View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9709_low_22 (Length: 224)

Name: NF9709_low_22
Description: NF9709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9709_low_22
NF9709_low_22
[»] chr4 (46 HSPs)
chr4 (17-200)||(52560804-52560984)
chr4 (123-202)||(30295551-30295630)
chr4 (123-202)||(30324453-30324532)
chr4 (123-177)||(3442906-3442960)
chr4 (127-176)||(28221289-28221338)
chr4 (123-167)||(17859851-17859895)
chr4 (123-167)||(20753103-20753147)
chr4 (123-167)||(49280647-49280691)
chr4 (134-177)||(34684631-34684674)
chr4 (126-176)||(3465647-3465697)
chr4 (134-176)||(12856248-12856290)
chr4 (123-177)||(38433374-38433428)
chr4 (126-167)||(534745-534786)
chr4 (123-200)||(548865-548942)
chr4 (126-167)||(27584039-27584080)
chr4 (123-176)||(30152178-30152231)
chr4 (123-176)||(31578081-31578134)
chr4 (123-176)||(41003150-41003203)
chr4 (123-167)||(2487360-2487404)
chr4 (124-176)||(12820384-12820436)
chr4 (123-167)||(20266936-20266980)
chr4 (128-176)||(39992899-39992947)
chr4 (123-167)||(41943980-41944024)
chr4 (123-167)||(54304907-54304951)
chr4 (128-167)||(11039919-11039958)
chr4 (124-167)||(15021498-15021541)
chr4 (123-162)||(19311873-19311912)
chr4 (123-166)||(22478718-22478761)
chr4 (133-176)||(31152582-31152625)
chr4 (123-166)||(52743281-52743324)
chr4 (141-175)||(1297918-1297952)
chr4 (123-177)||(9285637-9285691)
chr4 (134-176)||(32885752-32885794)
chr4 (123-173)||(33944341-33944391)
chr4 (134-175)||(8941573-8941614)
chr4 (123-176)||(9924920-9924973)
chr4 (126-167)||(35451102-35451143)
chr4 (134-167)||(36008348-36008381)
chr4 (124-176)||(6330915-6330967)
chr4 (123-167)||(13073133-13073177)
chr4 (123-167)||(22158320-22158364)
chr4 (124-176)||(44074917-44074969)
chr4 (123-167)||(51536932-51536976)
chr4 (123-167)||(53291515-53291559)
chr4 (124-176)||(53697959-53698011)
chr4 (123-167)||(55656086-55656130)
[»] chr5 (35 HSPs)
chr5 (123-176)||(19058982-19059035)
chr5 (126-176)||(42455375-42455425)
chr5 (123-200)||(20945869-20945946)
chr5 (123-176)||(29096286-29096339)
chr5 (123-176)||(30403814-30403867)
chr5 (128-177)||(33729841-33729890)
chr5 (123-167)||(5156970-5157014)
chr5 (123-167)||(9577366-9577410)
chr5 (123-175)||(29331308-29331360)
chr5 (123-167)||(32158392-32158436)
chr5 (123-177)||(1244705-1244759)
chr5 (127-165)||(6561973-6562011)
chr5 (123-176)||(6806618-6806671)
chr5 (127-200)||(9963456-9963529)
chr5 (123-176)||(18478067-18478120)
chr5 (123-167)||(2029106-2029150)
chr5 (123-167)||(15978655-15978699)
chr5 (123-167)||(18202071-18202115)
chr5 (124-176)||(38618660-38618712)
chr5 (123-167)||(43166742-43166786)
chr5 (124-167)||(6014852-6014895)
chr5 (123-166)||(7234850-7234893)
chr5 (133-176)||(8015899-8015942)
chr5 (123-166)||(29144216-29144259)
chr5 (124-167)||(41843731-41843774)
chr5 (139-177)||(4216809-4216847)
chr5 (126-176)||(20762345-20762395)
chr5 (123-177)||(29106016-29106070)
chr5 (123-176)||(843346-843399)
chr5 (123-176)||(36226113-36226166)
chr5 (133-166)||(40339088-40339121)
chr5 (123-167)||(6671764-6671808)
chr5 (123-167)||(14487634-14487678)
chr5 (123-167)||(23925616-23925660)
chr5 (125-177)||(33800956-33801008)
[»] chr2 (38 HSPs)
chr2 (123-176)||(34018048-34018101)
chr2 (123-166)||(7086327-7086370)
chr2 (123-177)||(3179387-3179441)
chr2 (133-177)||(2557571-2557615)
chr2 (123-167)||(22538612-22538656)
chr2 (125-176)||(8234772-8234823)
chr2 (123-165)||(45523740-45523782)
chr2 (123-176)||(580761-580814)
chr2 (123-176)||(11133140-11133193)
chr2 (123-176)||(14483635-14483688)
chr2 (123-176)||(17154713-17154766)
chr2 (123-176)||(29664667-29664720)
chr2 (123-176)||(44422171-44422224)
chr2 (123-167)||(11190077-11190121)
chr2 (123-167)||(19905633-19905677)
chr2 (124-176)||(20122454-20122506)
chr2 (123-167)||(31956940-31956984)
chr2 (127-167)||(41699450-41699490)
chr2 (125-176)||(3037602-3037653)
chr2 (123-166)||(34620592-34620635)
chr2 (134-177)||(36072559-36072602)
chr2 (123-166)||(41195920-41195963)
chr2 (124-166)||(2114414-2114456)
chr2 (126-176)||(9796961-9797011)
chr2 (135-177)||(30474185-30474227)
chr2 (126-167)||(3021070-3021111)
chr2 (126-167)||(11837062-11837103)
chr2 (130-167)||(14879201-14879238)
chr2 (134-167)||(20533830-20533863)
chr2 (126-167)||(31564162-31564203)
chr2 (133-166)||(44721692-44721725)
chr2 (123-167)||(1836661-1836705)
chr2 (123-167)||(9547105-9547149)
chr2 (136-176)||(17239965-17240005)
chr2 (126-166)||(18209922-18209962)
chr2 (123-167)||(26806167-26806211)
chr2 (124-176)||(33001532-33001584)
chr2 (133-173)||(44950973-44951013)
[»] chr1 (37 HSPs)
chr1 (123-176)||(19793590-19793643)
chr1 (123-176)||(37733819-37733872)
chr1 (123-166)||(46116152-46116195)
chr1 (123-177)||(21884638-21884692)
chr1 (123-192)||(47939177-47939246)
chr1 (133-167)||(20357532-20357566)
chr1 (133-167)||(20562389-20562423)
chr1 (133-175)||(23345045-23345087)
chr1 (123-177)||(32711122-32711176)
chr1 (123-177)||(38019925-38019979)
chr1 (123-177)||(49251373-49251427)
chr1 (123-176)||(3532952-3533005)
chr1 (124-177)||(4616936-4616989)
chr1 (123-176)||(9527490-9527543)
chr1 (123-176)||(11405520-11405573)
chr1 (123-176)||(15774290-15774343)
chr1 (123-176)||(34560316-34560369)
chr1 (123-176)||(35593827-35593880)
chr1 (123-176)||(37490954-37491007)
chr1 (123-176)||(39433422-39433475)
chr1 (123-167)||(3276432-3276476)
chr1 (123-167)||(11907277-11907321)
chr1 (123-167)||(39994826-39994870)
chr1 (124-166)||(22346493-22346535)
chr1 (125-167)||(30632364-30632406)
chr1 (139-176)||(6014512-6014549)
chr1 (123-176)||(15368869-15368922)
chr1 (123-176)||(17064245-17064298)
chr1 (123-176)||(42832011-42832064)
chr1 (123-176)||(43555852-43555905)
chr1 (124-176)||(4354084-4354136)
chr1 (123-167)||(4429460-4429504)
chr1 (123-167)||(8364386-8364430)
chr1 (123-167)||(9590323-9590367)
chr1 (139-167)||(29441985-29442013)
chr1 (123-167)||(48110602-48110646)
chr1 (123-167)||(50755417-50755461)
[»] chr7 (39 HSPs)
chr7 (124-176)||(8214174-8214226)
chr7 (123-177)||(22965936-22965990)
chr7 (123-200)||(2366397-2366474)
chr7 (123-176)||(14102525-14102578)
chr7 (123-176)||(14412542-14412595)
chr7 (123-176)||(34948170-34948223)
chr7 (123-176)||(47403566-47403619)
chr7 (126-176)||(21285334-21285384)
chr7 (127-177)||(30644232-30644282)
chr7 (123-176)||(29658250-29658303)
chr7 (124-177)||(29710080-29710133)
chr7 (123-176)||(33202532-33202585)
chr7 (123-176)||(38451927-38451980)
chr7 (123-167)||(25086928-25086972)
chr7 (123-167)||(47552286-47552330)
chr7 (123-166)||(14967611-14967654)
chr7 (123-166)||(15397087-15397130)
chr7 (123-166)||(30604398-30604441)
chr7 (123-166)||(44843765-44843808)
chr7 (134-176)||(8724444-8724486)
chr7 (141-191)||(27957594-27957643)
chr7 (133-167)||(38792285-38792319)
chr7 (124-166)||(45198077-45198119)
chr7 (123-176)||(4169140-4169193)
chr7 (123-176)||(22047584-22047637)
chr7 (123-176)||(22706006-22706059)
chr7 (123-176)||(27907874-27907927)
chr7 (123-176)||(38025405-38025458)
chr7 (123-176)||(42286388-42286441)
chr7 (127-176)||(42887218-42887267)
chr7 (134-167)||(43902525-43902558)
chr7 (123-167)||(2261462-2261506)
chr7 (123-167)||(5787534-5787578)
chr7 (135-167)||(7908782-7908814)
chr7 (123-167)||(17900857-17900901)
chr7 (123-167)||(21925548-21925592)
chr7 (128-176)||(22741269-22741317)
chr7 (123-167)||(31279297-31279341)
chr7 (123-167)||(46337845-46337889)
[»] chr3 (46 HSPs)
chr3 (124-167)||(28206516-28206559)
chr3 (123-177)||(43566774-43566828)
chr3 (123-176)||(33206821-33206874)
chr3 (123-176)||(34344756-34344809)
chr3 (123-176)||(42832040-42832093)
chr3 (123-176)||(45713544-45713597)
chr3 (123-176)||(46328902-46328955)
chr3 (123-176)||(50144584-50144637)
chr3 (123-167)||(17439943-17439987)
chr3 (123-167)||(30157075-30157119)
chr3 (123-167)||(48821037-48821081)
chr3 (134-177)||(16006495-16006538)
chr3 (128-167)||(49019256-49019295)
chr3 (123-177)||(43774248-43774302)
chr3 (125-166)||(13874814-13874855)
chr3 (123-176)||(14417932-14417985)
chr3 (126-167)||(24751513-24751554)
chr3 (134-190)||(20623766-20623822)
chr3 (127-167)||(36256661-36256701)
chr3 (123-167)||(47191446-47191490)
chr3 (123-167)||(47427796-47427840)
chr3 (124-167)||(8175833-8175876)
chr3 (124-167)||(42270992-42271035)
chr3 (123-166)||(54983683-54983726)
chr3 (123-165)||(19540420-19540462)
chr3 (123-165)||(20244209-20244251)
chr3 (126-176)||(35483333-35483383)
chr3 (134-168)||(38682247-38682281)
chr3 (123-177)||(39492884-39492938)
chr3 (123-176)||(13539942-13539995)
chr3 (123-176)||(13616053-13616105)
chr3 (134-167)||(32508783-32508816)
chr3 (134-167)||(48173359-48173392)
chr3 (123-176)||(50724431-50724484)
chr3 (123-176)||(50788364-50788417)
chr3 (123-167)||(363016-363060)
chr3 (140-176)||(2732727-2732763)
chr3 (123-167)||(18201455-18201499)
chr3 (123-167)||(30058810-30058854)
chr3 (123-167)||(31698606-31698650)
chr3 (134-166)||(32876105-32876137)
chr3 (123-167)||(37059520-37059564)
chr3 (144-192)||(37279675-37279723)
chr3 (123-167)||(38176127-38176171)
chr3 (123-167)||(40786353-40786397)
chr3 (123-167)||(49639101-49639145)
[»] chr6 (26 HSPs)
chr6 (123-177)||(5134412-5134466)
chr6 (123-176)||(12127887-12127940)
chr6 (123-176)||(18904661-18904714)
chr6 (123-176)||(19165414-19165467)
chr6 (123-176)||(25020506-25020559)
chr6 (123-167)||(5678195-5678239)
chr6 (123-166)||(34396157-34396200)
chr6 (123-176)||(6530182-6530235)
chr6 (123-164)||(9438378-9438419)
chr6 (123-176)||(9491713-9491766)
chr6 (123-176)||(12089161-12089214)
chr6 (123-176)||(22389728-22389781)
chr6 (123-176)||(30566122-30566175)
chr6 (126-167)||(35190836-35190877)
chr6 (123-167)||(22501092-22501136)
chr6 (135-198)||(15288945-15289008)
chr6 (124-167)||(31761227-31761270)
chr6 (126-176)||(16251504-16251554)
chr6 (134-176)||(22983644-22983686)
chr6 (134-176)||(23804722-23804764)
chr6 (123-176)||(3448416-3448469)
chr6 (133-166)||(6270597-6270630)
chr6 (134-167)||(7709957-7709990)
chr6 (137-166)||(15126316-15126345)
chr6 (134-167)||(32057107-32057140)
chr6 (124-176)||(7720482-7720534)
[»] chr8 (35 HSPs)
chr8 (123-176)||(36359696-36359749)
chr8 (123-167)||(24074579-24074623)
chr8 (123-167)||(28378886-28378930)
chr8 (123-167)||(40249856-40249900)
chr8 (134-176)||(5184876-5184918)
chr8 (134-176)||(15042354-15042396)
chr8 (123-177)||(27558849-27558903)
chr8 (124-166)||(30542838-30542880)
chr8 (123-177)||(43874955-43875009)
chr8 (123-176)||(4798519-4798572)
chr8 (123-176)||(10184779-10184832)
chr8 (123-176)||(23239188-23239241)
chr8 (123-176)||(43468683-43468736)
chr8 (123-167)||(7649601-7649645)
chr8 (123-167)||(14683949-14683993)
chr8 (123-167)||(25689366-25689410)
chr8 (123-166)||(37154588-37154631)
chr8 (133-167)||(30461609-30461643)
chr8 (123-165)||(31373395-31373437)
chr8 (134-176)||(33570418-33570460)
