View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9718_low_19 (Length: 252)

Name: NF9718_low_19
Description: NF9718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9718_low_19
NF9718_low_19
[»] chr6 (34 HSPs)
chr6 (1-125)||(26622805-26622929)
chr6 (1-125)||(26728783-26728907)
chr6 (1-118)||(27677848-27677965)
chr6 (1-118)||(27593254-27593371)
chr6 (1-123)||(27678777-27678899)
chr6 (1-127)||(31284115-31284241)
chr6 (1-116)||(26861454-26861569)
chr6 (1-123)||(27706636-27706758)
chr6 (1-94)||(26884023-26884116)
chr6 (1-116)||(28786116-28786231)
chr6 (1-116)||(28792237-28792352)
chr6 (1-127)||(27338299-27338425)
chr6 (1-127)||(27399039-27399165)
chr6 (1-127)||(27611236-27611362)
chr6 (1-127)||(27718613-27718739)
chr6 (1-127)||(27725079-27725205)
chr6 (1-127)||(28780966-28781092)
chr6 (1-127)||(26655816-26655942)
chr6 (1-127)||(26761787-26761913)
chr6 (1-127)||(27229059-27229185)
chr6 (1-127)||(27698728-27698854)
chr6 (1-118)||(26802278-26802395)
chr6 (186-235)||(27338504-27338553)
chr6 (186-235)||(27399244-27399293)
chr6 (1-99)||(26646334-26646432)
chr6 (1-99)||(26752302-26752400)
chr6 (1-98)||(27604939-27605036)
chr6 (136-188)||(27605094-27605146)
chr6 (1-44)||(28139451-28139494)
chr6 (1-48)||(28242710-28242757)
chr6 (1-48)||(28325387-28325434)
chr6 (136-174)||(26802204-26802242)
chr6 (193-233)||(26655683-26655723)
chr6 (193-233)||(26761654-26761694)
[»] chr1 (3 HSPs)
chr1 (4-118)||(28164586-28164700)
chr1 (1-93)||(28127901-28127993)
chr1 (82-118)||(268659-268695)
[»] scaffold0277 (2 HSPs)
scaffold0277 (1-116)||(4905-5020)
scaffold0277 (1-127)||(13866-13992)
[»] chr4 (5 HSPs)
chr4 (1-128)||(18724306-18724433)
chr4 (2-118)||(18731726-18731842)
chr4 (1-127)||(18655698-18655824)
chr4 (1-127)||(18699621-18699747)
chr4 (1-118)||(18679788-18679905)
[»] scaffold0349 (3 HSPs)
scaffold0349 (1-127)||(3656-3782)
scaffold0349 (1-127)||(14589-14715)
scaffold0349 (28-127)||(8062-8161)
[»] chr8 (1 HSPs)
chr8 (1-118)||(29274004-29274121)
[»] scaffold1254 (2 HSPs)
scaffold1254 (1-127)||(151-277)
scaffold1254 (147-188)||(304-345)
[»] scaffold0419 (2 HSPs)
scaffold0419 (1-127)||(7352-7478)
scaffold0419 (147-188)||(7284-7325)
[»] scaffold0038 (2 HSPs)
scaffold0038 (1-48)||(42872-42919)
scaffold0038 (1-48)||(116702-116749)


Alignment Details
Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26622929 - 26622805
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| | ||||| |||||||||||||||  || ||||||||||||||||||||| |    
T  26622929 ttgtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaacttaggaacacttggtatttgaattgataggaaattgaagaggaagaggatg 26622830  T
Q  101 gtgattgcatagccatgatatttga 125  Q
    |||||||||||||||||||| ||||    
T  26622829 gtgattgcatagccatgataattga 26622805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26728907 - 26728783
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| | ||||| |||||||||||||||  || ||||||||||||||||||||| |    
T  26728907 ttgtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaacttaggaacacttggtatttgaattgataggaaattgaagaggaagaggatg 26728808  T
Q  101 gtgattgcatagccatgatatttga 125  Q
    |||||||||||||||||||| ||||    
T  26728807 gtgattgcatagccatgataattga 26728783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27677848 - 27677965
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |   || ||||||||||| |||||||||||    
T  27677848 ttgtagagattgccggtgaaaccgtaccgagtgtcacttcctctgaaattgaggaatacttggtatttgtactcataggaaattgaagtggaagaggaag 27677947  T
Q  101 gtgattgcatagccatga 118  Q
    ||||||||||||||||||    
T  27677948 gtgattgcatagccatga 27677965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27593254 - 27593371
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttg-aatctatgggaaattgaagaggaagaggaa 99  Q
    ||||||||||| || ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||| || ||||||||||| ||||||||||    
T  27593254 ttgtagagattgccggtgaaaccgtaccgagtgtcacttcctctgaaactgaggaatacttggtatttgtaatc-ataggaaattgaagtggaagaggaa 27593352  T
Q  100 ggtgattgcatagccatga 118  Q
    |||||||||||||||||||    
T  27593353 ggtgattgcatagccatga 27593371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 27678899 - 27678777
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |   || ||||||||||| |||||||||||    
T  27678899 ttgtagagattcccggtgaaaccgtaccgagtgtcacttcctctgaaactgaggaatacttggtatttgtactcataggaaattgaagtggaagaggaag 27678800  T
Q  101 gtgattgcatagccatgatattt 123  Q
    |||||||||||||||||| ||||    
T  27678799 gtgattgcatagccatgagattt 27678777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 31284241 - 31284115
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || |||||||| || |||||||||||||| || ||| | |||||||||||||||||||||  || |||||||||||||||||||||||    
T  31284241 ttgtagagattgccggtgaaaccataccgagtgtcacttcccctgaaactaaggaatacttggtatttgaatacataggaaattgaagaggaagaggaag 31284142  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
