatgttataaaatgacac 25363116  T
Q  158 tatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| ||||||||||| | |||||       ||| ||||||||||||||| |  | ||||||||||||||||||||||    
T  25363117 tattttatcatttttgtttgaga-tttattcaatgaaatttgattttcttgactagtatgatgaagatttgcgtttg 25363192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 32936207 - 32936328
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  32936207 gcaaaattacacaattagtcacttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 32936306  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  32936307 acatagttatccttttttatga 32936328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 35362985 - 35363106
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttat-cnnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||| |       |||||||||||||| ||||||||||||||| |||    
T  35362985 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcctttttttgtcacgatttagtcctttatgttataaaataaca 35363084  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  35363085 acatagttatccttttttatga 35363106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 32994422 - 32994315
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagat 224  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||||| |  | |||||||||||||    
T  32994422 acgatttagtcctttatgttataaaatgacactattttatcatttttgtatgaga-ttttttcaatgaaatttgattttcttgactagtatgatgaagat 32994324  T
Q  225 ttgcgtttg 233  Q
    |||||||||    
T  32994323 ttgcgtttg 32994315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 223
Target Start/End: Original strand, 3294327 - 3294489
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaata 159  Q
    |||||||||| ||| |||||||||||| |||| ||  ||||||||| || ||||||       ||  | |||||||| ||||||||||||||||| ||||    
T  3294327 aaaattacacaatttgtctcataatttaatttcaggcaacactttcatcttttatctttttttgttccaatttagtcctttatgttataaaatgataata 3294426  T
Q  160 tcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaaga 223  Q
    |||||| |||||||||| ||       ||| | ||||||||||| || ||||||||||||||||    
T  3294427 tcttattattttttatgtga-ttttttcaatggaatttgattttttaagtttgtatgatgaaga 3294489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 18485660 - 18485760
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        ||||| |||||||| ||||||||||||||| |||    
T  18485660 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttgttgtcacaatttagtcctttatgttataaaataaca 18485759  T
Q  157 a 157  Q
    |    
T  18485760 a 18485760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 30370512 - 30370612
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||| ||||||        |||||||||||||| ||||||||||||||| |||    
T  30370512 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcttttatcttttttttgtcacgatttagtcatttatgttataaaataaca 30370611  T
Q  157 a 157  Q
    |    
T  30370612 a 30370612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 33568984 - 33569035
Alignment:
Q  128 gatttagtcttttatgttataaaatgacaatatcttatcattttttatgaga 179  Q
    |||||| || ||||||||||||||||||||||||||||||||||| ||||||    
T  33568984 gatttaatcatttatgttataaaatgacaatatcttatcatttttaatgaga 33569035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 40834280 - 40834180
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        ||||| |||||||| ||||||||||||||| |||    
T  40834280 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttctttgtcacaatttagtcctttatgttataaaataaca 40834181  T
Q  157 a 157  Q
    |    
T  40834180 a 40834180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 13600440 - 13600568
Alignment:
Q  53 tatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn---gtcacgatttagtcttttatgttataa 149  Q
    |||| |||||||||||| |||||||   ||  |||||||||| ||||||||||||||||||||          |||||||||||||| ||||||||||||    
T  13600440 tataggcaaaattacacaattagtcctttacctttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctttatgttataa 13600539  T
Q  150 aatgacaatat-cttatcattttttatga 177  Q
    ||| |||| ||  ||||||||||||||||    
T  13600540 aataacaacatagttatcattttttatga 13600568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 20770056 - 20769935
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||||||| ||||||| | |||  ||||||||| |||||||| |||||||||||         |||||||||||||| ||||||||||||||| |||    
T  20770056 caaaattacacaattagtcccttaacattattttaggtaacacttccgtcctttatctttttttttgtcacgatttagtcctttatgttataaaataaca 20769957  T
Q  157 atat-cttatcattttttatga 177  Q
    ||||  ||||| ||||||||||    
T  20769956 atatagttatccttttttatga 20769935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 2094576 - 2094697
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| |||| || | ||| |||||||||| ||||||||| ||||||||||        |||||||||||||| ||||||||||||||| |||    
T  2094576 gcaaaattacacaattaatcccttaactttattttaggtaacactttggtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 2094675  T
Q  157 a-tatcttatcattttttatga 177  Q
    |  |  ||||||||||||||||    
T  2094676 acaaagttatcattttttatga 2094697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 7145883 - 7145762
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||  |||| || | ||| |||||||||| ||||| ||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  7145883 gcaaaattacataattaatcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 7145784  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||||||||||||||    
T  7145783 acatagttatcattttttatga 7145762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 29171609 - 29171437
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| |||  |||| ||| || |||| |  |||||||||||||||| |||       ||| | ||||| |||||||||||||||||||||||    
T  29171609 gcaaaattacacaatttatctcttaacttaatttcacgtaacactttcgtccttcatctttttttgtcccaatttattcttttatgttataaaatgacaa 29171510  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| ||| |||||||| |||||       ||| ||||| ||| |||| |||||||||||||||||||||| |||||    
T  29171509 tattttaacatttttt-tgaga-ttttttcaatgaaatctga-tttccaggtttgtatgatgaagatttgggtttg 29171437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 42858598 - 42858555
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcattttt 172  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  42858598 atttagtcctttatgttataaaatgtcaatatcttatcattttt 42858555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 20339157 - 20339214
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| |||| || | ||| |||||||||| ||||||||||||||||||||    
T  20339157 gcaaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatc 20339214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 32994499 - 32994442
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||||||||||||||||||    
T  32994499 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 32994442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 37093794 - 37093738
Alignment:
Q  52 atatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtc 108  Q
    ||||| |||||||||||| ||||||| | ||| |||||||||| |||||||||||||    
T  37093794 atataggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtc 37093738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 38981835 - 38981783
Alignment:
Q  127 cgatttagtcttttatgttataaaatgacaatatcttatcattttttatgaga 179  Q
    ||||||||||  ||||||||||||||||||| | ||||||| |||||||||||    
T  38981835 cgatttagtcccttatgttataaaatgacaacaccttatcaatttttatgaga 38981783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 25363360 - 25363260
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||  | |||||| ||||||| ||||| ||||||||||||||        || ||||||||||| ||||||||||||||| |||    
T  25363360 gcaaaattacacaattagttccttaatttaattttagataacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaataaca 25363261  T
Q  157 a 157  Q
    |    
T  25363260 a 25363260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 43166622 - 43166584
Alignment:
Q  133 agtcttttatgttataaaatgacaatatcttatcatttt 171  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  43166622 agtcttttatgttataaaatgtcaatatcttataatttt 43166584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 27342930 - 27342885
Alignment:
Q  128 gatttagtcttttatgttataaaatgacaatatcttatcatttttt 173  Q
    ||||||||| |||||||||||||||| | ||| |||||||||||||    
T  27342930 gatttagtcctttatgttataaaatggcgataccttatcatttttt 27342885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 4242924 - 4243103
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| |||||||   |||||||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  4242924 gcaaaattacacaattagtcctttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 4243023  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  4243024 atatcttatcattttttatgagatttttttcaaagaaatttgattttctagatttgtatgatgaagatttacgtttgcct 4243103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 49 - 236
Target Start/End: Complemental strand, 3218494 - 3218307
Alignment:
Q  49 taaatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttat 147  Q
    |||| ||| |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||    
T  3218494 taaaaataggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttat 3218395  T
Q  148 aaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  3218394 aaaatgacaatatcttatcat-ttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 3218307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 84 - 236
Target Start/End: Original strand, 6754945 - 6755097
Alignment:
Q  84 ttttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnn 183  Q
    ||||||||||| ||| ||||| ||||||||||       |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||        
T  6754945 ttttattttaggtaatacttttgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatcattttttatgagatttt 6755044  T
Q  184 nnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  6755045 tttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 6755097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 33595320 - 33595499
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||| |||||| |||||||        |||||||||||||| |||||||||||||||||||    
T  33595320 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 33595419  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||  ||||||||    
T  33595420 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttatgtttgcct 33595499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 232
Target Start/End: Complemental strand, 23069040 - 23068867
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||||| ||| |||||||||| ||||||||||||| ||||||       ||||||||||||||||| |||||||||||||||||    
T  23069040 gcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcatttatctttttttgtcacgatttagtcttt-atgttataaaatgacaa 23068942  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgttt 232  Q
    ||||||||||||||||||||||       ||||||||||||||||| || |  |||||||||||||||| |||||    
T  23068941 tatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgttt 23068867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 3922883 - 3922704
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  3922883 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 3922784  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       ||||||||||||||||| || |  ||||||||||| |||| |||||||||    
T  3922783 atatcttatcattttttatgagatgtttttcaaagaaatttgattttatatgcgtgtatgatgaaaatttacgtttgcct 3922704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 234
Target Start/End: Original strand, 14763319 - 14763496
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||||| || || |||| | ||| |||||||||| |||||||||||| |||||||        |||||| ||||||| |||||||||||||||||||    
T  14763319 gcaaaattatacaatcagtcccttaactttattttaggtaacactttcgtactttatcttttttttgtcacggtttagtcctttatgttataaaatgaca 14763418  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgc 234  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  14763419 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 14763496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 10810320 - 10810145
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| |||||||   |||||| ||||||| ||||||| | ||||||||||        ||||  ||||||||||||||| ||||||||||||    
T  10810320 gcaaaattacacaattagtcctttaatttaattttaggtaacactcttgtcctttatcttttttttgtcattatttagtcttttatgatataaaatgaca 10810221  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    |||| |||| |||||||||||||       ||| |||||||||||||||||| ||||| ||| ||||||||||||||    
T  10810220 atattttattattttttatgaga-ttttttcaatgaaatttgattttctagggttgtacgataaagatttgcgtttg 10810145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 23068697 - 23068818
