View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9719_low_3 (Length: 578)

Name: NF9719_low_3
Description: NF9719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9719_low_3
NF9719_low_3
[»] chr3 (8 HSPs)
chr3 (14-559)||(7038250-7038796)
chr3 (92-270)||(39795240-39795418)
chr3 (92-261)||(32490848-32491017)
chr3 (159-234)||(831794-831869)
chr3 (92-197)||(20524861-20524966)
chr3 (400-440)||(7973631-7973671)
chr3 (400-440)||(10499070-10499110)
chr3 (400-440)||(51903839-51903879)
[»] chr4 (8 HSPs)
chr4 (76-223)||(36625521-36625668)
chr4 (93-236)||(33451293-33451436)
chr4 (92-266)||(19181414-19181588)
chr4 (92-199)||(44126011-44126118)
chr4 (88-266)||(45413767-45413945)
chr4 (90-206)||(26635260-26635376)
chr4 (90-197)||(2183304-2183411)
chr4 (148-266)||(42964503-42964621)
[»] chr2 (4 HSPs)
chr2 (32-262)||(6452408-6452637)
chr2 (99-261)||(40054471-40054633)
chr2 (104-271)||(6457533-6457700)
chr2 (103-197)||(7670386-7670480)
[»] chr7 (4 HSPs)
chr7 (94-235)||(39594606-39594747)
chr7 (90-261)||(41482419-41482590)
chr7 (88-178)||(24429718-24429808)
chr7 (103-235)||(23318950-23319082)
[»] chr8 (7 HSPs)
chr8 (164-271)||(12595848-12595955)
chr8 (92-261)||(22573080-22573249)
chr8 (88-261)||(31734261-31734434)
chr8 (92-178)||(556807-556895)
chr8 (92-176)||(9028635-9028719)
chr8 (167-234)||(3346410-3346477)
chr8 (400-440)||(11099842-11099882)
[»] chr5 (4 HSPs)
chr5 (92-260)||(34731215-34731383)
chr5 (159-260)||(16290786-16290887)
chr5 (160-234)||(7010701-7010775)
chr5 (404-440)||(9187494-9187530)
[»] chr1 (12 HSPs)
chr1 (88-235)||(9383224-9383371)
chr1 (88-266)||(26793697-26793875)
chr1 (92-186)||(4076347-4076441)
chr1 (93-186)||(19806758-19806851)
chr1 (132-261)||(12855276-12855405)
chr1 (230-271)||(44107845-44107886)
chr1 (149-197)||(20018619-20018667)
chr1 (140-228)||(28883928-28884016)
chr1 (88-178)||(6768290-6768380)
chr1 (136-233)||(30209719-30209816)
chr1 (154-186)||(7904167-7904199)
chr1 (154-186)||(8002742-8002774)
[»] chr6 (4 HSPs)
chr6 (163-260)||(12771941-12772038)
chr6 (92-186)||(8547436-8547530)
chr6 (92-186)||(8573789-8573883)
chr6 (400-440)||(12633084-12633124)


Alignment Details
Target: chr3 (Bit Score: 482; Significance: 0; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 14 - 559
Target Start/End: Complemental strand, 7038796 - 7038250
Alignment:
Q  14 gagagatgaaggaagagtctggattggaaatcgaaggagggtaaagaaaataacatgcatgctgatgataagcctatgctatcatgttgctaacccaaca 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038796 gagagatgaaggaagagtctggattggaaatcgaaggagggtaaagaaaataacatgcatgctgatgataagcctatgctatcatgttgctaacccaaca 7038697  T
Q  114 aaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgtaccaaataatggatttaaacag 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7038696 aaaagtaaggattagaattacaaaagatgaatacgataggattagtaataggtttaatttatcatatcctattagtgtaccaaataatggatttaaatag 7038597  T
Q  214 gataagataattttatcatatcaggtctctctatcatgcgcatcaaacagacctttaatgacatatgtcaaaacaatacaggaggcaaagttaaagaagt 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038596 gataagataattttatcatatcaggtctctctatcatgcgcatcaaacagacctttaatgacatatgtcaaaacaatacaggaggcaaagttaaagaagt 7038497  T
Q  314 taaggaagatttgaatagactgaaaataaaaggcgtatcattggggctctcagatgcggaggttttgatcaagagagatcttctcatctctccgatgtta 413  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038496 taaggaagatttgaatagaccgaaaataaaaggcgtatcattggggctctcagatgcggaggttttgatcaagagagatcttctcatctctccgatgtta 7038397  T