chr8 (126-176)||(34073220-34073270)
chr8 (134-176)||(39484359-39484401)
chr8 (123-176)||(3379626-3379679)
chr8 (134-167)||(13702341-13702374)
chr8 (123-176)||(14684194-14684247)
chr8 (134-167)||(44070357-44070390)
chr8 (123-159)||(6447294-6447330)
chr8 (123-167)||(9525030-9525074)
chr8 (123-167)||(10970339-10970383)
chr8 (123-167)||(23857301-23857345)
chr8 (123-167)||(24608461-24608505)
chr8 (123-159)||(34632063-34632099)
chr8 (123-167)||(41125412-41125455)
chr8 (144-200)||(42761864-42761920)
chr8 (123-167)||(44360915-44360959)
[»] scaffold0533 (1 HSPs)
scaffold0533 (123-175)||(9391-9443)
[»] scaffold1990 (1 HSPs)
scaffold1990 (133-200)||(934-1001)
[»] scaffold0092 (1 HSPs)
scaffold0092 (133-200)||(47305-47372)
[»] scaffold1086 (1 HSPs)
scaffold1086 (123-176)||(2552-2605)
[»] scaffold0044 (1 HSPs)
scaffold0044 (123-167)||(49893-49937)
[»] scaffold0039 (1 HSPs)
scaffold0039 (123-167)||(101904-101948)
[»] scaffold2098 (1 HSPs)
scaffold2098 (136-167)||(605-636)
[»] scaffold0178 (1 HSPs)
scaffold0178 (126-176)||(4387-4437)
[»] scaffold0027 (1 HSPs)
scaffold0027 (137-167)||(38615-38645)
[»] scaffold0343 (1 HSPs)
scaffold0343 (134-167)||(8633-8666)
[»] scaffold0020 (1 HSPs)
scaffold0020 (124-176)||(166660-166712)
[»] scaffold0015 (1 HSPs)
scaffold0015 (123-163)||(8679-8719)
[»] scaffold0009 (1 HSPs)
scaffold0009 (123-167)||(185490-185534)


Alignment Details
Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 200
Target Start/End: Complemental strand, 52560984 - 52560804
Alignment:
Q  17 atcatcaagatcttggatattgttcattttacttacatcaagaaactaagcaacaaacaatatttcgggtgctcaacgaagaacatgaagccnnnnnnnn 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||            
T  52560984 atcatcaagatcttggatattgttcattttacttacatcaagaaactcagcaacaaacaatatttcgggtgctcaacgacgaacatgaagcc---ttttt 52560888  T
Q  117 nnnnnngtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgc 200  Q
          ||||||||| ||||||| ||||||||||||||||||||||||||| | ||||| | |  ||||||||||  |||||||    
T  52560887 ttttttgtcaggtagtctagtggctagaattcaccttataaggtgaataagtgaagtgtatgtggttcgaaccccggcccctgc 52560804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 30295630 - 30295551
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgctt 202  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| || ||||||    ||||||||||| |||||||||    
T  30295630 gtcaggtagcctagtggctagaattcaccttctaaggtgaataagtggggtgtctggggttcgaaccccaacccctgctt 30295551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 30324532 - 30324453
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgctt 202  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| || ||||||    ||||||||||| |||||||||    
T  30324532 gtcaggtagcctagtggctagaattcaccttctaaggtgaataagtggggtgtctggggttcgaaccccaacccctgctt 30324453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 3442960 - 3442906
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||    
T  3442960 gtcaggtagtctactggttagaattcaccttataaggtgaataagtggggtgtct 3442906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 28221289 - 28221338
Alignment:
Q  127 ggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  28221289 ggtagcctagtggttagaattcaccttataaggtgaataagtggggtgtc 28221338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 17859895 - 17859851
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  17859895 gtcaggtagcctagtggctagaattcaccttataaggtgaataag 17859851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 20753103 - 20753147
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  20753103 gtcaggtagcctagtggctagaattcaccttataaggtgaataag 20753147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 49280647 - 49280691
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| |||||||||||||||||||||||||||||||||||    
T  49280647 gtcaagtagcctagtggttagaattcaccttataaggtgaataag 49280691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 34684674 - 34684631
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  34684674 tagtggttagaattcaccttataaggtgaataagtggggtgtct 34684631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 3465697 - 3465647
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  3465697 aggtagtctagtggctagaattcaccttataaggtgaataagtggggtgtc 3465647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 12856290 - 12856248
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  12856290 tagtggttagaattcaccttataaggtgaataagtggggtgtc 12856248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 38433428 - 38433374
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||||||||  |||| ||||||||||||||||||||||||||||| || ||||||    
T  38433428 gtcaggtagcttagttgttagaattcaccttataaggtgaataagtggggtgtct 38433374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 534745 - 534786
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  534745 aggtagcctaatggttagaattcaccttataaggtgaataag 534786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 548865 - 548942
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgc 200  Q
    ||||||||| ||||| | || |||||||||||||||||||||||| || ||||||   |||||||||||  |||||||    
T  548865 gtcaggtagcctagtagctaaaattcaccttataaggtgaataagtggggtgtctgagtttcgaaccccggcccctgc 548942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 27584039 - 27584080
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  27584039 aggtagcctagtggctagaattcaccttataaggtgaataag 27584080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 30152231 - 30152178
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  30152231 gtcaggtagcctattggctagaattcaccttataaggtgaataagtggggtgtc 30152178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 31578134 - 31578081
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||| || |||||    
T  31578134 gtcaggtagcctagtggctagaattcaccttataatgtgaataagtggggtgtc 31578081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 41003150 - 41003203
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||| || |||||    
T  41003150 gtcaggtagcctagtggttagaattcatcttgtaaggtgaataagtggggtgtc 41003203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 2487404 - 2487360
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||    
T  2487404 gtcaggtagcctagtggctagaattcaccttataagatgaataag 2487360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 12820384 - 12820436
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  12820384 tcagatagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 12820436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 20266980 - 20266936
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| || |||| |||||||||||||||||||||||||||    
T  20266980 gtcaggtagcctggtggctagaattcaccttataaggtgaataag 20266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 39992947 - 39992899
Alignment:
Q  128 gtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  39992947 gtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 39992899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 41944024 - 41943980
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| |||| || |||||||||||||||||||||||||||    
T  41944024 gtcaggtagcctagcggctagaattcaccttataaggtgaataag 41943980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 54304907 - 54304951
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||    
T  54304907 gtcaggtagcctagtggctagaattcaccttataagctgaataag 54304951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 11039919 - 11039958
Alignment:
Q  128 gtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  11039919 gtagcctaatggttagaattcaccttataaggtgaataag 11039958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 15021541 - 15021498
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||| ||||||| || ||||||||||||||||||||||||    
T  15021541 tcaggtagcctagtggctataattcaccttataaggtgaataag 15021498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 19311912 - 19311873
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtga 162  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  19311912 gtcaggtagtctattggttagaattcaccttataaggtga 19311873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 22478718 - 22478761
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||    
T  22478718 gtcaggtaacctagtagttagaattcaccttataaggtgaataa 22478761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 31152625 - 31152582
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||    
T  31152625 ctagtggctagaattcaccttataaggtggataagtggagtgtc 31152582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 52743324 - 52743281
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||    
T  52743324 gtcaggtagcctagtagctagaattcaccttataaggtgaataa 52743281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 1297952 - 1297918
Alignment:
Q  141 tagaattcaccttataaggtgaataaggggagtgt 175  Q
    ||||||||||||||||||||||||||| |||||||    
T  1297952 tagaattcaccttataaggtgaataagtggagtgt 1297918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 9285637 - 9285691
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||| |||| ||||||| |||||||||||||||||||| |||||| || ||||||    
T  9285637 gtcaagtagtctagtggctagaattcaccttataaggttaataagtggggtgtct 9285691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 32885794 - 32885752
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| ||||||||||||||||||||||||||| || |||||    
T  32885794 tagtggatagaattcaccttataaggtgaataagtggggtgtc 32885752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 33944341 - 33944391
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagt 173  Q
    ||||||||| ||||||| |||||||||||||||||  |||||||| |||||    
T  33944341 gtcaggtagcctagtggctagaattcaccttataaaatgaataagtggagt 33944391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 8941573 - 8941614
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgt 175  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  8941573 tagtggttagaattcaccttataagacgaataagtggagtgt 8941614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 9924973 - 9924920
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| || |||||||| || |||||||||||| ||||||||    
T  9924973 gtcaggtagtctagtggataaaattcaccatacaaggtgaataagtggagtgtc 9924920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 35451102 - 35451143
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  35451102 aggtagtctagtggctagaattcatcttataaggtgaataag 35451143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 36008381 - 36008348
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| |||||||||||||||||||||||||||    
T  36008381 tagtggctagaattcaccttataaggtgaataag 36008348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 6330915 - 6330967
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||  |||||| || |||||||||||||||||||||||| || |||||    