     ||||||||||||||||| ||||||||    
T  31284141 atgattgcatagccatgagatttgaga 31284115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26861569 - 26861454
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || ||||| || ||||||||||||||||| ||| |||||||||| ||||||||||||| || |||||| |||||||||||| |||    
T  26861569 ttgtagagattaccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacctggtatttgaatccataggaaatggaagaggaagagcaag 26861470  T
Q  101 gtgattgcatagccat 116  Q
    ||||||||||||||||    
T  26861469 gtgattgcatagccat 26861454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 27706636 - 27706758
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || ||||||||||| |||||||||| |||||| ||| |||||||||||||||||||| |   || ||||||||||| ||||||| |||    
T  27706636 ttgtagagattgcctgtgaaaccgtaccgagtgtcacctcctctgaaactgaggaatacttggtatttgtactcataggaaattgaagtggaagagaaag 27706735  T
Q  101 gtgattgcatagccatgatattt 123  Q
    |||||||||||||||||| ||||    
T  27706736 gtgattgcatagccatgagattt 27706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26884116 - 26884023
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaag 94  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||| ||||||| ||||||||  |||||| || ||||| |||||||||||    
T  26884116 ttgtagagatttccagtgaaaccataccgagtgtcacttcctctgaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggaag 26884023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28786231 - 28786116
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||| || |||||||  ||||||||| | || |||||| ||||||| ||||||||  |||||| || ||||| ||||||||| |||||||    
T  28786231 ttgtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaag 28786132  T
Q  101 gtgattgcatagccat 116  Q
    ||||||| ||||||||    
T  28786131 gtgattgtatagccat 28786116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28792352 - 28792237
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||| || |||||||  ||||||||| | || |||||| ||||||| ||||||||  |||||| || ||||| ||||||||| |||||||    
T  28792352 ttgtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaag 28792253  T
Q  101 gtgattgcatagccat 116  Q
    ||||||| ||||||||    
T  28792252 gtgattgtatagccat 28792237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27338299 - 27338425
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || ||||||||  |||||||| |  | |||||| ||||||| || ||||||||||| | |  ||||||||||||||||||||||     
T  27338299 ttgtagagattgccggtaaaaccgtaaagagtgtcaatgtccctaaaactgaggaacacatggtatttgaacccagaggaaattgaagaggaagaggaaa 27338398  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    |||||||||||||||||| | ||||||    
T  27338399 gtgattgcatagccatgagaattgaga 27338425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27399039 - 27399165
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || ||||||||  |||||||| |  | |||||| ||||||| || ||||||||||| | |  ||||||||||||||||||||||     
T  27399039 ttgtagagattgccggtaaaaccgtaaagagtgtcaatgtccctaaaactgaggaacacatggtatttgaacccagaggaaattgaagaggaagaggaaa 27399138  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    |||||||||||||||||| | ||||||    
T  27399139 gtgattgcatagccatgagaattgaga 27399165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27611236 - 27611362
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||| || |||||||  ||||||||| | || |||||| ||||||| ||||||||  |||||| || ||||| |||||| ||||||||||    
T  27611236 ttgtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaagaagaggaag 27611335  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
     | ||||||||||||||| | ||||||    
T  27611336 ctaattgcatagccatgaaaattgaga 27611362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27718613 - 27718739
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||| || |||| ||  ||||||||| | || |||||| ||||||| ||||||||  |||||| |||||| | ||||||||| |||||||    
T  27718613 ttgtagagatttccggtaaaactgtgccgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccatgggagaatgaagaggatgaggaag 27718712  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    ||||||| |||||||||| | ||||||    
T  27718713 gtgattgtatagccatgagaattgaga 27718739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27725079 - 27725205
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||| || |||||||  ||||||||| | || |||||| | ||||| ||||||||  |||||| || ||||| ||||||||| |||||||    
T  27725079 ttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaag 27725178  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    ||||||| |||||||||| | ||||||    
T  27725179 gtgattgtatagccatgacaattgaga 27725205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 28781092 - 28780966
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || |||||||  ||||||||| | || |||||| ||||||| ||||||||  |||||  |  ||||| |||||||||||||||||    