Q  414 atttgagtggactaatttagcttcttc-nnnnnnnnnnnnnnncttctcaattatttaagcttacgaatctaaactgcaatatccagtggcaaaaattga 512  Q
    |||||||||||||||||||||||||||                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7038396 atttgagtggactaatttagcttcttcaaaaaaaaaaaaaaatcttctcaattatttaagcttacgaatctaaactgcaatatccagtggcaaaaattga 7038297  T
Q  513 gagctagatggctgaaggatatggggatgcaaacactaagtactttc 559  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7038296 gagctagatggctgaaggatatggggatgcaaacactaagtactttc 7038250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 92 - 270
Target Start/End: Original strand, 39795240 - 39795418
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgt 191  Q
    ||||||||||||||||||   ||||| |||||||  ||||||||   |||||||| |||| |||| ||||| | ||||||||||||||| ||||| |||     
T  39795240 ctatcatgttgctaacccgttaaaaactaaggatgcgaattacatgggatgaataagatatgattagtaatcgatttaatttatcatattctattggtgc 39795339  T
Q  192 accaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaacagaccttta 270  Q
    |||||| ||   ||||||  |||||| |||| | ||||||||||| ||||||||||| |||||| |||||| |||||||    
T  39795340 accaaacaacatatttaagtaggatatgatagtgttatcatatcatgtctctctatcctgcgcaccaaacaaaccttta 39795418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 261
Target Start/End: Complemental strand, 32491017 - 32490848
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgt 191  Q
    |||||| |||||||||||| | |||| ||||||||| ||| ||||| |||  ||| ||||| ||| | |||||||||   ||||| | || |||| |||     
T  32491017 ctatcaggttgctaacccagctaaaactaaggattaaaataacaaaggattgataggatagaattagcaataggtttcgattatcctttcatattggtgc 32490918  T
Q  192 accaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaac 261  Q
    |||||| || ||||||||| || ||| |||| | ||||||||||  |||||| |||| |||||| |||||    
T  32490917 accaaacaaaggatttaaatagaatatgatagtgttatcatatcctgtctctttatcctgcgcaccaaac 32490848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 831869 - 831794
Alignment:
Q  159 taataggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatcatat 234  Q
    ||||||||||| |||||||| | || || ||| | |||| |||| ||||||||| |||||||||||||||||||||    
T  831869 taataggtttagtttatcattttctcttggtgcatcaaacaatgaatttaaacatgataagataattttatcatat 831794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 20524966 - 20524861
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgt 191  Q
    |||||| |||| ||||||| ||||||  |||||||| ||||||||| |||  ||| |||| ||||  |||| ||||||||||||| |||| |||| |||     
T  20524966 ctatcaagttgttaacccaccaaaaatcaaggattaaaattacaaaggatagataggatatgattactaatgggtttaatttatcgtatcatattggtgc 20524867  T
Q  192 accaaa 197  Q
    ||||||    
T  20524866 accaaa 20524861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 7973631 - 7973671
Alignment:
Q  400 tctctccgatgttaatttgagtggactaatttagcttcttc 440  Q
    |||||| ||||| |||||| |||||||||||||||||||||    
T  7973631 tctctctgatgtcaatttgggtggactaatttagcttcttc 7973671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 10499110 - 10499070
Alignment:
Q  400 tctctccgatgttaatttgagtggactaatttagcttcttc 440  Q
    |||||||||||| |||||| |||| ||||||||||||||||    
T  10499110 tctctccgatgtcaatttgggtgggctaatttagcttcttc 10499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 51903879 - 51903839
Alignment:
Q  400 tctctccgatgttaatttgagtggactaatttagcttcttc 440  Q
    |||||||| ||| ||||||||||| ||||||||||||||||    
