View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9712_low_17 (Length: 274)
Name: NF9712_low_17
Description: NF9712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9712_low_17 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 24 - 264
Target Start/End: Complemental strand, 12327699 - 12327459
Alignment:
| Q |
24 |
agcctagccctttatttttctaactcctagaaaaaccaatcccaacctagccatctacacaactgatcgggaatagccttacgctttaaaagattttgac |
123 |
Q |
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| T |
12327699 |
agcctagccctttatttttctaactcctagaaaaaccaatcccaacctagccatctacacaactgatcgggaatagccttatgctttaaaagattttgac |
12327600 |
T |
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| Q |
124 |
gcgtagggaccccgtcaagtagtaactgcactttcgaggaggcccatctacgcctaaccaatttcaaggatttcaaaacatcgaccaatccagcctccca |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12327599 |
gcgtagggaccccgtcaagtagtaactgcactttcgagggggcccatctacgcctaaccaatttcaaggatttcaaaacatcgaccaatccagcctccca |
12327500 |
T |
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| Q |
224 |
gggccgcataggccaaatggacagaatacttcctgtctgtg |
264 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
12327499 |
gggccgcataggccaaatggacagaatacttcctgtctgtg |
12327459 |
T |
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