T  6330915 tcaggtagattagtggctaaaattcaccttataaggtgaataagtggggtgtc 6330967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 13073133 - 13073177
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||| | |||||||||||||||||||| ||||||    
T  13073133 gtcaggtagcctagtagctagaattcaccttataaggttaataag 13073177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 22158364 - 22158320
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| |||||||  ||||||||||||||||||||||||||    
T  22158364 gtcagctagtctagtggcaagaattcaccttataaggtgaataag 22158320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 44074969 - 44074917
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||| ||| ||| || |||||||||||||||||||||||| || |||||    
T  44074969 tcaggtagcctaatggctaaaattcaccttataaggtgaataagtggggtgtc 44074917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 51536976 - 51536932
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  51536976 gtcaggtagtctagtggctagaattcacctgataagatgaataag 51536932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 53291559 - 53291515
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||  |||||  |||||||||||||||||||||||||||    
T  53291559 gtcaggtagcttagtgcatagaattcaccttataaggtgaataag 53291515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 53697959 - 53698011
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||| ||||| | |||||||||||||||||||| |||||| || |||||    
T  53697959 tcaggtagcctagttgctagaattcaccttataaggtaaataagtggggtgtc 53698011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 55656086 - 55656130
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||  ||||||| ||||||||| |||||||||||||||||    
T  55656086 gtcaggtaatctagtggctagaattcatcttataaggtgaataag 55656130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 19058982 - 19059035
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  19058982 gtcaggtaggctagtggctagaattcaccttataaggtgaataagtggggtgtc 19059035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 42455375 - 42455425
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  42455375 aggtagcctagtggctagaattcaccttataaggtgaataagtggagtgtc 42455425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 20945869 - 20945946
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgc 200  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| || |||||   ||||||||||||  |||||||    
T  20945869 gtcaggtaatctagtggctagaattcaccttataaggtgaataagtggggtgtccggatttcgaaccccggcccctgc 20945946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 29096286 - 29096339
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  29096286 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 29096339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 30403867 - 30403814
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||  |||||||||||||||||||||||||||||||||| || |||||    
T  30403867 gtcaggtagcttagtggttagaattcaccttataaggtgaataagtggggtgtc 30403814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 33729890 - 33729841
Alignment:
Q  128 gtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||| ||||||||||||||||||||||||||||||||||| || ||||||    
T  33729890 gtagcctagtggttagaattcaccttataaggtgaataagtggggtgtct 33729841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 5157014 - 5156970
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  5157014 gtcaggtagtctagtggctagaattcaccttataaggtgaataag 5156970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 9577410 - 9577366
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  9577410 gtcaggtagcctagtggctagaattcaccttataaggtgaataag 9577366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 29331360 - 29331308
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgt 175  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||| |||||||    
T  29331360 gtcaggtagcctagtggctagaattcaccttataagatgaataagtggagtgt 29331308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 32158392 - 32158436
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  32158392 gtcaggtagcctagtggctagaattcaccttataaggtgaataag 32158436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 1244705 - 1244759
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| || ||||||    
T  1244705 gtcaggtaacctagtggctagaattcaccttataaggtgaataagtggggtgtct 1244759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 6562011 - 6561973
Alignment:
Q  127 ggtaggctagtggttagaattcaccttataaggtgaata 165  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  6562011 ggtagcctagtggttagaattcaccttataaggtgaata 6561973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 6806618 - 6806671
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||| ||| ||||||||||||||||| ||||||||| ||||||||    
T  6806618 gtcaggtagcctaatggctagaattcaccttataatgtgaataagtggagtgtc 6806671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 9963529 - 9963456
Alignment:
Q  127 ggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgc 200  Q
    ||||| |||||||||||||||||| |||||||||||||||| || | |||   | ||||||||||| |||||||    
T  9963529 ggtagcctagtggttagaattcactttataaggtgaataagtggggggtccgaagttcgaaccccaacccctgc 9963456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 18478120 - 18478067
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||| || |||||    
T  18478120 gtcaggtagcctaatggctagaattcaccttataaggtgaataagtggggtgtc 18478067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 2029106 - 2029150
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||    
T  2029106 gtcagatagcctagtggctagaattcaccttataaggtgaataag 2029150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 15978655 - 15978699
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||    
T  15978655 gtcaagtagcctagtggttaaaattcaccttataaggtgaataag 15978699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 18202071 - 18202115
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||    
T  18202071 gtcaggtagcctagtggctataattcaccttataaggtgaataag 18202115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 38618660 - 38618712
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||| ||||| | ||||||||||||||||||||||||||| || |||||    
T  38618660 tcaggtagcctagttgctagaattcaccttataaggtgaataagtggggtgtc 38618712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 43166786 - 43166742
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||    
T  43166786 gtcagatagcctagtggctagaattcaccttataaggtgaataag 43166742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 6014895 - 6014852
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||    
T  6014895 tcaggtagcctagtggctagaattcaccttataagatgaataag 6014852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 7234850 - 7234893
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||    
T  7234850 gtcaagtagactagtggctagaattcaccttataaggtgaataa 7234893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 8015942 - 8015899
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||| ||||||||||||||||||||||||||| || |||||    
T  8015942 ctagtgggtagaattcaccttataaggtgaataagtggggtgtc 8015899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 29144259 - 29144216
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||    
T  29144259 gtcaggtaatctagtggttagaattcaccttataacgtgaataa 29144216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 41843774 - 41843731
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||| ||| | |||||||||||||||||||||||||||||    
T  41843774 tcaggtagcctacttgttagaattcaccttataaggtgaataag 41843731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 4216809 - 4216847
Alignment:
Q  139 gttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  4216809 gttagaattcaccttataaggtgaataagtggggtgtct 4216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 20762395 - 20762345
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| ||||||  ||||||||||||||||||||||||||| || |||||    
T  20762395 aggtagtctagtgactagaattcaccttataaggtgaataagtggggtgtc 20762345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 29106016 - 29106070
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||| || |||| ||||||| ||||||||||||||||||| || ||||||    
T  29106016 gtcaggtagtctggtggctagaattaaccttataaggtgaataagtggggtgtct 29106070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 843346 - 843399
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||  |||||||||||||||| || |||||    
T  843346 gtcaggtagcctagtggctagaattcaatttataaggtgaataagtggggtgtc 843399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 36226113 - 36226166
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| || ||||||||||||||| |||||||  ||||||||    
T  36226113 gtcaggtagcctagtggctataattcaccttataagatgaataaatggagtgtc 36226166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 40339088 - 40339121
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||| ||||||||||||||||||||||||||    
T  40339088 ctagtggctagaattcaccttataaggtgaataa 40339121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 6671764 - 6671808
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||  ||||||| |||||||||||||||||| ||||||||    
T  6671764 gtcaggtaatctagtggctagaattcaccttataagatgaataag 6671808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 14487678 - 14487634
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| ||| ||| |||||||||||||||||||||||||||    
T  14487678 gtcaagtagtctaatggctagaattcaccttataaggtgaataag 14487634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 23925660 - 23925616
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| ||||||| |||||||||||||||||| ||||||||    
T  23925660 gtcaagtagtctagtggctagaattcaccttataagatgaataag 23925616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 33801008 - 33800956
Alignment:
Q  125 caggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||| ||||| | ||||| ||||||||||||||||||||| || ||||||    
T  33801008 caggtagcctagtagctagaactcaccttataaggtgaataagtggggtgtct 33800956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 34018048 - 34018101
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  34018048 gtcaggtagcctagtggttagaattcaccttataaggtgaataagtggggtgtc 34018101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 7086370 - 7086327
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  7086370 gtcaggtagtctagtggttagaattcaccttataaggtgaataa 7086327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 3179441 - 3179387
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || ||||||    
T  3179441 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtct 3179387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 2557571 - 2557615
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  2557571 ctagtggctagaattcaccttataaggtgaataagtggagtgtct 2557615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 22538656 - 22538612