T  51903879 tctctccggtgtcaatttgagtgggctaatttagcttcttc 51903839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 76 - 223
Target Start/End: Original strand, 36625521 - 36625668
Alignment:
Q  76 tgatgataagcctatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttat 175  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  36625521 tgatgataagtctatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaagggtgaataggataggattcgtaataggtttaatttat 36625620  T
Q  176 catatcctattagtgtaccaaataatggatttaaacaggataagataa 223  Q
    ||||||||||||||| |||||| ||   ||||||| |||||| |||||    
T  36625621 catatcctattagtgcaccaaacaacaaatttaaataggatatgataa 36625668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 93 - 236
Target Start/End: Complemental strand, 33451436 - 33451293
Alignment:
Q  93 tatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgta 192  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||||| |||||||| ||||| | | |||||||||||| ||||||||||| |||| ||| |    
T  33451436 tatcatgttgttaacccatcaaaaactaaggattataattacaaaggatgaataggatagaagtagtaataggtttattttatcatatcatattggtgca 33451337  T
Q  193 ccaaataatggatttaaacaggataagataattttatcatatca 236  Q
    ||||| || | ||||||  |||||| |||| |||||||||||||    
T  33451336 ccaaacaacgaatttaagtaggatacgatagttttatcatatca 33451293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 92 - 266
Target Start/End: Original strand, 19181414 - 19181588
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgt 191  Q
    ||||| ||||||||| ||| |||||| ||||||  | ||| | ||| ||||| || ||||||||| | |||||||||||||||||||||| | || |||     
T  19181414 ctatcttgttgctaatccaccaaaaactaaggacaaaaataataaaggatgagtaggataggattagaaataggtttaatttatcatatcatgttggtgc 19181513  T
Q  192 accaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaacagacc 266  Q
    |||||| ||| ||||  | ||||||| |||||||||||||||||| |||||||||||||| ||| ||||| ||||    
T  19181514 accaaacaatagattggatcaggataggataattttatcatatcatgtctctctatcatgtgcaccaaacggacc 19181588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 44126118 - 44126011
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgt 191  Q
    |||||| |||||||||||| ||||||  ||| |||||||  ||||||| |||||| ||||||||| | |||| |||||||||||||| |||||||  ||     
T  44126118 ctatcaagttgctaacccatcaaaaacaaagaattagaaaaacaaaaggtgaataggataggattagaaataagtttaatttatcatttcctattgctgc 44126019  T
Q  192 accaaata 199  Q
    ||||||||    
T  44126018 accaaata 44126011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 88 - 266
Target Start/End: Original strand, 45413767 - 45413945
Alignment:
Q  88 tatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctatta 187  Q
    |||||||||| |||||||||||| |||||| ||||||| | ||| ||||| | |  ||| |||||||| || ||||||||||||||||| | |||||||     
T  45413767 tatgctatcaggttgctaacccaccaaaaactaaggataaaaataacaaaggttagataggataggataggaaataggtttaatttatcctttcctattg 45413866  T
Q  188 gtgtaccaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaacagacc 266  Q
    ||| |||||| ||  |||| || || |||| |||| || |||| ||||  ||||| |||||| | ||| ||||| ||||    
T  45413867 gtgcaccaaacaaccgattgaatcaagatatgatagttctatcctatcctgtctccctatcaagtgcaccaaacggacc 45413945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 26635260 - 26635376
Alignment:
Q  90 tgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagt 189  Q
    |||||||| |||||||||||| |||||| ||||||| ||||| | ||| || || || ||||| ||||| |||||||| ||||||||||||| | || ||    
