View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9711_high_10 (Length: 346)

Name: NF9711_high_10
Description: NF9711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9711_high_10
NF9711_high_10
[»] chr4 (87 HSPs)
chr4 (1-296)||(38928415-38928712)
chr4 (4-296)||(37313306-37313597)
chr4 (1-179)||(33415724-33415904)
chr4 (18-296)||(24446833-24447111)
chr4 (1-296)||(12401044-12401344)
chr4 (1-152)||(19095825-19095978)
chr4 (1-232)||(18537709-18537945)
chr4 (1-142)||(36378247-36378388)
chr4 (4-99)||(619687-619782)
chr4 (1-247)||(12396082-12396333)
chr4 (1-99)||(22044627-22044725)
chr4 (1-99)||(22801099-22801197)
chr4 (1-99)||(22802971-22803069)
chr4 (1-99)||(47274725-47274823)
chr4 (1-99)||(48486317-48486415)
chr4 (1-99)||(51015244-51015342)
chr4 (1-98)||(56030443-56030540)
chr4 (3-99)||(40091654-40091750)
chr4 (1-99)||(5198418-5198516)
chr4 (1-99)||(11434953-11435051)
chr4 (1-99)||(22046922-22047020)
chr4 (1-99)||(24878987-24879085)
chr4 (1-104)||(18409584-18409686)
chr4 (1-99)||(6764837-6764935)
chr4 (1-99)||(24888794-24888892)
chr4 (1-99)||(40637072-40637170)
chr4 (1-99)||(47868399-47868497)
chr4 (3-104)||(38270225-38270326)
chr4 (1-104)||(2891309-2891413)
chr4 (1-104)||(3937446-3937548)
chr4 (1-99)||(9174383-9174481)
chr4 (1-99)||(14633318-14633415)
chr4 (1-122)||(15032774-15032895)
chr4 (1-99)||(16934380-16934478)
chr4 (1-99)||(18847151-18847249)
chr4 (1-99)||(31849836-31849934)
chr4 (4-99)||(36919825-36919922)
chr4 (1-99)||(44600075-44600173)
chr4 (1-99)||(9148249-9148349)
chr4 (1-97)||(9176711-9176807)
chr4 (1-105)||(41997484-41997588)
chr4 (3-99)||(17662473-17662573)
chr4 (1-99)||(5100995-5101093)
chr4 (1-99)||(16932026-16932124)
chr4 (1-99)||(24880449-24880547)
chr4 (1-99)||(8631656-8631758)
chr4 (1-99)||(14787668-14787768)
chr4 (2-99)||(16453307-16453404)
chr4 (1-99)||(52942683-52942782)
chr4 (1-99)||(2485109-2485208)
chr4 (1-99)||(36921731-36921830)
chr4 (1-99)||(53405125-53405226)
chr4 (1-99)||(5637702-5637804)
chr4 (1-99)||(7941317-7941417)
chr4 (1-126)||(13543925-13544055)
chr4 (1-99)||(47210977-47211081)
chr4 (1-132)||(18535067-18535197)
chr4 (1-104)||(6132866-6132968)
chr4 (1-99)||(37089608-37089709)
chr4 (1-99)||(24348212-24348314)
chr4 (1-99)||(38409197-38409301)
chr4 (1-93)||(19322701-19322792)
chr4 (1-59)||(11006474-11006532)
chr4 (1-59)||(11008803-11008861)
chr4 (1-59)||(18709400-18709458)
chr4 (210-296)||(19095699-19095784)
chr4 (1-99)||(8756487-8756585)
chr4 (1-99)||(22132627-22132734)
chr4 (1-59)||(22134852-22134909)
chr4 (5-107)||(16186079-16186180)
chr4 (242-296)||(12396348-12396402)
chr4 (198-296)||(13543811-13543908)
chr4 (1-59)||(22780610-22780668)
chr4 (1-59)||(22782975-22783033)
chr4 (1-99)||(3824807-3824908)
chr4 (28-99)||(16455285-16455356)
chr4 (54-138)||(36380333-36380417)
chr4 (5-122)||(12102064-12102182)
chr4 (210-296)||(18535251-18535334)
chr4 (242-296)||(18537974-18538026)
chr4 (49-152)||(52043714-52043820)
chr4 (258-296)||(33415978-33416016)
chr4 (210-247)||(33415915-33415952)
chr4 (51-107)||(25357627-25357683)
chr4 (4-108)||(28453676-28453780)
chr4 (1-98)||(40999185-40999281)
chr4 (2-93)||(9863712-9863806)
[»] chr5 (63 HSPs)
chr5 (1-296)||(16092437-16092741)
chr5 (1-296)||(31472850-31473147)
chr5 (1-247)||(25903894-25904145)
chr5 (1-104)||(17072822-17072925)
chr5 (1-99)||(25921710-25921808)
chr5 (1-104)||(20042989-20043092)
chr5 (1-99)||(21947971-21948068)
chr5 (1-179)||(1189846-1190034)
chr5 (1-104)||(20044949-20045052)
chr5 (5-296)||(36208301-36208617)
chr5 (1-99)||(2174863-2174961)
chr5 (1-99)||(2818573-2818671)
chr5 (1-99)||(12556160-12556258)
chr5 (1-99)||(31542679-31542777)
chr5 (1-104)||(24126795-24126898)
chr5 (1-104)||(34530903-34531006)
chr5 (1-99)||(31179608-31179706)
chr5 (1-99)||(31545024-31545122)
chr5 (1-99)||(39854428-39854525)
chr5 (4-114)||(41585946-41586056)
chr5 (1-99)||(38882049-38882148)
chr5 (1-99)||(4236573-4236671)
chr5 (1-99)||(20507699-20507797)
chr5 (1-99)||(40221466-40221564)
chr5 (1-97)||(18509555-18509652)
chr5 (3-91)||(2954368-2954456)
chr5 (1-104)||(10474560-10474663)
chr5 (1-99)||(16776101-16776200)
chr5 (1-97)||(18511449-18511547)
chr5 (4-99)||(26097677-26097772)
chr5 (1-104)||(39398230-39398332)
chr5 (9-99)||(10529344-10529434)
chr5 (1-99)||(36402565-36402663)
chr5 (1-102)||(695830-695931)
chr5 (3-99)||(4410001-4410101)
chr5 (1-99)||(18596591-18596687)
chr5 (4-98)||(18466625-18466723)
chr5 (1-99)||(18468951-18469053)
chr5 (1-99)||(6756438-6756536)
chr5 (1-99)||(26098488-26098586)
chr5 (1-99)||(37706017-37706115)
chr5 (231-296)||(1190086-1190151)
chr5 (1-94)||(6661420-6661512)
chr5 (1-99)||(27912474-27912578)
chr5 (1-92)||(17818727-17818817)
chr5 (1-99)||(31466215-31466313)
chr5 (1-59)||(34477291-34477349)
chr5 (1-59)||(34479656-34479714)
chr5 (3-99)||(10586783-10586882)
chr5 (1-59)||(21684688-21684746)
chr5 (1-99)||(27910389-27910492)
chr5 (32-179)||(9020082-9020235)
chr5 (1-59)||(6747290-6747348)
chr5 (1-59)||(15552229-15552287)
chr5 (1-59)||(25804009-25804067)
chr5 (32-122)||(42770694-42770785)
chr5 (1-92)||(21288715-21288806)
chr5 (1-59)||(6745053-6745111)
chr5 (51-104)||(2723906-2723959)
chr5 (49-108)||(2144876-2144936)
chr5 (51-122)||(29748262-29748334)
chr5 (50-99)||(3373327-3373376)
chr5 (82-126)||(20053793-20053837)
[»] chr6 (58 HSPs)
chr6 (1-247)||(32447553-32447803)
chr6 (1-247)||(3390205-3390456)
chr6 (1-179)||(3233968-3234147)
chr6 (1-104)||(13057168-13057271)
chr6 (4-103)||(24338688-24338787)
chr6 (1-99)||(15532918-15533016)
chr6 (1-99)||(15541377-15541475)
chr6 (1-99)||(17852521-17852619)
chr6 (5-104)||(25477248-25477347)
chr6 (1-99)||(1072114-1072212)
chr6 (1-99)||(1230486-1230584)
chr6 (1-99)||(12195752-12195850)
chr6 (1-99)||(14507412-14507510)
chr6 (1-99)||(28241558-28241656)
chr6 (1-104)||(3632175-3632278)
chr6 (5-104)||(13870663-13870761)
chr6 (1-92)||(14459002-14459093)
chr6 (1-99)||(8995458-8995556)
chr6 (1-99)||(9019905-9020003)
chr6 (1-99)||(11983266-11983364)
chr6 (1-99)||(19227645-19227743)
chr6 (1-99)||(30729065-30729163)
chr6 (3-104)||(14466307-14466408)
chr6 (28-125)||(15346344-15346441)
chr6 (1-104)||(3630101-3630204)
chr6 (1-99)||(15530359-15530457)
chr6 (1-104)||(12161792-12161894)
chr6 (1-104)||(13039728-13039831)
chr6 (231-296)||(3396098-3396163)
chr6 (27-296)||(26944929-26945201)
chr6 (1-94)||(19704806-19704905)
chr6 (1-104)||(22490613-22490717)
chr6 (1-99)||(2629122-2629225)
chr6 (1-99)||(32279976-32280073)
chr6 (1-99)||(30967177-30967278)
chr6 (1-59)||(4816468-4816526)
chr6 (1-99)||(20915593-20915693)
chr6 (198-295)||(3234146-3234242)
chr6 (1-99)||(30034840-30034942)
chr6 (35-142)||(15366971-15367086)
chr6 (242-296)||(3390135-3390189)
chr6 (242-296)||(15719426-15719480)
chr6 (1-59)||(26065005-26065063)
chr6 (1-59)||(26084974-26085032)
chr6 (1-153)||(19696365-19696519)
chr6 (1-104)||(10584100-10584198)
chr6 (245-296)||(32447821-32447872)
chr6 (1-99)||(3028088-3028185)
chr6 (1-59)||(26932799-26932857)
chr6 (1-93)||(17012029-17012120)
chr6 (27-67)||(15719665-15719705)
chr6 (27-99)||(12186330-12186404)
chr6 (5-106)||(12937437-12937540)
chr6 (27-104)||(25466433-25466510)
chr6 (50-99)||(26066314-26066363)
chr6 (50-99)||(26068585-26068634)
chr6 (2-122)||(16455661-16455782)
chr6 (71-122)||(28038012-28038064)
[»] chr8 (60 HSPs)
chr8 (1-247)||(5622975-5623224)
chr8 (18-296)||(35872632-35872910)
chr8 (1-296)||(36865334-36865636)
chr8 (1-125)||(13858721-13858845)
chr8 (89-296)||(40877901-40878089)
chr8 (1-125)||(14419428-14419552)
chr8 (1-104)||(14477271-14477374)
chr8 (1-99)||(3886155-3886253)
chr8 (2-99)||(1225166-1225263)
chr8 (1-110)||(26775190-26775299)
chr8 (1-104)||(33541625-33541728)
chr8 (1-99)||(14807751-14807849)
chr8 (1-99)||(27826986-27827084)
chr8 (1-99)||(27829297-27829395)
chr8 (1-152)||(30480740-30480893)
chr8 (1-104)||(27107134-27107237)
chr8 (1-99)||(15072710-15072808)
chr8 (1-99)||(4424018-4424116)
chr8 (1-99)||(18810708-18810806)
chr8 (6-104)||(25952516-25952614)
chr8 (1-99)||(28251804-28251902)
chr8 (4-99)||(181537-181632)
chr8 (5-142)||(15185951-15186089)
chr8 (1-99)||(41382673-41382771)
chr8 (1-99)||(44720843-44720941)
chr8 (1-99)||(12517261-12517361)
chr8 (27-104)||(21482317-21482394)
chr8 (1-99)||(32339305-32339407)
chr8 (3-99)||(18812893-18812989)
chr8 (5-104)||(5372419-5372517)
chr8 (1-99)||(15067981-15068079)
chr8 (1-99)||(41384745-41384842)
chr8 (1-99)||(3874006-3874108)
chr8 (1-99)||(15809215-15809317)
chr8 (1-99)||(24873418-24873522)
chr8 (1-99)||(27911015-27911112)
chr8 (1-99)||(27957434-27957531)
chr8 (1-99)||(22684893-22685001)
chr8 (1-99)||(28283456-28283560)
chr8 (231-296)||(30481028-30481093)
chr8 (27-99)||(2468361-2468433)
chr8 (12-68)||(37214458-37214514)
chr8 (18-99)||(43530124-43530209)
chr8 (1-59)||(608774-608832)
chr8 (1-59)||(43082013-43082071)
chr8 (27-122)||(31162189-31162286)
chr8 (1-49)||(43079652-43079700)
chr8 (242-284)||(5623240-5623282)
chr8 (56-110)||(6375978-6376032)
chr8 (1-98)||(31035068-31035167)
chr8 (27-71)||(21480542-21480586)
chr8 (262-301)||(21482121-21482160)
chr8 (242-296)||(13858966-13859020)
chr8 (49-99)||(14419782-14419832)
chr8 (83-140)||(17799752-17799810)
chr8 (258-292)||(30422850-30422884)
chr8 (69-122)||(17847505-17847558)
chr8 (258-294)||(2268832-2268868)
chr8 (242-278)||(14419695-14419731)
chr8 (83-150)||(33032440-33032508)
[»] chr2 (53 HSPs)
chr2 (1-247)||(28196406-28196655)
chr2 (4-296)||(38414281-38414564)
chr2 (1-179)||(17848283-17848461)
chr2 (1-296)||(17848814-17849135)
chr2 (1-151)||(31733002-31733154)
chr2 (1-296)||(45239213-45239497)
chr2 (1-110)||(19007549-19007658)
chr2 (1-99)||(40032295-40032393)
chr2 (1-99)||(24162449-24162547)
chr2 (1-179)||(11578342-11578522)
chr2 (1-104)||(22163184-22163287)
chr2 (1-99)||(13910281-13910379)
chr2 (1-99)||(19504582-19504680)
chr2 (1-99)||(27104719-27104817)
chr2 (1-104)||(11739797-11739900)
chr2 (1-99)||(22287573-22287671)
chr2 (1-99)||(22407646-22407744)
chr2 (1-99)||(42064435-42064533)
chr2 (1-104)||(3022078-3022181)
chr2 (2-104)||(14837188-14837290)
chr2 (1-99)||(42452703-42452801)
chr2 (1-104)||(15539712-15539815)
chr2 (3-98)||(19502250-19502345)
chr2 (1-99)||(45280221-45280320)
chr2 (1-99)||(43623805-43623903)
chr2 (27-122)||(37963190-37963286)
chr2 (15-98)||(6264396-6264479)
chr2 (27-142)||(22874019-22874134)
chr2 (1-99)||(6259052-6259150)
chr2 (1-99)||(21520930-21521030)
chr2 (1-99)||(23452474-23452576)
chr2 (5-104)||(38020058-38020157)
chr2 (1-104)||(44289305-44289408)
chr2 (1-104)||(34979816-34979919)
chr2 (210-296)||(31733196-31733281)
chr2 (1-99)||(5377666-5377768)
chr2 (1-99)||(42923746-42923846)
chr2 (3-59)||(38020162-38020218)
chr2 (242-296)||(28196337-28196391)
chr2 (1-59)||(35215823-35215881)
chr2 (28-104)||(12342673-12342750)
chr2 (27-99)||(18800565-18800637)
chr2 (231-293)||(17848161-17848222)
chr2 (5-59)||(35218204-35218258)
chr2 (1-108)||(17897479-17897586)
chr2 (1-106)||(35107213-35107317)
chr2 (49-108)||(40699221-40699280)
chr2 (49-122)||(20589557-20589631)
chr2 (27-122)||(13828603-13828698)
chr2 (4-122)||(20146987-20147107)
chr2 (49-122)||(35028476-35028550)
chr2 (2-43)||(41304627-41304667)
chr2 (82-142)||(45156928-45156988)
[»] chr7 (74 HSPs)
chr7 (1-296)||(20137346-20137665)
chr7 (1-296)||(42222891-42223209)
chr7 (1-179)||(11355130-11355310)
chr7 (1-296)||(4296172-4296452)
chr7 (1-224)||(9680638-9680871)
chr7 (1-142)||(22828870-22829012)
chr7 (5-99)||(27306470-27306564)
chr7 (1-99)||(42331236-42331334)
chr7 (3-99)||(35583-35679)
chr7 (3-99)||(44518-44614)
chr7 (1-142)||(7188453-7188594)
chr7 (1-104)||(21679976-21680079)
chr7 (1-99)||(1049532-1049630)
chr7 (1-99)||(18567567-18567665)
chr7 (1-99)||(31435284-31435382)
chr7 (1-93)||(24258423-24258515)
chr7 (1-104)||(25276090-25276193)
chr7 (1-104)||(39146224-39146327)
chr7 (1-104)||(44724528-44724631)
chr7 (1-103)||(24748544-24748646)
chr7 (1-104)||(21678015-21678118)
chr7 (1-99)||(25542485-25542582)
chr7 (1-99)||(31156148-31156246)
chr7 (1-99)||(26804527-26804621)
chr7 (1-97)||(7470259-7470359)
chr7 (1-99)||(443549-443647)
chr7 (1-88)||(3878540-3878629)
chr7 (1-99)||(13099713-13099811)
chr7 (1-99)||(22251779-22251877)
chr7 (1-99)||(40836979-40837077)
chr7 (1-98)||(37412365-37412462)
chr7 (1-99)||(38393936-38394038)
chr7 (1-97)||(7472217-7472317)
chr7 (5-99)||(3035671-3035769)
chr7 (1-126)||(9678981-9679111)
chr7 (1-98)||(21990106-21990202)
chr7 (1-99)||(48457603-48457705)
chr7 (31-99)||(22392427-22392495)
chr7 (1-122)||(20091779-20091900)
chr7 (1-97)||(20625990-20626090)
chr7 (1-97)||(20629881-20629981)
chr7 (1-97)||(20642300-20642400)
chr7 (1-103)||(27832870-27832973)
chr7 (1-99)||(11757178-11757281)
chr7 (1-99)||(20299408-20299511)
chr7 (1-99)||(7349510-7349614)
chr7 (1-99)||(18345491-18345593)
chr7 (1-99)||(28485516-28485618)
chr7 (4-97)||(7092414-7092512)
chr7 (1-99)||(7351889-7351993)
chr7 (1-78)||(21592380-21592457)
chr7 (1-99)||(43253753-43253859)
chr7 (27-98)||(24465503-24465575)
chr7 (1-59)||(1849975-1850033)
chr7 (1-110)||(24817587-24817694)
chr7 (1-99)||(20297312-20297414)
chr7 (1-99)||(28487503-28487605)
chr7 (1-54)||(40946327-40946380)
chr7 (4-97)||(7094662-7094759)
chr7 (1-49)||(38396320-38396368)
chr7 (1-59)||(1047161-1047219)
chr7 (198-296)||(9678867-9678964)
chr7 (242-296)||(9680545-9680598)
chr7 (231-296)||(11355013-11355077)
chr7 (31-98)||(3677235-3677301)
chr7 (242-296)||(24817852-24817906)
chr7 (1-93)||(6348778-6348871)
chr7 (50-99)||(1606424-1606473)
chr7 (41-110)||(30906327-30906396)
chr7 (83-138)||(6067511-6067566)
chr7 (31-108)||(6332171-6332248)
chr7 (2-43)||(11081522-11081562)
chr7 (263-296)||(24815587-24815620)
chr7 (49-108)||(6048617-6048677)
[»] chr3 (96 HSPs)
chr3 (4-296)||(3306521-3306818)
chr3 (1-296)||(6231172-6231471)
chr3 (1-296)||(3314407-3314706)
chr3 (3-296)||(51674992-51675290)
chr3 (3-305)||(53590905-53591215)
chr3 (1-294)||(890008-890303)
chr3 (1-296)||(47149130-47149454)
chr3 (1-231)||(880687-880922)
chr3 (1-125)||(28761663-28761787)
chr3 (1-168)||(54691809-54691978)
chr3 (1-247)||(31151120-31151370)
chr3 (1-103)||(1626918-1627020)
chr3 (1-99)||(11170328-11170426)
chr3 (1-99)||(24979631-24979729)
chr3 (3-104)||(28137532-28137633)
chr3 (1-104)||(28100276-28100379)
chr3 (1-104)||(28102237-28102340)
chr3 (1-104)||(47701830-47701933)
chr3 (1-99)||(3859452-3859550)
chr3 (1-99)||(4308516-4308614)
chr3 (1-99)||(11163074-11163172)
chr3 (1-99)||(15780784-15780882)
chr3 (1-122)||(23633360-23633481)
chr3 (1-99)||(45882863-45882961)
chr3 (3-99)||(5522852-5522948)
chr3 (1-93)||(6561740-6561832)
chr3 (1-103)||(5926999-5927101)
chr3 (1-99)||(26720472-26720570)
chr3 (1-99)||(35777345-35777443)
chr3 (1-149)||(43421650-43421799)
chr3 (1-104)||(28180943-28181044)
chr3 (1-99)||(6066031-6066130)
chr3 (1-99)||(12268200-12268299)
chr3 (1-100)||(43423698-43423797)
chr3 (1-99)||(5191577-5191675)
chr3 (1-99)||(22114540-22114638)
chr3 (1-99)||(35918184-35918282)
chr3 (1-99)||(48361906-48362003)
chr3 (1-99)||(51727241-51727339)
chr3 (1-99)||(53915731-53915829)
chr3 (1-99)||(6063681-6063781)
chr3 (1-98)||(10956262-10956359)
chr3 (1-98)||(10958558-10958655)
chr3 (1-104)||(36011746-36011849)
chr3 (1-99)||(43228215-43228313)
chr3 (1-99)||(51943295-51943393)
chr3 (1-99)||(53917899-53917997)
chr3 (26-99)||(1321365-1321438)
chr3 (1-99)||(4104130-4104232)
chr3 (1-99)||(18162588-18162685)
chr3 (11-99)||(43226010-43226098)
chr3 (1-99)||(18097135-18097234)
chr3 (1-99)||(18099405-18099503)
chr3 (1-99)||(1313334-1313431)
chr3 (1-99)||(50493923-50494021)
chr3 (1-142)||(53597121-53597261)
chr3 (1-99)||(455827-455929)
chr3 (1-99)||(458204-458306)
chr3 (1-110)||(23636940-23637048)
chr3 (1-98)||(27635862-27635959)
chr3 (3-92)||(32219026-32219115)
chr3 (1-99)||(32264274-32264376)
chr3 (13-104)||(53468702-53468793)
chr3 (1-99)||(39715394-39715491)
chr3 (1-99)||(746675-746779)
chr3 (1-99)||(10084624-10084726)
chr3 (1-99)||(25533358-25533464)
chr3 (3-107)||(4560502-4560606)
chr3 (1-59)||(30005805-30005863)
chr3 (1-59)||(42990268-42990326)
chr3 (1-99)||(27101416-27101518)
chr3 (1-99)||(42992206-42992308)
chr3 (1-99)||(38889963-38890062)
chr3 (1-59)||(38210334-38210392)
chr3 (234-296)||(54692046-54692108)
chr3 (5-99)||(10191548-10191646)
chr3 (31-152)||(13420437-13420557)
chr3 (1-58)||(41849117-41849174)
chr3 (10-142)||(54884037-54884170)
chr3 (35-99)||(6484309-6484373)
chr3 (1-59)||(10621765-10621823)
chr3 (1-106)||(24177196-24177301)
chr3 (1-59)||(25388870-25388928)
chr3 (1-59)||(29956650-29956708)
chr3 (1-59)||(9604842-9604899)
chr3 (3-60)||(4666488-4666545)
chr3 (5-122)||(1618896-1619015)
chr3 (49-99)||(6719394-6719444)
chr3 (69-122)||(25635320-25635374)
chr3 (242-294)||(880953-881004)
chr3 (63-103)||(4663839-4663879)
chr3 (69-201)||(7768395-7768530)
chr3 (262-296)||(23636730-23636764)
chr3 (49-99)||(29956588-29956638)
chr3 (49-99)||(30005743-30005793)
chr3 (45-99)||(53896475-53896529)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-196)||(79715-79910)
scaffold0004 (233-296)||(79664-79726)
[»] chr1 (91 HSPs)
chr1 (3-247)||(17318684-17318933)
chr1 (1-296)||(50307786-50308074)
chr1 (1-296)||(50076911-50077190)
chr1 (1-232)||(11457714-11457950)
chr1 (1-296)||(40133661-40133986)
chr1 (4-247)||(50079063-50079310)
chr1 (1-103)||(25251514-25251616)
chr1 (3-99)||(28207307-28207403)
chr1 (1-99)||(13215025-13215123)
chr1 (1-99)||(28998492-28998590)
chr1 (1-99)||(29004208-29004306)
chr1 (1-99)||(41646864-41646962)
chr1 (1-100)||(2617459-2617558)
chr1 (1-152)||(12302744-12302903)
chr1 (1-99)||(13761781-13761879)
chr1 (1-99)||(20302403-20302501)
chr1 (1-99)||(38925717-38925815)
chr1 (1-99)||(51749983-51750081)
chr1 (4-104)||(25248756-25248856)
chr1 (1-142)||(9241325-9241466)
chr1 (1-104)||(17186367-17186470)
chr1 (1-99)||(6822959-6823057)
chr1 (1-99)||(15823490-15823588)
chr1 (5-99)||(31423117-31423211)
chr1 (1-99)||(47451592-47451690)
chr1 (1-106)||(16428590-16428695)
chr1 (1-98)||(18307054-18307151)
chr1 (1-104)||(31489854-31489957)
chr1 (1-99)||(10400067-10400165)
chr1 (1-99)||(39462463-39462561)
chr1 (1-99)||(28842437-28842537)
chr1 (1-99)||(6823828-6823927)
chr1 (1-104)||(18839526-18839629)
chr1 (31-110)||(49495468-49495547)
chr1 (1-99)||(16226111-16226209)
chr1 (1-99)||(20291401-20291499)
chr1 (1-122)||(42922154-42922275)
chr1 (11-104)||(50248821-50248914)
chr1 (28-104)||(14183852-14183928)
chr1 (3-99)||(16231545-16231641)
chr1 (12-104)||(17324004-17324096)
chr1 (1-97)||(21948426-21948526)
chr1 (1-97)||(39932017-39932115)
chr1 (1-99)||(6995939-6996037)
chr1 (1-99)||(51752309-51752407)
chr1 (1-99)||(9459656-9459760)
chr1 (1-99)||(9463483-9463587)
chr1 (1-99)||(28840622-28840722)
chr1 (1-99)||(31735760-31735862)
chr1 (1-99)||(47177302-47177404)
chr1 (1-99)||(47179653-47179755)
chr1 (1-99)||(2949470-2949568)
chr1 (1-99)||(6756471-6756569)
chr1 (1-99)||(14098209-14098307)
chr1 (1-59)||(15295073-15295131)
chr1 (1-79)||(31425258-31425336)
chr1 (1-99)||(2510563-2510665)
chr1 (1-99)||(3579855-3579955)
chr1 (1-153)||(8347509-8347662)
chr1 (5-99)||(27337181-27337279)
chr1 (217-296)||(12302950-12303029)
chr1 (1-104)||(18800809-18800911)
chr1 (1-99)||(24325600-24325705)
chr1 (1-99)||(27339369-27339471)
chr1 (1-99)||(47906208-47906312)
chr1 (1-99)||(17324875-17324973)
chr1 (1-59)||(25127856-25127914)
chr1 (5-99)||(48665115-48665215)
chr1 (51-122)||(16431021-16431093)
chr1 (1-73)||(4131618-4131692)
chr1 (1-122)||(8349288-8349410)
chr1 (5-93)||(26520360-26520449)
chr1 (28-122)||(26613503-26613600)
chr1 (242-296)||(50079326-50079380)
chr1 (27-99)||(30790658-30790731)
chr1 (1-49)||(46431946-46431994)
chr1 (3-49)||(16432399-16432445)
chr1 (69-142)||(26979832-26979905)
chr1 (252-296)||(17318615-17318659)
chr1 (5-118)||(30738869-30738982)
chr1 (63-108)||(43104094-43104139)
chr1 (69-140)||(4144997-4145069)
chr1 (27-67)||(6115344-6115384)
chr1 (2-122)||(27916418-27916540)
chr1 (261-296)||(14184109-14184144)
chr1 (4-78)||(13125699-13125772)
chr1 (49-99)||(46432015-46432065)
chr1 (56-97)||(15295142-15295183)
chr1 (5-93)||(13127873-13127959)
chr1 (264-296)||(17352800-17352832)
chr1 (242-294)||(31425480-31425532)
[»] scaffold0045 (2 HSPs)
scaffold0045 (1-154)||(85130-85281)
scaffold0045 (204-258)||(85045-85100)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-99)||(3950-4048)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-99)||(2833-2931)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-99)||(1068-1166)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-99)||(41720-41818)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-99)||(6152-6250)
[»] scaffold0131 (2 HSPs)
scaffold0131 (5-99)||(14972-15066)
scaffold0131 (1-59)||(14619-14677)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-99)||(183877-183974)
scaffold0005 (1-99)||(51962-52062)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-97)||(79140-79236)
[»] scaffold0224 (1 HSPs)
scaffold0224 (1-122)||(16056-16177)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-99)||(11710-11808)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-99)||(69528-69630)
scaffold0025 (1-99)||(73260-73362)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-104)||(35588-35690)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-59)||(34-92)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-59)||(29164-29222)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-98)||(16885-16981)
[»] scaffold0511 (1 HSPs)
scaffold0511 (2-58)||(2036-2092)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-90)||(1869-1958)
[»] scaffold0133 (1 HSPs)
scaffold0133 (41-93)||(4773-4825)


Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 38928415 - 38928712
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  38928415 atacaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactctaatacaaagcctatatttatagtaaaaga 38928514  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccgaat 198  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||  ||||||||||||||||||||||||||||| | |||||| ||| |    
T  38928515 atccctcataaattggaacaaaatcaggcccaaaaatacgttttatttttctgaatctgcgcaaaatcgtactccgattttgccagatcgtgcttcgatt 38928614  T
Q  199 -tttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
     |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  38928615 atttatgaatgaaagtgccaattctgctccaagaaatcgtgctccgattttgacagcttcagcaaac-tcaatttctccaattttgagtcaatttcaca 38928712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 4 - 296
Target Start/End: Original strand, 37313306 - 37313597
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||    
T  37313306 caaaccctaattttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactttgatacaaaacctatatttatagtaaaa-aatc 37313404  T
Q  104 cctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccgaatttt 201  Q
    ||||| | |||| |||||||||||||||||| ||||||| |||||||||||  || |||||||||||||||||||||||||| | ||||||||| |||||    
T  37313405 cctcaaaaattgaaacaaaatcaggcccaaagatacgttttatttttatgattctacgcaaaatcgtactccgattttgccagatcgtgctccg-atttt 37313503  T
Q  202 atgaat-gtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    | |||| | ||||| ||||||| |||| ||||||||| || |||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  37313504 acgaatggaaagtgtcaattcttctcc-aaaaatcgtactccgattttgacagctt-cgtaaacttcaatttctccaattttgagtcactttcaca 37313597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 33415724 - 33415904
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |    
T  33415724 atacaaaccctagttttgttgttacctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttgtagtaaaaaa 33415823  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgatttt 179  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||| ||||||||||    
T  33415824 atccctcataaattggaacaaaatcaggcccaaaaatacgttttatttttctgactctgcgcaaaatcgtgctccgatttt 33415904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 24446833 - 24447111
Alignment:
Q  18 gttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcatagattgga 117  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||| |||||||||| ||||||    
T  24446833 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatccctcataaattgga 24446932  T
Q  118 acaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga-attttatgaatgtaag 212  Q
    || |||||| ||||  ||||||| ||| |||||||||    |||||| ||||||| ||||||||||||||     ||||||||  ||||| ||||| |||    
T  24446933 accaaatcatgcccataaaaatatgttttatttttattcttctgcgcgaaatcgtgctccgattttgcca-----tgctccgattttttacgaatgaaag 24447027  T
Q  213 tgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    || |||||||||||| |||||||||||| | ||||||||||||| ||||||||||||||| | |||||||||||| ||||||||    
T  24447028 tgtcaattctgctccgaaaaatcgtgctccaattttgacagcttcagcaaacttcaatttattcaattttgagtccctttcaca 24447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 12401044 - 12401344
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||| ||||||  | |||||| | ||||||||||||||||||     
T  12401044 atacaaaccctagttttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagc 12401143  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||||||||| | |||||| ||||||||| |  ||||||||||| |||||||||    |||| | || |||| ||| |||||| | | | ||||| || |    
T  12401144 atccctcataaactggaaccaaatcaggctcataaaaatacgttttatttttattcttctgcacgaattcgtgctctgatttttctagatcgtgc-ccta 12401242  T
Q  197 at--tttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttca 294  Q
    ||  |||| ||||| ||||||||||||||||| |||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  12401243 attatttacgaatgaaagtgccaattctgctctaaaaaatcgtactccgattttgacagcttcagcaaacttgaatttctccaattttgagtaactttca 12401342  T
Q  295 ca 296  Q
    ||    
T  12401343 ca 12401344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 19095978 - 19095825
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| ||||||||| | ||||||||||||||||||     
T  19095978 atacaaaccctaattttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagc 19095879  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat 152  Q
    |||||||||| |||||||| |||||||||||  ||||||||||| |||||||||    
T  19095878 atccctcataaattggaaccaaatcaggcccataaaaatacgttttatttttat 19095825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 18537709 - 18537945
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||| |||||| | ||||||||||||||||| |||||| ||||||||||| ||||||||||||||||   ||||||||||||||||||    
T  18537709 atacaaaccctagttt-gttgtt-tgtttctaaacccttgttttcagccccctctatctcaatgtttactctgatacaagatctatatttatagtaaaag 18537806  T
Q  100 aatccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttatg--actgcgcaaaatcgtactccgattttgccataccgtgctccg 195  Q
     ||| |||||| ||||||||||||||| ||||  ||||||||||| ||||||||||   | ||||||||||||||||||||||||| | | ||||||  |    
T  18537807 catcactcataaattggaacaaaatcatgcccataaaaatacgttttatttttatgcttccgcgcaaaatcgtactccgattttgctagatcgtgctttg 18537906  T
Q  196 a-attttatgaa-tgtaagtgccaattctgctccaaaaa 232  Q
    |  ||||| ||| || ||||||||||||||||| |||||    
T  18537907 attttttacgaattggaagtgccaattctgctctaaaaa 18537945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 36378388 - 36378247
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||| |||||||||||| ||||||||||||||||||     
T  36378388 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttattctgatacaaagtctatatttatagtaaaagt 36378289  T
Q  101 atccctcat-agattggaacaaaatcaggcccaaaaatacgtt 142  Q
    | ||||||| | |||| ||| ||||| ||||||||||||||||    
T  36378288 aaccctcataaaattgtaac-aaatctggcccaaaaatacgtt 36378247  T

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Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 619687 - 619782
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  619687 caaaccctagttttgttgttgtctttataaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 619782  T

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Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 12396082 - 12396333
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||| ||||||  | |||||| | ||||||||||||||||||     
T  12396082 atacaaaccctagttttgttgttgcctttctaaatccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaagc 12396181  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||||||||| | |||||| ||||||||| |  ||||||||||| |||||||||    |||| | || |||| ||| |||||| | | | ||||| || |    
T  12396182 atccctcataaactggaaccaaatcaggctcataaaaatacgttttatttttattcttctgcacgaattcgtgctctgatttttctagatcgtgc-ccta 12396280  T
Q  197 at--tttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattt 247  Q
    ||  |||| ||||| ||||||||||||||||| |||||||||| || ||||||    
T  12396281 attatttacgaatgaaagtgccaattctgctctaaaaaatcgtactccgattt 12396333  T

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Target: chr4; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22044627 - 22044725
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  22044627 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 22044725  T

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Target: chr4; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22801099 - 22801197
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22801099 atacaaactctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22801197  T

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Target: chr4; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22802971 - 22803069
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22802971 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22803069  T

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Target: chr4; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47274823 - 47274725
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  47274823 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 47274725  T

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Target: chr4; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 48486415 - 48486317
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  48486415 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 48486317  T

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Target: chr4; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 51015342 - 51015244
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||    
T  51015342 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaagtctatatttatagtaaaag 51015244  T

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Target: chr4; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 56030540 - 56030443
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  56030540 atacaaactctagttttgttgttgtcattctaaacccttgtttcagccccttctatctcaaggtttactctgatacaaagcctatatttatagtaaaa 56030443  T

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Target: chr4; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 40091654 - 40091750
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  40091654 acaatccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaag 40091750  T

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Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5198516 - 5198418
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  5198516 atacaaatcctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 5198418  T

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Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11435051 - 11434953
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  11435051 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 11434953  T

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Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22046922 - 22047020
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||| ||||||| ||||||||||||||||||||    
T  22046922 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctccgatacaaggcctatatttatagtaaaag 22047020  T

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Target: chr4; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24879085 - 24878987
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| | ||||||||||||||||||    
T  24879085 atacaaaccctagttttgttgttgtctttctaaaccctagtttcagccccctctatctccaagtttactcggatacaaggtctatatttatagtaaaag 24878987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18409584 - 18409686
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||  |||||| ||||||||||  |||||||||||||||||||    
T  18409584 atacaaaccctagttttgttgttgcctttctaaacccttgtttcag-cctctctatctcattgtttacactgatacaaattctatatttatagtaaaaga 18409682  T
Q  101 atcc 104  Q
    ||||    
T  18409683 atcc 18409686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6764935 - 6764837
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  6764935 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 6764837  T

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Target: chr4; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24888892 - 24888794
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  24888892 atacaatccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtaaaag 24888794  T

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Target: chr4; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40637170 - 40637072
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||| ||||    
T  40637170 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtgaaag 40637072  T

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Target: chr4; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47868497 - 47868399
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||| | ||||||||||||| ||||    
T  47868497 atacaaaccctagttttgttgttgcctttctaaacccttctttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtgaaag 47868399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 38270225 - 38270326
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaat 102  Q
    |||||||||||||||||||||| |||||||||||||||||||||||   |||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  38270225 acaaaccctagttttgttgttgcctttctaaacccttgtttcagcctcttctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaat 38270324  T
Q  103 cc 104  Q
    ||    
T  38270325 cc 38270326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2891413 - 2891309
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctga-tacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| || |||||| |||| ||||| | ||||||||||||||||||    
T  2891413 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacactgattacaatgtctatatttatagtaaaag 2891314  T
Q  100 aatcc 104  Q
    |||||    
T  2891313 aatcc 2891309  T

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Target: chr4; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3937446 - 3937548
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||| | ||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  3937446 atacaaactctagtttttttgttgcctttctaaacccttgtttcagctccctctatctcaaggtttactctgata-aaagtctatatttatagtaaaaga 3937544  T
Q  101 atcc 104  Q
    ||||    
T  3937545 atcc 3937548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9174383 - 9174481
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| |||||| || |||||||| | ||||||||||||||||||    
T  9174383 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaaag 9174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14633415 - 14633318
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  14633415 atacaaactctagttttgttgttgcctttctaaacctttgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 14633318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15032774 - 15032895
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||| || |||||||| |||||||||| ||| ||| ||||||||||||||||||     
T  15032774 atacaaaccctagttttcttgttgactt-ctaaacccttgtttcagccccctttatctcaaggtttactctggtaccaagtctatatttatagtaaaagt 15032872  T
Q  101 atccctcat-agattggaacaaa 122  Q
    ||||||||| | |||||||||||    
T  15032873 atccctcataaaattggaacaaa 15032895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16934380 - 16934478
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| |||||||||||||||| || |||||||| | ||||||||||||||||||    
T  16934380 atacaaaccctagttttgttgttgcttttctaaacccttgtatcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16934478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18847249 - 18847151
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||  | |||||||| | ||||||||||||||||||    
T  18847249 atacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctctatctcaaagtttgttttgatacaaggtctatatttatagtaaaag 18847151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31849836 - 31849934
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||  ||||| |||||||||||  ||||||||| |||||||||    
T  31849836 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcctagtttgctctgatacaagacctatatttctagtaaaag 31849934  T

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Target: chr4; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 36919825 - 36919922
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatc--tcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||  ||||||||||||||||||||| | ||||||||||||||||||    
T  36919825 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaag 36919922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44600075 - 44600173
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||| || | |||||| | ||||||||||||||||||    
T  44600075 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttaatacaaggtctatatttatagtaaaag 44600173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9148349 - 9148249
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||| |||||  ||||||||||| ||||||||||| |||||||||||||||||||    
T  9148349 atacaaatcctagttttgttgttgcctttctaaacccttgcttcagccccctctatctctcaaagtttgctctgatacaaggcctatatttatagtaaaa 9148250  T
Q  99 g 99  Q
    |    
T  9148249 g 9148249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9176711 - 9176807
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| |||||| || |||||||| | ||||||||||||||||    
T  9176711 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaa 9176807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41997588 - 41997484
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||| ||||||||||||||  |||||| ||| ||||||||||||| || |||||||| |||||||||||||||||| |||||||||||||| ||||    
T  41997588 atacaaactctagttttgttgtttcctttctgaacacttgtttcagccccctttatctcaaggtttactctgatacaaagtctatatttatagtagaaga 41997489  T
Q  101 atccc 105  Q
    |||||    
T  41997488 atccc 41997484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 17662473 - 17662573
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||| ||||||||||| | |||||||||||||||||    
T  17662473 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaa 17662572  T
Q  99 g 99  Q
    |    
T  17662573 g 17662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5101093 - 5100995
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||| |||||| ||||| ||| | ||||||||||||||||||    
T  5101093 atacaaaccctagttttgttgttgtcattctaaacctttgtttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttatagtaaaag 5100995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16932026 - 16932124
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||| |||||||||||||||| || |||||||| |  |||||||||||||||||    
T  16932026 atacaaaccctagttttgttgttgcttttctaaacccttgtatcagccccctctatctcaaagtttgctttgatacaaggtttatatttatagtaaaag 16932124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24880547 - 24880449
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||||| ||||  |||| ||||||||| |||||||||| ||||||| | ||||||||||||||||||    
T  24880547 atacaaaccctagttttgttgttgcctttctaaaccctagtttacgccccctctatctccaagtttactccgatacaaggtctatatttatagtaaaag 24880449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8631656 - 8631758
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||| || |||||||||| ||||||||||||| |    
T  8631656 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaagtctatatttatagtga 8631755  T
Q  97 aag 99  Q
    |||    
T  8631756 aag 8631758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14787668 - 14787768
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||  |||||||||||| | |||||||| | |||||||||||||||||    
T  14787668 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaa 14787767  T
Q  99 g 99  Q
    |    
T  14787768 g 14787768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 16453404 - 16453307
Alignment:
Q  2 tacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| |||||||||   |||| |||||||||||||||||||||||||| |||||    
T  16453404 tacaaactctagttttgttgttgcctttttaaacccttgtttcagccccctctatctctcggtttgctctgatacaaagcctatatttatagcaaaag 16453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 52942683 - 52942782
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctg--atacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||  |||||| | ||||||||||||| |||    
T  52942683 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccc-ctctatctcaaagtttagtctgatatacaaggtctatatttatagtgaaa 52942781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2485109 - 2485208
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctc-tctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| | |||| |||||||||| ||||||||||| | ||||||||||||| ||||    
T  2485109 atacaaaccctagttttgttgttgcctttctaaacccttgttttagcccccttctagctcaaagtttgctctgatacaaggtctatatttatagtgaaag 2485208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36921731 - 36921830
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttca-gccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||| |||||||||||  |||||| | ||||||||||||||||||||||| | |||||||||| |||||||    
T  36921731 atacaaaccctagttttgttgttgcctttctaagcccttgtttcaccccctctatctctcaaagtttactctgatacaaggtctatatttattgtaaaag 36921830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 53405226 - 53405125
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcc---ctctctatctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||   || ||| ||||||||||||  ||||||||| | ||||||||||||||||    
T  53405226 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaa 53405127  T
Q  98 ag 99  Q
    ||    
T  53405126 ag 53405125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5637702 - 5637804
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||    ||||||||||| |||| |||||| | |||||||||||||||    
T  5637702 atacaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctctatctctctcaaagtttgctcttatacaaggtctatatttatagtaa 5637801  T
Q  97 aag 99  Q
    |||    
T  5637802 aag 5637804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7941417 - 7941317
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaa--gtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||     |||| ||||||||||| | |||||||||||||||||    
T  7941417 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcccggtttgctctgatacaacgtctatatttatagtaaaa 7941318  T
Q  99 g 99  Q
    |    
T  7941317 g 7941317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13544055 - 13543925
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttac-tctgatacaaagcctatatttatagta 95  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||| |||||    ||||||||||||| ||||||||||   ||||||||||||||    
T  13544055 atacaaaccctagttttgttgttgtcattctagatccttgtttcagccccctctatctctctcaaagtttacatctgatacaagatctatatttatagta 13543956  T
Q  96 aaagaatccctcatagattggaacaaaatca 126  Q
    |||  |||||||||| |||| ||| ||||||    
T  13543955 aaaacatccctcataaattgaaaccaaatca 13543925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 47210977 - 47211081
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta------tctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||      ||||||||||||  ||||||||| | |||||||||||||    
T  47210977 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccctctcaaagtttagcctgatacaaggtctatatttatagt 47211076  T
Q  95 aaaag 99  Q
    |||||    
T  47211077 aaaag 47211081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18535067 - 18535197
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||| |||||| | ||| ||||| ||||||| |||||| ||||||||||| |||||||||||  | | | |||||||||| |||||||    
T  18535067 atacaaaccctagttt-gttgtt-tgtttttaaacacttgttttcagccccctctatctcaaggtttactctgaatcgaggtctatatttattgtaaaag 18535164  T
Q  100 aatccctcatagattggaacaaaatcaggccca 132  Q
     |||||||||| |||||||||||||||||||||    
T  18535165 catccctcataaattggaacaaaatcaggccca 18535197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6132968 - 6132866
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||| ||||||||||||||||| |||||| |||||||||| |||||  ||||||||||| |||||| | ||||||| | |||||||||||||||||||    
T  6132968 atacaagccctagttttgttgttgcctttctgaacccttgtt-cagcctcctctatctcaatgtttacaccgatacaatgtctatatttatagtaaaaga 6132870  T
Q  101 atcc 104  Q
    ||||    
T  6132869 atcc 6132866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37089608 - 37089709
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc---aaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||    |||||||  ||||||||| | ||||||||||||||||    
T  37089608 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctctcaagtttagcctgatacaaggtctatatttatagtaaa 37089707  T
Q  98 ag 99  Q
    ||    
T  37089708 ag 37089709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24348314 - 24348212
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||||   |||||||| | |||||||||||||||    
T  24348314 atacaaaccttagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcttgatacaaggtctatatttatagtaa 24348215  T
Q  97 aag 99  Q
    |||    
T  24348214 aag 24348212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38409301 - 38409197
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta------tctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||| |||||      ||||||||||| ||||||||||| | |||||||||||||    
T  38409301 atacaaaccctagttttgttgttgcctttttaaaccattgtttcagccccctctatctccctctcaaagtttgctctgatacaaggtctatatttatagt 38409202  T
Q  95 aaaag 99  Q
    |||||    
T  38409201 aaaag 38409197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19322792 - 19322701
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatag 93  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||   ||||||||||||    
T  19322792 atacaaaccctagttttcttgttgactt-ctaaacccttgtttcatccccctctatctcaaggtttactctgatacaagatctatatttatag 19322701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11006474 - 11006532
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  11006474 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 11006532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11008803 - 11008861
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  11008803 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 11008861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18709400 - 18709458
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  18709400 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 18709458  T