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  22538656 gtcaggtagcctagtggctagaattcaccttataaggtgaataag 22538612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 8234772 - 8234823
Alignment:
Q  125 caggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  8234772 caggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 8234823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 45523782 - 45523740
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaata 165  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  45523782 gtcaggtagtttagtggttagaattcaccttataaggtgaata 45523740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 580761 - 580814
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||| || |||||    
T  580761 gtcaggtagcctagtggctagaattcatcttataaggtgaataagtggggtgtc 580814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 11133193 - 11133140
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| || |||||    
T  11133193 gtcaggtaacctagtggctagaattcaccttataaggtgaataagtggggtgtc 11133140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 14483635 - 14483688
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||| || |||||    
T  14483635 gtcaggtagtctattggttagaattcaccttataagatgaataagtggggtgtc 14483688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 17154766 - 17154713
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||| || |||||    
T  17154766 gtcaggtagcctagtggctagaactcaccttataaggtgaataagtggggtgtc 17154713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 29664720 - 29664667
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||| || |||||    
T  29664720 gtcaggtagtctagtggctagaattcaccttataagatgaataagtggggtgtc 29664667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 44422224 - 44422171
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||| || |||||    
T  44422224 gtcaggtagcctagtggttagaatttaccttataaagtgaataagtggggtgtc 44422171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 11190077 - 11190121
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| ||||||||| |||||||||||||||||    
T  11190077 gtcaggtagcctagtggctagaattcatcttataaggtgaataag 11190121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 19905633 - 19905677
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||    
T  19905633 gtcaggtagcctaatggctagaattcaccttataaggtgaataag 19905677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 20122454 - 20122506
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||| ||||||| |||||||||||||||||| |||||||| || |||||    
T  20122454 tcaggtagcctagtggctagaattcaccttataagatgaataagtggcgtgtc 20122506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 31956984 - 31956940
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| || |||||||||||||||||||||| |||||||||    
T  31956984 gtcaggtagcctggtggttagaattcaccttataacgtgaataag 31956940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 41699490 - 41699450
Alignment:
Q  127 ggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  41699490 ggtagtctagtggctagaattcaccttataaggtgaataag 41699450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 3037602 - 3037653
Alignment:
Q  125 caggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||| ||||||  ||||||||||||||||||||||||||| || |||||    
T  3037602 caggtagcctagtgcctagaattcaccttataaggtgaataagtggggtgtc 3037653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 34620635 - 34620592
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||    
T  34620635 gtcaagtagtctagtggctagaattcaccttataaggtgaataa 34620592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 36072559 - 36072602
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||    
T  36072559 tagtggctagaatttaccttataaggtgaataagtggagtgtct 36072602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 41195920 - 41195963
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||    
T  41195920 gtcaggtagcctagtggctagaattcaccttattaggtgaataa 41195963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 2114414 - 2114456
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    |||||||| | ||||| ||||||||||||||||||||||||||    
T  2114414 tcaggtagtccagtggctagaattcaccttataaggtgaataa 2114456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 9797011 - 9796961
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||||||  |||||||||||||||||| |||||||| || |||||    
T  9797011 aggtaggctagtgtctagaattcaccttataagatgaataagtggggtgtc 9796961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 30474185 - 30474227
Alignment:
Q  135 agtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||| ||||||||||||||||||||||||||| || ||||||    
T  30474185 agtggctagaattcaccttataaggtgaataagtggggtgtct 30474227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 3021070 - 3021111
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  3021070 aggtagcctagtggctagaattcatcttataaggtgaataag 3021111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 11837103 - 11837062
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| ||||||| |||||||||| ||||||||||||||||    
T  11837103 aggtagcctagtggctagaattcactttataaggtgaataag 11837062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 14879238 - 14879201
Alignment:
Q  130 aggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||| | |||||||||||||||||||||||||||    
T  14879238 aggctagttgctagaattcaccttataaggtgaataag 14879201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 20533863 - 20533830
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||||||| |||||||||||||||||||    
T  20533863 tagtggttagaatttaccttataaggtgaataag 20533830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 31564203 - 31564162
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| ||||||| ||||||||| |||||||||||||||||    
T  31564203 aggtagtctagtggctagaattcatcttataaggtgaataag 31564162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 44721692 - 44721725
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||| ||||||||||||||||||||||||||    
T  44721692 ctagtggctagaattcaccttataaggtgaataa 44721725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 1836705 - 1836661
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| ||||||| |||||||||||||||| ||||||||||    
T  1836705 gtcagatagcctagtggctagaattcaccttatatggtgaataag 1836661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 9547105 - 9547149
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||    
T  9547105 gtcaggtagtctattggctagaattcaccttataagatgaataag 9547149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 17240005 - 17239965
Alignment:
Q  136 gtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||||||||||||||||| |||||||| || |||||    
T  17240005 gtggttagaattcaccttataagatgaataagtggggtgtc 17239965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 18209922 - 18209962
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    |||||| ||||||| || |||||||||||||||||||||||    
T  18209922 aggtagcctagtggctataattcaccttataaggtgaataa 18209962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 26806167 - 26806211
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||  ||||||||| ||||||| ||||||||||||||||    
T  26806167 gtcaggtagtttagtggttataattcactttataaggtgaataag 26806211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 33001532 - 33001584
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||| ||||| | |||||||||||||||||| |||||||| || |||||    
T  33001532 tcaggtagcctagtagctagaattcaccttataagatgaataagtggggtgtc 33001584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 44951013 - 44950973
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataaggggagt 173  Q
    ||||||| |||||||||||||||||| |||||||| |||||    
T  44951013 ctagtggctagaattcaccttataagatgaataagtggagt 44950973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 19793643 - 19793590
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  19793643 gtcaggtagcctagtggttagaattcaccttataaggtgaataagtggggtgtc 19793590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 37733872 - 37733819
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  37733872 gtcaggtagcctagtggttagaattcaccttataaggtgaataagtggggtgtc 37733819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 46116152 - 46116195
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  46116152 gtcaggtagcctagtggttagaattcaccttataaggtgaataa 46116195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 21884692 - 21884638
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| || ||||||    
T  21884692 gtcatgtagtctagtggttagaattcaccttataaggtgaataagtggggtgtct 21884638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 47939177 - 47939246
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaacccca 192  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| || |||||   | |||||||||||    
T  47939177 gtcaggtagcctagtggttagaattcacctaataaggtgaataagtggggtgtccggagttcgaacccca 47939246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 20357566 - 20357532
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||||||||||||||||||||||||||||    
T  20357566 ctagtggttagaattcaccttataaggtgaataag 20357532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 20562389 - 20562423
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||||||||||||||||||||||||||||    
T  20562389 ctagtggttagaattcaccttataaggtgaataag 20562423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 23345045 - 23345087
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataaggggagtgt 175  Q
    ||||||| ||||||||||||||||||||||||||| |||||||    
T  23345045 ctagtggctagaattcaccttataaggtgaataagtggagtgt 23345087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 32711122 - 32711176
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||| || ||||||    
T  32711122 gtcagatagtctagtggctagaattcaccttataaggtgaataagtggggtgtct 32711176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 38019925 - 38019979
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||| || ||||||    
T  38019925 gtcaggtagcctagtggctagaattcactttataaggtgaataagtggggtgtct 38019979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 49251373 - 49251427
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| || ||||||    
T  49251373 gtcaggtaacctagtggttagaattcacattataaggtgaataagtggggtgtct 49251427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 3532952 - 3533005
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||| || |||||    
T  3532952 gtcaggtagcctagtagctagaattcaccttataaggtgaataagtggggtgtc 3533005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 4616989 - 4616936
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||||||| ||||||| |||||||||| |||||||||||||||| || ||||||    