T  26635260 tgctatcaggttgctaacccaccaaaaactaaggataagaataataaaggaggagtaggatagaattggaaataggttaaatttatcatatcatgttggt 26635359  T
Q  190 gtaccaaataatggatt 206  Q
    | |||||| || |||||    
T  26635360 gcaccaaaaaacggatt 26635376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 2183411 - 2183304
Alignment:
Q  90 tgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagt 189  Q
    |||||||| |||||||||||| |||||| ||||||| | ||| ||||| | || ||| ||||||||||| |||  |||||||||||| | | ||||| ||    
T  2183411 tgctatcaggttgctaacccaccaaaaattaaggataaaaataacaaaggttggataggataggattggaaatgagtttaatttatccttttctattggt 2183312  T
Q  190 gtaccaaa 197  Q
    | ||||||    
T  2183311 gcaccaaa 2183304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 42964503 - 42964621
Alignment:
Q  148 gataggattggtaataggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatcatatcaggtctctctat 247  Q
    ||||||||  ||||| ||||||| ||||| | ||||||| ||| | ||||||  |||||| | ||||||| |||| ||||||||||||  ||||   |||    
T  42964503 gataggataagtaatgggtttaaattatcctttcctattggtgcaacaaataccggatttcagcaggataggatagttttatcatatcctgtctgcttat 42964602  T
Q  248 catgcgcatcaaacagacc 266  Q
    | |||||| ||||||||||    
T  42964603 cctgcgcaccaaacagacc 42964621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 32 - 262
Target Start/End: Complemental strand, 6452637 - 6452408
Alignment:
Q  32 ctggattggaaatcgaaggagggtaaagaaaataacatgcatg-ctgatgataagcctatgctatcatgttgctaacccaacaaaaagtaaggattagaa 130  Q
    ||||||||| |||||||||||| |||||||||||| |  |  | ||| || ||||| |||||||| | ||| ||||||||||||||| ||||||||||||    
T  6452637 ctggattgggaatcgaaggagg-taaagaaaataataatcgcgtctggtggtaagcatatgctataaggtttctaacccaacaaaaactaaggattagaa 6452539  T
Q  131 ttacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatc 230  Q
    |||||||   |||||| |||| |||| |||||||||||||||||||||||| |||| ||| | ||||  |||||||||||  ||||| ||||||||||||    
T  6452538 ttacaaagcgtgaataggataagattagtaataggtttaatttatcatatcttattggtgcatcaaaccatggatttaaattggataggataattttatc 6452439  T
Q  231 atatcaggtctctctatcatgcgcatcaaaca 262  Q
    |||||  ||||| |||||||||||| ||||||    
T  6452438 atatcctgtctc-ctatcatgcgcaccaaaca 6452408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 99 - 261
Target Start/End: Original strand, 40054471 - 40054633
Alignment:
Q  99 gttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgtaccaaat 198  Q
    |||||||||||| | |||| ||||||||| ||| ||||| |||  ||| |||||||||   |||||||||| |||||||| | ||||| ||| ||||||     
T  40054471 gttgctaacccagctaaaactaaggattaaaataacaaaggattgataggataggattaacaataggtttagtttatcattttctattggtgcaccaaac 40054570  T
Q  199 aatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaac 261  Q
    ||  |||||||| ||||||  ||| | ||||||||||| |||||  |||||||||||||||||    
T  40054571 aagagatttaaataggatataatagtgttatcatatcatgtctcgttatcatgcgcatcaaac 40054633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 271
Target Start/End: Complemental strand, 6457700 - 6457533
Alignment:
Q  104 taacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgtaccaaataatgg 203  Q
    ||||||| |||||| ||||||| | ||| ||||| | || ||| |||| |||||| ||| | ||||||||||||| | ||||| ||| |||||| ||  |    
T  6457700 taacccaccaaaaattaaggataaaaataacaaagggtggataagatatgattggaaattgatttaatttatcattttctattggtgcaccaaacaacag 6457601  T
Q  204 atttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaacagacctttaa 271  Q
    ||| || || |||| |||| || |||||||||  |||||||||||||| ||| |||||| ||| ||||    