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Target: chr4; HSP #66
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 296
Target Start/End: Complemental strand, 19095784 - 19095699
Alignment:
Q  210 aagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||| ||| ||||||||||||||||||||||||| | |||||||||||    
T  19095784 aagtgtcaattctgctccaaaag-tcgtgctccgattttgacaacttcagcaaacttcaatttctccaattttaaatcactttcaca 19095699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8756487 - 8756585
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||| |||| |||| |||||| ||| |||||||||||||| ||||||  |||||||||| |||||||||||||||| | ||||||||||||||||||    
T  8756487 atacaaatcctaattttcttgttgactt-ctaaacccttgttttcagccccttctatctcaaggtttactctgatacaaggtctatatttatagtaaaag 8756585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22132627 - 22132734
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcc---------ctctctatctcaaagtttactctgatacaaagcctatatttat 91  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||         |||||| ||||||||||||  ||||||||| | ||||||||||    
T  22132627 atacaaacccaagttttgttgttgcctttctaaacccttgtttcagcccctctatctctctctctctcaaagtttagcctgatacaaggtctatatttat 22132726  T
Q  92 agtaaaag 99  Q
    ||||||||    
T  22132727 agtaaaag 22132734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22134852 - 22134909
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  22134852 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccc-ctctatctc 22134909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 16186079 - 16186180
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttc-agccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    |||||||||||| |||||| | |||||||||||||||||  ||||| |||| |||||| |||||||||||||||| |  ||||||||||||||||| |||    
T  16186079 aaaccctagttt-gttgtt-tgtttctaaacccttgtttttagccccctctctctcaaggtttactctgatacaaggtttatatttatagtaaaagtatc 16186176  T
Q  104 cctc 107  Q
    ||||    
T  16186177 cctc 16186180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 12396348 - 12396402
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||    
T  12396348 cgattttgacagcttcagcaaacttgaatttctccaattttgagtaactttcaca 12396402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 13543908 - 13543811
Alignment:
Q  198 ttttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||| ||||| ||||||| |||||||  || ||||| ||||| ||||||||||||||| | || |||| ||||||||||||||||||||| |||||||    
T  13543908 ttttacgaatgaaagtgcctattctgcaacataaaattgtgctccgattttgacagcttcaacatactt-aatttctccaattttgagtcattttcaca 13543811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22780610 - 22780668
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||    
T  22780610 atacaaaccctagttttgttgttgcttttctaaacccctgtttcagccccctctatctc 22780668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22782975 - 22783033
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||    
T  22782975 atacaaaccctagttttgttgttgcttttctaaacccctgtttcagccccctctatctc 22783033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3824807 - 3824908
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaag-tttactctgatacaaagcctatatttatagta 95  Q
    ||||||||||||||||||||||||  ||||||||||  ||||||||||| |||||    ||||||||   ||||||||||||| | ||||||||||||||    
T  3824807 atacaaaccctagttttgttgttgcttttctaaacc--tgtttcagccccctctatctctctcaaagaaatactctgatacaaggtctatatttatagta 3824904  T
Q  96 aaag 99  Q
    ||||    
T  3824905 aaag 3824908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 16455356 - 16455285
Alignment:
Q  28 ttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||| || ||||||   |||| ||||||||||||||||||||| |||| |||||    
T  16455356 ttctaaacccttgtttcagccccctttatctctcggtttgctctgatacaaagcctatattaatagcaaaag 16455285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 138
Target Start/End: Complemental strand, 36380417 - 36380333
Alignment:
Q  54 tatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcat-agattggaacaaaatcaggcccaaaaata 138  Q
    |||||||| |||||||||||||||||| | |||||||||||||||| | ||||||| | |||| ||| ||||| ||||||||||||    
T  36380417 tatctcaaggtttactctgatacaaagtccatatttatagtaaaagtaaccctcataaaattgtaac-aaatctggcccaaaaata 36380333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 12102182 - 12102064
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgttt-cagccctc-tctatctcaaagtttactctgatacaaagcctatatttatagtaaaag-aa 101  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||| | |||||||||| ||||  ||||||||||   |||||||||||||||||| ||    
T  12102182 aaaccctagttt-gttgtt-tgtttctaaacccttgttttcagcccccctctatctcaaggttttatctgatacaagatctatatttatagtaaaagaaa 12102085  T
Q  102 tccctcatagattggaacaaa 122  Q
    ||||| | | |||||||||||    
T  12102084 tccctaaaaaattggaacaaa 12102064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 296
Target Start/End: Original strand, 18535251 - 18535334
Alignment:
Q  210 aagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||||||||||| ||| ||||| |||| || ||||||||||||||| ||  |||| |||||||| |||| ||||||||||||||||    
T  18535251 aagtgccaattctactctaaaaa-tcgtactccgattttgacagctttag--aactccaatttcttcaatattgagtcactttcaca 18535334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 18537974 - 18538026
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||    
T  18537974 cgattttgacagcttcag--aacttcaatttcttcaattttgagtcactttcaca 18538026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 52043714 - 52043820
Alignment:
Q  49 ctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaaatcaggccc--aaaaatacgttcta 145  Q
    |||||| |||||| |||||| |||||||||| | |||||||||||||||||| |||||| | | |||||||||||   | ||||  ||||||||||| ||    
T  52043714 ctctctctctcaaggtttacatctgatacaaggtctatatttatagtaaaagcatccctaaaaaattggaacaaatctaagcccataaaaatacgtttta 52043813  T
Q  146 tttttat 152  Q
    |||||||    
T  52043814 tttttat 52043820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 296
Target Start/End: Original strand, 33415978 - 33416016
Alignment:
Q  258 agcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  33415978 agcaaatttcaatttctccaattttgagtcactttcaca 33416016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 33415915 - 33415952
Alignment:
Q  210 aagtgccaattctgctccaaaaaatcgtgcttcgattt 247  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  33415915 aagtgccaattctgctccaaaaaatcgtgctccgattt 33415952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 25357683 - 25357627
Alignment:
Q  51 ctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctc 107  Q
    |||| |||||| ||||||| |||||||| | |||||||||||||||||| |||||||    
T  25357683 ctctctctcaaggtttactttgatacaaggtctatatttatagtaaaagtatccctc 25357627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 28453780 - 28453676
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaagaa 101  Q
    ||||||||||||||  ||||| ||| |||||||||||||| ||| | |||||| ||||| ||| || |||||||||| | |||||||||||||||||  |    
T  28453780 caaaccctagttttagtgttggctt-ctaaacccttgttttcagac-tctctacctcaaggttcacatctgatacaaggtctatatttatagtaaaaata 28453683  T
Q  102 tccctca 108  Q
    |||||||    
T  28453682 tccctca 28453676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 40999185 - 40999281
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||| |||||||||| |||||| | | |||||||||||||| ||| | |||||| ||||| ||||||||||||| || |  ||||||||||||||||    
T  40999185 atacaacccctagttttcttgttgacgt-ctaaacccttgttttcagac-tctctacctcaaggtttactctgatataaggtttatatttatagtaaaa 40999281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 9863806 - 9863712
Alignment:
Q  2 tacaaaccctagtttt-gttgttgtctttctaaacccttgttt--cagccctct-ctatctcaaagtttactctgatacaaagcctatatttatag 93  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||  |||| |||| ||||||||| ||||  |||||||||| | ||||||||||||    
T  9863806 tacaaaccctagtttttgtttttggctt-ctaaacccttgtttttcagctctctactatctcaaggtttcatctgatacaaggtctatatttatag 9863712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 2e-83; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 16092437 - 16092741
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctca---aagtttac-tctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||    |||||||| |||||||||||| |||||||| ||||||    
T  16092437 atacaaaccctaattttgttgttgcctttctaaacccttgtttcaaccccctctatctctcacaagtttacatctgatacaaagtctatatttctagtaa 16092536  T
Q  97 aagaatccctcatagattggaacaaaatcaggcccaaaaa--tacgttctatttttatgact--gcgcaaaatcgtactccgattttgccataccgtgct 192  Q
    |  ||||||||||| |||||||| |||||||||||| |||  |||||| |||||||||||||  |||| |||||||||||||||||||||| | ||||||    
T  16092537 agcaatccctcataaattggaaccaaatcaggcccataaaactacgttttatttttatgactctgcgccaaatcgtactccgattttgccagatcgtgct 16092636  T
Q  193 ccgaatttt-atgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactt 291  Q
    |||| |||| | ||||| |||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  16092637 ccgattttttacgaatgaaagtgccaattctgcttcgaaaaatcgtgctccgattttgacagcttcagcaaacttcaatttctccaattttgagtcagtt 16092736  T
Q  292 tcaca 296  Q
    |||||    
T  16092737 tcaca 16092741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 31472850 - 31473147
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||| || |||||| | | ||||||||||||||||     
T  31472850 atacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctcaaggtttacactaatacaatgtccatatttatagtaaaagc 31472949  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttatgactgcgcaaaatcgtactccgattttgccataccgtgctccga-a 197  Q
    |||||||||| |||||||| |||||||||||  |||||||| || | ||| |    |||||| ||||||| |||||| ||||||| | ||||||||||      
T  31472950 atccctcataaattggaaccaaatcaggcccataaaaatactttatttttattcttctgcgcgaaatcgtgctccgactttgccagatcgtgctccgatt 31473049  T
Q  198 ttttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||| ||||| | |||||||||||||||| | |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  31473050 ttttaagaatgaatgtgccaattctgctcc-ataaatcgtgctccgattttgacagcttcagcaaacttcaatttctccaattttaaatcactttcaca 31473147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 25904145 - 25903894
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | ||||||||||||||||||     
T  25904145 atacaatccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagc 25904046  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||| ||||| |||| ||| |||| ||||||  ||||||||||| |||||||||    |||||| ||||||| |||||||||||||| | ||||||||||    
T  25904045 atccttcataaattgaaaccaaattaggcccataaaaatacgttttatttttattcttctgcgcgaaatcgtgctccgattttgccagatcgtgctccga 25903946  T
Q  197 -attttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattt 247  Q
      ||||||||||  ||||| |||||||||||| ||||||| |||| ||||||    
T  25903945 ttttttatgaataaaagtgtcaattctgctccgaaaaatcatgctccgattt 25903894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17072925 - 17072822
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  17072925 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaaga 17072826  T
Q  101 atcc 104  Q
    ||||    
T  17072825 atcc 17072822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25921710 - 25921808
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  25921710 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 25921808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20043092 - 20042989
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  20043092 atacaaaccctagttttgttgttgcctttctaaacacttgtttcagccccctctatctcaaggtttgctatgatacaaagcctatatttatagtaaaaga 20042993  T
Q  101 atcc 104  Q
    ||||    
T  20042992 atcc 20042989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21948068 - 21947971
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  21948068 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc-ctctatctcaaaatttactctgatacaaggtctatatttatagtaaaag 21947971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 1189846 - 1190034
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttac-tctgatacaaagcctatatttatagta 95  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||| |||||    |||||| |||||| |||||||||| | ||||||||||||||    
T  1189846 atacaaaccgtagttttgttgttgcctttctaaactcttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagta 1189945  T
Q  96 aaag-aatccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgatttt 179  Q
    |||| ||||||||||| |||||||| |||||||||||  ||||||||||| |||||||||    |||| ||||||||| ||||||||||    
T  1189946 aaagcaatccctcataaattggaaccaaatcaggcccataaaaatacgttttatttttattcttctgcccaaaatcgtgctccgatttt 1190034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20045052 - 20044949
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  20045052 atacaaaccctagttttgttgttgctttcctaaacccttgtttcagccccctctgtctcaaggtttgctctgatacaaagcctatatttatagtaaaaga 20044953  T
Q  101 atcc 104  Q
    ||||    
T  20044952 atcc 20044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 296
Target Start/End: Complemental strand, 36208617 - 36208301
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||| ||||||||||| |||||||||||||||| | |||||||||||||||||| |||    
T  36208617 aaaccctagttt-gttgtt-tgtttctaaacccttgttttcagccccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagcatc 36208520  T
Q  104 cctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga-at 198  Q
    ||||  | ||||||||||||||||||||  ||||||| ||| |||||||||     ||||| ||||| | |||||||||||||| | ||||||| ||  |    
T  36208519 cctcgcaaattggaacaaaatcaggcccataaaaatatgttttatttttattcttttgcgcgaaatcatgctccgattttgccagatcgtgctctgattt 36208420  T
Q  199 tttatgaat-gtaagtgccaattctgctccaa--------------------aaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctcca 277  Q
    |||| |||| | ||||| ||||| ||||||||                    ||||||||||| ||||||||||||||| |||||||||||||||| |||    
T  36208419 tttacgaatggaaagtgtcaattttgctccaaaaattgtactccaatttttcaaaatcgtgctccgattttgacagcttcagcaaacttcaatttcacca 36208320  T
Q  278 attttgagtcactttcaca 296  Q
    ||||| |||||||||||||    
T  36208319 attttaagtcactttcaca 36208301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2174961 - 2174863
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||| |||||||||||||||    
T  2174961 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctgtatttatagtaaaag 2174863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2818573 - 2818671
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  2818573 atacaaaccatagttttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12556160 - 12556258
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  12556160 atacaaactctagttttgttgttgtcattctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 12556258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31542777 - 31542679
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| || |||||||| | ||||||||||||||||||    
T  31542777 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 31542679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 24126898 - 24126795
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||| |||||| |||||| || | |||||||||||||||||||    
T  24126898 atacaaaccctagttttgttgttgtctttctaaactcttgtttcagccccatctatctcaaggtttacactgatataatgtctatatttatagtaaaaga 24126799  T
Q  101 atcc 104  Q
    ||||    
T  24126798 atcc 24126795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 34530903 - 34531006
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||| |||||||||    
T  34530903 atacaaaccctagttttgttgttgcatttctaaacacttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttacagtaaaaga 34531002  T
Q  101 atcc 104  Q
    ||||    
T  34531003 atcc 34531006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31179608 - 31179706
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||| || |||||||| | ||||||||||||||||||    
T  31179608 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagctccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaag 31179706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31545122 - 31545024
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||| || |||||||| | ||||||||||||||||||    
T  31545122 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 31545024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39854525 - 39854428
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  39854525 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccc-ctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 39854428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 41585946 - 41586056
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||||| ||     
T  41585946 caaaccctagttttgttcttgttattctaaacccttgtttcagccccctttatctcaaggtttactctgatacaaaacctatatttatagtaaaagtata 41586045  T
Q  104 cctcatagatt 114  Q
     ||||||||||    
T  41586046 actcatagatt 41586056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38882148 - 38882049
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcag-ccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  38882148 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 38882049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4236671 - 4236573
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||| || |||||| |||||| ||||||||||| | ||||||||||||||||||    
T  4236671 atacaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaag 4236573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20507699 - 20507797
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||| || |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||    
T  20507699 atacaaaccttaatttttttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaagatctatatttatagtaaaag 20507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40221564 - 40221466
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||||||  ||| | ||||||||||||||||||    
T  40221564 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctcaaggtttactctgagtcaatgtctatatttatagtaaaag 40221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18509555 - 18509652
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcag-ccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| | |||||||||||| |||||||||| | ||||||||||||||||    
T  18509555 atacaaaccctagttttgttgttgtcattctaaacccttgtttcagcccctctatctctcaaagtttagtctgatacaaggtctatatttatagtaaa 18509652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 2954456 - 2954368
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttat 91  Q
    ||||||||||||||||||| |||||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||||||||||||    
T  2954456 acaaaccctagttttgttgctgtctttctaaacccttgtttcatactcctctatctcaaagtttacactgatacaaagcctatatttat 2954368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10474560 - 10474663
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||| |||| |||||| ||||||||| | ||||||||||||||| |||    
T  10474560 atacaaaccctagatttgttgttgcctttctaaatccttgtttcagccccctctatttcaaggtttacactgatacaatgtctatatttatagtaagaga 10474659  T
Q  101 atcc 104  Q
    ||||    
T  10474660 atcc 10474663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16776200 - 16776101
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctata-tttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||| ||| ||||||| | ||||| |||||||||||||    
T  16776200 atacaaaccctagttttgttgttgcctttgtaaacccttgtttcagccccctctatctcaaagtttgctcagatacaaggtctatattttatagtaaaag 16776101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18511449 - 18511547
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||  |||||||||||| |||||||||| | ||||||||||| ||||    
T  18511449 atacaaaccctagttttgttgttgtcattctaaacccttgtttcagccccctctatctctcaaagtttagtctgatacaaggtctatatttatattaaa 18511547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 26097772 - 26097677
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||| | ||||||||| || ||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  26097772 caaaccctagttttgttgttgccattctaaacctttatttcagccccctctatctcaaagtttactctgattcaaggtctatatttatagtaaaag 26097677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 39398230 - 39398332
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| | | ||||| |  ||||||||||||||||||    
T  39398230 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccc-ctctatctcaaggtttacaccggtacaatgtttatatttatagtaaaaga 39398328  T
Q  101 atcc 104  Q
    ||||    
T  39398329 atcc 39398332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 10529344 - 10529434
Alignment:
Q  9 cctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  10529344 cctagttttgttgttgcctttctaaacccttgtttcaacccactctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 10529434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36402565 - 36402663
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||| ||  ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| || | ||||||||||||||||||    
T  36402565 atacaaaccctagtttcgtgattgtcattctaaacccttgtttcagccccctctatctcaacgtttactctgatataaggtctatatttatagtaaaag 36402663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 695931 - 695830
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| || |||||||| |||||| || |||||| | ||||||| |||||||||||    
T  695931 atacaaaccctagttttgttgttgcctttctaaacccttgtttcatccccctttatctcaaggtttacactcatacaatgtctatattcatagtaaaaga 695832  T
Q  101 at 102  Q
    ||    
T  695831 at 695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 4410101 - 4410001
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||| ||||||||||| | ||||||||||||| |||    
T  4410101 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtgaaa 4410002  T
Q  99 g 99  Q
    |    
T  4410001 g 4410001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18596687 - 18596591
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||| ||||||| ||| |||||||||||| ||| | ||||||||||||||||||    
T  18596687 atacaaaccctagttttgttgttgtctttata--cccttgtttcagccccctctatcccaaggtttactctgattcaaggtctatatttatagtaaaag 18596591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 18466723 - 18466625
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||||  ||||||||| | |||||||||||||||||    
T  18466723 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 18466625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18469053 - 18468951
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||||   |||||||| | |||||||||||||||    
T  18469053 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttatcatgatacaaggtctatatttatagtaa 18468954  T
Q  97 aag 99  Q
    |||    
T  18468953 aag 18468951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6756536 - 6756438
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||| | ||||||||   ||||||| ||||||||||    
T  6756536 atacaaaccttagttttgttgttgcctttctaaaccattgtttcagctccctctatctcaaagtttaatatgatacaagatctatattaatagtaaaag 6756438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26098488 - 26098586
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||| || |||||| | |||||||||||| ||||||||| ||||||||| | |||||||||||| ||| | ||||||||||||||||||    
T  26098488 atacaaaccctagtcttcttgttgccattctaaacccttatttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 26098586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37706017 - 37706115
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||| ||||| |||| ||||||||||| || ||||||||| ||||||||||| |||||| ||||||||| | |||||||||||| |||||    
T  37706017 atacaaaccctagatttgtcgttgcctttctaaacctttatttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaag 37706115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 1190086 - 1190151
Alignment:
Q  231 aaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1190086 aaatcgtgctccaattttgacagcttcagcaaacttcaatttctccaattttgagtcactttcaca 1190151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6661420 - 6661512
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    ||||| |||||| |||| |||||| ||| |||||||||||||||| ||||||||||||||| |||||||||||||||| | |||||||||||||    
T  6661420 atacataccctaattttcttgttgactt-ctaaacccttgtttcaaccctctctatctcaaggtttactctgatacaaggtctatatttatagt 6661512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27912578 - 27912474
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |      ||||| ||||||||||||  ||||||||| | |||||||||||||    
T  27912578 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagcaccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagt 27912479  T
Q  95 aaaag 99  Q
    |||||    
T  27912478 aaaag 27912474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17818727 - 17818817
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttata 92  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||||| |||| |||||| |||||| ||||||||| | |||||||||||    
T  17818727 atacaaactctagttttgttgttgcctttctaaactcttgtttcagccc-ctctttctcaaggtttacactgatacaatgtctatatttata 17818817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31466215 - 31466313
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||| |||   ||| |||||| ||||||||||||  | |||||||||||||| |||||||||| | ||||||||||||||||||    
T  31466215 atacaaaccctagttttgtcgttacttttttaaacctttgtttcagccccttttatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 31466313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34477291 - 34477349
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  34477291 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 34477349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34479656 - 34479714
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  34479656 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 34479714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 10586882 - 10586783
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagcc---ctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||   || ||| ||||||||||||  ||||||||| | ||||||||||||||||||    
T  10586882 acaaactctagttttgttgttgccattctaaacccttgtttcagcccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaag 10586783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21684688 - 21684746
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  21684688 atacaaaccctagttttgttgttgcctttttaaacccttgtttcagccccctctatctc 21684746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27910492 - 27910389
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||      ||||| ||||||||||||  ||||||||| | |||||||||||||    
T  27910492 atacaaaccctagttttgttgttgcctttttaaa-ccttgtttcagcccccgctatctctctctcaaagtttaacctgatacaaggtctatatttatagt 27910394  T
Q  95 aaaag 99  Q
    |||||    
T  27910393 aaaag 27910389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 9020235 - 9020082
Alignment:
Q  32 aaacccttgttt-cagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaaatcaggc 129  Q
    |||||||||||| |||| | ||||| | ||| |||||| |||||||||| |  | ||||||||||||||  ||| |||||| |||||||||||||||| |    
T  9020235 aaacccttgttttcagctccctctagcacaaggtttacatctgatacaaggtatgtatttatagtaaaaacatctctcataaattggaacaaaatcagac 9020136  T
Q  130 cc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgatttt 179  Q
    ||  ||||||| ||| |||||||||    |||||||||||||||||||||||||    
T  9020135 ccataaaaatatgttttatttttattgttctgcgcaaaatcgtactccgatttt 9020082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6747348 - 6747290
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  6747348 atacaaactctagttttgttgttgcttttctaaacccttgtttcagccccctctatctc 6747290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15552287 - 15552229
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| || |||||||||    
T  15552287 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagtcccctctatctc 15552229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25804067 - 25804009
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||||    
T  25804067 atacaaaccctagttttgttgttgccattctaaacccttgtttgagccccctctatctc 25804009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 42770785 - 42770694
Alignment:
Q  32 aaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcat-agattggaacaaa 122  Q
    |||||||||||| ||| || ||||||||||| |||||||| |||||||||  ||||||||||||||||| ||||||||| | |||||||||||    
T  42770785 aaacccttgttttcagtcccctctatctcaaggtttactc-gatacaaagtttatatttatagtaaaagtatccctcataaaattggaacaaa 42770694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21288806 - 21288715
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttata 92  Q
    |||||||||||| |||| ||||||   |||||||||||| ||||| ||| ||||||||||| ||||||||| || ||| | |||||||||||    
T  21288806 atacaaaccctatttttattgttgctattctaaacccttatttcaaccccctctatctcaaggtttactctaattcaaggtctatatttata 21288715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6745111 - 6745053
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||| || ||||||    
T  6745111 atacaaaccctagttttgttgttgcttttctaaacacttgtttcagccccctttatctc 6745053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 2723959 - 2723906
Alignment:
Q  51 ctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||||||||    
T  2723959 ctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcc 2723906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 2144876 - 2144936
Alignment:
Q  49 ctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaagaatccctca 108  Q
    |||||| |||||| |||||| |||||||||| | |||||||||||||||||| ||||||||    
T  2144876 ctctctctctcaaggtttacatctgatacaaggtctatatttatagtaaaagtatccctca 2144936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 29748334 - 29748262
Alignment:
Q  51 ctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaa 122  Q
    |||| ||| ||||||||| |||||||||| | |||||||||||||||||| |||||||| |  ||||||||||    
T  29748334 ctctctctaaaagtttacatctgatacaaggtctatatttatagtaaaagcatccctcaaaatttggaacaaa 29748262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 3373327 - 3373376
Alignment:
Q  50 tctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||| |||||||||||| || |||||||| | ||||||||||||||||||    
T  3373327 tctcaatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 3373376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 20053837 - 20053793
Alignment:
Q  82 ctatatttatagtaaaagaatccctcatagattggaacaaaatca 126  Q
    ||||||||| | |||||| || |||||||||||||||||||||||    
T  20053837 ctatatttacaataaaagcatgcctcatagattggaacaaaatca 20053793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 8e-83; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 32447553 - 32447803
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32447553 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttatagtaaaaga 32447652  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccga-a 197  Q
    |||| || || |||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||| ||| | ||||||||||      
T  32447653 atccatcgtaaattgaaacaaaatcaggcccaaaaatacgttttatttttatgactctgcgcaaaatcgtactccaatttttccagatcgtgctccgatt 32447752  T
Q  198 ttttatgaatgtaagtgccaatt-ctgctccaaaaaatcgtgcttcgattt 247  Q
    ||||| ||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  32447753 ttttacgaatgaaagtgccaattcctgctccaaaaaatcatgctccgattt 32447803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 3390456 - 3390205
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| |||||  ||||||||| | ||||||||||||||||||     
T  3390456 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccgtctatctcaaggtttatactgatacaatgtctatatttatagtaaaagt 3390357  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    ||| |||||| |||||||| |||||||||||  ||||||||||| ||| |||||    |||||| |||| || |||||||||||||| | |||||||| |    
T  3390356 atctctcataaattggaaccaaatcaggcccataaaaatacgttttatatttattcttctgcgcgaaattgtgctccgattttgccagatcgtgctccaa 3390257  T
Q  197 -attttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattt 247  Q
      ||||| || || ||||||||||||||||| | |||||| |||| ||||||    
T  3390256 ttttttacgattgaaagtgccaattctgctctagaaaatcatgctccgattt 3390205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 3233968 - 3234147
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| || |||||| ||||||| ||| ||||||||||||||||||     
T  3233968 atacaaaccttagttttgttgttgtctttctaaatccttgtttcagccccctctatcttaaggtttacactgatac-aagtctatatttatagtaaaagc 3234066  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgatttt 179  Q
    |||| ||||| |||||||||||||||||||||||||||||||   ||||| |||  |||| ||||||||| ||||||||||    
T  3234067 atccttcataaattggaacaaaatcaggcccaaaaatacgtttagtttttctgactctgcacaaaatcgtgctccgatttt 3234147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13057271 - 13057168
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  13057271 atacaaaccctagttttgttcttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaaga 13057172  T
Q  101 atcc 104  Q
    ||||    
T  13057171 atcc 13057168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 24338688 - 24338787
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | ||||||||||||||||||||||    
T  24338688 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatc 24338787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15532918 - 15533016
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  15532918 atacaaaccctagttttgttgttacctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15533016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15541377 - 15541475
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  15541377 atacaaaccctagttttgtttttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15541475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17852619 - 17852521
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  17852619 atacaaactctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaag 17852521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 25477347 - 25477248
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | ||||||||| |||||||||||||    
T  25477347 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaatcc 25477248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1072114 - 1072212
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  1072114 atacaaacactagttttgttgttgcctttctaaacccttgtttcagctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaaag 1072212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1230486 - 1230584
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||||| | ||||||||||||| ||||    
T  1230486 atacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccctctctatctcaaagtttgctatgatacaaggtctatatttatagtgaaag 1230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12195752 - 12195850
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||| || |||||||| | ||||||||||||||||||    
T  12195752 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 12195850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14507412 - 14507510
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| |||| |||||| | ||||||||||||||||||    
T  14507412 atacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaag 14507510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28241558 - 28241656
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||| ||||    
T  28241558 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaag 28241656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3632175 - 3632278
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | | ||||||||||| |||||| ||||||||| | |||||||||||||||| ||    
T  3632175 atacaaaccctagttttgttgttgcctttctaaacccttgtttcaactccctctatctcaaggtttacactgatacaatgtctatatttatagtaaacga 3632274  T
Q  101 atcc 104  Q
    ||||    
T  3632275 atcc 3632278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 13870663 - 13870761
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||  ||||||||||    
T  13870663 aaaccctagttttgttgttgcctttctaaacccttatttcagccc-ctctatctcaaggtttgctctgatacaaagcctatatttatataaaaagaatcc 13870761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14459002 - 14459093
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttata 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||||| | |||||||||||    
T  14459002 atacaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctcaaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8995556 - 8995458
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||  |||||||||||||||||   ||||||||||||||||||    
T  8995556 atacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaag 8995458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9020003 - 9019905
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||  |||||||||||||||||   ||||||||||||||||||    
T  9020003 atacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaag 9019905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11983266 - 11983364
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  11983266 atacaaaccctagttttgttgttgcctttctaagcctttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 11983364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19227645 - 19227743
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||| |||||||||||   ||||||||||||||||||    
T  19227645 atacaaaccctagttttgttgttgcctttctaaacccttgtttgagccccctttatctcaaagtttgctctgatacaagatctatatttatagtaaaag 19227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30729065 - 30729163
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||||   ||||||||||||||||||    
T  30729065 atacaaacccaagttttgttgttgtctttcgatacccttgtttcagccccctctatctcaaggtttactctgatacaagatctatatttatagtaaaag 30729163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 14466408 - 14466307
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaat 102  Q
    |||||| ||||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| ||| |||||||| |||||| ||||||||||||||    
T  14466408 acaaactctagttttgctgttgtctttctaaactcttgtttcaaccctctctatctcaaggtttattctaatacaaagtctatatctatagtaaaagaat 14466309  T
Q  103 cc 104  Q
    ||    
T  14466308 cc 14466307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 15346441 - 15346344
Alignment:
Q  28 ttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaaatc 125  Q
    ||||||||||||| |||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||    
T  15346441 ttctaaacccttggttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatccctcataaattggaacaaaatc 15346344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 3630101 - 3630204
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||| |||||||||||  |||||  |||||||| | |||||||||||||||||||    
T  3630101 atacaaaccctagttttgttgttgcctttctaaaccgatgtttcagccccctctatctcaagttttacattgatacaatgtctatatttatagtaaaaga 3630200  T
Q  101 atcc 104  Q
    ||||    
T  3630201 atcc 3630204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 15530359 - 15530457
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||||| |||||||||  ||||||||||||||||| | ||||||||||||||||||    
T  15530359 atacaaaccctagttttgttgttgccattctaagcccttgcttcagccccctctatctcccagtttactctgatacaaggtctatatttatagtaaaag 15530457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12161792 - 12161894
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| || |||||||| ||||||  |||||||| | ||||||||| |||||||||    
T  12161792 atacaaaccctagttttgttgttgcatttctaaacccttgtttcagccc-ctttatctcaaggtttacaatgatacaatgtctatatttaaagtaaaaga 12161890  T
Q  101 atcc 104  Q
    ||||    
T  12161891 atcc 12161894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13039831 - 13039728
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||  || |||||||| |||||| |||||||||   |||||||||||||||||||    
T  13039831 atacaaacccaagttttgttcttgcctttctaaacccttgtttcagcctcctatatctcaaggtttacactgatacaatatctatatttatagtaaaaga 13039732  T
Q  101 atcc 104  Q
    ||||    
T  13039731 atcc 13039728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 3396163 - 3396098
Alignment:
Q  231 aaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3396163 aaatcgggcttcgattttgacagcttcagcaaacttcaatttctccaattttgagtcactttcaca 3396098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 296
Target Start/End: Complemental strand, 26945201 - 26944929
Alignment:
Q  27 tttctaaacccttgttt-cagccctctctatctcaaagtttactc-tgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaaat 124  Q
    ||||||||||||||||| | |||| || |||||||| |||||  | |||||||| |  ||||||||||||||||| || ||||||| |||||||||||||    
T  26945201 tttctaaacccttgttttcggccccctatatctcaaggtttatacctgatacaaggtttatatttatagtaaaagcattcctcataaattggaacaaaat 26945102  T
Q  125 caggccc--aaaaatacgttctatttttatgactgcgcaaaatcgtactccgattttgccataccgtgctccga-attttatgaat-gtaagtgccaatt 220  Q
    |||||||  |||| ||  || ||||| |    ||||||||||| ||||| ||||||||| | | ||| ||||||  ||||| |||| | |||| ||||||    
T  26945101 caggcccataaaattatattttatttatgcttctgcgcaaaattgtacttcgattttgcgagatcgtactccgattttttacgaatgggaagttccaatt 26945002  T
Q  221 ctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    || ||  |||||||||| || ||||||||||||| | ||  |||| |||||||| |||||||||||||||||||||    
T  26945001 cttct-aaaaaaatcgtactccgattttgacagcatcag--aactccaatttcttcaattttgagtcactttcaca 26944929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 19704806 - 19704905
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||      ||||| ||||||||||| ||||||||||| | |||||||||||||    
T  19704806 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctccatctctctctcaaagtttgctctgatacaaggtctatatttatagt 19704905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22490717 - 22490613
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaa-cccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||| |||||| || || ||| | |||||||||| |||||||    
T  22490717 atacaaaccctagttttgttgttgcctttcaaaaacccttgtttcagccccctctatctcaaggtttacactaattcaatgtctatatttatggtaaaag 22490618  T
Q  100 aatcc 104  Q
    |||||    
T  22490617 aatcc 22490613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2629122 - 2629225
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc-----tctctatctcaaagtttactctgatacaaagcctatatttatagta 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||     ||||| ||||||||||||   |||||||| | ||||||||||||||    
T  2629122 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccctctatctctctctcaaagtttaacatgatacaaggtctatatttatagta 2629221  T
Q  96 aaag 99  Q
    ||||    
T  2629222 aaag 2629225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32280073 - 32279976
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||| |||||||| | |||||| ||||| |||||    
T  32280073 atacaaaccctagatttgttgttgcctttttaaacccttgtttcagccc-ctctatctccaagtttactatgatacaaggtctatatatataggaaaag 32279976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 30967278 - 30967177
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc----aaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    ||||||||  || |||||| | |||||||||||||||    
T  30967278 atacaaaccatagttttgttgttgtctttctaaacccttgtttcagccccctctatctctctcaaagtttagcct-atacaaggtctatatttatagtaa 30967180  T
Q  97 aag 99  Q
    |||    
T  30967179 aag 30967177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4816468 - 4816526
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  4816468 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 4816526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20915593 - 20915693
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaa--agtttactctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||    | ||||  ||||||||| | |||||||||||||||||    
T  20915593 atacaaatcctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaatttagcctgatacaaggtctatatttatagtaaaa 20915692  T
Q  99 g 99  Q
    |    
T  20915693 g 20915693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 3234146 - 3234242
Alignment:
Q  198 ttttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcac 295  Q
    ||||| ||||| ||||| ||||||| |  || |||||||  || ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  3234146 ttttacgaatgaaagtgtcaattctacaacataaaatcggactccgattttgacagcttcagcaaact-caatttctccaattttgagtcactttcac 3234242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30034840 - 30034942
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc----aaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||| ||| ||||||||||| |||||||||||||||||| ||| | |||||||||    ||||||||  ||||||||| | |||||||||||||||    
T  30034840 atacaaactctaattttgttgttgcctttctaaacccttgttttagctccctctatctctcttaaagtttagcctgatacaaggtctatatttatagtaa 30034939  T
Q  97 aag 99  Q
    |||    
T  30034940 aag 30034942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 142
Target Start/End: Complemental strand, 15367086 - 15366971
Alignment:
Q  35 cccttgtttcagccctctctatctcaaagtttac-------tctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaa--atc 125  Q
    |||||| |||||||| ||||||||||| ||||||       |||||||||| | |||||||||||||||||| |||||||||| |||||||||||  |||    
T  15367086 cccttggttcagccccctctatctcaaggtttacaccgatgtctgatacaatgtctatatttatagtaaaagtatccctcataaattggaacaaaatatc 15366987  T
Q  126 aggcccaaaaatacgtt 142  Q
    | |||||||||||||||    
T  15366986 a-gcccaaaaatacgtt 15366971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 3390189 - 3390135
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  3390189 cgattttgacagcttctgtaaacttcaatttctccaattttgagtcactttcaca 3390135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 15719480 - 15719426
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  15719480 cgattttgacagattcagcaaactttaatttctccaattttgagtcactttcaca 15719426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26065063 - 26065005
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  26065063 atacaaactctagttttgttgttgccattctaaacccttgtttcagccccctctatctc 26065005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26085032 - 26084974
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  26085032 atacaaactctagttttgttgttgccattctaaacccttgtttcagccccctctatctc 26084974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 19696519 - 19696365
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctc--tctatctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    |||||||||||| ||| |||||| | ||||||||||||||||| ||||||||  ||| |||||| ||||  ||  |||||| | ||||||||||||||||    
T  19696519 atacaaaccctaattt-gttgtt-tgtttctaaacccttgttttcagccctccctctctctcaaggtttcatcatatacaaggtctatatttatagtaaa 19696422  T
Q  98 agaatccctcatagattggaacaaa-atcaggcccaaaaatacgttctatttttatg 153  Q
    ||||||| ||| | |||||||||||  ||| ||  ||||||||||| ||||||||||    
T  19696421 agaatccttcaaaaattggaacaaatctcacgcataaaaatacgttttatttttatg 19696365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 10584198 - 10584100
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||| |||||||||||||||  ||| |||||| ||||||     | ||||||||||| |||||| ||||||||| |  ||||||||||||||||||    
T  10584198 atacaaactctagttttgttgttgcttttataaacctttgttt-----ccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaaga 10584104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 296
Target Start/End: Original strand, 32447821 - 32447872
Alignment:
Q  245 ttttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  32447821 ttttgacagcttcaacaaacttaaatttctccaattttgagtcactttcaca 32447872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3028088 - 3028185
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||| |||| ||| | |||||||||||| ||||||  | |||||||  ||||||| |||||||| | ||||||||||||||||||    
T  3028088 atacaaaccctagttttgt-gttgccttcc-aaacccttgttttcagccccttttatctcatggtttactttgatacaaggtctatatttatagtaaaag 3028185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26932799 - 26932857
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||| |||  ||||||| ||||||||||| ||| |||||||||    
T  26932799 atacaaaccctagttttgttattgcttttctaagcccttgtttcaaccccctctatctc 26932857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17012120 - 17012029
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgt-ttcagccctctctatctcaaagtttactctgatacaaagcctatatttatag 93  Q
    |||||||||||||||| ||||||  ||| |||||||||| | ||||| || ||||||||||| |||||||| ||||||| | ||||||||||||    
T  17012120 atacaaaccctagttt-gttgtttactt-ctaaacccttttattcagacccctctatctcaaggtttactccgatacaaggtctatatttatag 17012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 15719705 - 15719665
Alignment:
Q  27 tttctaaacccttgtttcagccctctctatctcaaagttta 67  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  15719705 tttctaaacccttgtttcagccccctctatctcaaggttta 15719665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 12186330 - 12186404
Alignment:
Q  27 tttctaaacccttg-tttcagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||| |||||||||  |||||||||| |||||| | |||||||| |  |||||||||||||||||    
T  12186330 tttctaaacccttgttttcagccccttctatctcaaggtttacatgtgatacaaggtttatatttatagtaaaag 12186404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 12937437 - 12937540
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccc-tctctatctcaaagtttac-tctgatacaaagcctata--tttatagtaaaaga 100  Q
    ||||||||||||| ||||| | ||||||||||||  ||||||||| ||| |||||||| |||||| |||||||||| | |||||  |||||||||||||     
T  12937437 aaaccctagtttt-ttgtt-tgtttctaaaccctgttttcagcccctctgtatctcaaggtttacatctgatacaatgtctatatatttatagtaaaagt 12937534  T
Q  101 atccct 106  Q
    ||||||    
T  12937535 atccct 12937540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 25466433 - 25466510
Alignment:
Q  27 tttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    ||||||||||||||||| ||||| |||||| ||||| ||||||||||| | ||   |||||||||||||||||| ||||    
T  25466433 tttctaaacccttgttttcagcc-tctctacctcaaggtttactctgacaaaagatctatatttatagtaaaagtatcc 25466510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 26066314 - 26066363
Alignment:
Q  50 tctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||| |||||||||||| || |||||||| | ||||||||||||||||||    
T  26066314 tctcaatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 26066363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 26068585 - 26068634
Alignment:
Q  50 tctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||| |||||||||||| || |||||||| | ||||||||||||||||||    
T  26068585 tctcaatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 26068634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 16455661 - 16455782
Alignment:
Q  2 tacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||||||||||||  ||||| ||| |||||||||||||| ||| | ||||||  |||||| |||||| | ||||||| |  |||||||||||||||     
T  16455661 tacaaaccctagtttttgtgttgactt-ctaaacccttgttttcagac-tctctacctctcaaggtttacaccgatacaaggtatatatttatagtaaag 16455758  T
Q  99 gaatccctcatagattggaacaaa 122  Q
    | |||||| | | |||||||||||    
T  16455759 gtatccctgaaaaattggaacaaa 16455782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 28038012 - 28038064
Alignment:
Q  71 tgatacaaagcctatatttatagtaaaagaatccctcat-agattggaacaaa 122  Q
    |||||||| | |||||||||||||||||| ||||||||| | |||||||||||    
T  28038012 tgatacaatgtctatatttatagtaaaagtatccctcataaaattggaacaaa 28038064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 3e-82; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 5622975 - 5623224
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  5622975 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttattctgatacaaaacctatatttatagtaaaaga 5623074  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccgaat 198  Q
    ||| |||||| ||||||||||||| ||||||||||||| ||| ||||||  |||  ||||||||||||||||||||||||||||| | |||||||||| |    
T  5623075 atcactcataaattggaacaaaattaggcccaaaaatatgttttattttgctgactctgcgcaaaatcgtactccgattttgccagatcgtgctccgatt 5623174  T
Q  199 tt-tatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattt 247  Q
    || || ||||| |||||||||||||||||||| |||||||||| ||||||    
T  5623175 ttgtacgaatgaaagtgccaattctgctccaataaatcgtgctccgattt 5623224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 35872632 - 35872910
Alignment:
Q  18 gttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcatagattgga 117  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||| |||||||||| ||||||    
T  35872632 gttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagcatccctcataaattgga 35872731  T
Q  118 acaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga-attttatgaatgtaag 212  Q
    || |||||| ||||  ||||||| ||| |||||||||    |||||| ||||||| ||||||||||||||     ||||||||  ||||| ||||| |||    
T  35872732 accaaatcatgcccataaaaatatgttttatttttattcttctgcgcgaaatcgtgctccgattttgcca-----tgctccgattttttacgaatgaaag 35872826  T
Q  213 tgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    || |||||||||||| |||||||||||| | ||||||||||||| ||||||||||||||| | |||||||||||| ||||||||    
T  35872827 tgtcaattctgctccgaaaaatcgtgctccaattttgacagcttcagcaaacttcaatttattcaattttgagtccctttcaca 35872910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 36865636 - 36865334
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| || |||||| |||||||||| | |||||||||||||||||     
T  36865636 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatcttaaggtttacatctgatacaatgtctatatttatagtaaaaa 36865537  T
Q  100 aatccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccg 195  Q
     |||  ||||| |||||||  |||||| ||||  ||||||||||| |||||||||    || ||| ||||||| |||| ||||||||| |||||||||||    
T  36865536 catctatcataaattggaaacaaatcaagcccataaaaatacgttttatttttattcttcttcgcgaaatcgtgctccaattttgccagaccgtgctccg 36865437  T
Q  196 a-attttatgaat-gtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagc-aaacttcaatttctccaattttgagtcacttt 292  Q
    |  ||||| |||| | |||||||||||||||||| ||||||||| || ||||||||||| ||| ||| |||||||||||||||||||||| |||||||||    
T  36865436 attttttacgaatggaaagtgccaattctgctcc-aaaaatcgtactccgattttgacaacttcagcaaaacttcaatttctccaattttaagtcacttt 36865338  T
Q  293 caca 296  Q
    ||||    
T  36865337 caca 36865334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 13858721 - 13858845
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  13858721 atacaaaccctagttttgttgttgcctttctaaacccttgtttcatccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 13858820  T
Q  101 atccctcatagattggaacaaaatc 125  Q
    |||||||||| ||||||||||||||    
T  13858821 atccctcataaattggaacaaaatc 13858845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 89 - 296
Target Start/End: Original strand, 40877901 - 40878089
Alignment:
Q  89 tatagtaaaagaatccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatgact--gcgcaaaatcgtactccgattttgccatac 186  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||  |||||||||||||||||||||||           
T  40877901 tatagtaaaagaatccctcataaattggaacaaaatcaggcccaaaaatacgttttatttatctgactctgcgcaaaatcgtactccgatttt------- 40877993  T
Q  187 cgtgctccgaattttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagt 286  Q
                 ||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  40877994 -------------ttacgaatgaaagtgccaattctgcttcaaaaaatcgtgctccgattttgacagcttcagcaaac-tcaatttctccaattttgagt 40878079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 14419428 - 14419552
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | ||||||||||||||||||     
T  14419428 atacaaaccctagtttttttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagt 14419527  T
Q  101 atccctcatagattggaacaaaatc 125  Q
    ||| |||||| ||||||||||||||    
T  14419528 atcactcataaattggaacaaaatc 14419552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14477374 - 14477271
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  14477374 atacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaaga 14477275  T
Q  101 atcc 104  Q
    ||||    
T  14477274 atcc 14477271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3886155 - 3886253
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  3886155 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaag 3886253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 1225263 - 1225166
Alignment:
Q  2 tacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  1225263 tacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagtaaaag 1225166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26775299 - 26775190
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||     
T  26775299 atacaaaccctagtattgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagt 26775200  T
Q  101 atccctcata 110  Q
    | ||||||||    
T  26775199 aaccctcata 26775190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33541625 - 33541728
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  33541625 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttacactgatacaatgtctatatttatagtaaaaga 33541724  T
Q  101 atcc 104  Q
    ||||    
T  33541725 atcc 33541728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 14807849 - 14807751
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  14807849 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 14807751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27827084 - 27826986
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  27827084 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 27826986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27829395 - 27829297
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  27829395 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaag 27829297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 30480740 - 30480893
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||  |||||||||||||| |||||||||||||||||||| |||  |||||||||| |||||| || |||||| | ||||||||||||||||||     
T  30480740 atacaaactttagttttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactaatacaatgtctatatttatagtaaaagc 30480839  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat 152  Q
    |||||||||| |||||||| |||||| ||||  ||||||||||| |||||||||    
T  30480840 atccctcataaattggaaccaaatcaagcccataaaaatacgttttatttttat 30480893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27107134 - 27107237
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||  ||||||||| | |||||||||||||||||||    
T  27107134 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttatactgatacaatgtctatatttatagtaaaaga 27107233  T
Q  101 atcc 104  Q
    ||||    
T  27107234 atcc 27107237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15072808 - 15072710
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  15072808 atacaaaccatagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 15072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4424116 - 4424018
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||||| | || |||||||||||||||    
T  4424116 atacaaaccctagttttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctgtatttatagtaaaag 4424018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18810806 - 18810708
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| |||||||||||   ||||||||||||||||||    
T  18810806 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaagatctatatttatagtaaaag 18810708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 25952614 - 25952516
Alignment:
Q  6 aaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    ||||||| |||| |||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  25952614 aaccctaattttattgttgcctttctaaacccttgtttcagccccctctatctcaaggtttcctctgatacaaagcttatatttatagtaaaagaatcc 25952516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28251804 - 28251902
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  28251804 atacaaaccctagttttgttgttgccattctaaacccttgtttcaacccactctatctcaaagtttactatgatacaaggtctatatttatagtaaaag 28251902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 181632 - 181537
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||| |||||| | |||||| ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  181632 caaaccctagttttattgttgccattctaagcccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaag 181537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 15185951 - 15186089
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    ||||| |||||||||| || |||||||||||||||||||||| |  || |||||||| ||||||||||||||||||  ||||||||||||||||| ||||    
T  15185951 aaaccatagttttgttattttctttctaaacccttgtttcagtcacctttatctcaaggtttactctgatacaaagtttatatttatagtaaaagtatcc 15186050  T
Q  105 ctcat-agattggaacaaaatcaggcccaaaaatacgtt 142  Q
    ||||| | |||||||||||   |||||| ||||||||||    
T  15186051 ctcataaaattggaacaaatctaggcccgaaaatacgtt 15186089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41382771 - 41382673
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||| ||||||||||||| |||||||||||||||| |||||  |||||||||| |||||||||||| ||| | ||||||||||||||||||    
T  41382771 atacaaaccctaattttgttgttgtcattctaaacccttgttttagccccatctatctcaaggtttactctgattcaaggtctatatttatagtaaaag 41382673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44720941 - 44720843
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| || ||||| || | ||||||||||||||||||    
T  44720941 atacaaaacatagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctttgatataaggtctatatttatagtaaaag 44720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12517261 - 12517361
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||| ||||||||||| |  ||||| ||||||||||    
T  12517261 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtatatatatatagtaaaa 12517360  T
Q  99 g 99  Q
    |    
T  12517361 g 12517361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 21482394 - 21482317
Alignment:
Q  27 tttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21482394 tttctaaacccttgtttcagtccactctatctcaaagtttactctgatacaaattctatatttatagtaaaagaatcc 21482317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32339407 - 32339305
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||||  ||||||||| | |||||||||||||||    
T  32339407 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaa 32339308  T
Q  97 aag 99  Q
    |||    
T  32339307 aag 32339305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 18812989 - 18812893
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||  ||||||||| |||||| |||||||||||   ||||||||||||||||||    
T  18812989 acaaactctagttttgttgttgcctttctaaacccttgtttcagcctcctctatctccaagtttgctctgatacaagatctatatttatagtaaaag 18812893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 5372419 - 5372517
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||  ||||| ||||||||| | ||||| |||||||||||||||||    
T  5372419 aaaccctaattttgttgttgcctttctaaacccttgtttcagccc-ctctatctcaagatttacactgatacaatgtctataattatagtaaaagaatcc 5372517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15068079 - 15067981
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||   |||||||| |  |||||||||||||||||    
T  15068079 atacaaaccctggttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttaggttgatacaaggtttatatttatagtaaaag 15067981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41384842 - 41384745
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||  |||||| |||| ||| | ||||||||||||||||||    
T  41384842 atacaaaccctaattttgttgttgtcattctaaacccttgtttcagccc-ctctatctcaatttttactttgattcaaggtctatatttatagtaaaag 41384745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3874108 - 3874006
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcc----ctctctatctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||    || ||| ||||||||||||  ||||||||||| |||||||||||||||    
T  3874108 atacaaactttagttttgttgttgtctttctaaacccttgtttcagcccccgctatctctctcaaagtttagcctgatacaaagtctatatttatagtaa 3874009  T
Q  97 aag 99  Q
    |||    
T  3874008 aag 3874006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15809317 - 15809215
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc----tctctatctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    | ||| ||||||||||||  ||||||||| | |||||||||||||||    
T  15809317 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctctctcaaagtttagcctgatacaaggtctatatttatagtaa 15809218  T
Q  97 aag 99  Q
    |||    
T  15809217 aag 15809215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24873418 - 24873522
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||      ||||| ||||||||||||  ||||||||| | |||||||||||||    
T  24873418 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagt 24873517  T
Q  95 aaaag 99  Q
    |||||    
T  24873518 aaaag 24873522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27911112 - 27911015
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||  |||||||| | | |||||||| |||||||    
T  27911112 atacaaaccctagttttgttgttgcctt-ctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaag 27911015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27957531 - 27957434
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||  |||||||| | | |||||||| |||||||    
T  27957531 atacaaaccctagttttgttgttgcctt-ctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaag 27957434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22684893 - 22685001
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcc----------ctctctatctcaaagtttactctgatacaaagcctatattta 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||| ||||||||||| | |||||||||    
T  22684893 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcctcctctatctctctctctctcaaagtttgctctgatacaaggtctatattta 22684992  T
Q  91 tagtaaaag 99  Q
    |||| ||||    
T  22684993 tagtgaaag 22685001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28283456 - 28283560
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||      ||||| ||||||||||||  ||||||||| | |||||||||||||    
T  28283456 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagt 28283555  T
Q  95 aaaag 99  Q
    |||||    
T  28283556 aaaag 28283560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 30481028 - 30481093
Alignment:
Q  231 aaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  30481028 aaatcgtgctccgattttgacaacttcagcaaacttcaatttctccaattttgagtcactttcaca 30481093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 2468361 - 2468433
Alignment:
Q  27 tttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| |||||||||||| | ||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  2468361 tttctaaatccttgtttcagctccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaag 2468433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 37214458 - 37214514
Alignment:
Q  12 agttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttac 68  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||    
T  37214458 agttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttac 37214514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 43530209 - 43530124
Alignment:
Q  18 gttgttgtctttctaaacccttgtttcagccctctctatctc----aaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||  ||||||||||||||||||||||| |||||||||    ||||||| ||||||||||| | ||||||||||||||||||    
T  43530209 gttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaag 43530124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 608832 - 608774
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||| |||||||||    
T  608832 atacaaaccctaattttgttgttgcatttctaaacccttgtttcagccccctctatctc 608774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43082071 - 43082013
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  43082071 atacaaaccttagttttgttgttgcttttctaaacccttgtttcagccccctctatctc 43082013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 31162286 - 31162189
Alignment:
Q  27 tttctaaacccttgtttc-agccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcat-agattggaacaaa 122  Q
    |||||||||| ||||||  ||||| |||| |||||| ||||||| |||||||| | |||||||||||||||||| ||||||||| | |||||||||||    
T  31162286 tttctaaacctttgtttttagccccctctttctcaaggtttactatgatacaaggtctatatttatagtaaaagtatccctcataaaattggaacaaa 31162189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43079700 - 43079652
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc 49  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  43079700 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccc 43079652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 5623240 - 5623282
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttga 284  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  5623240 cgattttgacagcttcagcaaactttaatttctccaattttga 5623282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 6376032 - 6375978
Alignment:
Q  56 tctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcata 110  Q
    |||||| |||||||||||||||| | |||||||||||||||||| ||||| ||||    
T  6376032 tctcaatgtttactctgatacaaggtctatatttatagtaaaagtatcccgcata 6375978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31035167 - 31035068
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctcta--tctcaaagtttac-tctgatacaaagcctatatttatagtaa 96  Q
    ||||||||||||||||| |||||| ||| ||||||| |||||| ||| | ||||||  ||||||||||||| |||||||||| | |||||||||||||||    
T  31035167 atacaaaccctagttttcttgttgactt-ctaaaccattgttttcagac-tctctacctctcaaagtttacatctgatacaaggtctatatttatagtaa 31035070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 21480586 - 21480542
Alignment:
Q  27 tttctaaacccttgtttcagccctctctatctcaaagtttactct 71  Q
    |||||||||||||||||||||||  |||||||||| |||||||||    
T  21480586 tttctaaacccttgtttcagccccatctatctcaaggtttactct 21480542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 21482160 - 21482121
Alignment:
Q  262 aacttcaatttctccaattttgagtcactttcacagtaat 301  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  21482160 aacttcaatttcttcaattttgagtcactttcacaataat 21482121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 13858966 - 13859020
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||||| || | ||||||| ||||||||||||||| ||||| |||||||    
T  13858966 cgattttgacagattcaacaaactttaatttctccaatttttagtcattttcaca 13859020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 14419782 - 14419832
Alignment:
Q  49 ctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||| |||||| ||||||||| | |||||||||||| |||||    
T  14419782 ctctctatctcaaggtttaccctgatacaatgtctatatttatagcaaaag 14419832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 17799752 - 17799810
Alignment:
Q  83 tatatttatagta-aaagaatccctcatagattggaacaaaatcaggcccaaaaatacg 140  Q
    ||||||||||||  |||| |||||||||| |  ||||||||||||||||||||||||||    
T  17799752 tatatttatagtggaaagcatccctcataaaaaggaacaaaatcaggcccaaaaatacg 17799810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 30422884 - 30422850
Alignment:
Q  258 agcaaacttcaatttctccaattttgagtcacttt 292  Q
    ||||||||||||||||| |||||||||||||||||    
T  30422884 agcaaacttcaatttcttcaattttgagtcacttt 30422850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 17847558 - 17847505
Alignment:
Q  69 tctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaa 122  Q
    |||||||||| | |||||||||||||||||| |||||||| |  ||||||||||    
T  17847558 tctgatacaaggtctatatttatagtaaaagtatccctcaaaatttggaacaaa 17847505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 2268832 - 2268868
Alignment:
Q  258 agcaaacttcaatttctccaattttgagtcactttca 294  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  2268832 agcaaactttaatttcttcaattttgagtcactttca 2268868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 14419695 - 14419731
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaa 278  Q
    |||||||||||| || |||||||||||||||||||||    
T  14419695 cgattttgacagattcagcaaacttcaatttctccaa 14419731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 33032508 - 33032440
Alignment:
Q  83 tatatttatagta-aaagaatccctcatagattggaacaaaatcaggcccaaaaatacgttctattttt 150  Q
    ||||||||||||  |||| |||||||||| |  ||||||||||||| |||||||||||| ||| |||||    
T  33032508 tatatttatagtggaaagcatccctcataaaaaggaacaaaatcagacccaaaaatacgatctgttttt 33032440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 28196655 - 28196406
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  28196655 atacaaaccctagttttgttgttgcctttctaaacctttgtttcagccccctctatctcaatgtttactctgatacaaagcatatatttatagtaaaaga 28196556  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccga-a 197  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| | | ||||||||      
T  28196555 atccctcataaattggaacaaaatcaggcccaaaaatacgttttatttttatgactctgcgcaaaatcgtactccgattttgccagatcatgctccgatt 28196456  T
Q  198 ttttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattt 247  Q
    |||||  |||| ||||| ||||||| || ||||||| | |||||||||||    
T  28196455 ttttactaatgaaagtgtcaattcttctgcaaaaaaccatgcttcgattt 28196406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 4 - 296
Target Start/End: Original strand, 38414281 - 38414564
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    ||||||||||||||||||||| ||||||||      |||||||||| ||||||||||| |||||||     |||||||||||||||||||||||||||||    
T  38414281 caaaccctagttttgttgttgcctttctaa------gtttcagccccctctatctcaaggtttact-----acaaagcctatatttatagtaaaagaatc 38414369  T
Q  104 cctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccga-attt 200  Q
    | ||||| |||| |||||||| ||||||||||||| | | |||||||||||  |||||| |||||||||||||||||||||| | | ||||||||  |||    
T  38414370 cttcataaattgaaacaaaataaggcccaaaaatatgatttatttttatgattctgcgc-aaatcgtactccgattttgccagatcatgctccgattttt 38414468  T
Q  201 tatgaat-gtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    || |||| | |||||||||||||| ||| ||||||||| || | ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38414469 tacgaatggaaagtgccaattctggtcc-aaaaatcgtactccaattttgacagcttcagcaaacttcaatttctccaattttgagtcactttcaca 38414564  T