T  4616989 tcaggtagtctagtggctagaattcactttataaggtgaataagtggggtgtct 4616936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 9527543 - 9527490
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||| || |||||    
T  9527543 gtcaggtagtctagtggctagaattcaccttataagatgaataagtggggtgtc 9527490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 11405573 - 11405520
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||  |||||| ||||||||||||||||||||||||||| || |||||    
T  11405573 gtcaggtagcttagtggctagaattcaccttataaggtgaataagtggggtgtc 11405520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 15774290 - 15774343
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||  |||||| ||||||||||||||||||||||||||| || |||||    
T  15774290 gtcaggtagcttagtggctagaattcaccttataaggtgaataagtggggtgtc 15774343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 34560316 - 34560369
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||| || |||||    
T  34560316 gtcaggtagtctagtgactagaattcaccttataaggtgaataagtggggtgtc 34560369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 35593880 - 35593827
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| |||| || ||||||||||||||||||||||||||| || |||||    
T  35593880 gtcaggtagcctagcggctagaattcaccttataaggtgaataagtggggtgtc 35593827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 37491007 - 37490954
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||| || |||||    
T  37491007 gtcaggtagcctagtggctagaattcaccttataagatgaataagcggggtgtc 37490954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 39433475 - 39433422
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| || |||||    
T  39433475 gtcaggcagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 39433422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 3276432 - 3276476
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||    
T  3276432 gtcaggtagcctagtggctagaattcaccttgtaaggtgaataag 3276476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 11907277 - 11907321
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||    
T  11907277 gtcaggtagcctagtggttagaattcaccttataatatgaataag 11907321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 39994826 - 39994870
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||    
T  39994826 gtcagatagcctagtggctagaattcaccttataaggtgaataag 39994870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 22346535 - 22346493
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    |||||||| ||||||| |||| |||||||||||||||||||||    
T  22346535 tcaggtagcctagtggctagagttcaccttataaggtgaataa 22346493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 30632364 - 30632406
Alignment:
Q  125 caggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||| || ||||||||||||||||||||||| ||||||||    
T  30632364 caggtagtctggtggttagaattcaccttataagatgaataag 30632406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 6014512 - 6014549
Alignment:
Q  139 gttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||||||||||||||||||||||| || |||||    
T  6014512 gttagaattcaccttataaggtgaataagtggggtgtc 6014549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 15368922 - 15368869
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||||||||||  |||||||| || |||||    
T  15368922 gtcaggtagcctagtggctagaattcaccttataaaatgaataagtggggtgtc 15368869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 17064245 - 17064298
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||| ||| ||||||||||||||||| ||||||||| || |||||    
T  17064245 gtcaggtagcctaatggatagaattcaccttataacgtgaataagtggggtgtc 17064298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 42832064 - 42832011
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||| ||| ||||||  ||||||||||||||||||||||||||| || |||||    
T  42832064 gtcagatagcctagtgactagaattcaccttataaggtgaataagtggggtgtc 42832011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 43555852 - 43555905
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||| ||||||||||||| |||||| || |||||    
T  43555852 gtcaggtagtctagtggctagaatccaccttataaggtaaataagtggggtgtc 43555905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 4354084 - 4354136
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||| || |||| |||||||||| |||||||||||||||| || |||||    
T  4354084 tcaggtagcctggtggctagaattcactttataaggtgaataagtggggtgtc 4354136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 4429460 - 4429504
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| ||||||| |||||||||||||||||| ||||||||    
T  4429460 gtcagatagtctagtggctagaattcaccttataagatgaataag 4429504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 8364386 - 8364430
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||  |||||||||||||| ||||||||||||    
T  8364386 gtcaggtagcctagtgactagaattcaccttaaaaggtgaataag 8364430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 9590323 - 9590367
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| |||||||||||||||||||||||||| | ||||||    
T  9590323 gtcagatagtctagtggttagaattcaccttataagataaataag 9590367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 167
Target Start/End: Original strand, 29441985 - 29442013
Alignment:
Q  139 gttagaattcaccttataaggtgaataag 167  Q
    |||||||||||||||||||||||||||||    
T  29441985 gttagaattcaccttataaggtgaataag 29442013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 48110646 - 48110602
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||| ||||||||||||| ||||||||    
T  48110646 gtcaggtagcctagtggctagatttcaccttataagatgaataag 48110602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 50755461 - 50755417
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| ||||||| |||||||||| ||||||||||||||||    
T  50755461 gtcaagtagcctagtggctagaattcactttataaggtgaataag 50755417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 8214226 - 8214174
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  8214226 tcaggtagtctagtggttagaattcaccttataaggtgaataagtggggtgtc 8214174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 22965936 - 22965990
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| || ||||||    
T  22965936 gtcatgtagtctagtggttagaattcaccttataaggtgaataagtggggtgtct 22965990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 2366474 - 2366397
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgc 200  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||| || ||||||  | ||||||||||  |||||||    
T  2366474 gtcaggtagcctaatggctagaattcaccttataaggtgaataagtggggtgtctagagttcgaaccccgacccctgc 2366397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 14102578 - 14102525
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| || |||||    
T  14102578 gtcaggtagcctagtagttagaattcaccttataaggtgaataagtggggtgtc 14102525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 14412595 - 14412542
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| || |||||    
T  14412595 gtcaggtagcctagtagttagaattcaccttataaggtgaataagtggggtgtc 14412542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 34948223 - 34948170
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  34948223 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 34948170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 47403566 - 47403619
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||  |||||| ||||||||||||||||||||||||||| ||||||||    
T  47403566 gtcaggtagcttagtggctagaattcaccttataaggtgaataagtggagtgtc 47403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 21285334 - 21285384
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  21285334 aggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 21285384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 30644282 - 30644232
Alignment:
Q  127 ggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||| ||||||| ||||||||||||||||||||||||||| || ||||||    
T  30644282 ggtagactagtggctagaattcaccttataaggtgaataagtggggtgtct 30644232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 29658250 - 29658303
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  29658250 gtcaagtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 29658303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 29710080 - 29710133
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||  |||||| |||||||||||||||||| |||||||| |||||||||    
T  29710080 tcaggtagcttagtggctagaattcaccttataagatgaataagtggagtgtct 29710133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 33202532 - 33202585
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||| || |||||    
T  33202532 gtcaggtagcctagtggctagaattcaccttataagatgaataagtggggtgtc 33202585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 38451980 - 38451927
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||| || |||||    
T  38451980 gtcaggtagtctagtggctagaattcaccttataatgtgaataagtggggtgtc 38451927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 25086928 - 25086972
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||  ||| ||||||||||||||||||||||||||||||    
T  25086928 gtcaggtagcatagcggttagaattcaccttataaggtgaataag 25086972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 47552330 - 47552286
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| || |||| |||||||||||||||||||||||||||    
T  47552330 gtcaggtagcctggtggctagaattcaccttataaggtgaataag 47552286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 14967611 - 14967654
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||    
T  14967611 gtcaggtagtctagtggctagaattcaccttataagttgaataa 14967654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 15397087 - 15397130
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||    
T  15397087 gtcaggtagtctagtggctagaattcaccttataagttgaataa 15397130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 30604398 - 30604441
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||    
T  30604398 gtcagatagtctagtggctagaattcaccttataaggtgaataa 30604441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 44843808 - 44843765
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||    
T  44843808 gtcagatagtctagtggttagaattcaccttataagatgaataa 44843765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 8724486 - 8724444
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||| |||||||||||||||||||||||||||| || |||||    
T  8724486 tagtgattagaattcaccttataaggtgaataagtggggtgtc 8724444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 27957594 - 27957643
Alignment:
Q  141 tagaattcaccttataaggtgaataaggggagtgtctttatttcgaacccc 191  Q
    |||||||||||||||||||||||||||||| |||||   ||||||||||||    
T  27957594 tagaattcaccttataaggtgaataagggg-gtgtccggatttcgaacccc 27957643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 38792319 - 38792285