T  6457600 attgaatcatgatatgatagttctatcatatcctgtctctctatcatgtgcaccaaacatacccttaa 6457533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 7670480 - 7670386
Alignment:
Q  103 ctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgtaccaaa 197  Q
    |||||||| |||||| ||||||| ||||||||||||| | |||| ||||||||| | || ||||| || ||||||| | ||||| ||| ||||||    
T  7670480 ctaacccaccaaaaattaaggataagaattacaaaagctcaataggataggattagaaacaggttaaacttatcattttctattggtgcaccaaa 7670386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 39594747 - 39594606
Alignment:
Q  94 atcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgtac 193  Q
    ||||||||||||||||| |||||| ||||||| | ||||||||| |||||||| |||| |||| ||||||||||||||||| |||||| |||| ||| ||    
T  39594747 atcatgttgctaacccatcaaaaactaaggataaaaattacaaaggatgaatatgataagattagtaataggtttaatttagcatatcttattggtgcac 39594648  T
Q  194 caaataatggatttaaacaggataagataattttatcatatc 235  Q
    |||| || ||||||||  |||||| |||| ||||||||||||    
T  39594647 caaacaacggatttaagtaggatatgatagttttatcatatc 39594606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 261
Target Start/End: Original strand, 41482419 - 41482590
Alignment:
Q  90 tgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagt 189  Q
    |||||||| |||||||||||| |||||| ||||||| | ||| ||||| | ||| || |||| ||||   ||||||||||| ||||| | |||| || ||    
T  41482419 tgctatcaggttgctaacccaccaaaaactaaggataaaaataacaaagggtgagtaggatatgattaaaaataggtttaagttatcctttcctgttggt 41482518  T
Q  190 gtaccaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaac 261  Q
    | |||||| |  | ||| || ||||| | |||| ||||||| ||||| ||||  |||||||| ||| |||||    
T  41482519 gcaccaaacagcgcattaaatcaggagatgatagttttatcctatcatgtcttcctatcatgtgcaccaaac 41482590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 24429808 - 24429718
Alignment:
Q  88 tatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcat 178  Q
    |||||||||| |||||||||||| |||||| ||||||| | ||| ||||| | ||| || |||||||||   ||||| ||||| |||||||    
T  24429808 tatgctatcaggttgctaacccaccaaaaactaaggataaaaataacaaagggtgagtaagataggattataaatagttttaaattatcat 24429718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 23318950 - 23319082
Alignment:
Q  103 ctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgtaccaaataatg 202  Q
    |||||||| ||||||  |||||| | ||||||||| | | |||| |||||||||   ||||||||||| ||||| | || | || ||| |||||| ||      
T  23318950 ctaacccatcaaaaaccaaggataaaaattacaaaggctcaataggataggattaaaaataggtttaaattatcctttcatgttggtggaccaaacaaca 23319049  T
Q  203 gatttaaacaggataagataattttatcatatc 235  Q
    ||||||| ||||||| |||| | ||||||||||    
T  23319050 gatttaatcaggatatgatagtgttatcatatc 23319082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 12595848 - 12595955
Alignment:
Q  164 ggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaacag 263  Q
    |||||| ||||||||||| ||||| || |||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||| |||||| ||||| |    
T  12595848 ggtttagtttatcatatcatattactgcaccaaacaaaagatttaaacaggataggataattttatcatatcatgtctctctatcttgcgcaccaaacgg 12595947  T
Q  264 acctttaa 271  Q
    ||||||||    
T  12595948 acctttaa 12595955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 261
Target Start/End: Complemental strand, 22573249 - 22573080
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgt 191  Q
    ||||||||||| ||||||| |||||| ||||||| ||||||||||| | | |||| ||||||||| | || ||||| || ||||||| |||| || |||     