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Target: chr2; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 17848461 - 17848283
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| | |||||  |||||||||||||||||||||||||||||    
T  17848461 atacaaaccctagttttgttgttgtctttctaaaccctcgtttgagccccctctatctcaaggattact--gatacaaagcctatatttatagtaaaaga 17848364  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgatttt 179  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||| ||||||||||    
T  17848363 atccctcataaattggaacaaaatcaggcccaaaaatacgttttatttttctgactctgcgcaaaatcgtgctccgatttt 17848283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 17849135 - 17848814
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| |  |||||||||||||||||     
T  17849135 atacgaactctagttttgttgttatctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaagc 17849036  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||||||||| |||||||| |||||||||||  | ||||||||| |||||||||    |||||| ||||||| |||||||||| ||| ||||||||| ||    
T  17849035 atccctcataaattggaaccaaatcaggcccatataaatacgttttatttttattcttctgcgcgaaatcgtgctccgatttttccagaccgtgctcaga 17848936  T
Q  197 -attttatgaatgtaagtgccaattctgctccaaaaaatcgt---------------------gcttcgattttgacagcttaagcaaacttcaatttct 274  Q
      ||||| ||||| ||||| ||||||| ||||||||||||||                     |||||||||||||||| || |||||||||||||||||    
T  17848935 ttttttacgaatgaaagtgtcaattcttctccaaaaaatcgtgttccgatttttccaaatcgggcttcgattttgacagtttcagcaaacttcaatttct 17848836  T
Q  275 ccaattttgagtcactttcaca 296  Q
    ||||||||||||||||||||||    
T  17848835 ccaattttgagtcactttcaca 17848814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31733002 - 31733154
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||| ||||||| ||||||||||||||||||     
T  31733002 atacaaactctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgttacaaagtctatatttatagtaaaagc 31733101  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctattttta 151  Q
    |||||||||| |||||||| |||||||||||  ||||||||||| ||||||||    
T  31733102 atccctcataaattggaaccaaatcaggcccataaaaatacgttttattttta 31733154  T