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||| |||||||||||||||||||||||||||    
T  38792319 ctagtggctagaattcaccttataaggtgaataag 38792285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 45198077 - 45198119
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||    
T  45198077 tcaggtagtctaatggctagaattcaccttataaggtgaataa 45198119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 4169193 - 4169140
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||  ||||||| |||||||||| |||||||||||||||| || |||||    
T  4169193 gtcaggtaacctagtggctagaattcactttataaggtgaataagtggggtgtc 4169140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 22047637 - 22047584
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||  |||||| ||||||||| ||||||||||||||||| || |||||    
T  22047637 gtcaggtagcttagtggctagaattcatcttataaggtgaataagtggggtgtc 22047584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 22706006 - 22706059
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||| | ||||||||| ||||||||||||||||| || |||||    
T  22706006 gtcaggtagcctagtagctagaattcatcttataaggtgaataagtggggtgtc 22706059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 27907874 - 27907927
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| || ||||||||||||||| |||||||| || |||||    
T  27907874 gtcaggtagcctagtggctaaaattcaccttataagatgaataagtggggtgtc 27907927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 38025458 - 38025405
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||| |||||||||||||| |||||||| ||| ||||    
T  38025458 gtcaggtagcctagtggctaggattcaccttataagatgaataagtggaatgtc 38025405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 42286441 - 42286388
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||  || |||||||||||||||||||||||| |||||| || |||||    
T  42286441 gtcaggtagtttattggttagaattcaccttataaggtaaataagtggggtgtc 42286388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 42887267 - 42887218
Alignment:
Q  127 ggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||| ||||||| |||||||||||||||||||| |||||| || |||||    
T  42887267 ggtagtctagtggctagaattcaccttataaggtaaataagtggggtgtc 42887218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 43902525 - 43902558
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| |||||||||||||||||||||||||||    
T  43902525 tagtggctagaattcaccttataaggtgaataag 43902558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 2261462 - 2261506
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||  |||||  |||||||||||||||||||||||||||    
T  2261462 gtcaggtagcatagtgtctagaattcaccttataaggtgaataag 2261506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 5787578 - 5787534
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| ||||||  |||||||||||||||||||||||||||    
T  5787578 gtcaagtagcctagtgactagaattcaccttataaggtgaataag 5787534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 7908814 - 7908782
Alignment:
Q  135 agtggttagaattcaccttataaggtgaataag 167  Q
    ||||| |||||||||||||||||||||||||||    
T  7908814 agtggctagaattcaccttataaggtgaataag 7908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 17900857 - 17900901
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| ||||||| ||||||||||||||||||| |||||||    
T  17900857 gtcaagtagcctagtggctagaattcaccttataaggagaataag 17900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 21925592 - 21925548
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| ||||||| ||||||||| |||||||||||||||||    
T  21925592 gtcagatagcctagtggctagaattcatcttataaggtgaataag 21925548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 22741317 - 22741269
Alignment:
Q  128 gtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||| ||||||| |||||||||||||||||| |||||||| || |||||    
T  22741317 gtagtctagtggctagaattcaccttataagatgaataagtggggtgtc 22741269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 31279297 - 31279341
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||  || ||| |||||||||||||||||||||||||||    
T  31279297 gtcaggtagcttattggatagaattcaccttataaggtgaataag 31279341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 46337845 - 46337889
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||  ||||||||||||||||    
T  46337845 gtcaggtagcctagtggctagaattcaatttataaggtgaataag 46337889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 28206516 - 28206559
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  28206516 tcaggtagcctagtggttagaattcaccttataaggtgaataag 28206559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 43566774 - 43566828
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || ||||||    
T  43566774 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtct 43566828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 33206874 - 33206821
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  33206874 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 33206821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 34344756 - 34344809
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  34344756 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 34344809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 42832040 - 42832093
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||    
T  42832040 gtcaggtagcctagtggctagaattcaccttataaggtgaataaatggagtgtc 42832093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 45713597 - 45713544
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| || |||||    
T  45713597 gtcaggtagcctagtagttagaattcaccttataaggtgaataagtggggtgtc 45713544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 46328902 - 46328955
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  46328902 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 46328955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 50144584 - 50144637
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  50144584 gtcagatagtctagtgggtagaattcaccttataaggtgaataagtggagtgtc 50144637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 17439943 - 17439987
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  17439943 gtcaggtagcctagtggttaaaattcaccttataaggtgaataag 17439987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 30157119 - 30157075
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| |||||||||||||||||||||||||||||||||||    
T  30157119 gtcaagtagcctagtggttagaattcaccttataaggtgaataag 30157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 48821081 - 48821037
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  48821081 gtcaggtagcctagtggttaaaattcaccttataaggtgaataag 48821037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 16006495 - 16006538
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  16006495 tagtggttagaattcaccttataaggtgaataagtggggtgtct 16006538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 49019295 - 49019256
Alignment:
Q  128 gtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  49019295 gtagtctagtggttagaattcaccttataaggtgaataag 49019256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 43774302 - 43774248
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| || ||||||    
T  43774302 gtcaggtaacctagtggctagaattcaccttataaggtgaataagtggggtgtct 43774248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 13874814 - 13874855
Alignment:
Q  125 caggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  13874814 caggtagtctagtggctagaattcaccttataaggtgaataa 13874855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 14417985 - 14417932
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||  |||||| ||||||||||||||||||||||||||| || |||||    
T  14417985 gtcaggtagcttagtggctagaattcaccttataaggtgaataagtggggtgtc 14417932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 24751554 - 24751513
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  24751554 aggtagcctagtggctagaattcaccttataaggtgaataag 24751513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 20623766 - 20623822
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccc 190  Q
    |||||| ||||||||||||||||||||||||||| || ||||| | | |||||||||    
T  20623766 tagtggctagaattcaccttataaggtgaataagtggggtgtcctgagttcgaaccc 20623822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 36256661 - 36256701
Alignment:
Q  127 ggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  36256661 ggtagcctagtggctagaattcaccttataaggtgaataag 36256701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 47191490 - 47191446
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| ||||||||| |||||||||||||||||    
T  47191490 gtcaggtagcctagtggctagaattcatcttataaggtgaataag 47191446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 47427840 - 47427796
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||  |||||||||| |||||||||||||||||||||||    
T  47427840 gtcaggtagcttagtggttagtattcaccttataaggtgaataag 47427796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 8175876 - 8175833
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||| || |||| |||||||||||||||||||||||||||    
T  8175876 tcaggtagtctggtggctagaattcaccttataaggtgaataag 8175833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 42270992 - 42271035
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||| ||||| | |||||||||||||||||||||||||||    
T  42270992 tcaggtagcctagtagctagaattcaccttataaggtgaataag 42271035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 54983683 - 54983726
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    |||||||||  |||||| ||||||||||||||||||||||||||    
T  54983683 gtcaggtagtttagtggctagaattcaccttataaggtgaataa 54983726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 19540462 - 19540420
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaata 165  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||    
T  19540462 gtcaggtaggccagtggttaaaattcaccttataagatgaata 19540420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 20244251 - 20244209
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaata 165  Q
    ||||||| | ||| |||||||||||||||||||||||||||||    
T  20244251 gtcaggtggtctaatggttagaattcaccttataaggtgaata 20244209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 35483383 - 35483333
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| ||||||| ||||||| ||||||||||||||||||| || |||||    
T  35483383 aggtagtctagtggctagaatttaccttataaggtgaataagtggggtgtc 35483333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 38682247 - 38682281
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataagg 168  Q
    ||||||||||||||||||||||||| |||||||||    
T  38682247 tagtggttagaattcaccttataagatgaataagg 38682281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 39492938 - 39492884
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||||||||  |||||||||||||||||||||||| || |||||| || ||||||    