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  23068697 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 23068796  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  23068797 acatagttatccttttttatga 23068818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 33595664 - 33595543
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  33595664 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 33595565  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  33595564 acatagttatccttttttatga 33595543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 3218152 - 3218273
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtccttta-tcnnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| |||||||||||||||||| |        |||||||||||||| ||||||||||||||| |||    
T  3218152 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaataaca 3218251  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  3218252 acatagttatccttttttatga 3218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 4243267 - 4243146
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||| ||||||||||        |||||||||||||| ||||||||||||||| |||    
T  4243267 gcaaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 4243168  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  4243167 acatagttatccttttttatga 4243146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 6755261 - 6755140
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| |||||||||||| |||||||        |||||||||||||| ||||||||||||||| |||    
T  6755261 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 6755162  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  6755161 acatagttatccttttttatga 6755140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 3922540 - 3922597
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||    
T  3922540 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 3922597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 20491766 - 20491722
Alignment:
Q  127 cgatttagtcttttatgttataaaatgacaatatcttatcatttt 171  Q
    ||||||| || ||||||||||||||||||||||||||||||||||    
T  20491766 cgatttaatcatttatgttataaaatgacaatatcttatcatttt 20491722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 14763652 - 14763595
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||| | ||| |||||||||| ||| ||||||||||||||||    
T  14763652 gcaaaattacacaattagtcccttaactttattttaggtaagactttcgtcctttatc 14763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 33692263 - 33692442
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  33692263 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 33692362  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  33692363 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcatttgcct 33692442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 55140199 - 55140376
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||||||||||||||| || | ||| |||||||||| ||||||||||||||||||||       |||||||||||||| ||||| ||||||||||||||    
T  55140199 gcaaaattacacgattaatcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttattttataaaatgacaa 55140298  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||       |||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  55140299 tatcttatcattttttatgaga-ttttttcaaagaaatttgattttctaggcttgtataatgaagatttgcgtttgcct 55140376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 28458866 - 28458687
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||| ||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  28458866 gcaaaattacacaattagtcccttaactttattttaggtaatactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 28458767  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  28458766 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgttgaagatttgcgtttgcct 28458687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 52690442 - 52690266
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn---gtcacgatttagtcttttatgttataaaatga 154  Q
    |||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||          || ||||||||||| |||||||||||||||||    
T  52690442 gcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatctttttttttggttacgatttagtcgtttatgttataaaatga 52690343  T
Q  155 caatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtt 231  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||||||||    
T  52690342 caatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcgtt 52690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 232
Target Start/End: Original strand, 26202523 - 26202698
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  26202523 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttcttgtcacgatttagtcctttatgttataaaatgaca 26202622  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgttt 232  Q
    |||||||||||||||||||||||       ||||||||||| ||||||| || |||||||||||||||||||||||    
T  26202623 atatcttatcattttttatgagatttttttcaaagaaatttaattttcttggcttgtatgatgaagatttgcgttt 26202698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 50161460 - 50161282
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||    
T  50161460 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaa 50161361  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||       ||||||||||||||||| || | ||||||||||||||||| |||||||||    
T  50161360 tatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 50161282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 20931322 - 20931142
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||||||||||||||  | ||| |||||||||| ||||||||||||||||||||         |||||||||||||| ||||||||||||||||||    
T  20931322 gcaaaattacacgattagttccttaactttattttagataacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgac 20931223  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||| |       |||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  20931222 aatatcttatcattttttatgatatttttttcaaagaaatttgattttctaagcttgtatgatgaagatttacgtttgcct 20931142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 52 - 236
Target Start/End: Complemental strand, 23163630 - 23163445
Alignment:
Q  52 atatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaa 150  Q
    ||||| |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||    
T  23163630 atataggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 23163531  T
Q  151 atgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||| || | |||||| |||||||||| |||||||||    
T  23163530 atgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcttgtataatgaagatttacgtttgcct 23163445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 3546490 - 3546669
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||||||  ||||||| | ||| |||||||||| ||||||||| ||||||||||         |||||||||||||| |||||||||||||||||||    
T  3546490 caaaattacataattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttggtcacgatttagtcctttatgttataaaatgaca 3546589  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  3546590 atatcttatcattttttatgagattcttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 3546669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 21053640 - 21053461
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| |||||||||| |||||||||        || ||||||||||| ||||| |||||||||||||    
T  21053640 gcaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgttacgatttagtcctttatattataaaatgaca 21053541  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  21053540 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 21053461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 21707947 - 21707768
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||||| ||| |||||||||| ||| |||||||| |||||||        |||||||||||||| |||||||||| ||||||||    
T  21707947 gcaaaattacacaattagtctcttaactttattttaggtaatactttcgttctttatcttttttttgtcacgatttagtcctttatgttattaaatgaca 21707848  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||| ||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  21707847 atatcttatcattttttaagagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 21707768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 42857146 - 42856967
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||  ||    
T  42857146 gcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaattgca 42857047  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||| ||||||||||||||| | ||||||||||||||||| |||||||||    
T  42857046 atatcttatcattttttatgagatttttttcaaaaaaatttgattttctaagcttgtatgatgaagatttacgtttgcct 42856967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 48419561 - 48419382
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||| |||| ||||||| | ||| |||||||||| ||||| ||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  48419561 gcaaaataacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 48419462  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  48419461 atatcttatcattttttatgagatttttttcaaaaaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 48419382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 49621440 - 49621619
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  49621440 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 49621539  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       ||||||||||||||||| || |  |||||||||||||||| |||||||||    
T  49621540 atatcttatcattttttatgagatgtttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcct 49621619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 5260208 - 5260373
Alignment:
Q  71 attagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaatatcttatcattt 170  Q
    ||||||| | ||| |||||||||| ||||| ||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||    
T  5260208 attagtcccttaactttattttaggtaacattttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatcattt 5260307  T
Q  171 tttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||       |||||||||||||||||||| | ||||||||||||||||| ||| |||||    
T  5260308 tttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtctgcct 5260373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 236
Target Start/End: Original strand, 33369505 - 33369692
Alignment:
Q  53 tatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn---gtcacgatttagtcttttatgttataa 149  Q
    |||| |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||| ||          |||||||||||||| ||||||||||||    
T  33369505 tataggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttttcttttttttttgtcacgatttagtcatttatgttataa 33369604  T
Q  150 aatgacaatatcttatca-ttttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||| ||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  33369605 aatgacaatatcttatcatttttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 33369692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 9526153 - 9525974
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||| |||| ||||||| | ||| |||||||||| |||||||||| |||||||||        |||||||||||||| |||||||||||||||||||    
T  9526153 gcaaaataacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 9526054  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||        |||||||||||||||| || | ||||||||||||||||| |||||||||    
T  9526053 atatcttatcattttttatgagatttttttaaaagaaatttgattttataagcttgtatgatgaagatttacgtttgcct 9525974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 13294603 - 13294783
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||  ||| ||||||| | ||| |||||||||  ||||||||||||||||||||         |||||||||||||| ||||||||||||||||||    
T  13294603 gcaaaatagcacaattagtcccttaactttattttatgtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgac 13294702  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||||       |||||||||||||||||||| | ||||||||||||||||| | |||||||    
T  13294703 aatatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacatttgcct 13294783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 41689390 - 41689572
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngt---cacgatttagtcttttatgttataaaatga 154  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |   |||||||||||| |||||||||||||||||    
T  41689390 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttttttcacgatttagtcctttatgttataaaatga 41689489  T
Q  155 caatatcttatcattttttatg-agannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||| |         |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  41689490 caatatcttatcattttttatgaatttttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 41689572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 23549845 - 23549663