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Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 45239213 - 45239497
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc----aaagtttac-tctgatacaaagcctatatttatagta 95  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||||| |||||||||    || |||||| ||||||  |  | ||||||||||||||    
T  45239213 atacaaaccctagttttgtttttgtctttctaaatcattgtttcagccccctctatctctctcaaggtttacatctgatgaatggtctatatttatagta 45239312  T
Q  96 aaagaatccctcatagattggaacaaaatcaggccca--aaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgc 191  Q
    |||| |||||||||| |||||||| ||||||||||||  |||||||||| |||||||||    |||||  ||||||| ||||||||||                
T  45239313 aaagcatccctcataaattggaactaaatcaggcccataaaaatacgttttatttttattcttctgcgtgaaatcgtgctccgatttt------------ 45239400  T
Q  192 tccgaattttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactt 291  Q
            ||| ||||| |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45239401 --------ttacgaatgaaagtgccaattctgctccgaaaaatcgtgctccgattttgacagcttcagcaaacttcaatttctccaattttgagtcactt 45239492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19007658 - 19007549
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  19007658 atacaaaccataattttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactatgatacaaagcctatatttatagtaaaaga 19007559  T
Q  101 atccctcata 110  Q
    ||||||||||    
T  19007558 atccctcata 19007549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40032295 - 40032393
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40032295 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 40032393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24162449 - 24162547
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  24162449 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 24162547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 11578342 - 11578522
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag- 99  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||| |||||||||||  ||||| |||||| || | ||||||||||||||||||     
T  11578342 atacaaaccctagtttttttgttgactt-ctaaacccttgtttcagcccactctatctcaagatttaccctgatataaggtctatatttatagtaaaagc 11578440  T
Q  100 aatccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttatg-actgcgcaaaatcgtactccgatttt 179  Q
    ||||||||| | |||||||| |||||||||||  ||||||||||| |||||||||| |  ||| ||||||||||| |||||||    
T  11578441 aatccctcaaaaattggaac-aaatcaggcccctaaaaatacgttttatttttatgcatagcgtaaaatcgtactacgatttt 11578522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22163184 - 22163287
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  22163184 atacaaaccctagtgttgttgttgcctttctaaatccttgtttcagccccctctatctcaaagtttacactgatacaatgtctatatttatagtaaaaga 22163283  T
Q  101 atcc 104  Q
    ||||    
T  22163284 atcc 22163287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 13910281 - 13910379
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  13910281 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 13910379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19504582 - 19504680
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  19504582 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 19504680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27104817 - 27104719
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  27104817 atacaaaccctagttttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagttttctctgatacaaggtctatatttatagtaaaag 27104719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11739797 - 11739900
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||| || |||||| | |||||||||||||||||||    
T  11739797 atacaaaccctaattttgttgttgtctttctaaacccttgttccagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaaga 11739896  T
Q  101 atcc 104  Q
    ||||    
T  11739897 atcc 11739900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22287573 - 22287671
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| | |||||| | ||||||||||||||||||    
T  22287573 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttatagtaaaag 22287671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22407646 - 22407744
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | || ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  22407646 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagcaccctatatctcacagtttactctgatacaaggtctatatttatagtaaaag 22407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42064533 - 42064435
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  42064533 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagctccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 42064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3022181 - 3022078
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||  || |||||||| |||||||||||||||||| ||||||||||||||| |||    
T  3022181 atacaaactctagttttgttgttgcctttataaacccttgtttcagcctcctatatctcaaggtttactctgatacaaagtctatatttatagtaagaga 3022082  T
Q  101 atcc 104  Q
    ||||    
T  3022081 atcc 3022078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 14837290 - 14837188
Alignment:
Q  2 tacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaa 101  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| | ||||||||||| |||||| ||||||||| | ||||||||| ||||||||||    
T  14837290 tacaaaccctagttttgttgttgtcttttttaacccttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaagaa 14837191  T
Q  102 tcc 104  Q
    |||    
T  14837190 tcc 14837188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42452801 - 42452703
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||| ||||||    
T  42452801 atacaaactctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttataataaaag 42452703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15539712 - 15539815
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||| || |||||||| |||||| ||||||||| | ||||||||||||||||| |    
T  15539712 atacaaaccctaattttgttgttgtcattctaaacccttgtttcaaccccctatatctcaaggtttacactgatacaatgtctatatttatagtaaaaca 15539811  T
Q  101 atcc 104  Q
    ||||    
T  15539812 atcc 15539815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 19502250 - 19502345
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| || |||||| |||||| ||||||||||| | |||||||||||||||||    
T  19502250 acaaaccctagttttgttgttgcctttctaaactcttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaa 19502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45280221 - 45280320
Alignment:
Q  1 atacaaaccctagttttgttgttg-tctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |  |||||||||||| ||||    
T  45280221 atacaaaccctagttttgttgttgctttttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtatatatttatagtgaaag 45280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43623805 - 43623903
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||  ||||||||||||||||| | |||| |||||||||||||    
T  43623805 atacaaaccctagttttgttgttgcctttctaaaccattgtttcacccccctctatctcccagtttactctgatacaaggtctatttttatagtaaaag 43623903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 37963190 - 37963286
Alignment:
Q  27 tttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcat-agattggaacaaa 122  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||| |||| |||| | |||||||||||    
T  37963190 tttctaaacccttgtttcagccccctctatctcaaggtttactcttatacaaagtctatatttatagtaaaagtatccatcataaaattggaacaaa 37963286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 6264396 - 6264479
Alignment:
Q  15 tttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||    
T  6264396 tttgttgttgcctttctaaacctttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaa 6264479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 22874134 - 22874019
Alignment:
Q  27 tttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaaatca 126  Q
    ||||||||||||||||||||||| ||||||||| | |||| |||||||||||||||| ||||||||| ||||| | |||||||| | | |||  |||||     
T  22874134 tttctaaacccttgtttcagccccctctatctccaggtttgctctgatacaaagcctgtatttatagcaaaagtaaccctcataaaattgaaacaaatct 22874035  T
Q  127 ggcccaaaaatacgtt 142  Q
    ||||||||||||||||    
T  22874034 ggcccaaaaatacgtt 22874019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6259052 - 6259150
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||| ||  ||||||||||||||||| ||| |||||| | ||||||||||||||||||    
T  6259052 atacaaaccctagttttattgttgcctttctaaactcttgtttcatcctcctctatctcaaagtttagtctaatacaaggtctatatttatagtaaaag 6259150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21520930 - 21521030
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc--tctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||  ||| | |||||||||||| |||||||||| |  ||||||||||||||||    
T  21520930 atacaagccctagttttgttgttgcctttctaaacccttgtttcagccccatctatctctcaaagtttagtctgatacaaggtttatatttatagtaaaa 21521029  T
Q  99 g 99  Q
    |    
T  21521030 g 21521030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23452474 - 23452576
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcc----ctctctatctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    || ||| ||||||||||||  ||||||||| | |||||||||||||||    
T  23452474 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctgtctctctcaaagtttagcctgatacaaggtctatatttatagtaa 23452573  T
Q  97 aag 99  Q
    |||    
T  23452574 aag 23452576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 38020157 - 38020058
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    |||||||||||||||||||| ||||||||||||||||| || ||| ||||||||| | |||||| | ||||||| | ||||||||||||||||| |||||    
T  38020157 aaaccctagttttgttgttgcctttctaaacccttgttccaaccccctctatctccaggtttacaccgatacaatgtctatatttatagtaaaaaaatcc 38020058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 44289305 - 44289408
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||| ||||||||||||||| ||| ||||||| |||||| || || |||||| |||| |||| || ||||||||| ||||||||||||||||||||    
T  44289305 atacaaactctagttttgttgttgccttcctaaacctttgttttagtcccctctatatcaaggtttgctatgatacaaaacctatatttatagtaaaaga 44289404  T
Q  101 atcc 104  Q
    ||||    
T  44289405 atcc 44289408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 34979816 - 34979919
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||| |||||  |||||||||| ||||||||||||| ||||||||||| |||||| || |||||| | |||||||||| |  |||||    
T  34979816 atacaaaccctagtttttttgttacctttctaaacgcttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatggccaaaga 34979915  T
Q  101 atcc 104  Q
    ||||    
T  34979916 atcc 34979919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 296
Target Start/End: Original strand, 31733196 - 31733281
Alignment:
Q  210 aagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||| |||||||||| |||||| |||| || | ||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  31733196 aagtgtcaattctgcttcaaaaa-tcgtactccaattttgacagcttcaccaaacttcaatttctccaattttgagtcactttcaca 31733281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5377666 - 5377768
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| || |||||    ||||||||||| |||||| |||| | ||||||||||||| |    
T  5377666 atacaaaccttagttttgttgttgcctttctaaacccttgtttcagtcccctctatctctctcaaagtttgctctgaaacaaggtctatatttatagtga 5377765  T
Q  97 aag 99  Q
    |||    
T  5377766 aag 5377768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42923746 - 42923846
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagc--cctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||||  ||||| | |||||| ||||||| |||| ||| | |||||||||||||||||    
T  42923746 atacaaatcctagttttgttgttgccattctaaacccttgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttatagtaaaa 42923845  T
Q  99 g 99  Q
    |    
T  42923846 g 42923846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 38020218 - 38020162
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  38020218 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 38020162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 28196391 - 28196337
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  28196391 cgattttgacagcttcagcaaacttcaatttctccatttttgagtcactttcaca 28196337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35215823 - 35215881
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  35215823 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctc 35215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 12342673 - 12342750
Alignment:
Q  28 ttctaaaccctt-gtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    |||||||||||| |||||||||| ||||||||||| |||||||||||||||| |  ||||||||||||||||| ||||    
T  12342673 ttctaaaccctttgtttcagccccctctatctcaaggtttactctgatacaatgtgtatatttatagtaaaagtatcc 12342750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 18800565 - 18800637
Alignment:
Q  27 tttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||| || |||||| | |||||| ||||||||| | ||||||||||||||||||    
T  18800565 tttctaaacccttgtttcagccccctatatctccatgtttaccctgatacaaggtctatatttatagtaaaag 18800637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 17848222 - 17848161
Alignment:
Q  231 aaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttc 293  Q
    |||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  17848222 aaatcgggctccgattttgacagcttcagcaaact-caatttctccaattttgagtcactttc 17848161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 35218204 - 35218258
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  35218204 aaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctc 35218258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 17897479 - 17897586
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtt-tcagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||||||||||||| |||||| ||| ||||||||||||| |||| | |||||| |||||  ||||| |||||||||| | |||||||||||||||||    
T  17897479 atacaaaccctagttttattgttgactt-ctaaacccttgttctcagac-tctctacctcaagttttacatctgatacaaggtctatatttatagtaaaa 17897576  T
Q  99 gaatccctca 108  Q
    | ||||||||    
T  17897577 gtatccctca 17897586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35107317 - 35107213
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttg-tttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||| |||||| ||| |||||| |||| ||| || | |||||| ||||| ||||||| |||||||| | ||||||||||||||||||    
T  35107317 atacaaaccctagttttcttgttgactt-ctaaactcttggttttagac-tctctacctcaaggtttactatgatacaatgtctatatttatagtaaaag 35107220  T
Q  100 aatccct 106  Q
     ||||||    
T  35107219 tatccct 35107213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 40699280 - 40699221
Alignment:
Q  49 ctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctca 108  Q
    |||||| |||||| |||||||||||| ||| | |||||||||||||||||| ||||||||    
T  40699280 ctctctctctcaaggtttactctgatgcaaggtctatatttatagtaaaagtatccctca 40699221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 20589631 - 20589557
Alignment:
Q  49 ctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag-aatccctcatagattggaacaaa 122  Q
    |||||| |||||| ||||  |||||||||| | |||||||||||||||||| ||||||||| | |||||||||||    
T  20589631 ctctctctctcaaggtttcatctgatacaaggtctatatttatagtaaaagcaatccctcaaaaattggaacaaa 20589557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 13828603 - 13828698
Alignment:
Q  27 tttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaa 122  Q
    |||||||| |||||||| |||||| |||| |||||| ||||  ||| ||||||   ||||||||||||||||||||||||| | | |||||||||||    
T  13828603 tttctaaatccttgttttcagccc-ctctctctcaaggtttcatctcatacaacttctatatttatagtaaaagaatccctaaaaaattggaacaaa 13828698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 20146987 - 20147107
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc--aaagtttactctgatacaaagcctatatttatagtaaaagaa 101  Q
    |||||||||||||| |||||| ||| || |||||||||||     |||||||||||  || ||||||| |||||||| | |||||||||||||||||  |    
T  20146987 caaaccctagttttcttgttgactt-cttaacccttgttttcaaactctctatctctcaaggtttactttgatacaaggtctatatttatagtaaaaata 20147085  T
Q  102 tccctcat-agattggaacaaa 122  Q
    | |||||| | |||||||||||    
T  20147086 ttcctcataaaattggaacaaa 20147107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 35028550 - 35028476
Alignment:
Q  49 ctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaa 122  Q
    |||||||  |||| |||||| |||||||||| | |||||||||||||||||| |||||| | | |||||||||||    
T  35028550 ctctctaattcaaggtttacatctgatacaatgtctatatttatagtaaaagtatccctaaaaaattggaacaaa 35028476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 41304627 - 41304667
Alignment:
Q  2 tacaaaccctagttttgttgttgtctttctaaacccttgttt 43  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  41304627 tacaaaccctagttttgttgttggc-ttctaaacccttgttt 41304667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 45156988 - 45156928
Alignment:
Q  82 ctatatttatagtaaaagaatccctcatagattggaacaaaatcaggcccaaaaatacgtt 142  Q
    |||||||||||||||||| |||||||| |  ||||||||||  || ||| |||||||||||    
T  45156988 ctatatttatagtaaaagcatccctcaaaatttggaacaaatccacgcctaaaaatacgtt 45156928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 20137346 - 20137665
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  20137346 atacaaactctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagccaatatttatagtaaaaga 20137445  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccga-a 197  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||| | |||||| |||      
T  20137446 atccctcataaattggaacaaaatcaggcccaaaaatacgttttatttttatgattttgcgcaaaatcgtactccgattttgccagatcgtgcttcgatt 20137545  T
Q  198 ttttatgaat-gtaagtgccaattctgctccaaa--------------------aaatcgtgcttcgattttgacagcttaagcaaacttcaatttctcc 276  Q
    ||||| |||| | |||||||||||||||||| ||                    |||||||||| ||||| | ||||||| |||||||||||||||||||    
T  20137546 ttttacgaatggaaagtgccaattctgctccgaaaatcgtactccgattttttcaaatcgtgctccgattataacagcttcagcaaacttcaatttctcc 20137645  T
Q  277 aattttgagtcactttcaca 296  Q
    ||||||||||||||||||||    
T  20137646 aattttgagtcactttcaca 20137665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 42223209 - 42222891
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctc-tctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||| | |||||||||| |||||||||||||||||||||||||||||||||||||    
T  42223209 atacaaaccctagttttgttgttgccattctaaacccttgtttcatcccacatctatctcaaggtttactctgatacaaagcctatatttatagtaaaag 42223110  T
Q  100 aatccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccgaa 197  Q
    || |||||||| ||||||||||||||||||||||||||||||| ||||||| |||  || |||||||||||||||||||||||||||| ||| ||||||     
T  42223109 aaaccctcataaattggaacaaaatcaggcccaaaaatacgttttatttttctgaatctacgcaaaatcgtactccgattttgccatatcgtactccgat 42223010  T
Q  198 tt----------------------ttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctc 275  Q
    ||                      ||| ||||| ||||| |||||||||||| |||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  42223009 tttgccagatcgtgctctgattttttacgaatgaaagtgtcaattctgctcc-aaaaatcgtgctccgattttgacagcttcagcaaac-tcaatttctc 42222912  T
Q  276 caattttgagtcactttcaca 296  Q
    ||||||| |||||||||||||    
T  42222911 caattttaagtcactttcaca 42222891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 11355310 - 11355130
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  11355310 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaagcctatatttatagtaaaaga 11355211  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgatttt 179  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||| ||||||||||    
T  11355210 atccctcataaattggaacaaaatcaggcccaaaaatacgttttatttttctgactctgcgcaaaatcgtgctccgatttt 11355130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 4296172 - 4296452
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaa-gcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||| | ||||||||||||||||||    
T  4296172 atacaaaccctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaatgtctatatttatagtaaaag 4296271  T
Q  100 aatccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccg 195  Q
     |||||||||| |||||| | |||||||||||  ||||||||||| |||||||||    |||||||||||||| ||||||||                      
T  4296272 catccctcataaattggatccaaatcaggcccataaaaatacgttttatttttattcttctgcgcaaaatcgtgctccgatt------------------ 4296353  T
Q  196 aattttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcac 295  Q
      ||||  ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  4296354 --tttttcgaatgaaagtggcaattctgctccaaaaaatcgtgctccgattttgacagcttcagcaagcttcaatttctccaattttgagtcactttcac 4296451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 9680871 - 9680638
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc----aaagtttac-tctgatacaaagcctatatttatagta 95  Q
    ||||||||| |||||||||||||| | |||||||||||||||||| ||| |||||||||    || |||||| |||||||||| | ||||||||||||||    
T  9680871 atacaaaccatagttttgttgttgcccttctaaacccttgtttcaaccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagta 9680772  T
Q  96 aaagaatccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgc 191  Q
    |||| |||||||||| |||||||| |||||||||||  |||||||| || ||||||| |||  |||||||||||||||||||||||||| || | |||||    
T  9680771 aaagcatccctcataaattggaaccaaatcaggcccataaaaatacattttatttttctgaatctgcgcaaaatcgtactccgattttgtcagatcgtgc 9680672  T
Q  192 tccgaattttat-gaatgtaagtgccaattctgc 224  Q
    ||| | |||| | ||||| ||||||| |||||||    
T  9680671 tccaatttttttcgaatgaaagtgcccattctgc 9680638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 22828870 - 22829012
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||     
T  22828870 atacaaaccttagttttgttgttgcctttctaaactcttgtttcagccccctctatctcaaggtttactcggatacaaagcctatatttatagtaaaagt 22828969  T
Q  101 atccctcat-agattggaacaaaatcaggcccaaaaatacgtt 142  Q
    ||||||||| | | |||||||||   |||||| ||||||||||    
T  22828970 atccctcataaaactggaacaaatctaggcccgaaaatacgtt 22829012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 27306470 - 27306564
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  27306470 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 27306564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42331236 - 42331334
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  42331236 atacaaaccttagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaag 42331334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 35679 - 35583
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  35679 acaaaccctagttttgttgttgtctttctgaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 35583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 44614 - 44518
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  44614 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 44518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7188594 - 7188453
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  7188594 atacaaaccctatttttattgttgactt-ctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 7188496  T
Q  101 atccctcat-agattggaacaaa-atcaggcccaaaaatacgtt 142  Q
    ||||||||| | |||||||||||  ||| |||||||||||||||    
T  7188495 atccctcataaaattggaacaaatctca-gcccaaaaatacgtt 7188453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21680079 - 21679976
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| || |||||| | |||||||||||||||||||    
T  21680079 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaaga 21679980  T
Q  101 atcc 104  Q
    ||||    
T  21679979 atcc 21679976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1049532 - 1049630
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||||| | ||||||||||||||||||    
T  1049532 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaag 1049630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18567665 - 18567567
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||   ||||||||||||||||||    
T  18567665 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaag 18567567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31435284 - 31435382
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||   ||||||||||||||||||    
T  31435284 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaag 31435382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24258515 - 24258423
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatag 93  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||    
T  24258515 atacaaaccctaattttgttgttgcctttctaaacccttgtttcagccccctctatctcaatgtttactctgatacaaaacctatatttatag 24258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25276193 - 25276090
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||   |||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  25276193 atacaaaccctagttttgttgttgcctttctaaattattgttttagccccctctatctcaaagtttgctctgatacaaagcatatatttatagtaaaaga 25276094  T
Q  101 atcc 104  Q
    ||||    
T  25276093 atcc 25276090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 39146224 - 39146327
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| |||||| ||||||||  | |||||||||||||||||||    
T  39146224 atacaaaccctagttttgttgttgtctatctaaacccttgtttcagccccctccatctcaaggtttacactgatacagtgtctatatttatagtaaaaga 39146323  T
Q  101 atcc 104  Q
    ||||    
T  39146324 atcc 39146327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 44724631 - 44724528
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || |||||| | |||||| ||||||||| | |||||||||||||||||||    
T  44724631 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctatatctccaggtttacactgatacaatgtctatatttatagtaaaaga 44724532  T
Q  101 atcc 104  Q
    ||||    
T  44724531 atcc 44724528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 24748646 - 24748544
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||||| | ||||||||||| |||||||    
T  24748646 atacaaaccctagttttattgttgtctttctaaacccttgtttcagccccctctaagtcaaagtttacactgatacaatgtctatatttataataaaaga 24748547  T
Q  101 atc 103  Q
    |||    
T  24748546 atc 24748544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21678118 - 21678015
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||  ||||||||   |||||||||||||||||||    
T  21678118 atacaaaccctagttttgatgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacattgatacaatatctatatttatagtaaaaga 21678019  T
Q  101 atcc 104  Q
    ||||    
T  21678018 atcc 21678015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 25542582 - 25542485
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  25542582 atacaaaccctagttttgttgttacctttctaaacctttgtttcagccc-ctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 25542485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31156148 - 31156246
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |  ||||||||   ||||||||||||||||||    
T  31156148 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgccttgatacaagctctatatttatagtaaaag 31156246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26804621 - 26804527
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    |||| | ||||||||||||||||||    
T  26804621 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttactc----acaaggtctatatttatagtaaaag 26804527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7470259 - 7470359
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    |||||||||||| |||||||||| | |||||||||||||||    
T  7470259 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaa 7470358  T
Q  97 a 97  Q
    |    
T  7470359 a 7470359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 443647 - 443549
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | ||||||||| |||||| ||| | ||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  443647 atacaaaccctagttttgttgttgccattctaaaccattgttttagctccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaag 443549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3878629 - 3878540
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||||||| | |||||||    
T  3878629 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtctatatt 3878540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 13099713 - 13099811
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||| ||||||| |||| ||| | ||||||||||||||||||    
T  13099713 atacaaaccctagttttgttgttgccattctaaacccttgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttatagtaaaag 13099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22251779 - 22251877
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||| ||| |  |||||||||||||||||    
T  22251779 atacaaactctagttttgttgttgcctttctaaactcttgtttcagcctcctctatctcaaagtttactctgattcaaggtttatatttatagtaaaag 22251877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40836979 - 40837077
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||| || ||| ||||||||||| | ||||||||||||||||||    
T  40836979 atacaaaccctagttttgttgttgcctttctaaacccttctttcagccccctcaatctccaaatttgctctgatacaaggtctatatttatagtaaaag 40837077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 37412365 - 37412462
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| || |||||| | |||||||||||| ||| | |||||||||||||||||    
T  37412365 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctatatctccaggtttactctgattcaaggtctatatttatagtaaaa 37412462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38394038 - 38393936
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||||  ||||||||| | |||||||||||||||    
T  38394038 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaa 38393939  T
Q  97 aag 99  Q
    |||    
T  38393938 aag 38393936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7472217 - 7472317
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||    |||||||||||| |||||||||| | |||||||||||||||    
T  7472217 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaa 7472316  T
Q  97 a 97  Q
    |    
T  7472317 a 7472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 3035769 - 3035671
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||||  ||||||||| | ||||||||||||||||||    
T  3035769 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaag 3035671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9679111 - 9678981
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttac-tctgatacaaagcctatatttatagta 95  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||| |||||    ||||||||||||| ||||||||||   ||||||||||||||    
T  9679111 atacaaaccctagttttgttgttgtcattctagatccttgtttcagccccctctatctctctcaaagtttacatctgatacaagatctatatttatagta 9679012  T
Q  96 aaagaatccctcatagattggaacaaaatca 126  Q
    |||  |||||||||| |||| ||| ||||||    
T  9679011 aaaacatccctcataaattgaaaccaaatca 9678981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21990202 - 21990106
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||| | |||||||||||||||| |||||||||||||||||||||| ||||||||| | |||||||||||| ||| | |||||||||||||||||    
T  21990202 atacaaatcatagttttgttgttgtcattctaaacccttgtttcagccc-ctctatctccaggtttactctgattcaaggtctatatttatagtaaaa 21990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 48457705 - 48457603
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||||  ||||||||| | ||||||||||||| |    
T  48457705 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtga 48457606  T
Q  97 aag 99  Q
    |||    
T  48457605 aag 48457603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 22392495 - 22392427
Alignment:
Q  31 taaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22392495 taaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 22392427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 20091779 - 20091900
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||| |||| ||  | |||||||||||| |||||| ||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  20091779 atacaaaccctagttttgt-gttgcctc-cgaaacccttgttttcagccccctctatctcaaggtttactctgataaaaagtctatatttatagtaaaag 20091876  T
Q  100 aatccctcat-agattggaacaaa 122  Q
     ||||||||| | |||||||||||    
T  20091877 tatccctcataaaattggaacaaa 20091900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 20626090 - 20625990
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    |||||||||||| ||||||| || | ||||||||||| |||    
T  20626090 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataa 20625991  T
Q  97 a 97  Q
    |    
T  20625990 a 20625990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 20629981 - 20629881
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    |||||||||||| ||||||| || | ||||||||||| |||    
T  20629981 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataa 20629882  T
Q  97 a 97  Q
    |    
T  20629881 a 20629881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 20642400 - 20642300
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    |||||||||||| ||||||| || | ||||||||||| |||    
T  20642400 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtctgatagaaggtctatatttataataa 20642301  T
Q  97 a 97  Q
    |    
T  20642300 a 20642300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 27832870 - 27832973
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagc-cctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||| ||||| |||||||| |||| ||||||||||||||||| || ||||||| ||| |||| |||||||||| | |||||||||||||||||||    
T  27832870 atacaaaccttagttctgttgttgcctttttaaacccttgtttcagctccactctatcacaaggtttgctctgatacacaacctatatttatagtaaaag 27832969  T
Q  100 aatc 103  Q
    ||||    
T  27832970 aatc 27832973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11757281 - 11757178
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaa-cccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagta 95  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||    ||||||||||||  ||||||||| | ||||||||||||||    
T  11757281 atacaaaccctagttttgttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagta 11757182  T
Q  96 aaag 99  Q
    ||||    
T  11757181 aaag 11757178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20299511 - 20299408
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaa-cccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagta 95  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||    ||||||||||||  ||||||||| | ||||||||||||||    
T  20299511 atacaaaccctagttttgttgttgtcattctaaaccccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagta 20299412  T
Q  96 aaag 99  Q
    ||||    
T  20299411 aaag 20299408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7349510 - 7349614
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||      ||||| ||||||||||||  ||||||||| | |||||||||||||    
T  7349510 atacaaaccctagttttgttgttgcctttctaaacccctgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagt 7349609  T
Q  95 aaaag 99  Q
    |||||    
T  7349610 aaaag 7349614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18345593 - 18345491
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctat----ctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||    ||||||||| |  ||||||||| | |||||||||||||||    
T  18345593 atacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctctatctccctcaaagttcagcctgatacaaggtctatatttatagtaa 18345494  T
Q  97 aag 99  Q
    |||    
T  18345493 aag 18345491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28485618 - 28485516
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcc----ctctctatctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||    || ||| ||||||||||||  ||||||||| | |||||||||||||||    
T  28485618 atacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccttctatctctctcaaagtttagcctgatacaaggtctatatttatagtaa 28485519  T
Q  97 aag 99  Q
    |||    
T  28485518 aag 28485516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 7092414 - 7092512
Alignment:
Q  4 caaaccctagt-tttgttgttgtctttctaaacccttgtttcagccctc----tctatctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |    ||| ||||||||||| ||||||||||| | ||||||||||||||||    
T  7092414 caaaccctagtgtttgttgttgtcattctaaacccttgtttcagccccctccatctctctcaaagtttgctctgatacaaggtctatatttatagtaaa 7092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7351889 - 7351993
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||      ||||| ||||||||||||  ||||||||| |  ||||||||||||    
T  7351889 atacaaagcctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtttatatttatagt 7351988  T
Q  95 aaaag 99  Q
    |||||    
T  7351989 aaaag 7351993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21592380 - 21592457
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaa 78  Q
    ||||||| |||| |||||||||||  |||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  21592380 atacaaatcctacttttgttgttgcatttctaaacctttgtttcagccccctctatctcaaagtttacactgatacaa 21592457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43253753 - 43253859
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcc--------ctctctatctcaaagtttactctgatacaaagcctatatttata 92  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||        |||||| ||||||||||||  ||||||||| | |||||||||||    
T  43253753 atacaaaccctagttttgttgttgtcattctaaaaccttgtttcagccctctttctctctctctctcaaagtttagcctgatacaaggtctatatttata 43253852  T
Q  93 gtaaaag 99  Q
    |||||||    
T  43253853 gtaaaag 43253859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 24465575 - 24465503
Alignment:
Q  27 tttctaaacccttgtttcagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||    
T  24465575 tttctaaacccttgtttcagccccctctatctcaaggtttacatctgatacaaagtctatatctatagtaaaa 24465503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1850033 - 1849975
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||    
T  1850033 atacaaaccctagtttttttgttgcctttctaaacccttgtttcagccccctctatctc 1849975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24817587 - 24817694
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||| | |||||| ||| |||||||||||||||||||| ||||||||||| |||||| |||||||||| | ||||||||||| | ||||    
T  24817587 atacaaaccctagttctcttgttgactt-ctaaacccttgtttcagccc-ctctatctcaaggtttacatctgatacaaggtctatatttata-ttaaag 24817683  T
Q  100 aatccctcata 110  Q
     ||||||||||    
T  24817684 tatccctcata 24817694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20297414 - 20297312
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||| |||||    ||||||||||||  ||||||||| | | |||||| ||||||    
T  20297414 atacaaaccctagttttattgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtccatatttttagtaa 20297315  T
Q  97 aag 99  Q
    |||    
T  20297314 aag 20297312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28487605 - 28487503
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||| |||||    ||||||||||||  ||||||||  | |||||||||||| ||    
T  28487605 atacaaactctagttttgttgttacctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacatggtctatatttataggaa 28487506  T
Q  97 aag 99  Q
    |||    
T  28487505 aag 28487503  T