T  39492938 gtcaggtagcttagtggttagaattcaccttataacgtaaataagtggggtgtct 39492884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 13539942 - 13539995
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||| || |||||    
T  13539942 gtcaggtagtctaatggctagaattcaccttataaggtaaataagtggggtgtc 13539995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 13616053 - 13616105
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||| || |||||    
T  13616053 gtcaggtag-ctagtggctagaattcaccttataagatgaataagtggggtgtc 13616105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 32508783 - 32508816
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| |||||||||||||||||||||||||||    
T  32508783 tagtggctagaattcaccttataaggtgaataag 32508816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 48173392 - 48173359
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| |||||||||||||||||||||||||||    
T  48173392 tagtggctagaattcaccttataaggtgaataag 48173359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 50724484 - 50724431
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||| || |||||    
T  50724484 gtcaggtagcctagtggctagaattcactttttaaggtgaataagtggggtgtc 50724431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 50788364 - 50788417
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||| || |||||    
T  50788364 gtcaggtagcctagtggctagaattcactttttaaggtgaataagtggggtgtc 50788417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 363060 - 363016
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| |||||| |||||||||||||||||| |||||||||    
T  363060 gtcagatagcctagtgattagaattcaccttataaagtgaataag 363016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 2732763 - 2732727
Alignment:
Q  140 ttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||||||||||||||||||||| || |||||    
T  2732763 ttagaattcaccttataaggtgaataagtggggtgtc 2732727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 18201455 - 18201499
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||  |||| || |||||||||||||||||||||||||||    
T  18201455 gtcaggtaacctagcggctagaattcaccttataaggtgaataag 18201499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 30058854 - 30058810
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| ||||||| |||||||||||||||||||| ||||||    
T  30058854 gtcaagtagcctagtggctagaattcaccttataaggttaataag 30058810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 31698650 - 31698606
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| ||||||| |||||||||||||||||| ||||||||    
T  31698650 gtcagatagtctagtggctagaattcaccttataagatgaataag 31698606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 32876105 - 32876137
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataa 166  Q
    |||||||||||||||||||||||| ||||||||    
T  32876105 tagtggttagaattcaccttataatgtgaataa 32876137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 37059564 - 37059520
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||  |||||||||||||||| |||||||| ||||||||    
T  37059564 gtcaggtagtttagtggttagaattcatcttataagatgaataag 37059520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 37279723 - 37279675
Alignment:
Q  144 aattcaccttataaggtgaataaggggagtgtctttatttcgaacccca 192  Q
    |||||||||||||||||||||||| || ||||||  | |||||||||||    
T  37279723 aattcaccttataaggtgaataagtggggtgtctggagttcgaacccca 37279675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 38176171 - 38176127
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||| |||||| || |||||||||||||||||||    
T  38176171 gtcaggtagcctagtagttagatttaaccttataaggtgaataag 38176127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 40786397 - 40786353
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| ||||||||||||||||||||||||| | |||||||    
T  40786397 gtcaagtagcctagtggttagaattcaccttataaagagaataag 40786353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 49639145 - 49639101
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||  ||||||| |||||||||||||| ||||||||||||    
T  49639145 gtcaggtaacctagtggctagaattcaccttacaaggtgaataag 49639101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 5134412 - 5134466
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || ||||||    
T  5134412 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtct 5134466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 12127887 - 12127940
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  12127887 gtcaggtagtctagtggctagaattcaccttataaggtgaataagtggcgtgtc 12127940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 18904661 - 18904714
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  18904661 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 18904714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 19165467 - 19165414
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  19165467 gtcaggtagactagtggctagaattcaccttataaggtgaataagtggggtgtc 19165414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 25020506 - 25020559
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  25020506 gtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 25020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 5678195 - 5678239
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  5678195 gtcaggtagtctagtggatagaattcaccttataaggtgaataag 5678239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 34396200 - 34396157
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||    
T  34396200 gtcaggtagtctattggttagaattcaccttataaggtgaataa 34396157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 6530182 - 6530235
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  6530182 gtcaagtagtctagtggctagaattcaccttataaggtgaataagtggggtgtc 6530235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 9438419 - 9438378
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaat 164  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  9438419 gtcaagtagcctagtggttagaattcaccttataaggtgaat 9438378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 9491713 - 9491766
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||| || |||||    
T  9491713 gtcagttagcctagtggttagaattcatcttataaggtgaataagtggggtgtc 9491766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 12089214 - 12089161
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||| || |||||    
T  12089214 gtcaggtatcctagtggctagaattcaccttataaggtgaataagtggggtgtc 12089161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 22389728 - 22389781
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| |||| || ||||||||||||||||||||||||||| || |||||    
T  22389728 gtcaggtagtctagcggctagaattcaccttataaggtgaataagtggggtgtc 22389781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 30566175 - 30566122
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||| || |||||    
T  30566175 gtcaggtagtctagtggctggaattcaccttataaggtgaataagtggggtgtc 30566122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 35190877 - 35190836
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  35190877 aggtagtctagtggctagaattcaccttataaggtgaataag 35190836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 22501136 - 22501092
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||    
T  22501136 gtcaggtagtctagtggctagaattcaccttacaaggtgaataag 22501092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 15288945 - 15289008
Alignment:
Q  135 agtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccct 198  Q
    ||||| |||||||||||||||||| |||||||| || ||||||  | ||||||||||| |||||    
T  15288945 agtggctagaattcaccttataagatgaataagtggggtgtctggagttcgaaccccagcccct 15289008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 31761270 - 31761227
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||    
T  31761270 tcaggtagcttagtgattagaattcaccttataaggtgaataag 31761227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 16251504 - 16251554
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| ||||||  ||||||||||||||||||||||||||| || |||||    
T  16251504 aggtagcctagtgactagaattcaccttataaggtgaataagtggggtgtc 16251554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 22983686 - 22983644
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||||||||||||||||||| |||||||| || |||||    
T  22983686 tagtggttagaattcaccttataagatgaataagtggggtgtc 22983644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 23804722 - 23804764
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||||||||||||||||||| |||||||| || |||||    
T  23804722 tagtggttagaattcaccttataagatgaataagtggggtgtc 23804764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 3448469 - 3448416
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||| ||| |||||||||||||||||| |||||||| || |||||    
T  3448469 gtcaggtagcctattggctagaattcaccttataagatgaataagtggggtgtc 3448416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 6270597 - 6270630
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||| ||||||||||||||||||||||||||    
T  6270597 ctagtggctagaattcaccttataaggtgaataa 6270630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 7709990 - 7709957
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| |||||||||||||||||||||||||||    
T  7709990 tagtggatagaattcaccttataaggtgaataag 7709957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 166
Target Start/End: Complemental strand, 15126345 - 15126316
Alignment:
Q  137 tggttagaattcaccttataaggtgaataa 166  Q
    ||||||||||||||||||||||||||||||    
T  15126345 tggttagaattcaccttataaggtgaataa 15126316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 32057140 - 32057107
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||||||||||||||||||| ||||||||    
T  32057140 tagtggttagaattcaccttataagatgaataag 32057107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 7720482 - 7720534
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||| |||| || |||||| |||||||||||||||||||| || |||||    
T  7720482 tcaggtagcctagcggctagaatccaccttataaggtgaataagtggggtgtc 7720534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 36359696 - 36359749
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  36359696 gtcaggtagtctagtggctagaattcaccttataaggtgaataagtggggtgtc 36359749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 24074623 - 24074579
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  24074623 gtcaggtagcctagtggctagaattcaccttataaggtgaataag 24074579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 28378930 - 28378886
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||||||||  ||||||||||||||||||||||||||||||||||    
T  28378930 gtcaggtagtttagtggttagaattcaccttataaggtgaataag 28378886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 40249856 - 40249900