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn----gtcacgatttagtcttttatgttataaaatg 153  Q
    ||||||||| |||||||||  | ||| |||||||||| ||| ||||||||||||||||           |||||| ||||||| ||||||||||||||||    
T  23549845 gcaaaattatacgattagttccttaactttattttagataatactttcgtcctttatctttttttttttgtcacggtttagtcctttatgttataaaatg 23549746  T
Q  154 acaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||| ||||||||||||||||       |||| |||||| |||||||||| |||||||||||||||||||||||||||    
T  23549745 acaatatctcatcattttttatgagatttttttcaaaaaaatttaattttctaggcttgtatgatgaagatttgcgtttgcct 23549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 46143615 - 46143437
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||  | ||| |||||||||| |||||||||||||||||||         |||||||||||||| ||||| ||||||||||| |    
T  46143615 gcaaaattacacaattagtgccttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatattataaaatgata 46143516  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||| ||||||||||||||||||       |||||||||||||||||||||| || |||||||||||||| |||||||||    
T  46143515 atattttatcattttttatgagatttttttcaaagaaatttgattttctaggctt-tatgatgaagatttacgtttgcct 46143437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 37872768 - 37872943
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn---gtcacgatttagtcttttatgttataaaatga 154  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||| ||||||||||||||          |||||||||||||| |||||||||||||||||    
T  37872768 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttttgtcacgatttagtcctttatgttataaaatga 37872867  T
Q  155 caatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||||       |      ||||||||||||||| ||||||||||||||||| |||||||||    
T  37872868 caatatcttatcattttttatgagatttttttc------atttgattttctaggcttgtatgatgaagatttacgtttgcct 37872943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 42856805 - 42856925
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | |||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||| ||||    
T  42856805 gcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttattttttttggtcacgatttagtcttttatgttataaaataacaa 42856904  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||||||||||||||    
T  42856905 catagttatcattttttatga 42856925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 50977723 - 50977620
Alignment:
Q  130 tttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcg 229  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||||||||       ||| | ||| ||||||| ||||||||||||||||||||||| |    
T  50977723 tttagtcctttatattataaaatgacaatatcgtatcattttttatgagatttttttcaatggaatatgattttttaggtttgtatgatgaagatttgag 50977624  T
Q  230 tttg 233  Q
    ||||    
T  50977623 tttg 50977620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 33692606 - 33692486
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | |||||||||||||| ||||||||||||| ||||||       |||||||||||||| | ||||||||||||| ||||    
T  33692606 gcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcatttatctttttttgtcacgatttagtcctctatgttataaaataacaa 33692507  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||| ||||||||||    
T  33692506 catagttatccttttttatga 33692486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 20930976 - 20931079
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        ||||| |||||||||||||||||||||||| |||    
T  20930976 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacaatttagtcttttatgttataaaataaca 20931075  T
Q  157 atat 160  Q
    ||||    
T  20931076 atat 20931079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 22335505 - 22335609
Alignment:
Q  127 cgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagattt 226  Q
    ||||||| || |||| ||||||||||||||||||||| |||||||||||  ||       ||| ||||| ||||||||||||||||||||||||||||||    
T  22335505 cgatttattcctttacgttataaaatgacaatatcttctcattttttat--gaattttttcaatgaaatctgattttctaggtttgtatgatgaagattt 22335602  T
Q  227 gcgtttg 233  Q
    | |||||    
T  22335603 gggtttg 22335609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 25297681 - 25297859
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc---nnnnnnngtcacgatttagtcttttatgttataaaatga 154  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||||||||||||||||||          || ||||||||||| |||||||||||||||||    
T  25297681 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatcttttttttttgtaacgatttagtcctttatgttataaaatga 25297780  T
Q  155 caatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||  || ||||||||||| |||||||       ||| ||||| |||||||||||| | |||||| |||||||||||||||    
T  25297781 cacaattttatcatttttgtatgaga-ttttttcaatgaaatctgattttctaggctagtatgacgaagatttgcgtttg 25297859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 30799391 - 30799497
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagat 224  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||       ||| |||||||||||||||||| | |||||||||| ||    
T  30799391 acgatttagtcctttatgttataaaatgacactattttatcatttttgtatgaga--tttttcaatgaaatttgattttctaggctagtatgatgaatat 30799488  T
Q  225 ttgcgtttg 233  Q
    |||||||||    
T  30799489 ttgcgtttg 30799497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 33369854 - 33369735
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgacaat 158  Q
    |||||||||| ||||||||| ||| | |||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| ||||     
T  33369854 aaaattacacaattagtctcttaactatattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataacaac 33369755  T
Q  159 at-cttatcattttttatga 177  Q
    ||  ||||||||||||||||    
T  33369754 atagttatcattttttatga 33369735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 2685986 - 2686156
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||||||||||| ||| |        || ||||||||||| ||||||||||||||||||      
T  2685986 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtctttttt---tttttgtaacgatttagtcctttatgttataaaatgacgc 2686082  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| |||||| |||||||||||       ||| |||||||||||||||||| | ||||||||| ||||||||||||    
T  2686083 tattttatca-tttttatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgacgatttgcgtttg 2686156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 23163282 - 23163403
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  23163282 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 23163381  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  23163382 acatagttatccttttttatga 23163403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 49621782 - 49621661
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  49621782 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 49621683  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  49621682 acatagttatccttttttatga 49621661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 13294947 - 13294847
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  13294947 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 13294848  T
Q  157 a 157  Q
    |    
T  13294847 a 13294847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 177
Target Start/End: Original strand, 46143271 - 46143394
Alignment:
Q  56 atgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatga 154  Q
    |||||||||||||| ||||||| | |||||||||||||| ||||| ||||||||||||||        ||||| |||||||| ||||||||||||||| |    
T  46143271 atgcaaaattacacaattagtcccttaattttattttaggtaacattttcgtcctttatcttttttttgtcacaatttagtcctttatgttataaaataa 46143370  T
Q  155 caatat-cttatcattttttatga 177  Q
    ||| ||  ||||| ||||||||||    
T  46143371 caacatagttatccttttttatga 46143394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 55742739 - 55742788
Alignment:
Q  187 caaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  55742739 caaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 55742788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 52690097 - 52690217
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| |||||||||| ||| | ||||||||||||||       |||||||||||||| | ||||||||||||| ||||    
T  52690097 gcaaaattacacaattagtcgcttaactttattttaggtaatattttcgtcctttatctttttttgtcacgatttagtcctctatgttataaaataacaa 52690196  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||| ||||||||||    
T  52690197 catagttatccttttttatga 52690217  T

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Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 9525806 - 9525930
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcc---tttatc-nnnnnnngtcacgatttagtcttttatgttataaaatg 153  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||   ||||||        |||||||||||||| |||||||||||||||     
T  9525806 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtccttttttatcttttttttgtcacgatttagtcatttatgttataaaata 9525905  T
Q  154 acaatat-cttatcattttttatga 177  Q
    |||| ||  ||||||||||||||||    
T  9525906 acaacatagttatcattttttatga 9525930  T

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Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 28458523 - 28458644
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||||||| ||||||| | |||  ||||||||| |||||||| |||||||||||         |||||||||||||| ||||||||||||||| |||    
T  28458523 caaaattacacaattagtcccttaacattattttaggtaacacttccgtcctttatctttttttttgtcacgatttagtcctttatgttataaaataaca 28458622  T
Q  157 atat-cttatcattttttatga 177  Q
    ||||  ||||| ||||||||||    
T  28458623 atatagttatccttttttatga 28458644  T

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Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 30055280 - 30055390
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagat 224  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||       |||  |||||||||||||| |  | ||||||| |||||    
T  30055280 acgatttagtcctttatgttataaaatgacactattttatcatttttgtatgaga-ttttttcaataaaatttgattttcttgactagtatgataaagat 30055378  T
Q  225 ttgcgtttgcct 236  Q
    ||||||||||||    
T  30055379 ttgcgtttgcct 30055390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 50161118 - 50161218
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc---nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||          |||||||||||||| ||||||||||||||| |||    
T  50161118 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttttgtcacgatttagtcctttatgttataaaataaca 50161217  T
Q  157 a 157  Q
    |    
T  50161218 a 50161218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 3546835 - 3546712
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc---nnnnnnngtcacgatttagtcttttatgttataaaatga 154  Q
    |||||||||||| |||||| || ||| |||||||||| ||||||||||||| ||||||          ||||| |||||||| ||||||||||||||| |    
T  3546835 gcaaaattacacaattagtttcttaactttattttaggtaacactttcgtcatttatcttttttttttgtcacaatttagtcctttatgttataaaataa 3546736  T
Q  155 caatat-cttatcattttttatga 177  Q
    ||| ||  ||||||||||||||||    
T  3546735 caacatagttatcattttttatga 3546712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 53232372 - 53232328
Alignment:
Q  128 gatttagtcttttatgttataaaatgacaatatcttatcattttt 172  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||    
T  53232372 gatttagtcctttatattataaaatgacaatatcttattattttt 53232328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 55742952 - 55742896
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttat 114  Q
    |||||||||||| |||||||   ||| |||||||||| |||||||||||||||||||    
T  55742952 gcaaaattacacaattagtcctttaactttattttagataacactttcgtcctttat 55742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 30799295 - 30799350
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||| ||||||| | ||| || ||||||| ||||||||||||||||||||    
T  30799295 aaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatc 30799350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 3810637 - 3810679
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcatttt 171  Q
    |||||||||| |||||||||||||| |||||||||| ||||||    
T  3810637 atttagtcttatatgttataaaatgtcaatatcttagcatttt 3810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 3818212 - 3818254
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcatttt 171  Q
    |||||||||| |||||||||||||| |||||||||| ||||||    
T  3818212 atttagtcttatatgttataaaatgtcaatatcttagcatttt 3818254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 17872337 - 17872440
Alignment:
Q  76 tctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttat 175  Q
    |||| |||||| ||||| |  ||||||||||||||| |||       ||| ||||| |||| |||||| ||||||||||||| | ||||||| |||||||    
T  17872337 tctcttaatttaatttttggaaacactttcgtccttcatcttttttcgtctcgattgagtcctttatgctataaaatgacaacaccttatcaatttttat 17872436  T