T  28781092 ttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatgcagaggaaaatgaagaggaagaggaag 28780993  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    || ||||||||||||||||| ||||||    
T  28780992 gtaattgcatagccatgataattgaga 28780966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26655942 - 26655816
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || |||||||  || |||||| | || |||||| ||||||| ||||||||||| || | || ||||| ||||||||| |||||||    
T  26655942 ttgtagagattgccggtaaaaccgtgccgggtgtcaatgcccctaaaactgaggaacacttggtatttaaacccataggaaaatgaagaggatgaggaag 26655843  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    ||||||| |||||||||| | ||||||    
T  26655842 gtgattgtatagccatgagaattgaga 26655816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26761913 - 26761787
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || |||||||  || |||||| | || |||||| ||||||| ||||||||||| || | || ||||| ||||||||| |||||||    
T  26761913 ttgtagagattgccggtaaaaccgtgccgggtgtcaatgcccctaaaactgaggaacacttggtatttaaacccataggaaaatgaagaggatgaggaag 26761814  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    ||||||| |||||||||| | ||||||    
T  26761813 gtgattgtatagccatgagaattgaga 26761787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 27229185 - 27229059
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || |||||||  ||||||||| | || |||||| | ||||| ||||||||  |||||| |  ||||| |||||||||||||||||    
T  27229185 ttgtagagattgccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatccaaaggaaaatgaagaggaagaggaag 27229086  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    ||||||| |||||||||| | ||||||    
T  27229085 gtgattgtatagccatgagacttgaga 27229059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27698728 - 27698854
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||| || |||||||  ||||||||| | || |||||| ||| ||| ||||||||  |||||| || ||||| ||||| ||| |||||||    
T  27698728 ttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactgatgaacacttggtaagtgaatccataggaaaatgaagtggatgaggaag 27698827  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    ||||||| |||||||||| | ||||||    
T  27698828 gtgattgtatagccatgagaattgaga 27698854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26802395 - 26802278
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || |||||||| ||||||||| | || |||||| ||||||| ||||||||  |||||| ||  |||| ||||||||| |||||||    
T  26802395 ttgtagagattgcccgtaaaaccgtaccgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataagaaaatgaagaggatgaggaag 26802296  T
Q  101 gtgattgcatagccatga 118  Q
    | || |||||||||||||    
T  26802295 gagactgcatagccatga 26802278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 27338504 - 27338553
Alignment:
Q  186 tctataaaacaaggtgaaaacttatgacaaaaatgatttgtgaaacttct 235  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||||    
T  27338504 tctatataacaaggagaaaacttgtgacaaaaatgatttgtgaaacttct 27338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 27399244 - 27399293
Alignment:
Q  186 tctataaaacaaggtgaaaacttatgacaaaaatgatttgtgaaacttct 235  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||||    
T  27399244 tctatataacaaggagaaaacttgtgacaaaaatgatttgtgaaacttct 27399293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26646432 - 26646334
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaa 99  Q
    |||||||||| |||||| |||||||  ||||||||||| || || || |||||||| || |||||  ||||||  | ||||||| ||||||||||||||    
T  26646432 ttgtagagatgtccagtaaaaccgtcacgagtgtcactgcccctgaagttgaggaagacctggtaggtgaatccgtaggaaattaaagaggaagaggaa 26646334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26752400 - 26752302
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaa 99  Q
    |||||||||| |||||| |||||||  ||||||||||| || || || |||||||| || |||||  ||||||  | ||||||| ||||||||||||||    
T  26752400 ttgtagagatgtccagtaaaaccgtcacgagtgtcactgcccctgaagttgaggaagacctggtaggtgaatccgtaggaaattaaagaggaagaggaa 26752302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 27604939 - 27605036
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagagga 98  Q
    ||||||||||| || || |||||||||||||||||| | || |||||| | ||||| ||||||||  |||||  || ||||| ||||||||| |||||    
T  27604939 ttgtagagattgccggtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaaatgaagaggatgagga 27605036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 27605094 - 27605146
Alignment:
Q  136 tgagaatgcacaatatgaatgagtaagtttttgcggtctttgttgtggagtct 188  Q
    |||||||||| |||||||||||||||||||||| ||||| || | ||||||||    
T  27605094 tgagaatgcagaatatgaatgagtaagtttttgtggtctgtgatttggagtct 27605146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28139494 - 28139451
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctct 44  Q
    |||||||||||||||||||||||| | ||||||||||| |||||    