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||    
T  40249856 gtcaggtagcctagtggttagaattcatcttataaggtgaataag 40249900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 5184876 - 5184918
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  5184876 tagtggttagaattcaccttataaggtgaataagtggggtgtc 5184918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 15042354 - 15042396
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  15042354 tagtggttagaattcaccttataaggtgaataagtggggtgtc 15042396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 27558849 - 27558903
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||| || ||||||    
T  27558849 gtcaggtagactagtggctagaattcacctaataaggtgaataagtggggtgtct 27558903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 30542880 - 30542838
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  30542880 tcaggtattctagtggttagaattcaccttataaggtgaataa 30542838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 43874955 - 43875009
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtct 177  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||| || ||||||    
T  43874955 gtcaagtagcctagttgttagaattcaccttataaggtgaataagtggggtgtct 43875009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 4798519 - 4798572
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||| || |||||    
T  4798519 gtcaggtagtctagtggctagaattcaccttacaaggtgaataagtggggtgtc 4798572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 10184779 - 10184832
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||  ||||||||    
T  10184779 gtcaggtagtctaatggctagaattcaccttataaggtgaataaatggagtgtc 10184832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 23239241 - 23239188
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||| || |||||    
T  23239241 gtcaggtagtctagtggttaaaattcactttataaggtgaataagtggggtgtc 23239188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 43468683 - 43468736
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||| || |||||    
T  43468683 gtcagatagcctagtggctagaattcaccttataaggtgaataagtggggtgtc 43468736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 7649645 - 7649601
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||    
T  7649645 gtcaggtagcctagtggctagaattcaccttgtaaggtgaataag 7649601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 14683993 - 14683949
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||    
T  14683993 gtcaggtagtctagtgactagaattcaccttataaggtgaataag 14683949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 25689366 - 25689410
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| |||||||||||||||||| ||||||||||| ||||    
T  25689366 gtcaggtagcctagtggttagaattcactttataaggtgattaag 25689410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 37154631 - 37154588
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataa 166  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||    
T  37154631 gtcaggtagtctagtgcctagaattcaccttataaggtgaataa 37154588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 30461643 - 30461609
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||| |||||||||||||||||||||||||||    
T  30461643 ctagtggctagaattcaccttataaggtgaataag 30461609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 31373437 - 31373395
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaata 165  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||    
T  31373437 gtcagctagtctagtggctagaattcaccttataaggtgaata 31373395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 33570418 - 33570460
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| ||||||||||||||||||||||||||| || |||||    
T  33570418 tagtggctagaattcaccttataaggtgaataagtggggtgtc 33570460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 34073220 - 34073270
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| || |||| ||||||||||||||||||||||||||| || |||||    
T  34073220 aggtagtctcgtggctagaattcaccttataaggtgaataagtggggtgtc 34073270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 39484359 - 39484401
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||||||||||||||||||| |||||||| || |||||    
T  39484359 tagtggttagaattcaccttataagatgaataagtggggtgtc 39484401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 3379626 - 3379679
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||||||  || ||| ||||||||||||||||||||||||||| || |||||    
T  3379626 gtcaggtagcttaatggctagaattcaccttataaggtgaataagtggggtgtc 3379679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 13702341 - 13702374
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| |||||||||||||||||||||||||||    
T  13702341 tagtggctagaattcaccttataaggtgaataag 13702374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 14684194 - 14684247
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| || ||||||||||||||| |||||||| || |||||    
T  14684194 gtcaggtagcctagtggctataattcaccttataagatgaataagtggggtgtc 14684247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 44070357 - 44070390
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    |||||| |||||||||||||||||||||||||||    
T  44070357 tagtggctagaattcaccttataaggtgaataag 44070390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 6447330 - 6447294
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataagg 159  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  6447330 gtcaggtagtctagtagttagaattcaccttataagg 6447294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 9525074 - 9525030
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| |||  || |||||||||||||||||||||||||||    
T  9525074 gtcaggtagcctaacggctagaattcaccttataaggtgaataag 9525030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 10970383 - 10970339
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||  ||||||| ||||||||| |||||||||||||||||    
T  10970383 gtcaggtaacctagtggctagaattcatcttataaggtgaataag 10970339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 23857301 - 23857345
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| ||||||||||| |||||| ||||||||    
T  23857301 gtcaggtagcctagtggctagaattcaccgtataagatgaataag 23857345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 24608461 - 24608505
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| |||  || |||||||||||||||||||||||||||    
T  24608461 gtcaggtagcctaacggctagaattcaccttataaggtgaataag 24608505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 34632099 - 34632063
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataagg 159  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  34632099 gtcaggtagtctagtgattagaattcaccttataagg 34632063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 41125412 - 41125455
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||    
T  41125412 gtcaggtagcctagtgct-agaattcaccttataaggtgaataag 41125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 42761864 - 42761920
Alignment:
Q  144 aattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgc 200  Q
    |||||||||||||| ||||||||| ||||||||   | |||||||||| ||||||||    
T  42761864 aattcaccttataaagtgaataagtggagtgtccagagttcgaaccccgccccctgc 42761920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 44360915 - 44360959
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  44360915 gtcagatagtctagtggctagaattcaccttataaggtggataag 44360959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 9443 - 9391
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgt 175  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||    
T  9443 gtcagatagcctagtggctagaattcaccttataaggtgaataagtggagtgt 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 1001 - 934
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgc 200  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||    ||||||||||| |||||||    
T  1001 ctagtggctagaattcaccttataaggtgaataagtggggtgtctgggattcgaaccccagcccctgc 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 47305 - 47372
Alignment:
Q  133 ctagtggttagaattcaccttataaggtgaataaggggagtgtctttatttcgaaccccaccccctgc 200  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||    ||||||||||| |||||||    
T  47305 ctagtggctagaattcaccttataaggtgaataagtggggtgtctgggattcgaaccccagcccctgc 47372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 2605 - 2552
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||| || |||||    
T  2605 gtcaggtagtctagtggctggaattcaccttataaggtgaataagtggggtgtc 2552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 49937 - 49893
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||    
T  49937 gtcaggtagtctagtggctagaattcaccttataagttgaataag 49893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 101948 - 101904
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||    
T  101948 gtcacgtagtctagtggctagaattcaccttataaggtgaataag 101904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2098 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 167
Target Start/End: Original strand, 605 - 636
Alignment:
Q  136 gtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||||||||||||||||||||||||||    
T  605 gtggttagaattcaccttataaggtgaataag 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 4437 - 4387
Alignment:
Q  126 aggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||||| ||||||  ||||||||||||||||| ||||||||| ||||||||    
T  4437 aggtagtctagtgtctagaattcaccttataaagtgaataagtggagtgtc 4387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 167
Target Start/End: Original strand, 38615 - 38645
Alignment:
Q  137 tggttagaattcaccttataaggtgaataag 167  Q
    |||||||||||||||||||||||||||||||    
T  38615 tggttagaattcaccttataaggtgaataag 38645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 8666 - 8633
Alignment:
Q  134 tagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||||||||||| ||||||||||||||||    
T  8666 tagtggttagaattcacattataaggtgaataag 8633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 166712 - 166660
Alignment:
Q  124 tcaggtaggctagtggttagaattcaccttataaggtgaataaggggagtgtc 176  Q
    |||| ||| ||||||  |||||||||||||||||| |||||||| ||||||||    
T  166712 tcagatagtctagtgactagaattcaccttataagatgaataagtggagtgtc 166660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 8719 - 8679
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaa 163  Q
    ||||||||| || ||||||||||||||||||| ||||||||    
T  8719 gtcaggtagtctggtggttagaattcaccttagaaggtgaa 8679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 185490 - 185534
Alignment:
Q  123 gtcaggtaggctagtggttagaattcaccttataaggtgaataag 167  Q
    ||||||||| ||||| | |||||||||||||||||| ||||||||    
T  185490 gtcaggtagcctagtagctagaattcaccttataagatgaataag 185534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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