Q  176 gaga 179  Q
    ||||    
T  17872437 gaga 17872440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 5260537 - 5260480
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||  ||||||||  ||| |||||||||| ||||| ||||||||||||||    
T  5260537 gcaaaattacataattagtcttttaactttattttaggtaacattttcgtcctttatc 5260480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 30799668 - 30799611
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||| ||||||||||||||    
T  30799668 gcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttatc 30799611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 43914676 - 43914640
Alignment:
Q  128 gatttagtcttttatgttataaaatgacaatatcttat 165  Q
    |||||||||||| |||||||||||||||||||||||||    
T  43914676 gatttagtcttt-atgttataaaatgacaatatcttat 43914640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 55742622 - 55742675
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctt 111  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||| ||||||||||    
T  55742622 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctt 55742675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 30055209 - 30055265
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttat 114  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||||||| |||||||||    
T  30055209 gcaaaattacacaattagtcccttaacttaattttaggtaacacttttgtcctttat 30055265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 22316721 - 22316900
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  22316721 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 22316820  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  22316821 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 22316900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 48434147 - 48433968
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||||||| ||||||| | ||| |||||||||| |||||||||||||||||||          |||||||||||||| ||||||||||||||||||    
T  48434147 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatatatttttttgtcacgatttagtcctttatgttataaaatgac 48434048  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||| |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48434047 aatagcttatcattttttatgagatttttt-caaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 48433968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 232
Target Start/End: Original strand, 28829754 - 28829928
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||    ||| |||||||||| ||||||||||||||||||||       |||||||||||||| ||||||||||||||||||||    
T  28829754 gcaaaattacacaattagttctttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgacaa 28829853  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgttt 232  Q
    ||||||||||||||||||||||       ||||||||||| |||||||| | |||||||||||||||||||||||    
T  28829854 tatcttatcattttttatgagatttttttcaaagaaatttaattttctaagcttgtatgatgaagatttgcgttt 28829928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 50 - 236
Target Start/End: Original strand, 22975338 - 22975525
Alignment:
Q  50 aaatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttata 148  Q
    ||||||| |||||||||||| ||||||| | ||| |||||||||| ||||| ||| ||| ||||||        |||||||||||||| |||||||||||    
T  22975338 aaatataggcaaaattacacaattagtcccttaactttattttaggtaacatttttgtcatttatcttttttttgtcacgatttagtcctttatgttata 22975437  T
Q  149 aaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||| |||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  22975438 aaatgacaatatcttattattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 22975525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 60 - 234
Target Start/End: Original strand, 36229766 - 36229941
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaat 158  Q
    |||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||    
T  36229766 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaat 36229865  T
Q  159 atcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgc 234  Q
    |||||||||||||||||||||       ||||||||||||||||| || |  |||||||||||||||| |||||||    
T  36229866 atcttatcattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgc 36229941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 37513092 - 37513271
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||| |||| ||||||| | ||| |||||||||| ||||||||| ||||||||||        |||||||||||||| |||||||||||||||||||    
T  37513092 gcaaaataacacaattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 37513191  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  37513192 atatcttatcattttttatgagattttttttaaagaaatttgattttctaggcttgtatgatgaagatttacatttgcct 37513271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 49620979 - 49621158
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||||||||||||| ||   ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  49620979 gcaaaattacacgattaatcctctaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 49621078  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||| ||||||||||||||||       ||||||||||||||||| || | ||||||||||||||||| |||||||||    
T  49621079 atatctcatcattttttatgagatttttttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 49621158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 8852150 - 8851970
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||  ||| ||||||| | ||| |||||||||| ||||||||||||||||||||         |||||||||||||| ||||||||||||||||||    
T  8852150 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgac 8852051  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||||       |||||||||||||||||||| | |||| |||||||||||| |||||||||    
T  8852050 aatatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtttgatgaagatttacgtttgcct 8851970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 23043534 - 23043355
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||||||| |||||||   ||| |||||||||| ||||| |||||||||||||          |||||||||||||| ||||||||||||||||||    
T  23043534 gcaaaattacacaattagtcctttaactttattttaggtaacattttcgtcctttatttatttttttgtcacgatttagtcctttatgttataaaatgac 23043435  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  23043434 aatatcttatcattttttatgaga-ttttttcaaagaaatttgattttctaggcttgtatgatgaaggtttgcgtttgcct 23043355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 85 - 236
Target Start/End: Complemental strand, 49985028 - 49984876
Alignment:
Q  85 tttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnn 183  Q
    |||||||||| ||||||||||||| ||||||        |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||        
T  49985028 tttattttaggtaacactttcgtcttttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatcattttttatgagatttt 49984929  T
Q  184 nnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
       |||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  49984928 tttcaaagaaatttgattttctaagtttgtatgatgaatatttacgtttgcct 49984876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 25847446 - 25847625
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||||| || ||||||| | |||||||||||||| |||||||||||| |||||||        |||||||||||||| |||||||||||||||||||    
T  25847446 gcaaaattatacaattagtcccttaattttattttaggtaacactttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 25847545  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       ||||||||||||||| | || |  |||||||||||||||| |||||||||    
T  25847546 atatcttatcattttttatgagatttttttcaaagaaatttgattctatatgcgtgtatgatgaagatttacgtttgcct 25847625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 55009126 - 55009273
Alignment:
Q  85 tttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnn 184  Q
    |||||||||| ||||||||||||||||||||       |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||         
T  55009126 tttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaataacaatatctaatcattttttatgagattttt 55009225  T
Q  185 nncaaagaaatttgattttctaggtttgtatgatgaagatttgcgttt 232  Q
      |||||||||||||||||||| | ||||||||||||||||| |||||    
T  55009226 ttcaaagaaatttgattttctatgcttgtatgatgaagatttacgttt 55009273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 9296650 - 9296547
Alignment:
Q  133 agtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgttt 232  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||  |||||||||||||||| |||||    
T  9296650 agtcctttatgttataaaatgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcatgtatgatgaagatttacgttt 9296551  T
Q  233 gcct 236  Q
    ||||    
T  9296550 gcct 9296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 49711743 - 49711565
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||  ||||||| | ||| |||||||||| |||||||||||||| ||||        ||||| |||||||| ||| ||||||||| ||||||    
T  49711743 gcaaaattacataattagtcccttaactttattttaggtaacactttcgtccgttatttttttttgtcacaatttagtcctttttgttataaa-tgacaa 49711645  T
Q  158 tatcttatcattttttatgagannnnnnnc-aaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||         |||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  49711644 tatcttatcattttttatgagatttttttttaaagaaatttgattttttaggcttgtatgatgaagatttacgtttgcct 49711565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 35850993 - 35850826
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||  ||| ||||  |||||| ||||||| |||||||||||| ||| |||       ||| |||||||||||||||||||||||||||||||    
T  35850993 gcaaaattacataattcgtcttttaatttaattttaggtaacactttcgttcttcatctttttttgtcccgatttagtcttttatgttataaaatgacaa 35850894  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttg 227  Q
    || ||||||| |||||||||||       |||  |||| | |||||||||||||||||||||||||||||    
T  35850893 taccttatcactttttatgaga--tttttcaataaaatctaattttctaggtttgtatgatgaagatttg 35850826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 25847794 - 25847668
Alignment:
Q  53 tatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaa 151  Q
    |||| |||||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||    
T  25847794 tataggcaaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaa 25847695  T
Q  152 tgacaatat-cttatcattttttatga 177  Q
    | |||| ||  ||||||||||||||||    
T  25847694 taacaacatagttatcattttttatga 25847668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 17574374 - 17574547
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||| |||   ||| || ||||||| |||||||||||||||||||        || ||||||||||| ||||||||||||||| ||||    
T  17574374 gcaaaattacacaattcgtccattaacttaattttaggtaacactttcgtcctttatttttttttgttacgatttagtcctttatgttataaaattacaa 17574473  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| ||||||||||||||||||       ||| | ||||||||||| |||| || ||||||||| |||||||||||    
T  17574474 tattttatcattttttatgaga--tttttcaatgcaatttgattttttaggcttttatgatgaaaatttgcgtttg 17574547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 233
Target Start/End: Original strand, 44506049 - 44506223
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaat 158  Q
    |||||||||| |||| || | ||| || ||||||| ||||||||||||||||||||        || ||||||||||| ||||||||||||||||||| |    
T  44506049 aaaattacacaattaatcccttaacttaattttaggtaacactttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaatgacact 44506148  T
Q  159 atcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    || ||||||||||| |||||||       ||| |||||||||||||||||| | |||||||||||||||| |||||    
T  44506149 attttatcatttttgtatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatttgtgtttg 44506223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 11121352 - 11121459
Alignment:
Q  123 gtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaag 222  Q
    |||||| ||||||| |  ||||||||||||||||||||||||||| |||||||||||        ||||||||||||||||||| | |||||||||||||    
T  11121352 gtcacggtttagtcctaaatgttataaaatgacaatatcttatcaatttttatgagatttttg--aaagaaatttgattttctatgcttgtatgatgaag 11121449  T
Q  223 atttgcgttt 232  Q
    |||| |||||    
T  11121450 atttacgttt 11121459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 22317064 - 22316964
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  22317064 gcaaaattacacgattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 22316965  T
Q  157 a 157  Q
    |    
T  22316964 a 22316964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 8851805 - 8851905
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  8851805 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 8851904  T
Q  157 a 157  Q
    |    
T  8851905 a 8851905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 49711402 - 49711522