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Target: chr7; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40946380 - 40946327
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctct 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  40946380 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctct 40946327  T

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Target: chr7; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 7094662 - 7094759
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    |||||||||  |||||||||| | |||||||||||||||||||||| |||||    ||||||||||| ||||||||||| | ||||||||||| ||||    
T  7094662 caaaccctatgtttgttgttgccattctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttataataaa 7094759  T

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Target: chr7; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38396368 - 38396320
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38396368 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccc 38396320  T

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Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1047161 - 1047219
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||    
T  1047161 atacaaaccctagttttgttgttgcttttctaaacccctgtttcagccccctctatctc 1047219  T

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Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 296
Target Start/End: Complemental strand, 9678964 - 9678867
Alignment:
Q  198 ttttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||| ||||| ||||||| |||||||  || ||||| ||||| ||||||||||||||| | || |||| ||||||||||||||||||||| |||||||    
T  9678964 ttttacgaatgaaagtgcctattctgcaacataaaattgtgctccgattttgacagcttcaacatactt-aatttctccaattttgagtcattttcaca 9678867  T

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Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 9680598 - 9680545
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  9680598 cgattttgacagcttcagcaaactt-aatttctccaattttgagtcactttcaca 9680545  T

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Target: chr7; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 11355077 - 11355013
Alignment:
Q  231 aaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||| ||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  11355077 aaatcgggctccgattttgacagcttcagcaaact-caatttcttcaattttgagtcactttcaca 11355013  T

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Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 3677301 - 3677235
Alignment:
Q  31 taaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||   |||||||||||||||||    
T  3677301 taaacccttgtttcagccc-ctctatctccaagtttactctgattcaagatctatatttatagtaaaa 3677235  T

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Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 24817852 - 24817906
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||||  || | |||||||||||||||||||||||||||||||||||||    
T  24817852 cgattttgacaaattcaacaaacttcaatttctccaattttgagtcactttcaca 24817906  T

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Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6348871 - 6348778
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttac-tctgatacaaagcctatatttatag 93  Q
    ||||||||||||||||| || ||  ||| |||||||||||||| ||| |||||||||||||| |||||| |||||||||| |  |||||||||||    
T  6348871 atacaaaccctagttttcttttttactt-ctaaacccttgttttcagtcctctctatctcaatgtttacatctgatacaaggtttatatttatag 6348778  T

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Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 1606473 - 1606424
Alignment:
Q  50 tctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||| || |||||||| | ||||||||||||||||||    
T  1606473 tctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 1606424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 30906327 - 30906396
Alignment:
Q  41 tttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcata 110  Q
    ||||||||| |||||||||||  |||||||| |||||| | |||||||||||| ||||| |||| |||||    
T  30906327 tttcagccccctctatctcaagatttactcttatacaaggtctatatttatagcaaaagtatccatcata 30906396  T

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Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 6067511 - 6067566
Alignment:
Q  83 tatatttatagtaaaagaatccctcatagattggaacaaaatcaggcccaaaaata 138  Q
    ||||||||||||||||| |||||| | | |||||||||||  ||||||||||||||    
T  6067511 tatatttatagtaaaagcatccctaaaaaattggaacaaatccaggcccaaaaata 6067566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 6332248 - 6332171
Alignment:
Q  31 taaacccttgtttc-agccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctca 108  Q
    |||||||||||||| ||||| |||| |||||| ||| ||||||||||||    ||||||||||||||||| ||||||||    
T  6332248 taaacccttgtttccagccccctctctctcaaggtt-actctgatacaagttttatatttatagtaaaagtatccctca 6332171  T

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Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 11081562 - 11081522
Alignment:
Q  2 tacaaaccctagttttgttgttgtctttctaaacccttgttt 43  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  11081562 tacaaaccctagttttgttgttggc-ttctaaacccttgttt 11081522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 24815587 - 24815620
Alignment:
Q  263 acttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||||||||||||||||| |||||||||    
T  24815587 acttcaatttctccaattttgagtgactttcaca 24815620  T

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Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 6048677 - 6048617
Alignment:
Q  49 ctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaagaatccctca 108  Q
    |||||| |||||| |||||| ||| |||||| | |||||||||||||||||| ||||||||    
T  6048677 ctctctctctcaaggtttacatctaatacaaggtctatatttatagtaaaagcatccctca 6048617  T

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Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 96)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 4 - 296
Target Start/End: Complemental strand, 3306818 - 3306521
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| || |||||| | |||||| ||||||||| | |||||||||||||||||  |||    
T  3306818 caaatcctagttttgttgttgtatttctaaacccttgtttcagccccctatatctctaggtttacactgatacaatgtctatatttatagtaaaaacatc 3306719  T
Q  104 cctcatagattggaacaaaatcaggcccaaaaa--tacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccgaatt 199  Q
     |||||| |||||||| |||||||||||| |||  || ||| |||||||||    |||||| ||||||| |||||||||||||| | |||||||||| ||    
T  3306718 tctcataaattggaaccaaatcaggcccataaaactatgttttatttttattcttctgcgcgaaatcgtgctccgattttgccagatcgtgctccgattt 3306619  T
Q  200 tt-atgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    || | ||||| ||||||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3306618 tttacgaatgaaagtgccaattctactccagaaaatcgtgctccgattttgacagctttagcaaacttcaatttctccaattttgagtcactttcaca 3306521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 6231471 - 6231172
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||  ||||| ||||||||| | |||||||||||||||||      
T  6231471 atacaaaccctagttttgttgttgcctttctaaatccttgtttcagcccgctctatctcaagatttacactgatacaatgtctatatttatagtaaaatc 6231372  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||||||||| |||||||| |||||||||||  ||||||||||| |||||||||    |||||| ||||||| |||| ||||||||| | ||||||||||    
T  6231371 atccctcataaattggaaccaaatcaggcccataaaaatacgttttatttttattcttctgcgcgaaatcgtgctccaattttgccagatcgtgctccga 6231272  T
Q  197 -attttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcac 295  Q
      ||||| ||||| ||||| ||||||| |||| |||| | ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6231271 ttttttacgaatgaaagtgtcaattctactcc-aaaagttgtgctccgattttgacagcttcagcaaacttcaatttctccaattttgagtcactttcac 6231173  T

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Target: chr3; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 3314706 - 3314407
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||| ||||||||||| |||||| |||||||||   ||||||||||||||||||     
T  3314706 atacaaaccctagttttgttgttacctttctaaacccttatttcagccccctctatctcaaggtttacactgatacaatatctatatttatagtaaaagc 3314607  T
Q  101 atccctcatagattggaacaaaatcaggccca-aaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga- 196  Q
    |||||||||| |||||| | |||||||||||| ||||||| || |||||||||    |||||  ||||||| |||||||||||||| | ||||||||||     
T  3314606 atccctcataaattggacccaaatcaggcccataaaataccttttatttttattcttctgcgtgaaatcgtgctccgattttgccagatcgtgctccgat 3314507  T
Q  197 attttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
     ||||| ||||| ||||| ||||||||||| | ||||||||||| | ||||||||||||| | ||||||||||||||| ||||||||| |||||||||||    
T  3314506 tttttacgaatgaaagtgtcaattctgctctagaaaatcgtgctcctattttgacagcttcaacaaacttcaatttcttcaattttgaatcactttcaca 3314407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 3 - 296
Target Start/End: Original strand, 51674992 - 51675290
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaat 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  |||||||| | |||||||||||||||||  ||    
T  51674992 acaaaccttagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaacgtttacattgatacaacgtctatatttatagtaaaaacat 51675091  T
Q  103 ccctcatagattggaacaaaatcaggcc--caaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga-a 197  Q
    |||||||| |||||||| ||||||| ||   ||||||||||| |||||||||    || ||  ||||||| ||| |||||||||| | ||||||||||      
T  51675092 ccctcataaattggaaccaaatcagacctataaaaatacgttttatttttattcttctacgtgaaatcgtgctctgattttgccagatcgtgctccgatt 51675191  T
Q  198 ttttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||| ||||  ||||| ||||||||||||| ||||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  51675192 ttttacgaatcaaagtgacaattctgctccagaaaatcgtgctccgattttgacagcttcagaaaacatcaatttctccaattttgagtcactttcaca 51675290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 3 - 305
Target Start/End: Complemental strand, 53591215 - 53590905
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaat 102  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| |||||| || |||||| | |||||||||||||||||| ||    
T  53591215 acaaaccctagttttgttgttgtctttctaaactcttgtttcagcctcctctatctcaaggtttacacttatacaatgtctatatttatagtaaaagcat 53591116  T
Q  103 ccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga-a 197  Q
     ||||||| || ||||| |||||||||||  ||||||||||| |||||||||    |||||| ||||| | |||||||||| ||| | | | ||||||      
T  53591115 tcctcataaatcggaaccaaatcaggcccataaaaatacgttttatttttattcttctgcgcgaaatcatgctccgatttttccagatcatcctccgatg 53591016  T
Q  198 ttttatgaatgtaagtgccaattctgctcc---aaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttca 294  Q
    ||||| ||||| ||||| ||||||||||||   |||||||||| || ||||||||||||||| ||||||||||||||||| ||||||||||| | |||||    
T  53591015 ttttacgaatgaaagtgtcaattctgctccaaaaaaaaatcgtactccgattttgacagcttcagcaaacttcaatttcttcaattttgagttattttca 53590916  T
Q  295 cagtaatatct 305  Q
    ||  |||||||    
T  53590915 caacaatatct 53590905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 890008 - 890303
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||| |||  ||||| | ||||||||||||||||||||   ||||||||||| |||||| |||||||||   ||||||||||||||||||     
T  890008 atacaaaccctaggttt--tgttgccattctaaacccttgtttcagcttcctctatctcaaggtttacactgatacaatatctatatttatagtaaaagc 890105  T
Q  101 atccctcatagattggaacaaaatcaggccca--aaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||||||||| |||||||| ||||||||||||  ||||||| || | |||||||    |||||||||||||| ||  |||||| ||||| ||||||| ||    
T  890106 atccctcataaattggaaccaaatcaggcccataaaaatacattttgtttttattcttctgcgcaaaatcgtgctatgatttttccatatcgtgctctga 890205  T
Q  197 atttt-atgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttca 294  Q
     |||| | ||||| ||||||||||||| ||||||||| | ||| | ||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  890206 ttttttacgaatgaaagtgccaattctactccaaaaatt-gtggtccgattttgacagcttcaacaaacttcaatttctccaattttgagtcactttca 890303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 47149130 - 47149454
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc----aaagtttac-tctgatacaaagcctatatttatagta 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    || |  ||| |||||||||| | ||||||||||||||    
T  47149130 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccctcaaggcctacatctgatacaaggtctatatttatagta 47149229  T
Q  96 aaag-aatccctcatagattggaacaaaatcaggccca--aaaatacgttctatttttatga--ctgcgcaaaatcgtactccg---------------- 174  Q
    |||| ||||||||||| |||||||| |||||| |||||  |||||||||| |||||||||    |||||| |||||||||||||                    
T  47149230 aaagcaatccctcataaattggaaccaaatcaagcccataaaaatacgttttatttttattcttctgcgcgaaatcgtactccgtaccagatcgtgctcc 47149329  T
Q  175 -attttgccataccgtgctccgaattttat--gaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatt 271  Q
     ||||| ||| | |||||||||| |||| |  ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  47149330 gattttaccagatcgtgctccgatttttttacgaatgaaagtgtcaattctgctccaaaaaatcgtgctccgattttgacagcttcatcaaacttcaatt 47149429  T
Q  272 tctccaattttgagtcactttcaca 296  Q
    |||||||||||||||||||||||||    
T  47149430 tctccaattttgagtcactttcaca 47149454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 880687 - 880922
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| | |||||||| |||||||||| || ||||||||||| |||||| ||||||||| | ||||||||||||||||||     
T  880687 atacaaaccctagttttgttgttgccattctaaactcttgtttcagacccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagc 880786  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||||||||| |||||||| |||||||||||  ||||||||||| |||||||||    |||||| ||||||| | |||||||||||| | ||| ||||||    
T  880787 atccctcataaattggaaccaaatcaggcccataaaaatacgttttatttttattcttctgcgcgaaatcgtgcgccgattttgccagatcgtactccga 880886  T
Q  197 -attttatgaatgtaagtgccaattctgctccaaaa 231  Q
      ||||| ||||| ||||| ||||||| ||||||||    
T  880887 ttttttacgaatgaaagtgtcaattctactccaaaa 880922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 28761663 - 28761787
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| ||||| ||||||||||||||||||     
T  28761663 atacaaaccctagttttgttgttgtctttctaaacccttgtttcaaccccctctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagt 28761762  T
Q  101 atccctcatagattggaacaaaatc 125  Q
    |||||||||| ||||||||||||||    
T  28761763 atccctcataaattggaacaaaatc 28761787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 54691809 - 54691978
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||| | ||||||||| |||||||| | ||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  54691809 atacaaaccctagttttgttgtcgcctttctaaaaccttgttttacccc-ctctatcttaaggtttactctgatacaaagcctatatttatagtaaaaga 54691907  T
Q  101 atccctcatagattggaacaaaatcaggccc-aaaaatacgttctatttttatga--ctgcgcaaaatcgt 168  Q
    |||| ||||| ||||||||||||| |||||| ||||||| ||| |||||||||||  ||||||||||||||    
T  54691908 atccttcataaattggaacaaaattaggcccaaaaaatatgttttatttttatgactctgcgcaaaatcgt 54691978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 31151370 - 31151120
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||||||||||||| ||||||  ||||||||||||||||| |||||| ||||||||| | |||||| |||||||||||| |||||||||||||||||    
T  31151370 atacaaaccctagttttcttgttga-tttctaaacccttgttttcagccccctctatctcgaggtttacatctgatacaaagtctatatttatagtaaaa 31151272  T
Q  99 gaatccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatg--actgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    | |||||||||| |||| |||||||| ||||||| ||| | ||| ||||||||||   |||||| |||| || |||| ||||||||| | | ||||||||    
T  31151271 gcatccctcataaattgtaacaaaataaggcccataaaaatgttttatttttatgcttctgcgcgaaattgtgctccaattttgccagatcatgctccga 31151172  T
Q  197 -attttatgaat-gtaagtgccaattctgctccaaaaaatcgtgcttcgattt 247  Q
     |||||| |||| | |||||||||||||||| | |||||||||||| ||||||    
T  31151171 tattttacgaatgggaagtgccaattctgct-ctaaaaatcgtgctccgattt 31151120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1626918 - 1627020
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  1626918 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaaga 1627017  T
Q  101 atc 103  Q
    |||    
T  1627018 atc 1627020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11170426 - 11170328
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  11170426 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 11170328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24979729 - 24979631
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||||||| ||||    
T  24979729 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttactctgatacaaggtatatatttatagtgaaag 24979631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 28137532 - 28137633
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaat 102  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  28137532 acaaactctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaacgcatatatttatagtaaaagaat 28137631  T
Q  103 cc 104  Q
    ||    
T  28137632 cc 28137633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28100276 - 28100379
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||| | |||||||||||||| || ||||||||||||||||||    
T  28100276 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaagggttactctgatacaacgcttatatttatagtaaaaga 28100375  T
Q  101 atcc 104  Q
    ||||    
T  28100376 atcc 28100379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28102237 - 28102340
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||||| |||||| || ||||||||||||||||||    
T  28102237 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaagggttactctaatacaacgcttatatttatagtaaaaga 28102336  T
Q  101 atcc 104  Q
    ||||    
T  28102337 atcc 28102340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 47701830 - 47701933
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| |||||| ||||||||| | |||||||||||||||||||    
T  47701830 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggtttacactgatacaatgtctatatttatagtaaaaga 47701929  T
Q  101 atcc 104  Q
    ||||    
T  47701930 atcc 47701933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3859550 - 3859452
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  3859550 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 3859452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4308516 - 4308614
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  4308516 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 4308614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11163172 - 11163074
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||||| |||||||    
T  11163172 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatcgtaaaag 11163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15780882 - 15780784
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  15780882 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctccaagtttactctgatacaaggtctatatttatagtaaaag 15780784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 23633481 - 23633360
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||| |||||| ||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  23633481 atacaaaccctagttttcttgttggctt-ctaaatccttgttttagccctctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 23633383  T
Q  101 atccctcat-agattggaacaaa 122  Q
    ||||||||| | |||||||||||    
T  23633382 atccctcataaaattggaacaaa 23633360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45882961 - 45882863
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||| | ||||||||||||||||||    
T  45882961 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcatagtttactatgatacaaggtctatatttatagtaaaag 45882863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 5522852 - 5522948
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  5522852 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 5522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6561832 - 6561740
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatag 93  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||| | ||||||||||||    
T  6561832 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaggtctatatttatag 6561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5926999 - 5927101
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||| | ||||||| | |||||||||||||||||||    
T  5926999 atacaaactctagttttgttgttgcatttctaaacccttgtttcagccctctctatctcaaggtttacaccgatacaatgtctatatttatagtaaaaga 5927098  T
Q  101 atc 103  Q
    |||    
T  5927099 atc 5927101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26720570 - 26720472
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  26720570 atacaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 26720472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35777443 - 35777345
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||| || |||||||| | ||||||||||||||||||    
T  35777443 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaag 35777345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 43421650 - 43421799
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||  |||||||||| |||||| ||||||||| | ||||||||||||||||| |    
T  43421650 atacaaaccctagttttgttgttgcctttctaaacccttgtttcaaccccttctatctcaaggtttacactgatacaatgtctatatttatagtaaaaaa 43421749  T
Q  101 atccctcat-agattggaacaaaatcaggcccaaaaatacgttctatttt 149  Q
     |||   || | | |||||||||   ||||||||||||||||||||||||    
T  43421750 gtcctcaataaaactggaacaaatctaggcccaaaaatacgttctatttt 43421799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28181044 - 28180943
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||    
T  28181044 atacaaaccctagttttgttgttgtctttctaaacc--tatttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaaga 28180947  T
Q  101 atcc 104  Q
    ||||    
T  28180946 atcc 28180943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6066031 - 6066130
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcag-ccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| || |||||||| | ||||||||||||||||||    
T  6066031 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 6066130  T