T  28139494 ttgtagagatttccagtgaaaccgaaacgagtgtcactgcctct 28139451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28242757 - 28242710
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaa 48  Q
    ||||||||||||||||| ||||| || ||||||||||| |||||||||    
T  28242757 ttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaa 28242710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28325434 - 28325387
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaa 48  Q
    ||||||||||||||||| ||||| || ||||||||||| |||||||||    
T  28325434 ttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaa 28325387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 26802242 - 26802204
Alignment:
Q  136 tgagaatgcacaatatgaatgagtaagtttttgcggtct 174  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  26802242 tgagaatgcagaatatgaatgagtaagtttttgtggtct 26802204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 26655723 - 26655683
Alignment:
Q  193 aacaaggtgaaaacttatgacaaaaatgatttgtgaaactt 233  Q
    ||||||| |||||||||||| ||||||||| ||||||||||    
T  26655723 aacaaggagaaaacttatgaaaaaaatgatctgtgaaactt 26655683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 26761694 - 26761654
Alignment:
Q  193 aacaaggtgaaaacttatgacaaaaatgatttgtgaaactt 233  Q
    ||||||| |||||||||||| ||||||||| ||||||||||    
T  26761694 aacaaggagaaaacttatgaaaaaaatgatctgtgaaactt 26761654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 28164586 - 28164700
Alignment:
Q  4 tagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaaggtg 103  Q
    |||||||  |||||||||||||  ||||||||||| || |||||| ||||||| ||||||||| |||||| || |||||||||||||||||||||| | |    
T  28164586 tagagatggccagtgaaaccgtcacgagtgtcactgcccctaaaactgaggaacacttggtatgtgaatccataggaaattgaagaggaagaggaatgcg 28164685  T
Q  104 attgcatagccatga 118  Q
    || | ||||||||||    
T  28164686 atcgtatagccatga 28164700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28127901 - 28127993
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaa 93  Q
    ||||||||||  |||||||||||||  ||||||||||| || || ||  ||||||| ||||||||| |||||| || ||||||||||||||||    
T  28127901 ttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacacttggtatgtgaatccataggaaattgaagaggaa 28127993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 268659 - 268695
Alignment:
Q  82 attgaagaggaagaggaaggtgattgcatagccatga 118  Q
    |||||||||||||||||||||||||||||||||||||    
T  268659 attgaagaggaagaggaaggtgattgcatagccatga 268695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4905 - 5020
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||| || |||||||  ||||||||| | || |||||| ||||||| ||||||||  |||||| || ||||| ||||||||| |||||||    
T  4905 ttgtagagatttccggtaaaaccgtggcgagtgtcaatgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaag 5004  T
Q  101 gtgattgcatagccat 116  Q
    ||||||| ||||||||    
T  5005 gtgattgtatagccat 5020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13866 - 13992
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || |||||||  ||||||||| | || |||||| ||||||| ||||||||  |||||  |  ||||| |||||||||||||||||    
T  13866 ttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatgcagaggaaaatgaagaggaagaggaag 13965  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    || ||||||||||||||||| ||||||    
T  13966 gtaattgcatagccatgataattgaga 13992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 18724306 - 18724433
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||  ||||| |||||||  ||||||||||| || || ||  ||||||| ||||||||  |||||| || ||||| ||||||||| |||||||    
T  18724306 ttgtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaag 18724405  T
Q  101 gtgattgcatagccatgatatttgagaa 128  Q
    |||||||||||||||||| | |||||||    
T  18724406 gtgattgcatagccatgagaattgagaa 18724433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 18731726 - 18731842
Alignment:
Q  2 tgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaagg 101  Q
    |||||||||  ||||| |||||||  ||||||||||| || || ||  ||||||| ||||||||  |||||| || ||||| ||||||||| ||||||||    
T  18731726 tgtagagatggccagtaaaaccgtcacgagtgtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaagg 18731825  T
Q  102 tgattgcatagccatga 118  Q
    |||||||||||||||||    
T  18731826 tgattgcatagccatga 18731842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18655698 - 18655824
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||  ||||| |||||||  ||||||||||| || || ||  ||||||| ||||||||  |||||| || ||||| ||||||||| |||||||    
T  18655698 ttgtagagatgcccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaag 18655797  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    |||||||| ||||||||| | ||||||    
T  18655798 gtgattgcctagccatgaaaattgaga 18655824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18699621 - 18699747