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| |||||||||| |||||||| |||||||||||        ||||||||||||| ||||||||||||||| ||||    
T  49711402 gcaaaattacacaattagtcccttaactttattttaggtaacacttacgtcctttatctttttttatcacgatttagtcatttatgttataaaataacaa 49711501  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||||||||| ||||    
T  49711502 catagttatcatttttaatga 49711522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 37513435 - 37513340
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaat 152  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||    
T  37513435 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaat 37513340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 3612870 - 3612765
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcatttttt--atgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagattt 226  Q
    |||||||| ||||||||||||||||| | ||| ||||||||||||  ||||||       ||| |||||||||||||||||| | |||||||||||||||    
T  3612870 atttagtcctttatgttataaaatgaaactattttatcattttttttatgagatttttt-caatgaaatttgattttctaggctagtatgatgaagattt 3612772  T
Q  227 gcgtttg 233  Q
    |||||||    
T  3612771 gcgtttg 3612765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 12012782 - 12012831
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcattttttatgag 178  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  12012782 atttagtcttttatgttataaaatgtcaatattttatcattttttatgag 12012831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 33491749 - 33491692
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||    
T  33491749 gcaaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatc 33491692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 11121626 - 11121526
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc--nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||         |||||||||||||| ||||||||||||||| |||    
T  11121626 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaataaca 11121527  T
Q  157 a 157  Q
    |    
T  11121526 a 11121526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 9296384 - 9296504
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||| ||||| ||||||| | ||| |||||||||| |||||||||||||||||||        |||||||||||||| | ||||||||||||| ||||    
T  9296384 gcaaaactacacaattagtcccttaactttattttaggtaacactttcgtcctttatttttttttgtcacgatttagtcatctatgttataaaataacaa 9296483  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||| ||||||||||    
T  9296484 catagttatccttttttatga 9296504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 28830097 - 28829975
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc--nnnnnnngtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||         |||||||||||||| | ||||||||||||| ||    
T  28830097 gcaaaattacacaattagtcccttaactttattttagctaacactttcgtcctttatctttttttttgtcacgatttagtcctctatgttataaaataac 28829998  T
Q  156 aatat-cttatcattttttatga 177  Q
    || ||  ||||| ||||||||||    
T  28829997 aacatagttatccttttttatga 28829975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 43007029 - 43006987
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcatttt 171  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  43007029 atttagttttttatgttataaaatgacaatatcttatcatttt 43006987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 49621323 - 49621202
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||| ||||||        |||||||||||||| ||||| ||||||||| |||    
T  49621323 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcttttatcttttttttgtcacgatttagtcctttatattataaaataaca 49621224  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  49621223 acatagttatccttttttatga 49621202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 22975688 - 22975633
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttat 114  Q
    ||||||||||| ||||||| | ||| |||||||||| |||||||||||||||||||    
T  22975688 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 22975633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 36230106 - 36230007
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc--nnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||| |||| || | ||| |||||||||| ||||||||||||||||||||         |||||||||||||| ||||||||||||||| ||||    
T  36230106 aaaattacacaattaatcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaataacaa 36230007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 1341957 - 1342002
Alignment:
Q  127 cgatttagtcttttatgttataaaatgacaatatcttatcattttt 172  Q
    ||||||| || |||||||| ||||||||||||||||||||||||||    
T  1341957 cgatttattcctttatgttttaaaatgacaatatcttatcattttt 1342002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 10687936 - 10687834
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaat 158  Q
    ||||||||||| ||| ||||| ||| || ||||||| |||||||||| |||||||||         |  |||||||| ||||||||||||||||||||||    
T  10687936 caaaattacacaattcgtctcttaacttaattttaggtaacactttcatcctttatcttttttttacctgatttagtgttttatgttataaaatgacaat 10687837  T
Q  159 atc 161  Q
    |||    
T  10687836 atc 10687834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 34333730 - 34333775
Alignment:
Q  127 cgatttagtcttttatgttataaaatgacaatatcttatcattttt 172  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  34333730 cgatttaatcttttatgttataaaatgtcaatatcatatcattttt 34333775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 55009442 - 55009386
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    ||||||||||| ||||||| | ||| |||||||||  ||||||||||||||||||||    
T  55009442 caaaattacacaattagtcccttaactttattttaagtaacactttcgtcctttatc 55009386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 23043186 - 23043241
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||| || |||| ||||| |||| ||||| ||||||||||||||||||||    
T  23043186 aaaattacacaataagtcccataactttactttaggtaacactttcgtcctttatc 23043241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 48433801 - 48433856
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||| | ||||||| | ||| |||||||||| ||||||||||||||||||||    
T  48433801 aaaattacgcaattagtcccttaactttattttaggtaacactttcgtcctttatc 48433856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 7603657 - 7603616
Alignment:
Q  138 tttatgttataaaatgacaatatcttatcattttttatgaga 179  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  7603657 tttatattataaaatgtcaatatcttatcatattttatgaga 7603616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 14626449 - 14626392
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    ||||||||||||  |||||||| |||||||||||||| |||||  || ||||||||||    
T  14626449 gcaaaattacacttttagtctcttaattttattttaggtaacaacttagtcctttatc 14626392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 10044746 - 10044925
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        ||||| |||||||| |||||||||||||||||||    
T  10044746 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacaatttagtcatttatgttataaaatgaca 10044845  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10044846 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcgtttgcct 10044925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 9320147 - 9319968
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  9320147 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 9320048  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  9320047 atatcttatcattttttatgagatttttttcaaagaaatttgattttctagacttgtatgatgaagatttacgtttgcct 9319968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 10108814 - 10108994
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||| ||||||         |||||||||||||| ||||||||||||||||||    
T  10108814 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcttttatctttttttttgtcacgatttagtcatttatgttataaaatgac 10108913  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||||       ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  10108914 aatatcttatcattttttatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgcct 10108994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 60 - 231
Target Start/End: Original strand, 4261156 - 4261328
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaat 158  Q
    |||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||        || ||||||||||| |||||||||||||||||||||    
T  4261156 aaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttgttacgatttagtcctttatgttataaaatgacaat 4261255  T
Q  159 atcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtt 231  Q
    |||||||||||||||||||||       |||||||||| ||||||||||| ||||||||||||||||||||||    
T  4261256 atcttatcattttttatgagatttttttcaaagaaattagattttctaggcttgtatgatgaagatttgcgtt 4261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 17846009 - 17846188
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||| ||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  17846009 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 17846108  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  17846109 atatcttatcattttttatgagatttttttcaaagaaatttgattttctagacttgtatgatgaagatttacgtttgcct 17846188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 20364315 - 20364136
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| |||||||   ||| |||||||||| |||||||||||||||||||         |||||||||||||| |||||||||||||||||||    
T  20364315 gcaaaattacacaattagtcctttaactttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaatgaca 20364216  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  20364215 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 20364136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 2318494 - 2318672
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||  ||| ||||||| | ||| |||||||||| |||||||||||||||||||        |||||||||||||| ||||||||||||||||||||    
T  2318494 gcaaaatagcacaattagtcccttaactttattttaggtaacactttcgtcctttatttttttttgtcacgatttagtcctttatgttataaaatgacaa 2318593  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||       |||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  2318594 tatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcct 2318672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 18916626 - 18916805
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  18916626 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 18916725  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       ||||||||||||||||| || |  |||||||||||||||| |||||||||    
T  18916726 atatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcct 18916805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 44536527 - 44536349
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaat 158  Q
    |||||||||| ||||||| | ||| |||||||||| |||||||||| |||||||||        |||||||||||||| |||||||||||||||||||||    
T  44536527 aaaattacacaattagtcccttaactttattttaggtaacactttcatcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaat 44536428  T
Q  159 atcttatcattttttatgaga-nnnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  44536427 atcttatcattttttatgagattttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacatttgcct 44536349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 27360120 - 27360301
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn---gtcacgatttagtcttttatgttataaaatga 154  Q
    |||||||||||| ||||||| | ||| |||||||||| ||| | |||||||||||||           ||||| |||||||| |||||||||| ||||||    
T  27360120 gcaaaattacacaattagtcccttaactttattttaggtaatattttcgtcctttatattttttttttgtcacaatttagtcctttatgttattaaatga 27360219  T
Q  155 caatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||| ||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  27360220 caatatcttatcattttttaagagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 27360301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 601328 - 601509
Alignment:
Q  58 gcaaaattacacgattagtctcat-aattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatga 154  Q
    |||||||||||| |||| |||| | || |||||||||| ||||||||||||||||||||         ||||||||||||||||||||  ||||||||||    
T  601328 gcaaaattacacaattaatctctttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcttttataatataaaatga 601427  T
Q  155 caatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||||       ||||||||||||||||| ||   || |||||||||||||| | |||||||    
T  601428 caatatcttatcattttttatgagatttttttcaaagaaatttgattttatatacttttatgatgaagatttacatttgcct 601509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 2318834 - 2318735
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||    
T  2318834 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttcttttgtcacgatttagtcttttatgttataaaataacaa 2318735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 8322532 - 8322411