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Target: chr3; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12268200 - 12268299
Alignment:
Q  1 atacaaaccctagtttt-gttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||   ||||||||||||||||||    
T  12268200 atacaaaccctagtttttgttgttgtctttctaaactcttgtttcagctccctctatctcaaagtttactctgatacaagttctatatttatagtaaaag 12268299  T

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Target: chr3; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43423698 - 43423797
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||  |||||||| | |||||||||||||||||||    
T  43423698 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctttctcaaggtttacagtgatacaatgtctatatttatagtaaaaga 43423797  T

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Target: chr3; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5191675 - 5191577
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||  ||||||| | ||||||||||||||||||    
T  5191675 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgcttagatacaaggtctatatttatagtaaaag 5191577  T

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Target: chr3; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22114540 - 22114638
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  22114540 atacaaaccctagttttgtttttgcctttctaaacccttgtttcagccccttctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 22114638  T

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Target: chr3; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 35918184 - 35918282
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| || |||||||| | ||||||||||||| ||||    
T  35918184 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttgctatgatacaaggtctatatttatagtgaaag 35918282  T

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Target: chr3; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 48361906 - 48362003
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| || |||||||||||||||| |||||||| | ||||||||||||||||||    
T  48361906 atacaaaccctagttttgttgttgtcattctaaacc-ttgtttcagccccctgtatctcaaagtttactatgatacaaggtctatatttatagtaaaag 48362003  T

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Target: chr3; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 51727241 - 51727339
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  51727241 atacataccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 51727339  T

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Target: chr3; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 53915731 - 53915829
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||||| || |||||||||||| ||| | ||||||||||||||||||    
T  53915731 atacaaaccctagttttgttgttgtcatcctaaacccttgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaag 53915829  T

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Target: chr3; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6063681 - 6063781
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||| || |||||||| | |||||||||||||||||    
T  6063681 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctttgatacaaggtctatatttatagtaaaa 6063780  T
Q  99 g 99  Q
    |    
T  6063781 g 6063781  T

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Target: chr3; HSP #42
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10956262 - 10956359
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||  | |||||||||||||||| | |||||||||||||||||    
T  10956262 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatcttcatgtttactctgatacaaggtctatatttatagtaaaa 10956359  T

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Target: chr3; HSP #43
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10958558 - 10958655
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||  | |||||||||||||||| | |||||||||||||||||    
T  10958558 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctttatgtttactctgatacaaggtctatatttatagtaaaa 10958655  T

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Target: chr3; HSP #44
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36011849 - 36011746
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||||||| || |||||||| |||||| || |||||| | |||||||||||||||||||    
T  36011849 atacaaaccttagtttcgttgttgtctttctaaatccttgtttcagccccctttatctcaaggtttacactaatacaatgtctatatttatagtaaaaga 36011750  T
Q  101 atcc 104  Q
    ||||    
T  36011749 atcc 36011746  T

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Target: chr3; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 43228313 - 43228215
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||| ||||    
T  43228313 atacaaacgctagttttgttgttgcctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaag 43228215  T

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Target: chr3; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 51943393 - 51943295
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| | ||||||||| | |||||||||||| ||| | ||||||||||||||||||    
T  51943393 atacaaaccctagttttgttgttgcctttctaaacctttgtttcagcaccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 51943295  T

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Target: chr3; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 53917899 - 53917997
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||| ||| ||||||| ||||| |||||| ||| | ||||||||||||||||||    
T  53917899 atacaaaccctagttttgttgttgtcattctaaaccattgtttcagccccctccatctcaaggtttaatctgattcaaggtctatatttatagtaaaag 53917997  T

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Target: chr3; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 1321438 - 1321365
Alignment:
Q  26 ctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  1321438 ctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaag 1321365  T

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Target: chr3; HSP #49
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4104130 - 4104232
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||||  ||||||||| | |||||||||||||||    
T  4104130 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaa 4104229  T
Q  97 aag 99  Q
    |||    
T  4104230 aag 4104232  T

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Target: chr3; HSP #50
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18162685 - 18162588
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactc-tgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||| |||||||||| |||||||| | ||||||||||||||||||    
T  18162685 atacaaaccctagttttgttgttgcctttctaaacccttgtttcatcc--ctctatctccaagtttactcatgatacaaggtctatatttatagtaaaag 18162588  T

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Target: chr3; HSP #51
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 43226098 - 43226010
Alignment:
Q  11 tagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||| ||||    
T  43226098 tagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaag 43226010  T

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Target: chr3; HSP #52
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18097135 - 18097234
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc-aaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||||  ||||||||| |||||||| | ||||||||||||||||||    
T  18097135 atacaaaccctagttttgttgttgccattctaaacccttgtttgagccccctctatctctcaagtttactatgatacaaggtctatatttatagtaaaag 18097234  T

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Target: chr3; HSP #53
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18099405 - 18099503
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc-aaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||  |||||||||||||||||| | ||||| ||||||||||||    
T  18099405 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctcaagtttactctgatacaaggtctata-ttatagtaaaag 18099503  T

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Target: chr3; HSP #54
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1313431 - 1313334
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | || |||||| |||||||||||| ||||||||||| |||||||||||| ||| | ||||||||||||||||||    
T  1313431 atacaaaccctagttttgttgttgccattgtaaacc-ttgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttatagtaaaag 1313334  T

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Target: chr3; HSP #55
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 50494021 - 50493923
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||  ||||| || |||||||| | ||||||||||||| ||||    
T  50494021 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctcagtttgctttgatacaaggtctatatttatagtgaaag 50493923  T

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Target: chr3; HSP #56
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 53597261 - 53597121
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||| |||||||||| |||||| |||  ||||||||||||||| ||| ||||||||||| |||||||||||||||| | ||||||||||||||||||     
T  53597261 atacaacccctagttttcttgttgactta-taaacccttgtttcatccc-ctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagt 53597164  T
Q  101 atccctcat-agattggaacaaaatcaggcccaaaaatacgtt 142  Q
    ||||||||| | ||||||||| | |   |||||||||||||||    
T  53597163 atccctcataaaattggaacatatttcagcccaaaaatacgtt 53597121  T

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Target: chr3; HSP #57
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 455929 - 455827
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    |||||| |||||  ||||||||| | |||||||||||||||    
T  455929 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaa 455830  T
Q  97 aag 99  Q
    |||    
T  455829 aag 455827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 458306 - 458204
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    |||||| |||||  ||||||||| | |||||||||||||||    
T  458306 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaggtttagcctgatacaaggtctatatttatagtaa 458207  T
Q  97 aag 99  Q
    |||    
T  458206 aag 458204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23637048 - 23636940
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||| |||||| ||| |||||||||||||| ||||  ||||||||||| ||||||||||||||||||  |||||||||| |||||      
T  23637048 atacaaaccctagttttcttgttggctt-ctaaacccttgttttagcctcctctatctcaaggtttactctgatacaaagtatatatttatattaaaatt 23636950  T
Q  101 atccctcata 110  Q
    ||||||||||    
T  23636949 atccctcata 23636940  T

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Target: chr3; HSP #60
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 27635862 - 27635959
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||||| ||||||||| || ||| | |||||||| ||||||||    
T  27635862 atacaaaccctagttttgttgtttgcattctaaacccttgtttcagccccctctatctcaaggtttactctaattcaaggtctatatttgtagtaaaa 27635959  T

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Target: chr3; HSP #61
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 32219115 - 32219026
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttata 92  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| || ||||||| | |||||||||||    
T  32219115 acaaactctagttttgttgttgcctttctgaacccttgtttcagccccctctatctcaaagtttagtcagatacaaggtctatatttata 32219026  T