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||  ||||| |||||||  ||||||||| | || || ||  ||||||| ||||||||  |||||| || ||||| ||||||||| |||||||    
T  18699621 ttgtagagatggccagtaaaaccgtcacgagtgtcagtgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaag 18699720  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    |||||||||||||||||| | ||||||    
T  18699721 gtgattgcatagccatgagaattgaga 18699747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18679788 - 18679905
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||  ||||| |||||||  ||||||||||| || || ||  ||||||| ||||||||  |||||| || ||||| ||||||| | |||||||    
T  18679788 ttgtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagagaatgaggaag 18679887  T
Q  101 gtgattgcatagccatga 118  Q
    ||||||||||||||||||    
T  18679888 gtgattgcatagccatga 18679905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 3656 - 3782
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||| || |||||||  ||||||||| | || |||||| | ||||| ||||||||  |||||| || ||||| ||||||||| |||||||    
T  3656 ttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaag 3755  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    ||||||| |||||||||| | ||||||    
T  3756 gtgattgtatagccatgacaattgaga 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 14589 - 14715
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    |||||||||||||| || |||||||  ||||||||| | || |||||| ||| ||| ||||||||  |||||| || ||||| ||||| ||| |||||||    
T  14589 ttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactgatgaacacttggtaagtgaatccataggaaaatgaagtggatgaggaag 14688  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    ||||||| |||||||||| | ||||||    
T  14689 gtgattgtatagccatgagaattgaga 14715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 8062 - 8161
Alignment:
Q  28 cgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaaggtgattgcatagccatgatatttgaga 127  Q
    ||||||||| | || |||||| ||||||| ||||||||  |||||| |||||| | ||||||||| |||||||||||||| |||||||||| | ||||||    
T  8062 cgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccatgggagaatgaagaggatgaggaaggtgattgtatagccatgagaattgaga 8161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29274004 - 29274121
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||  ||| | |||||||  ||||||||||  |||||||| |||||||| || |||||  |||||| ||  || |||||||||||||||||||    
T  29274004 ttgtagagatggccaataaaaccgtcacgagtgtcaccgcctctaaagttgaggaagacctggtaagtgaatccatatgagattgaagaggaagaggaag 29274103  T
Q  101 gtgattgcatagccatga 118  Q
    ||||||||||||||||||    
T  29274104 gtgattgcatagccatga 29274121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 151 - 277
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || |||||||  ||||||||| | || |||||| | ||||| ||||||||  |||||  ||  |||| |||||||||||||| ||    
T  151 ttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatatgaaaatgaagaggaagagggag 250  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    |||||||||||||||||| | ||||||    
T  251 gtgattgcatagccatgagaattgaga 277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 304 - 345
Alignment:
Q  147 aatatgaatgagtaagtttttgcggtctttgttgtggagtct 188  Q
    |||||||||||||||||||||| ||||| || ||||||||||    
T  304 aatatgaatgagtaagtttttgtggtctgtgatgtggagtct 345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7478 - 7352
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaattgaggaatacttggtatttgaatctatgggaaattgaagaggaagaggaag 100  Q
    ||||||||||| || || |||||||  ||||||||| | || |||||| | ||||| ||||||||  |||||  ||  |||| |||||||||||||| ||    
T  7478 ttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatatgaaaatgaagaggaagagggag 7379  T
Q  101 gtgattgcatagccatgatatttgaga 127  Q
    |||||||||||||||||| | ||||||    
T  7378 gtgattgcatagccatgagaattgaga 7352  T

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Target: scaffold0419; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 7325 - 7284
Alignment:
Q  147 aatatgaatgagtaagtttttgcggtctttgttgtggagtct 188  Q
    |||||||||||||||||||||| ||||| || ||||||||||    
T  7325 aatatgaatgagtaagtttttgtggtctgtgatgtggagtct 7284  T

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Target: scaffold0038 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42919 - 42872
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaa 48  Q
    ||||||||||||||||| ||||| || ||||||||||| |||||||||    
T  42919 ttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaa 42872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 116749 - 116702
Alignment:
Q  1 ttgtagagatttccagtgaaaccgtatcgagtgtcacttcctctaaaa 48  Q
    ||||||||||||||||| ||||| || ||||||||||| |||||||||    
T  116749 ttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaa 116702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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