Alignment:
Q  53 tatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaat 152  Q
    |||| |||||||||||  ||| ||| | ||| || ||||||| ||||| ||||||||||||||        ||||||||||||| |||||||||||||||    
T  8322532 tataggcaaaattacagaattcgtcccttaacttaattttaggtaacattttcgtcctttatcttttttt-tcacgatttagtcctttatgttataaaat 8322434  T
Q  153 gacaatatcttatcattttttat 175  Q
    |||||||||||||||||||||||    
T  8322433 gacaatatcttatcattttttat 8322411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 30337425 - 30337601
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| |||||||   ||| || ||||||| ||||| ||||||||||||||        || ||||||||||| |||||||||||||||||||    
T  30337425 gcaaaattacacaattagtccattaacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaatgaca 30337524  T
Q  157 atatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
     ||| ||||||||||| |||||||       ||| ||||||||||||||| |  | ||||||||||||||||||||||    
T  30337525 ctattttatcatttttgtatgaga-atttttcaatgaaatttgattttcttgaatagtatgatgaagatttgcgtttg 30337601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 20363971 - 20364092
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | |||||||||||||| ||||| ||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  20363971 gcaaaattacacaattagtcccttaattttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 20364070  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  20364071 acatagttatccttttttatga 20364092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 37084688 - 37084734
Alignment:
Q  127 cgatttagtcttttatgttataaaatgacaatatcttatcatttttt 173  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  37084688 cgatttagtcatttatgttataaaatgacaatatcttatcatttttt 37084734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 27360466 - 27360345
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||| ||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  27360466 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 27360367  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  27360366 acatagttatccttttttatga 27360345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 9319804 - 9319924
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||| ||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| ||||    
T  9319804 caaaactacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataacaa 9319903  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||| ||||||||||    
T  9319904 catagttatccttttttatga 9319924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 4261508 - 4261376
Alignment:
Q  50 aaatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc----nnnnnnngtcacgatttagtcttttatgtt 145  Q
    ||||||| |||||||||||| |||||||   ||| |||||||||| ||||||||||||||||||||           |||||||||||||| | ||||||    
T  4261508 aaatataggcaaaattacacaattagtccgttaactttattttaggtaacactttcgtcctttatctttttttttttgtcacgatttagtcctctatgtt 4261409  T
Q  146 ataaaatgacaatat-cttatcattttttatga 177  Q
    ||||||| |||| ||  ||||||||||||||||    
T  4261408 ataaaataacaacatagttatcattttttatga 4261376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 10109160 - 10109038
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctt--tatcnnnnnnngtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||||| |  |||||| | ||| |||||||||||||||||||||||||||  |||        |||||||||||||| ||||||||||||||| ||    
T  10109160 gcaaaattacgcacttagtcccttaactttattttagttaacactttcgtcctttatatttttttttgtcacgatttagtcctttatgttataaaataac 10109061  T
Q  156 aatat-cttatcattttttatga 177  Q
    |||||  ||||| ||||||||||    
T  10109060 aatatagttatccttttttatga 10109038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 17846352 - 17846231
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||||| || ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| | ||||||||||||| |||    
T  17846352 gcaaaattatacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctatatgttataaaataaca 17846253  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  17846252 acatagttatccttttttatga 17846231  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 18916969 - 18916848
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||  ||||||| | ||| |||||||||| |||||||||||| |||||||        |||||||||||||| ||||||||||||||| |||    
T  18916969 gcaaaattacataattagtcccttaactttattttaggtaacactttcgttctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 18916870  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  18916869 acatagttatccttttttatga 18916848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 40044556 - 40044468
Alignment:
Q  146 ataaaatgacaatatcttatcattttttatgagannnnnnncaaa-gaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    |||||||||||||||||||| |||||||||||||         || ||||||||||||||| |||||||||||||||||| || |||||    
T  40044556 ataaaatgacaatatcttattattttttatgagatttttttttaatgaaatttgattttctgggtttgtatgatgaagatctgagtttg 40044468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 9991921 - 9991971
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcattttttatgaga 179  Q
    |||||||| ||||| || |||||||||||||| ||||||||||||||||||    
T  9991921 atttagtcctttatattctaaaatgacaatattttatcattttttatgaga 9991971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 13862536 - 13862615
Alignment:
Q  100 actttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgaga 179  Q
    ||||||||||||||||       ||| ||| |||||| ||||||||||||||||||||||| || |||||||| ||||||    
T  13862536 actttcgtcctttatctttttttgtctcgaattagtcctttatgttataaaatgacaatattttttcatttttaatgaga 13862615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 31770057 - 31769954
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgc 228  Q
    |||||||| | |||||| |||||||||||||| ||||||||||| ||||||       ||| ||||||||| ||||| |  ||||||||||||||||||     
T  31770057 atttagtcctctatgttttaaaatgacaatattttatcatttttaatgaga-ctttttcaatgaaatttgagtttcttgacttgtatgatgaagatttgg 31769959  T
Q  229 gtttg 233  Q
    |||||    
T  31769958 gtttg 31769954  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 43520435 - 43520340
Alignment:
Q  138 tttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    |||||||||||||||||||||||||||||| |||| ||||||       |||  |||| | |||||||  |||||||||||||| ||||| |||||    
T  43520435 tttatgttataaaatgacaatatcttatcaattttaatgagatttttttcaataaaatcttattttcttagtttgtatgatgaaaatttgagtttg 43520340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 601677 - 601620
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||| ||||||||||    
T  601677 gcaaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatc 601620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 10520866 - 10520907
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcattt 170  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  10520866 atttagtcctttatattataaaatgacaatatcttatcattt 10520907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 5547393 - 5547339
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttat 114  Q
    |||||||||| ||||||| | ||| || ||||||| |||||||||||||||||||    
T  5547393 aaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 5547339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 41385817 - 41385779
Alignment:
Q  141 atgttataaaatgacaatatcttatcattttttatgaga 179  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  41385817 atgttataaaatgttaatatcttatcattttttatgaga 41385779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 44769421 - 44769387
Alignment:
Q  138 tttatgttataaaatgacaatatcttatcattttt 172  Q
    ||||||||||||||||||||| |||||||||||||    
T  44769421 tttatgttataaaatgacaatttcttatcattttt 44769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 10045091 - 10045035
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||| | ||||||| | ||| ||| |||||||||||||||||||||||||||    
T  10045091 gcaaaattacgcaattagtcccttaacttt-ttttagttaacactttcgtcctttatc 10045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 37084743 - 37084813
Alignment:
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagattt 226  Q
    ||||||||||||||| |||| |||       ||| ||||| ||||||| ||||||||||||||||||||||    
T  37084743 aatatcttatcatttgttattagatttttttcaatgaaatctgattttttaggtttgtatgatgaagattt 37084813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 30002552 - 30002375
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaat 158  Q
    |||||| |||| ||||||| | ||| |||||||||| ||||| ||||||||||||||       |||||||||||||| |||||||||||||||||||||    
T  30002552 caaaataacacaattagtcccttaactttattttaggtaacattttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaatgacaat 30002453  T
Q  159 atcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30002452 atcttatcattttttatgagattttttttaaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcct 30002375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 2026722 - 2026901
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  2026722 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 2026821  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  2026822 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgaagaagatttacgtttgcct 2026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 30562785 - 30562963
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||||| |||| ||||||| | ||| |||||||||| ||||||||||||||||||||       |||||||||| ||  ||||||||||||||||||||    
T  30562785 gcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttggttctttatgttataaaatgacaa 30562884  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  30562885 tatcttatcattttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 30562963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 58 - 234
Target Start/End: Original strand, 12139025 - 12139202
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||||| |||||||||||||| ||| |||||||| ||||||         |||||||||||||| |||||||||||||||||||    
T  12139025 gcaaaattacacaattagtctcttaattttattttaggtaatactttcgttctttattttttttttgtcacgatttagtcctttatgttataaaatgaca 12139124  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgc 234  Q
    |||||||||||||||||||||||       ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  12139125 atatcttatcattttttatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttgcgtttgc 12139202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 1549328 - 1549507
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||| |||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  1549328 gcaaaataacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 1549427  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  1549428 atatcttatcattttttatgagattttttttaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 1549507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 60 - 234
Target Start/End: Complemental strand, 25780231 - 25780057
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaata 159  Q
    |||||||||| ||||||| | ||| |||||||||| |||||||||||||||||||        |||| ||||||||| ||||||||||||||||||||||    
T  25780231 aaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatttttttttgtcatgatttagtcatttatgttataaaatgacaata 25780132  T
Q  160 tcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgc 234  Q
    ||||||||||||||||||||       |||||||||||||||||||| | ||||||||||||||||| |||||||    
T  25780131 tcttatcattttttatgagatttttttcaaagaaatttgattttctaagcttgtatgatgaagatttacgtttgc 25780057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 17611769 - 17611590
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||  ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||| ||    
T  17611769 gcaaaattacataattagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgtca 17611670  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       ||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  17611669 atatcttatcattttttatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcct 17611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 7114207 - 7114029
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| |||||||   ||| |||||||||| |||||||||||||||||||        ||||| |||||||| ||||||||||||||||||||    
T  7114207 gcaaaattacacaattagtccattaactttattttagataacactttcgtcctttatttttttttgtcacaatttagtcctttatgttataaaatgacaa 7114108  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||       |||| |||||||||||| |||| ||||||||||||||||| |||||||||    
T  7114107 tatcttatcattttttatgagatttttttcaaataaatttgattttttaggcttgtatgatgaagatttacgtttgcct 7114029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 236