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Target: chr3; HSP #62
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32264274 - 32264376
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaag----tttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||  |||||||||||||| |||||||||||||||||| ||||| |||||||||||||    ||||||||||||||| | |||||||||||||||    
T  32264274 atacaaactttagttttgttgttgcctttctaaacccttgtttgagccccctctatctcaaagttaatttactctgatacaaggtctatatttatagtaa 32264373  T
Q  97 aag 99  Q
    |||    
T  32264374 aag 32264376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 53468702 - 53468793
Alignment:
Q  13 gttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    |||||||||||| | |||||||||||||||||||||| || ||||| || |||||| ||||||||| | |||||||||||||||||||||||    
T  53468702 gttttgttgttgccattctaaacccttgtttcagccccctttatctaaaggtttacactgatacaatgtctatatttatagtaaaagaatcc 53468793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39715491 - 39715394
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||| ||||| || ||||||||||| ||||||||| ||||||||||| |||||| ||||||||| | |||||||||||| |||||    
T  39715491 atacaaaccctagttttggtgttgcctctctaaacccttatttcagccc-ctctatctcaaggtttacactgatacaatgtctatatttatagcaaaag 39715394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 746779 - 746675
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||      ||||| ||||||||||||  ||||||||| | |||||||||||||    
T  746779 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagt 746680  T
Q  95 aaaag 99  Q
    |||||    
T  746679 aaaag 746675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10084624 - 10084726
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||| |||||    ||||||||||| ||| ||||||| | |||||||||||||||    
T  10084624 atacaaaccctagttttgttattgcctttctaaacccttgttccagccccctctatctctctcaaagtttgctccgatacaaggtctatatttatagtaa 10084723  T
Q  97 aag 99  Q
    |||    
T  10084724 aag 10084726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 25533464 - 25533358
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcc--------ctctctatctcaaagtttactctgatacaaagcctatatttata 92  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||        |||||| ||||||||||||  ||||||||| | |||||||||||    
T  25533464 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctctcaaagtttagcctgatacaaggtctatatttata 25533365  T
Q  93 gtaaaag 99  Q
    |||||||    
T  25533364 gtaaaag 25533358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 4560502 - 4560606
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaat 102  Q
    |||||| ||||||||||||||  |||| |||||| |||||||||||| ||||||||||| ||||||| ||||||| || ||||| ||||||| |||| ||    
T  4560502 acaaactctagttttgttgttacctttataaaccattgtttcagccccctctatctcaatgtttactatgatacatagtctatacttatagtgaaagtat 4560601  T
Q  103 ccctc 107  Q
    |||||    
T  4560602 ccctc 4560606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30005863 - 30005805
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  30005863 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 30005805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42990326 - 42990268
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  42990326 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctc 42990268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 27101416 - 27101518
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaa----agtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||| |    | ||| ||||||||||| | ||||||||||||| |    
T  27101416 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagcctcctctatctctatctcaatttgctctgatacaaggtctatatttatagtga 27101515  T
Q  97 aag 99  Q
    |||    
T  27101516 aag 27101518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 42992308 - 42992206
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc----aaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    ||||||||   |||||||| |  ||||||||||||||    
T  42992308 atacaaaccctagttttgttgttgcctttttaaacccttgtttcagccccctctatctctcttaaagtttagcatgatacaaggtatatatttatagtaa 42992209  T
Q  97 aag 99  Q
    |||    
T  42992208 aag 42992206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38890062 - 38889963
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc----aaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||    ||||||| ||   |||||| | |||||||||||||||    
T  38890062 atacaaaccctaattttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgct---atacaaggtctatatttatagtaa 38889966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38210392 - 38210334
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  38210392 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctc 38210334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 54692046 - 54692108
Alignment:
Q  234 tcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||    
T  54692046 tcgtgcttcgattttgacaactccagcaaacttcaatttctccaattttaagtcactttcaca 54692108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 10191548 - 10191646
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccc----tctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||    | ||| ||||||||||| ||| ||||||| | ||||||||||||||||||    
T  10191548 aaaccctagttttgttattgcctttctaaacccttgttccagccccctttatctctctcaaagtttgctccgatacaaggtctatatttatagtaaaag 10191646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 13420437 - 13420557
Alignment:
Q  31 taaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaaatcaggcc 130  Q
    ||||||||||||||||||  || |||||||| |||| || ||||||||| ||||||||||||||||||| |||| ||||| | | |||  |||||  |||    
T  13420437 taaacccttgtttcagcctcctatatctcaaggtttgctttgatacaaaacctatatttatagtaaaagtatccttcataaaattgaaacaaatccagcc 13420536  T
Q  131 caaaaatacgttctatttttat 152  Q
    | |||||||||| |||||||||    
T  13420537 c-aaaatacgttatatttttat 13420557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41849174 - 41849117
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatct 58  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||    
T  41849174 atacaaaccctagttttgttgttgttattctaaacccttgtttcagccccctctatct 41849117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 54884170 - 54884037
Alignment:
Q  10 ctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcat 109  Q
    ||||||||||||||| |||||||||||||||||  ||| | ||||||||||| ||||||  |||| ||| |  ||||||||| ||||||||||||   ||    
T  54884170 ctagttttgttgttgcctttctaaacccttgttcgagctccctctatctcaaggtttacaatgatccaatgtttatatttatggtaaaagaatcctcaat 54884071  T
Q  110 -agattggaacaaaatcaggcccaaaaatacgtt 142  Q
     | ||||||||||| | |||||| ||||||||||    
T  54884070 aaaattggaacaaatttaggcccgaaaatacgtt 54884037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 6484373 - 6484309
Alignment:
Q  35 cccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||| |||||    
T  6484373 cccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagcaaaag 6484309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10621765 - 10621823
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| | |||||||||    
T  10621765 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagcaccctctatctc 10621823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 24177301 - 24177196
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||| |||||| | | |||||| ||||||| |||||| ||||| ||||| ||||||| |||||||| | ||||||||||| ||||||    
T  24177301 atacaaaccctagttttcttgttgacat-ctaaactcttgttttcagccccctctagctcaatgtttactatgatacaaggtctatatttataataaaag 24177203  T
Q  100 aatccct 106  Q
     ||||||    
T  24177202 tatccct 24177196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25388928 - 25388870
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||    
T  25388928 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagctctctctctctc 25388870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29956708 - 29956650
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||| |||||||||    
T  29956708 atacaaaccctaattttgttgttgaatttctaaacccttgtttcagccccctctatctc 29956650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9604842 - 9604899
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  9604842 atacaaatcctagttttgttgttgcctttctaaa-ccttgtttcagccccctctatctc 9604899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 4666545 - 4666488
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctca 60  Q
    |||||||||| ||||||||||||||| ||| |||||| ||||||||| ||||||||||    
T  4666545 acaaaccctatttttgttgttgtcttactagacccttctttcagccccctctatctca 4666488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 1618896 - 1619015
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctc--aaagtttactctgatacaaagcctatatttatagtaaaagaa 101  Q
    |||||||||||| |||||| | ||||||||||||||||| |||||| |||| ||||  || ||||||| || ||||| | ||||||||||||| |||| |    
T  1618896 aaaccctagttt-gttgtt-tgtttctaaacccttgttttcagccccctctgtctctcaaggtttactatggtacaaggtctatatttatagtcaaagta 1618993  T
Q  102 tccctcat-agattggaacaaa 122  Q
    |||||||| | |||||||||||    
T  1618994 tccctcataaaattggaacaaa 1619015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 6719394 - 6719444
Alignment:
Q  49 ctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||| ||||||||||| ||||||||||| | ||||||||||||||||||    
T  6719394 ctctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaag 6719444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 25635374 - 25635320
Alignment:
Q  69 tctgatacaaagcctatatttatagtaaaagaatccctcat-agattggaacaaa 122  Q
    |||||||||||| |||||||||||||||||| ||||||||| | |||||||||||    
T  25635374 tctgatacaaagtctatatttatagtaaaagcatccctcataaaattggaacaaa 25635320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 880953 - 881004
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttca 294  Q
    ||||||||||||||| | |||||||||| |||||| |||||||||||||||||    
T  880953 cgattttgacagcttcaacaaacttcaacttctcc-attttgagtcactttca 881004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 4663879 - 4663839
Alignment:
Q  63 gtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  4663879 gtttactctgatacaatgtctatatttatagtaaaagaatc 4663839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 7768530 - 7768395
Alignment:
Q  69 tctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaaa-tcaggcccaaaaatacgttctatttttatgact--gcgcaaaat 165  Q
    |||||||||| || ||||||||||||||||  |||||| | | |||||||||||  ||| ||  ||||||| ||| || ||||||   |  |||||||||    
T  7768530 tctgatacaaggcttatatttatagtaaaaacatccctaaaaaattggaacaaatctcacgctgaaaaatatgttttaattttatcgtttagcgcaaaat 7768431  T
Q  166 cgtactccgattttgccataccgtgctccgaatttt 201  Q
    |||||| ||||||||||||||| |||| ||| ||||    
T  7768430 cgtactacgattttgccataccatgctacgattttt 7768395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 296
Target Start/End: Complemental strand, 23636764 - 23636730
Alignment:
Q  262 aacttcaatttctccaattttgagtcactttcaca 296  Q
    |||| ||||||||||||||||||||||||||||||    
T  23636764 aactccaatttctccaattttgagtcactttcaca 23636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 29956638 - 29956588
Alignment:
Q  49 ctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||| ||||    
T  29956638 ctctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaag 29956588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 30005793 - 30005743
Alignment:
Q  49 ctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||| ||||||||||| |||| |||||||| ||||||||||||| ||||    
T  30005793 ctctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaag 30005743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 53896475 - 53896529
Alignment:
Q  45 agccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||| |||||||||||||||| || |||||||| | ||||||||||||| ||||    
T  53896475 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtgaaag 53896529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 136; Significance: 7e-71; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 79910 - 79715
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||  |||||||||||||||||||    
T  79910 atacaaaccctagttttattgttgtctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaaaaactatatttatagtaaaaga 79811  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatgactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||| ||| |||||||||||||| | ||||||||||    
T  79810 atccctcataaattggaacaaaatcaggcccaaaaatacgttttatttttctgactacgctaaaccgtgctccgattttgccagatcgtgctccga 79715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 79726 - 79664
Alignment:
Q  233 atcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  79726 atcgtgctccgattttgacagcttcagcaaact-caatttctccaattttgagtcactttcaca 79664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 3 - 247
Target Start/End: Complemental strand, 17318933 - 17318684
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaat 102  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||||| |||    
T  17318933 acaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactatgatacaaaacctatatttatagtaaaaaaat 17318834  T
Q  103 ccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatgact--gcgcaaaa-tcgtactccgattttgccataccgtgctccgaatt 199  Q
    |||||||| ||||||||||||||||| | ||||||||||| |||||||||||||  |||||||| ||| ||||||||||||||| | |||||||||| ||    
T  17318833 ccctcataaattggaacaaaatcaggtctaaaaatacgttttatttttatgactctgcgcaaaaatcgcactccgattttgccagatcgtgctccgattt 17318734  T
Q  200 tt-atgaatgtaag-tgccaattctgctccaaaaaatcgtgcttcgattt 247  Q
    || | ||||| ||  || |||||||| |||||||||| ||||||||||||    
T  17318733 tttacgaatggaaactgtcaattctggtccaaaaaattgtgcttcgattt 17318684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 50307786 - 50308074
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||  | |||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  50307786 atacaaaccctagttttgttattgcctttctaaacccttttttcagccccatatatctcaaggtttactttgatacaaagcttatatttatagtaaaaga 50307885  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgtgctccga-a 197  Q
    ||||||| || |||| |||||||||||||||||||| | ||| ||||||| |||  |||||||||||||||||| |||||||||| | |||||| |||      
T  50307886 atccctcgtaaattgtaacaaaatcaggcccaaaaa-aagttttatttttctgaatctgcgcaaaatcgtactctgattttgccagatcgtgcttcgatt 50307984  T
Q  198 ttttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||| |||||        |||| ||||||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  50307985 ttttacgaatg--------aattatgctccaaaaaatcgtgctccaattttgacagcttcagcaaac-tcaatttctccaattttgagtcactttcaca 50308074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 50076911 - 50077190
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| ||||||||| | ||||||||||||||||||     
T  50076911 atacaaaccctagttttgttgttgtctttctaaatccttgtttcagccctttctatctcaaggtttacactgatacaatgtctatatttatagtaaaagc 50077010  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||||||||| |||||||| |||||||||||  |||||||| || |||||||||    |||||||||||||| ||||||||                       
T  50077011 atccctcataaattggaaccaaatcaggcccataaaaatacattttatttttattcttctgcgcaaaatcgtgctccgatt------------------- 50077091  T
Q  197 attttatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
     ||||| ||||  ||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  50077092 -ttttacgaattaaagtgccaaatctgctccaaaaaatcgtgctccgattttgacagcttcaacaaacttcaatttctctaattttgagtcactttcaca 50077190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 11457714 - 11457950
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||| | ||||||||||||||||||     
T  11457714 atacaaaccctagttttgttgttgtctttctaaaccattgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagc 11457813  T
Q  101 atccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccga 196  Q
    |||||||||| |||||||| ||||||| |||  ||||||||||| |||||||||    |||||| ||||||| |||||||||||| | | |||||||| |    
T  11457814 atccctcataaattggaaccaaatcagacccataaaaatacgttttatttttattcttctgcgcgaaatcgtgctccgattttgctagatcgtgctccaa 11457913  T
Q  197 -attttatgaatgtaagtgccaattctgctccaaaaa 232  Q
      |||||  |||| ||||| |||||||||||||||||    
T  11457914 ttttttacaaatgaaagtgtcaattctgctccaaaaa 11457950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 40133986 - 40133661
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccct---------ctctatctcaaagtttactctgatacaaagcctatatttat 91  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||||          || ||||||||  ||||||||||||||||||||||||||||    
T  40133986 atacaaaccttcgttttgttgttgtcattctaaacccttgtttcagcccctttcagcccctatatctcaagatttactctgatacaaagcctatatttat 40133887  T
Q  92 agtaaaagaatccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga--ctgcgcaaaatcgtactccgattttgccataccgt 189  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||  ||| |||||||||||   ||||||||||||||||| |||||||||| | |||    
T  40133886 agtaaaagaatccctcataaattggaacaaaatcaggccaaaaaat--gttttatttttatgattatgcgcaaaatcgtactctgattttgccagatcgt 40133789  T
Q  190 gctccga-attttatgaat-gtaagtgccaattctgctccaaa-------------------aaatcgtgcttcgattttgacagcttaagcaaacttca 268  Q
    |||||||  |||||  ||| | ||||||||||| |||||||||                   |||||||||| ||||||||||||||| |||||||||||    
T  40133788 gctccgattttttaccaatggaaagtgccaattatgctccaaaagtcgtactccgatttttcaaatcgtgctccgattttgacagcttcagcaaacttca 40133689  T
Q  269 atttctccaattttgagtcactttcaca 296  Q
    ||||||| ||||||||||||||||||||    
T  40133688 atttctctaattttgagtcactttcaca 40133661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 247
Target Start/End: Original strand, 50079063 - 50079310
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||| || |||||| | |||||||||||||||||| |||    
T  50079063 caaaccctagttttgttgctgtctttctaaacccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaagcatc 50079162  T
Q  104 cctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat--gactgcgcaaaatcgtactccgattttgccataccgtgctccgaatt 199  Q
    ||||||| ||| |||| |||||||  ||  ||||||||||| |||||||||    | |||| ||||||| |||||||||||||| | |||||||||| ||    
T  50079163 cctcataaatttgaaccaaatcagatccataaaaatacgttttatttttattcttcagcgcgaaatcgtgctccgattttgccagatcgtgctccgattt 50079262  T
Q  200 t-tatgaatgtaagtgccaattctgctccaaaaaatcgtgcttcgattt 247  Q
    | || ||||| ||||||||| |||||||| |||||||||||| ||||||    
T  50079263 tctacgaatgaaagtgccaaatctgctcc-aaaaatcgtgctccgattt 50079310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25251514 - 25251616
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| |    
T  25251514 atacaaaccctagttttgttgttgtctttctaaacctttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaaaa 25251613  T
Q  101 atc 103  Q
    |||    
T  25251614 atc 25251616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 28207307 - 28207403
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  28207307 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 28207403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13215123 - 13215025
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  13215123 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaag 13215025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28998492 - 28998590
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  28998492 atacaaaccctagttttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaag 28998590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29004208 - 29004306
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  29004208 atacaaaccctagttttgttgttgtcattctaaacccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaag 29004306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41646962 - 41646864
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  41646962 atacaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 41646864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2617558 - 2617459
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| | ||||||||||||| |||||    
T  2617558 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcctcctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaaga 2617459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 12302744 - 12302903
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttac-tctgatacaaagcctatatttatagta 95  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||    |||||| |||||| |||||||||| | ||||||||||||||    
T  12302744 atacaaaccctagttttgttgttgcatttctaaacccttgtttcagccccctctatctctctcaaggtttacatctgatacaaggtctatatttatagta 12302843  T
Q  96 aaag-aatccctcatagattggaacaaaatcaggccc--aaaaatacgttctatttttat 152  Q
    |||| ||||||||||| |||||||| |||||||||||  |||||||| || |||||||||    
T  12302844 aaagtaatccctcataaattggaaccaaatcaggcccataaaaatacattttatttttat 12302903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13761879 - 13761781
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  13761879 atacaaaccctagttatgttgttgcctttctaaacccttgtttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 13761781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20302501 - 20302403
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||||| ||||||    
T  20302501 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttataataaaag 20302403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38925717 - 38925815
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  38925717 atacaaaccctagttttgttgttgcctttctgaactcttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 38925815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 51750081 - 51749983
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  51750081 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 51749983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 25248756 - 25248856
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||| |||| ||||    
T  25248756 caaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttctagaaaaaaaatc 25248855  T
Q  104 c 104  Q
    |    
T  25248856 c 25248856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9241325 - 9241466
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctc-tctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||    
T  9241325 atacaaaccctagttttgttgttgcctttctaaacc-ttgtttcagcccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaag 9241423  T
Q  100 aatccctcat-agattggaacaaaatcaggcccaaaaatacgtt 142  Q
     | ||| ||| | |||||||| ||||| | ||||||||||||||    
T  9241424 taacccccataaaattggaac-aaatctgacccaaaaatacgtt 9241466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17186367 - 17186470
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||  ||||||||||| |||||||    
T  17186367 atacaaaccctagttttgttgttgcctttctaaacccttatttcagccccctctatctcaaggtttgctctgatacaaaatctatatttatattaaaaga 17186466  T
Q  101 atcc 104  Q
    ||||    
T  17186467 atcc 17186470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6823057 - 6822959
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||  ||||||||||    
T  6823057 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaag 6822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15823588 - 15823490
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || |||||| ||||||||| |||||||| | ||||||||||||||||||    
T  15823588 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctctaagtttactttgatacaaggtctatatttatagtaaaag 15823490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 31423117 - 31423211
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| || |||||||||||||||||    
T  31423117 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgcttatatttatagtaaaag 31423211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47451690 - 47451592
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| | ||| |||||||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  47451690 atacaaaccctagttttgttgttgccattccaaacccttgtttaagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaag 47451592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16428695 - 16428590
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |  |||| |||||||| ||| |||||||||||||||||||     
T  16428695 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctaatggtttgctctgatataaaacctatatttatagtaaaagt 16428596  T
Q  101 atccct 106  Q
    ||||||    
T  16428595 atccct 16428590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 18307151 - 18307054
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||| ||||    
T  18307151 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaa 18307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31489957 - 31489854
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||| |||||| || |||||| | |||||||||||||||||||    
T  31489957 atacaaaccctagttttgttgttacctttctaaacccttgtttcaaccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaaga 31489858  T
Q  101 atcc 104  Q
    ||||    
T  31489857 atcc 31489854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10400067 - 10400165
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  ||||| ||||||||||| | |||||||||||| |||||    
T  10400067 atacaaaccctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcccagtttgctctgatacaaggtctatatttatagaaaaag 10400165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 39462561 - 39462463
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  39462561 atacaaaccctagttttgtttttgcatttctaaacctttgtttcagccttctctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 39462463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28842537 - 28842437
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||| ||||||||||| |  ||||||||||||||||    
T  28842537 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaa 28842438  T
Q  99 g 99  Q
    |    
T  28842437 g 28842437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6823927 - 6823828
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcag-ccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||| | ||||||  ||||||||||    
T  6823927 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagcccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaag 6823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 18839629 - 18839526
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||  ||||||  | |||||| | |||||||||||||||||||    
T  18839629 atacaaaccctagttttgttgttgcctatctaaacccttgtttcagccccctctatctcatggtttacaataatacaatgtctatatttatagtaaaaga 18839530  T
Q  101 atcc 104  Q
    ||||    
T  18839529 atcc 18839526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 49495468 - 49495547
Alignment:
Q  31 taaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcata 110  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  49495468 taaacccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcata 49495547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16226209 - 16226111
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||||||||  ||||||||||||||||| || || |||||||||||||||| || |||||||| | ||||||||||||||||||    
T  16226209 atacaaaccctagttttgttgttgcttttctaaacccttgttttagacccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16226111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20291499 - 20291401
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | | |||||||||||| ||| |||| |||||| | ||||||||||||||||||    
T  20291499 atacaaaccctagttttgttgttgcctttctaaacccttgtttcatctccctctatctcaaaatttgctctaatacaaggtctatatttatagtaaaag 20291401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 42922275 - 42922154
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||| |||||| ||| |||||||||| ||||| ||| |||||||| || |||||||||||||||||  ||||||||||||||||||     
T  42922275 atacaaaccctagttttcttgttgactt-ctaaacccttatttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagt 42922177  T
Q  101 atccctcataga-ttggaacaaa 122  Q
    |||||||||| | ||||||||||    
T  42922176 atccctcataaatttggaacaaa 42922154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 50248821 - 50248914
Alignment:
Q  11 tagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    ||||||||||||||||||| |||||| |||||||||| | ||||||||||| |||||| ||||||||| | |||||||||||||||||||||||    
T  50248821 tagttttgttgttgtctttttaaacctttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagaatcc 50248914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 14183852 - 14183928
Alignment:
Q  28 ttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||  | |||||||||||||||||||||||    
T  14183852 ttctaaacccttgtttcagccctctctatctcaaggtttactctgatacatggtctatatttatagtaaaagaatcc 14183928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 16231641 - 16231545
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||| ||||||  |||||| |||||||||||||||| |||||||||||||||| || |||||||| | ||||||||||||||||||    
T  16231641 acaaaccctagttttcttgttgcttttctagacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 16231545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 17324096 - 17324004
Alignment:
Q  12 agttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatcc 104  Q
    ||||||||||| | |||||| ||||||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||    
T  17324096 agttttgttgtggcctttctgaacccttgttttagccctctctatctcaaggtttactctaatacaaagtctatatttataataaaagaatcc 17324004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21948426 - 21948526
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    |||||||||||| | |||||||| | |||||||||||||||    
T  21948426 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttatagtaa 21948525  T
Q  97 a 97  Q
    |    
T  21948526 a 21948526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39932115 - 39932017
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||||||||  ||| |||||| | ||||||||||||||||    
T  39932115 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctcaaagttttgtctcatacaaggtctatatttatagtaaa 39932017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6995939 - 6996037
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||  ||||||||||| ||| | ||||||||||| ||||||    
T  6995939 atacaaaccctagttttgttgttgcctttctaaaccgttgtttcggccccctctatctcaagatttactctgattcaaggtctatatttataataaaag 6996037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 51752407 - 51752309
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||| ||||| ||||||||||  |||||||||| ||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  51752407 atacaagccctaattttgttgttacctttctaaactcttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaag 51752309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9459656 - 9459760
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||      ||||| ||||||||||||  ||||||||| | |||||||||||||    
T  9459656 atacaaaccctagttttgttgttgactttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagt 9459755  T
Q  95 aaaag 99  Q
    |||||    
T  9459756 aaaag 9459760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9463483 - 9463587
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||      ||||| ||||||||||||  ||||||||| | |||||||||||||    
T  9463483 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagt 9463582  T
Q  95 aaaag 99  Q
    |||||    
T  9463583 aaaag 9463587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28840722 - 28840622
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||| || ||  ||||||||||| ||||||||||| | |||||||||||||||||    
T  28840722 atacaaaccctagttttgttgtttcctttctaaacccttgtttcatccccctgtatctctcaaagtttgctctgatacaaggtctatatttatagtaaaa 28840623  T
Q  99 g 99  Q
    |    
T  28840622 g 28840622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31735760 - 31735862
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatc----tcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||    ||||||||||  ||||||||| | |||||||||||||||    
T  31735760 atacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctcattcaaagtttagcctgatacaaggtctatatttatagtaa 31735859  T
Q  97 aag 99  Q
    |||    
T  31735860 aag 31735862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47177404 - 47177302
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||    ||||||||||| || |||||||| | |||||||||||||||    
T  47177404 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaa 47177305  T
Q  97 aag 99  Q
    |||    
T  47177304 aag 47177302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47179755 - 47179653
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||    ||||||||||| || |||||||| | |||||||||||||||    
T  47179755 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaa 47179656  T
Q  97 aag 99  Q
    |||    
T  47179655 aag 47179653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2949470 - 2949568
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||| ||| ||| |||   |||||||||| |||||||    
T  2949470 atacaaactctagttttgttgttgtcattctaaacccttgtttcagccccctctatctcaaggttttctcggattcaatatctatatttattgtaaaag 2949568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6756569 - 6756471
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| || |||||| |||| |||||| | ||||||| | |||||||||||| |||||    
T  6756569 atacaaaccctagttttgttgttgcctttctaagcccttgtttcagtcccctctatttcaaggtttacaccgatacaatgtctatatttatagcaaaag 6756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14098209 - 14098307
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||||| |||| |||| |||||| ||||||||| || ||||||||||||||||| | |||||||| | ||||||||||||| ||||    
T  14098209 atacaaaccctagttttgtagttgcctttttaaaccattgtttcagtcccctctatctcaaagtttagtttgatacaaggtctatatttatagtgaaag 14098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15295073 - 15295131
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15295073 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccctctctatctc 15295131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31425258 - 31425336
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaa 79  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| ||||||  |||||||||    
T  31425258 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctttatctcaaggtttacattgatacaaa 31425336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2510563 - 2510665
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||| |||||    ||||||||||||  ||||||||| | |||||||||||||||    
T  2510563 atacaaaccctagttttgtggttgcctttataaacccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaa 2510662  T
Q  97 aag 99  Q
    |||    
T  2510663 aag 2510665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3579855 - 3579955
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcag--ccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||  ||| |||||||||||| ||||| ||||||||| | ||||||||| |||||||    
T  3579855 atacaaaccctagttttgttgctgcctttctgaacccttgtttcagccccccctctatctcaaattttacgctgatacaaggtctatatttaaagtaaaa 3579954  T
Q  99 g 99  Q
    |    
T  3579955 g 3579955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 8347509 - 8347662
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||| ||| ||||||||||| |||||| |||||||||| | |||| |||||||||||||    
T  8347509 atacaaaccctagttttcttgttgactt-ctaaacccttgtttcaaccccctctatctcaaggtttacatctgatacaaggtctat-tttatagtaaaag 8347606  T
Q  100 aatccctcat-agattggaacaaaatcaggccc--aaaaatacgttctatttttatg 153  Q
     | ||||||| | |||||||| ||||| | |||  ||||||||||| ||||||||||    
T  8347607 tacccctcataaaattggaac-aaatctgacccataaaaatacgttttatttttatg 8347662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 27337181 - 27337279
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||||  || |||||| | ||||||||||||||||||    
T  27337181 aaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaaaag 27337279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 12302950 - 12303029
Alignment:
Q  217 aattctgctccaaaaaatcgtgcttcgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||| | ||||||||||| || |||||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  12302950 aattctgctctagaaaatcgtgctccgcttttgacaactttagcaaacttcaatttctccaattttgaatcactttcaca 12303029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18800809 - 18800911
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||| ||||||| |||||| ||| ||||||| ||||||||||||  | |||||||| |||||||||||||||| | ||||||||||||||||||     
T  18800809 atacaaaccgtagttttcttgttgactt-ctaaacctttgtttcagccccttgtatctcaaggtttactctgatacaaggtctatatttatagtaaaagt 18800907  T
Q  101 atcc 104  Q
    ||||    
T  18800908 atcc 18800911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24325705 - 24325600
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagcc--------ctctctatctcaaagtttactctgatacaaagcctatatttata 92  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||        |||||| ||||||||||| ||||||||||| | |||||||||||    
T  24325705 atacaaaccctagttttgttgttgcctttct-aacccttgtttcagccccctctatctctctctctcaaagtttgctctgatacaaggtctatatttata 24325607  T
Q  93 gtaaaag 99  Q
    |||||||    
T  24325606 gtaaaag 24325600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 27339369 - 27339471
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||    ||||||||||||  || |||||| | |||||||||||||||    
T  27339369 atacaaaccctagttttattgttgcctttctaagcccttgtttcagccccctctatctctctcaaagtttagcctaatacaaggtctatatttatagtaa 27339468  T
Q  97 aag 99  Q
    |||    
T  27339469 aag 27339471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47906312 - 47906208
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc------tctctatctcaaagtttactctgatacaaagcctatatttatagt 94  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||||||      ||||| ||||||||||||  ||||||||| | |||||||||||||    
T  47906312 atacaaaccatagttttgttgttgccattctaaacccttgtttcagccccctctatctctctctcaaagtttagcctgatacaaggtctatatttatagt 47906213  T
Q  95 aaaag 99  Q
    |||||    
T  47906212 aaaag 47906208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17324875 - 17324973
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||| ||||||||||||| | |||||||||||||||| ||||| || |||||  | |||||||||| | ||| | ||||||||||||||||||    
T  17324875 atacaaaccccagttttgttgttgccattctaaacccttgttttagccccctgtatcttcaggtttactctggttcaaggtctatatttatagtaaaag 17324973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25127914 - 25127856
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  25127914 atacaaaccctagttttgttgttgcctttctaaacccttgtttcaggcccctctatctc 25127856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 48665215 - 48665115
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttca------gccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||| ||||||||||||||||||||       ||| |||||||| || |||||||||||| ||| | |||||||||||||||||    
T  48665215 aaaccctagttttgttgttgcctttctaaacccttgtttcaaccccctccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaa 48665116  T
Q  99 g 99  Q
    |    
T  48665115 g 48665115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 16431093 - 16431021
Alignment:
Q  51 ctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatccctcat-agattggaacaaa 122  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||||||| ||||||||| | |||||||||||    
T  16431093 ctctatctcaaggtttgctctgatacaaaacctatatttatagtaaaagtatccctcataaaattggaacaaa 16431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4131618 - 4131692
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctga 73  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||| |||||  |||||| |||||||||||    
T  4131618 atacaaaccctagttttgttgttgccattctaaatccttgtttcagccccctctatctctcaaggtttactctga 4131692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 8349288 - 8349410
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||| || |||| |||||| ||| |||||||||||||||||||||||||||||||| |||| | ||| ||||||   ||||||||||| |||||     
T  8349288 atacaaaccttaattttcttgttgactt-ctaaacccttgtttcagccctctctatctcaaggtttgcatctaatacaagatctatatttataataaaat 8349386  T
Q  100 aatccctcat-agattggaacaaa 122  Q
     ||||||||| | |||||||||||    
T  8349387 tatccctcataaaattggaacaaa 8349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 26520360 - 26520449
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgttt-cagccctc-tctatctcaaagtttactctgatacaaagcctatatttatag 93  Q
    ||||||||||||| |||||| ||| ||||||| |||||| |||||| | |||||||||| |||||||||||||||||| ||||||||||||    
T  26520360 aaaccctagttttcttgttgactt-ctaaaccgttgttttcagcccccctctatctcaaggtttactctgatacaaagtctatatttatag 26520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 26613503 - 26613600
Alignment:
Q  28 ttctaaacccttgttt-cagccctctctatctc--aaagtttactctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaa 122  Q
    |||||||||||||||| |||||| |||||||||  || ||||  |||||||||| | |||||||||||| |||||||||||||| | |||||||||||    
T  26613503 ttctaaacccttgttttcagccccctctatctctcaaggtttcatctgatacaaggtctatatttatagcaaaagaatccctcaaaaattggaacaaa 26613600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 50079326 - 50079380
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  50079326 cgattttgacagcttcagcaaacttcaatttcttcaatttggagtcactttcaca 50079380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 30790658 - 30790731
Alignment:
Q  27 tttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||| ||||||| |||| | ||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  30790658 tttctaaactcttgttttcagctccctctatctcaaggtttactctgatacaatgtctatatttatagtaaaag 30790731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46431946 - 46431994
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccc 49  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  46431946 atacaaaccctacttttgttgttgcctttctaaacccttgtttcagccc 46431994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 16432445 - 16432399
Alignment:
Q  3 acaaaccctagttttgttgttgtctttctaaacccttgtttcagccc 49  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  16432445 acaaaccctagttttgttgttgcctttctaaacccttgtttctgccc 16432399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 26979832 - 26979905
Alignment:
Q  69 tctgatacaaagcctatatttatagtaaaagaatccctcatagattggaacaaaatcaggcccaaaaatacgtt 142  Q
    |||||||||| | || |||||||| |||||| |||||| | | ||||||||||||||| |||||||||||||||    
T  26979832 tctgatacaaggtctttatttataataaaagcatccctaaaaaattggaacaaaatcaagcccaaaaatacgtt 26979905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 17318659 - 17318615
Alignment:
Q  252 agcttaagcaaacttcaatttctccaattttgagtcactttcaca 296  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  17318659 agcttcagcaaacttcaatttctccgattttgagtcactttcaca 17318615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 30738869 - 30738982
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgttt-cagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaagaatc 103  Q
    |||||||||||| ||| || | ||||||||||||||||| ||| |  || |||||||| ||||  |||||||||| | |||| ||||||||||||||||     
T  30738869 aaaccctagttt-gtttttttgtttctaaacccttgttttcagtcacctgtatctcaaggtttcatctgatacaaggactatgtttatagtaaaagaatg 30738967  T
Q  104 cctcatagattggaa 118  Q
    ||||| | |||||||    
T  30738968 cctcaaaaattggaa 30738982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 43104139 - 43104094
Alignment:
Q  63 gtttactctgatacaaagcctatatttatagtaaaagaatccctca 108  Q
    |||||||||||||||| | |||||||||||||||||| ||||||||    
T  43104139 gtttactctgatacaaggtctatatttatagtaaaagtatccctca 43104094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 4144997 - 4145069
Alignment:
Q  69 tctgatacaaagcctatatttatagta-aaagaatccctcatagattggaacaaaatcaggcccaaaaatacg 140  Q
    |||||||||| |  ||||||||||||  |||| |||||||||| |  ||||||||||||||||||||||||||    
T  4144997 tctgatacaaggtttatatttatagtggaaagcatccctcataaaaaggaacaaaatcaggcccaaaaatacg 4145069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 6115344 - 6115384
Alignment:
Q  27 tttctaaacccttgtttcagccctctctatctcaaagttta 67  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  6115344 tttctaaacccttgtttcagccccctctatctcaaggttta 6115384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 27916540 - 27916418
Alignment:
Q  2 tacaaaccctagttttgttgttgtctttctaaacccttgtttca--gccctctctatctcaaagtttac-tctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||| ||| || ||| ||||||||||||||    || |||| | ||||| ||||||| | |||||||| | |||||||||||||||||    
T  27916540 tacaaaccctagttttcttgctggctt-ctaaacccttgttttctggctctctgtttctcacagtttacatttgatacaatgtctatatttatagtaaaa 27916442  T
Q  99 gaatccctcatagattggaacaaa 122  Q
    | |||||||  | |||||||||||    
T  27916441 gtatccctccaaaattggaacaaa 27916418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 296
Target Start/End: Original strand, 14184109 - 14184144
Alignment:
Q  261 aaacttcaatttctccaattttgagtcactttcaca 296  Q
    |||||||||||||||||||||| |||||||||||||    
T  14184109 aaacttcaatttctccaattttaagtcactttcaca 14184144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 13125699 - 13125772
Alignment:
Q  4 caaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaa 78  Q
    |||||||||||||  |||||| ||| || ||||||||||||||||| || | ||||||  |||||||||||||||    
T  13125699 caaaccctagtttccttgttggctt-cttaacccttgtttcagccccctttctctcaagttttactctgatacaa 13125772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 46432015 - 46432065
Alignment:
Q  49 ctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||| ||||||||||||  ||||||||| | ||||||||||||||||||    
T  46432015 ctctctctctcaaagtttagcctgatacaaggtctatatttatagtaaaag 46432065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 15295142 - 15295183
Alignment:
Q  56 tctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    ||||||||||| ||||||||||| | ||||||||||||||||    
T  15295142 tctcaaagtttgctctgatacaaggtctatatttatagtaaa 15295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 13127873 - 13127959
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatag 93  Q
    |||||||| |||| |||||| ||| |||||||||||||||| ||| |||| ||| || |||||||| ||||||| |  |||||||||||    
T  13127873 aaaccctacttttcttgttggctt-ctaaacccttgtttcaaccc-ctctctctaaaggtttactccgatacaaggtttatatttatag 13127959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 17352832 - 17352800
Alignment:
Q  264 cttcaatttctccaattttgagtcactttcaca 296  Q
    ||||||||||| |||||||||||||||||||||    
T  17352832 cttcaatttcttcaattttgagtcactttcaca 17352800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 31425480 - 31425532
Alignment:
Q  242 cgattttgacagcttaagcaaacttcaatttctccaattttgagtcactttca 294  Q
    |||||||||||| |||   |||| ||||||||||||| |||||||||||||||    
T  31425480 cgattttgacagattacagaaacctcaatttctccaaatttgagtcactttca 31425532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 85281 - 85130
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||||  | || |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  85281 atacaaaccctagttttgttgttgtctttttaaatccttgtttctcctct-tctatctcaaggtttactttgatacaaagcctatatttatagtaaaaga 85183  T
Q  101 atccctcatagattggaacaaaatcaggcccaaaaatacgttctatttttatga 154  Q
    |||||||||| ||||||||||||||| | | ||||||| ||| |||||||||||    
T  85182 atccctcataaattggaacaaaatca-gacaaaaaatatgttttatttttatga 85130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 85100 - 85045
Alignment:
Q  204 gaatgtaagtgccaattctgctccaaaaaatcgtg-cttcgattttgacagcttaa 258  Q
    ||||| ||||| ||||||||||||||||||||||| || |||||||||||| ||||    
T  85100 gaatgaaagtgtcaattctgctccaaaaaatcgtgcctccgattttgacagtttaa 85045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 4048 - 3950
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  4048 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaag 3950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2931 - 2833
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||   ||||||||||||||||||    
T  2931 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctcaaagtttgctctgatacaagttctatatttatagtaaaag 2833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1068 - 1166
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  1068 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41720 - 41818
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||||||||| ||||    
T  41720 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaag 41818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6250 - 6152
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||||||| || |||||||| | ||||||||||||||||||    
T  6250 atacaaaccctagttttattgttgcttttctaaacccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 15066 - 14972
Alignment:
Q  5 aaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||| ||||||||| | |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  15066 aaaccctagttttgttgttgcctttctaaatcattgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaag 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14619 - 14677
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||    
T  14619 atacaaaccctagttttgttgttgtctttctaaaccattgtttcatccccctctatctc 14677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 183877 - 183974
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  183877 atacaaactctagttttgttgttgcctttctaaacctttgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttatagtgaaag 183974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 52062 - 51962
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta--tctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||  |||||||||||| | |||||||| | |||||||||||||||||    
T  52062 atacaaaccctagttttgttgttgccattctaaacccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaa 51963  T
Q  99 g 99  Q
    |    
T  51962 g 51962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 79236 - 79140
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaa 97  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||  ||||||||||| ||| | ||||||||||||||||    
T  79236 atacaaaccctagttttgttgttgcctttctaaacccttgttttagccccctctatctcaagttttactctgattcaaggtctatatttatagtaaa 79140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 16056 - 16177
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    ||||||||||||||||| |||||| ||| |||||||||| ||||| ||| |||||||| || |||||||||||||||||  ||||||||||||||||||     
T  16056 atacaaaccctagttttcttgttgactt-ctaaacccttatttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagt 16154  T
Q  101 atccctcataga-ttggaacaaa 122  Q
    |||||||||| | ||||||||||    
T  16155 atccctcataaatttggaacaaa 16177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11710 - 11808
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaag 99  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||| ||||||||| | |||||||||||| ||| | ||||||||||||||||||    
T  11710 atacaaaccctagttttgttgttgtcattctaaatccctgtttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaag 11808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 69528 - 69630
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    ||||||||||| |||||||| || | |||||||||| ||||    
T  69528 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttgctctgatataaggtctatatttattgtaa 69627  T
Q  97 aag 99  Q
    |||    
T  69628 aag 69630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 73260 - 73362
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctcta----tctcaaagtttactctgatacaaagcctatatttatagtaa 96  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    ||||||||||| || |||||||  | |||||||||||||||    
T  73260 atacaaaccctagatttgttgttgcctttctaaacccttgtttcagccccctctatctctctcaaagtttcctttgatacacggtctatatttatagtaa 73359  T
Q  97 aag 99  Q
    |||    
T  73360 aag 73362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35690 - 35588
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaaga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | ||||||| |   ||||   ||||||||| | |||||||||||||||||||    
T  35690 atacaaaccctagttttgttgttgcctttctaaacccttgtttcagcgc-ctctatcacccggtttgtactgatacaatgtctatatttatagtaaaaga 35592  T
Q  101 atcc 104  Q
    ||||    
T  35591 atcc 35588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 92 - 34
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  92 atacaaaccctagttttgttgttgcttttctaaacccttgtttcagccccctctatctc 34  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29222 - 29164
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctc 59  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  29222 atacaaaccctagttttgttgttgcctttttaaacccttgtttcagccccctctatctc 29164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16885 - 16981
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttg-tttcagccctctctatctcaaagtttactctgatacaaagcctatatttatagtaaaa 98  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||||||  ||||||||||| |||||||||||||||| |  |||||||||| |||||    
T  16885 atacaaaccctagttttgt-gttgtctttc-aaacccttgttttcagcctcctctatctcaaggtttactctgatacaaggtttatatttatattaaaa 16981  T

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Target: scaffold0511 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 2092 - 2036
Alignment:
Q  2 tacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatct 58  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  2092 tacaaaccctagttttgttgttgcctttctaaacccttgtttcagccccctatatct 2036  T

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Target: scaffold0468 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1869 - 1958
Alignment:
Q  1 atacaaaccctagttttgttgttgtctttctaaacccttgtttcagccctctctatctcaaagtttac-tctgatacaaagcctatattta 90  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||  ||||||||| | |||||| |||||||||| | |||||||||    
T  1869 atacaaaccctagttttcttgttgactt-ctaaacccttgtttcagccacctctatctctaggtttacatctgatacaaggtctatattta 1958  T

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Target: scaffold0133 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 4825 - 4773
Alignment:
Q  41 tttcagccctctctatctcaaagtttactctgatacaaagcctatatttatag 93  Q
    |||||| || ||||||||||| |||||||||||||||| | ||||||||||||    
T  4825 tttcagacccctctatctcaaggtttactctgatacaaggtctatatttatag 4773  T

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