Target Start/End: Complemental strand, 40902680 - 40902493
Alignment:
Q  50 aaatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttata 148  Q
    ||||||| | |||||  ||| ||||||| | ||| |||||||||| ||||||||| ||||||||||        |||||||||||||| |||||||||||    
T  40902680 aaatataggtaaaatagcacaattagtcccttaactttattttaggtaacacttttgtcctttatcttttttttgtcacgatttagtcctttatgttata 40902581  T
Q  149 aaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    | |||||||||||||||||||||||||||||       |||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  40902580 agatgacaatatcttatcattttttatgagattattttcaaagaaatttgattttctatgcttgtatgatgaagatttacgtttgcct 40902493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 17985632 - 17985454
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||  ||| ||||||| | ||| |||||||||| ||||| ||||||||||||||        ||||||||||| || ||||| |||||||||||||    
T  17985632 gcaaaatagcacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttaatcctttatattataaaatgaca 17985533  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||| | ||||||||||||||||| || ||||||    
T  17985532 atatcttatcattttttatgaga-ttttttcaaagaaatttgattttctatgcttgtatgatgaagatttacgattgcct 17985454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 12115024 - 12115130
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatt 225  Q
    |||||||| || ||||||||||||||||| | ||| ||||||||||||||||||       ||| |||||||||||||||||| | ||||||||||||||    
T  12115024 acgatttaatcctttatgttataaaatgatactattttatcattttttatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatt 12115122  T
Q  226 tgcgtttg 233  Q
    ||| ||||    
T  12115123 tgcatttg 12115130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 17985290 - 17985388
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| ||||    
T  17985290 aaaattacacaattagtctcttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataacaa 17985388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 30563136 - 30563027
Alignment:
Q  50 aaatatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc--nnnnnnngtcacgatttagtcttttatgttat 147  Q
    ||||||| |||||||||||||||||||| | ||| |||||||||| |||||||||||| |||||||         |||||||||||||| ||||||||||    
T  30563136 aaatataggcaaaattacacgattagtcccttaactttattttaggtaacactttcgttctttatctttttttttgtcacgatttagtcctttatgttat 30563037  T
Q  148 aaaatgacaa 157  Q
    ||||| ||||    
T  30563036 aaaataacaa 30563027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 40902328 - 40902428
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  40902328 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttgttgtcacgatttagtcctttatgttataaaataaca 40902427  T
Q  157 a 157  Q
    |    
T  40902428 a 40902428  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 19897452 - 19897346
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatt 225  Q
    |||||||| || ||||||||||||||||||| ||| ||||||||||||||||||        || |||||||||||||||||| | |||||||| |||||    
T  19897452 acgatttaatcctttatgttataaaatgacactattttatcattttttatgagattttttt-aatgaaatttgattttctaggctagtatgatgtagatt 19897354  T
Q  226 tgcgtttg 233  Q
    ||| ||||    
T  19897353 tgcatttg 19897346  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 17611426 - 17611547
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||  ||||||||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  17611426 gcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatcttttttctgtcacgatttagtcctttatgttataaaataaca 17611525  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  17611526 acatagttatccttttttatga 17611547  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 47194003 - 47193951
Alignment:
Q  127 cgatttagtcttttatgttataaaatgacaatatcttatcattttttatgaga 179  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  47194003 cgatttagtcttttatgttattaaatgacaatatcttatcttttttaatgaga 47193951  T

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Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 4969435 - 4969542
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagat 224  Q
    ||||||||||| |||||||||| |||||||| ||| ||||||||||| |||||||       ||| ||||||||||||||| |  | |||||||||||||    
T  4969435 acgatttagtcctttatgttattaaatgacactattttatcatttttgtatgaga-ttttttcaatgaaatttgattttcttgactagtatgatgaagat 4969533  T
Q  225 ttgcgtttg 233  Q
    |||||||||    
T  4969534 ttgcgtttg 4969542  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 30306852 - 30306902
Alignment:
Q  128 gatttagtcttttatgttataaaatgacaatatcttatcattttttatgag 178  Q
    ||||||||||||||| |||||||||||||||||||||| |||||| |||||    
T  30306852 gatttagtcttttatattataaaatgacaatatcttataatttttaatgag 30306902  T

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Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 7113861 - 7113922
Alignment:
Q  53 tatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttat 114  Q
    |||| |||||||||||| ||||||| | ||| |||||||||| |||||||||||||||||||    
T  7113861 tataggcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttat 7113922  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 12139369 - 12139312
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||    
T  12139369 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 12139312  T

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Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 2027064 - 2026943
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||  ||||||||||||||||||||        ||||| |||||||| ||||||||||||||| |||    
T  2027064 gcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatcttttctttgtcacaatttagtcctttatgttataaaataaca 2026965  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  2026964 acatagttatccttttttatga 2026943  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 25779887 - 25779943
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    ||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||    
T  25779887 caaaattacacaattagtcccttaactttattttagataacactttcgtcctttatc 25779943  T

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Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 44066997 - 44066951
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcattttttat 175  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||||    
T  44066997 atttagtcatttatgttataaaatgtcaatatcttatcaatttttat 44066951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 12115296 - 12115196
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||| ||||||||||||||        || ||||||||||| ||||||||||||||| |||    
T  12115296 gcaaaattacacaattagtcccttaacttaattttaggtaacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaataaca 12115197  T
Q  157 a 157  Q
    |    
T  12115196 a 12115196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 32177856 - 32178035
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| |||||||   ||| |||||||||| ||||| ||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  32177856 gcaaaattacacaattagtcctttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgaca 32177955  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32177956 atatcttatcattttttatgagatttttttcaaagaaatttgattttctaggtttgtatgatgaagatttacgtttgcct 32178035  T

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Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 45747068 - 45746889
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||||| || |||||| || |||||||||||||| ||||||||||||||||||||        ||||||||||||||||| ||||||||||||||||    
T  45747068 gcaaaattatacaattagtttcttaattttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcttt-atgttataaaatgaca 45746970  T
Q  157 atatcttatcattttttatgaga-nnnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45746969 atatcttatcattttttatgagattttttttcaaagaaatttgattttctaggcttgtatgatgaagatttgcgtttgcct 45746889  T

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Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 32523215 - 32523381
Alignment:
Q  71 attagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaatatcttatcatt 169  Q
    ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||||||    
T  32523215 attagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatcatt 32523314  T
Q  170 ttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||       |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  32523315 ttttatgagatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgcct 32523381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 52 - 236
Target Start/End: Complemental strand, 19306094 - 19305909
Alignment:
Q  52 atatatgcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaa 150  Q
    ||||| |||||||  ||| ||||||| | ||| |||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||    
T  19306094 atataggcaaaatagcacaattagtcccttaactttattttagttaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaa 19305995  T
Q  151 atgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||||| | |||||||||||||||||  ||||||||    
T  19305994 atgacaatatcttatcattttttatgagatttttttcaaagaaatttgattttctatgcttgtatgatgaagatttatgtttgcct 19305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 8437650 - 8437470
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||||||  ||||||| | ||| |||||||||| ||||||||||||||||||||         |||||||||||||| |||||||||||||||| |    
T  8437650 gcaaaattacataattagtcccttaactttattttaggtaacactttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgcc 8437551  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||||       ||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  8437550 aatatcttatcattttttatgagatttttttcaaagaaatttaattttctaggcttgtatgatgaagatttacgtttgcct 8437470  T

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Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 234
Target Start/End: Complemental strand, 37453410 - 37453234
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||||||||| || |||| | ||| |||||||||| ||||||||||||||||||||        |||||| ||||||| ||||||||||||||||||||    
T  37453410 caaaattacacaatcagtcccttaactttattttaggtaacactttcgtcctttatcttttttttgtcacggtttagtcctttatgttataaaatgacaa 37453311  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgc 234  Q
    |||||||||||||||||||| |       |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  37453310 tatcttatcattttttatgaaatttttttcaaagaaatttgattttctaggcttgtatgatgaagatttacgtttgc 37453234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 49113863 - 49114037
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| |||||||   ||| |||||||||| ||||||||||||||||||||        || ||||||||||| |||||||||||||||||||    
T  49113863 gcaaaattacacaattagtcctttaactttattttaggtaacactttcgtcctttatcttttttttgttacgatttagtcctttatgttataaaatgaca 49113962  T
Q  157 atatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtt 231  Q
    |||||||||||||||||||||||       |||||||||||||||||| ||| ||||||||||||||||| ||||    
T  49113963 atatcttatcattttttatgagatttttttcaaagaaatttgattttccaggcttgtatgatgaagatttacgtt 49114037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 7417512 - 7417692
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn--gtcacgatttagtcttttatgttataaaatgac 155  Q
    |||||||||||| |||| || | ||| |||||||||| ||||| ||||||||||||||         |||||||||||||| ||||||||||||||||||    
T  7417512 gcaaaattacacaattaatcccttaactttattttaggtaacattttcgtcctttatctttttttttgtcacgatttagtcctttatgttataaaatgac 7417611  T
Q  156 aatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    |||||||||||||||| |||||||        ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  7417612 aatatcttatcattttgtatgagattttttttaaagaaatttgattttctagacttgtatgatgaagatttgcgtttgcct 7417692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 28408244 - 28408422
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||||||||| ||||| | | ||| |||||||||| ||||||||||||||||||||        |||| ||||||||| ||||||||||||||||||||    
T  28408244 caaaattacacaattagccccttaactttattttaggtaacactttcgtcctttatcttttttttgtcatgatttagtcctttatgttataaaatgacaa 28408343  T
Q  158 tatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
    ||||||||||||||||||||||       ||||||||||||||||| || |  |||||||||||||||| |||||||||    
T  28408344 tatcttatcattttttatgagatttttttcaaagaaatttgattttatatgcgtgtatgatgaagatttacgtttgcct 28408422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 2933586 - 2933443
Alignment:
Q  85 tttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnn 183  Q
    |||||||||| |||||||||||||||||||         |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||        
T  2933586 tttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaatgaaaatatcttatcattttttatgagattct 2933487  T
Q  184 nnncaaagaaatttgattttctaggtttgtatgatgaagatttg 227  Q
       |||||||||||||||||||| | |||||||||||| |||||    
T  2933486 tttcaaagaaatttgattttctatgcttgtatgatgaaaatttg 2933443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 1511531 - 1511355
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| || | ||||| ||||||||||||||||||||       || ||||||||||| |||||||||||||||||||     
T  1511531 gcaaaattacacaattagtcccttaacttaaatttaggtaacactttcgtcctttatctttttttgtaacgatttagtcctttatgttataaaatgacac 1511432  T
Q  158 tatcttatcatt--ttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    ||| ||||||||  ||||||||||       ||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  1511431 tattttatcattttttttatgaga-ttttttcaatgaaatttgattttctaggttagtatgatgaagatttacgtttg 1511355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 232
Target Start/End: Original strand, 32832235 - 32832411
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgaca 156  Q
    ||||||| | || ||||||| | |||||||||||||| |||||||||  || ||||||        ||||| |||||||| |||||||||||||||||||    
T  32832235 gcaaaataatacaattagtcccttaattttattttaggtaacacttttatcttttatcttttttttgtcacaatttagtcctttatgttataaaatgaca 32832334  T
Q  157 atatcttatcattttttatgaga-nnnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgttt 232  Q
    |||||||||||||||||||||||        |||||||||||||||||||| | |||||||||||| |||| |||||    
T  32832335 atatcttatcattttttatgagattttttttcaaagaaatttgattttctatgcttgtatgatgaaaatttacgttt 32832411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 29226337 - 29226446
Alignment:
Q  123 gtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaag 222  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||        ||| ||||||||||||||||   |||||| ||||||    
T  29226337 gtcacgatttagtcctttatgttataaaatgataatatcttatcattttttatgag-tttttttcaatgaaatttgattttctaaaattgtataatgaag 29226435  T
Q  223 atttgcgtttg 233  Q
    |||||||||||    
T  29226436 atttgcgtttg 29226446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 28408585 - 28408465
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||       |||||||||||||| ||||||||||||||| ||||    
T  28408585 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttatgttataaaataacaa 28408486  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||| ||||||||||    
T  28408485 catagttatccttttttatga 28408465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 44307688 - 44307794
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatt 225  Q
    ||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||       ||| |||||||||||||||||| | ||||||||||||||    
T  44307688 acgatttagtcctttatattataaaatgacactattttatcattttttatgaga-ttttttcaatgaaatttgattttctaggctagtatgatgaagatt 44307786  T
Q  226 tgcgtttg 233  Q
    | ||||||    
T  44307787 tacgtttg 44307794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 7417856 - 7417736
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||       |||||||||||||| ||| ||||||||||| ||||    
T  7417856 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatctttttttgtcacgatttagtcctttttgttataaaataacaa 7417757  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||| ||||||||||    
T  7417756 catagttatccttttttatga 7417736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 233
Target Start/End: Original strand, 10878626 - 10878803
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn---gtcacgatttagtcttttatgttataaaatga 154  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||||||||||||||||||          || ||||||||||| |||||||||||||||||    
T  10878626 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttatcttttttttttgtaacgatttagtcctttatgttataaaatga 10878725  T
Q  155 caatatcttatca-ttttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    || ||| |||||| ||||||||||||       ||| ||||||||| |||||||| | ||||||||| ||||||||||||    
T  10878726 cactattttatcatttttttatgaga-ttttttcaatgaaatttga-tttctaggctagtatgatgacgatttgcgtttg 10878803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 27612329 - 27612277
Alignment:
Q  127 cgatttagtcttttatgttataaaatgacaatatcttatcattttttatgaga 179  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  27612329 cgatttagtcttatatgttataaaatgacaatatcttatcatttttaatgaga 27612277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 32832576 - 32832475
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgacaat 158  Q
    |||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||         ||||||||||||| ||||||||||||||| |||||    
T  32832576 aaaattacacaattagtcccttaattttattttaggtaacactttcgtcctttatcttttttttatcacgatttagtcctttatgttataaaataacaat 32832477  T
Q  159 at 160  Q
    ||    
T  32832476 at 32832475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 31894259 - 31894374
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| | ||||| | ||| || ||||||| |||||||||||||||||||        || ||||||||||| |||||||||||||||||||     
T  31894259 gcaaaattacacaaatagtcccttaacttaattttaggtaacactttcgtcctttat-tttttttgtaacgatttagtcctttatgttataaaatgacac 31894357  T
Q  158 tatcttatcatttttta 174  Q
    ||| |||||||||||||    
T  31894358 tattttatcatttttta 31894374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 32523546 - 32523426
Alignment:
Q  59 caaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    ||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||        |||||||||||||| ||||||||||||||| ||||    
T  32523546 caaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatcttttatttgtcacgatttagtcctttatgttataaaataacaa 32523447  T
Q  158 tat-cttatcattttttatga 177  Q
     ||  ||||| ||||||||||    
T  32523446 catagttatccttttttatga 32523426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 234
Target Start/End: Complemental strand, 30060675 - 30060571
Alignment:
Q  129 atttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgc 228  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||| ||||       ||| |||||  ||||||||  ||||||||||||||||||||     
T  30060675 atttagtcctttatgttatgaaatgacaatattttatcattttttaagaga-ttttttcaatgaaatcggattttctttgtttgtatgatgaagatttgg 30060577  T
Q  229 gtttgc 234  Q
    ||||||    
T  30060576 gtttgc 30060571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 19305741 - 19305798
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||    
T  19305741 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 19305798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 49114207 - 49114150
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc 115  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||||||||||||||||||    
T  49114207 gcaaaattacacaattagtcccttaactttattttaggtaacactttcgtcctttatc 49114150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 8437306 - 8437427
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||  ||||||||||||||||||||        |||| ||||||||| ||||||||||||||| |||    
T  8437306 gcaaaattacacaattagtcccttaactttattttatgtaacactttcgtcctttatcttttttctgtcatgatttagtcctttatgttataaaataaca 8437405  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  8437406 acatagttatccttttttatga 8437427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 31894599 - 31894500
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||| |||||||||||||        || ||||||||||| ||||||||||||||| ||||    
T  31894599 gcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttatttttttttgtaacgatttagtcctttatgttataaaataacaa 31894500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 24986742 - 24986819
Alignment:
Q  81 taattttattttagttaacactttcgtccttta-tcnnnnnnngtcacgatttagtcttttatgttataaaatgacaa 157  Q
    |||||||||||||| |||||||||||||||||| |        |||||||||||||| ||||||||||||||| ||||    
T  24986742 taattttattttaggtaacactttcgtcctttattttttttttgtcacgatttagtcctttatgttataaaataacaa 24986819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 44307612 - 44307668
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttat 114  Q
    |||||||||||| ||||||| | ||| || ||||||| |||||||||||||||||||    
T  44307612 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtcctttat 44307668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 236
Target Start/End: Complemental strand, 137231 - 137081
Alignment:
Q  85 tttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnn 183  Q
    |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||        
T  137231 tttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatcattttt--tgagatttt 137134  T
Q  184 nnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
       ||||||||||||||||| || | ||||||||||||||||| |||||||||    
T  137133 tttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 137081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 136917 - 137038
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||| ||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  136917 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 137016  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  137017 acatagttatccttttttatga 137038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 236
Target Start/End: Complemental strand, 330512 - 330362
Alignment:
Q  85 tttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaatatcttatcattttttatgagannnn 183  Q
    |||||||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||  |||||        
T  330512 tttattttaggtaacactttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaatgacaatatcttatcattttt--tgagatttt 330415  T
Q  184 nnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttgcct 236  Q
       ||||||||||||||||| || | ||||||||||||||||| |||||||||    
T  330414 tttcaaagaaatttgattttatatgcttgtatgatgaagatttacgtttgcct 330362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 330198 - 330319
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| |||||||||| ||||| ||||||||||||||        |||||||||||||| ||||||||||||||| |||    
T  330198 gcaaaattacacaattagtcccttaactttattttaggtaacattttcgtcctttatcttttttttgtcacgatttagtcctttatgttataaaataaca 330297  T
Q  157 atat-cttatcattttttatga 177  Q
    | ||  ||||| ||||||||||    
T  330298 acatagttatccttttttatga 330319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1577 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 233
Target Start/End: Complemental strand, 1214 - 1041
Alignment:
Q  60 aaaattacacgattagtctcataattttattttagttaacactttcgtcctttatcnnnnnnn-gtcacgatttagtcttttatgttataaaatgacaat 158  Q
    |||||||||| |||||||   |||||| ||||||| ||||||| |||| |||||||        ||||||||||||||||||||| ||||||||||| ||    
T  1214 aaaattacacaattagtcctttaatttaattttaggtaacactctcgttctttatcttttttttgtcacgatttagtcttttatgatataaaatgactat 1115  T
Q  159 atcttatcattttttatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagatttgcgtttg 233  Q
    || |||| |||||||||||||       ||| ||||| |||||||||||| ||||| ||| ||||||||||||||    
T  1114 attttattattttttatgaga-ttttttcaatgaaatgtgattttctagggttgtacgataaagatttgcgtttg 1041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 12667 - 12774
Alignment:
Q  126 acgatttagtcttttatgttataaaatgacaatatcttatcattttt-tatgagannnnnnncaaagaaatttgattttctaggtttgtatgatgaagat 224  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||       ||| ||||||||||||||| |  | |||||||||||||    
T  12667 acgatttagtcctttatgttataaaatgacactattttatcatttttgtatgaga-ttttttcaatgaaatttgattttcttgactagtatgatgaagat 12765  T
Q  225 ttgcgtttg 233  Q
    |||||||||    
T  12766 ttgcgtttg 12774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 12941 - 12841
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtcctttatc-nnnnnnngtcacgatttagtcttttatgttataaaatgaca 156  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||| ||||||||||||||        || ||||||||||| ||||||||||||||| |||    
T  12941 gcaaaattacacaattagtcccttaacttaattttagataacattttcgtcctttatcttttttttgtaacgatttagtcctttatgttataaaataaca 12842  T
Q  157 a 157  Q
    |    
T  12841 a 12841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 12278 - 12223
Alignment:
Q  58 gcaaaattacacgattagtctcataattttattttagttaacactttcgtccttta 113  Q
    |||||||||||| ||||||| | ||| || ||||||| ||||||||||||||||||    
T  12278 gcaaaattacacaattagtcccttaacttaattttaggtaacactttcgtccttta 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 15310 - 15263
Alignment:
Q  128 gatttagtcttttatgttataaaatgacaatatcttatcattttttat 175  Q
    ||||||||  ||||||||||||||||||||| |||||| |||||||||    
T  15310 gatttagttctttatgttataaaatgacaatttcttataattttttat 15263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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