T  22573249 ctatcatgttgttaacccaccaaaaactaaggataagaattacaaaggttcaataggataggattagaaacaggttaaacttatcatttcctgttggtgc 22573150  T
Q  192 accaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaac 261  Q
    |||||| || ||||| |  ||||||| |||| | | ||||||||| |||||  ||||||||||| |||||    
T  22573149 accaaacaacggattgagtcaggataggatattctaatcatatcatgtctccttatcatgcgcaccaaac 22573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 261
Target Start/End: Complemental strand, 31734434 - 31734261
Alignment:
Q  88 tatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctatta 187  Q
    |||| |||||||||| ||| ||| |||||| ||||||| | ||| ||||| | || ||  |||| |||||| ||||||||||||||||||| || ||||     
T  31734434 tatgttatcatgttgttaatccaccaaaaactaaggataaaaataacaaagggtggatgggataagattggaaataggtttaatttatcatttcttattg 31734335  T
Q  188 gtgtaccaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaac 261  Q
    ||| |||||| || ||||| || ||||||| || | |  |||||||||| |||||||||||||| ||| |||||    
T  31734334 gtgcaccaaacaacggattaaagcaggataggaaagtcctatcatatcatgtctctctatcatgtgcaccaaac 31734261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 556895 - 556807
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagt--aaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcat 178  Q
    ||||||||||||||||||| ||||||    |||||||||||  ||||| | |||||| |||| |||| | |||||||||||||||||||    
T  556895 ctatcatgttgctaacccaccaaaaaaacaaaggattagaaaaacaaagggtgaataggatatgattagaaataggtttaatttatcat 556807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 9028635 - 9028719
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatc 176  Q
    |||||| |||||||||||| ||||||  |||||| ||||||||||| | | |||| |||||||||   ||||||||||| |||||    
T  9028635 ctatcaggttgctaacccatcaaaaaccaaggataagaattacaaaggttcaataggataggattaaaaataggtttaaattatc 9028719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 3346477 - 3346410
Alignment:
Q  167 ttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatcatat 234  Q
    |||||||||| | | ||||||||| |||||| |||| ||||||  |||||| ||||||||||||||||    
T  3346477 ttaatttatctttttctattagtgcaccaaacaatgaatttaattaggataggataattttatcatat 3346410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 11099842 - 11099882
Alignment:
Q  400 tctctccgatgttaatttgagtggactaatttagcttcttc 440  Q
    |||||||||||| ||||||| ||||||||||||| ||||||    
T  11099842 tctctccgatgtcaatttgaatggactaatttagtttcttc 11099882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 4e-21; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 92 - 260
Target Start/End: Complemental strand, 34731383 - 34731215
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgt 191  Q
    |||||| |||||||||||| | |||| ||||||||| ||| ||||| |||  ||| |||||||||   |||||||||| |||||| | ||||||| |||     
T  34731383 ctatcaggttgctaacccagctaaaactaaggattaaaataacaaaggattgataggataggattaacaataggtttagtttatcctttcctattggtgc 34731284  T
Q  192 accaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaa 260  Q
    |||||| || ||||||||| |||||| |||| | ||||||||||   ||||| ||||||||||| ||||    
T  34731283 accaaacaagggatttaaataggatatgatagtgttatcatatcctatctctttatcatgcgcaccaaa 34731215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 16290786 - 16290887
Alignment:
Q  159 taataggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatca 258  Q
    ||||| ||||| |||||| | ||||||  | | |||||| || ||||||||||||||||||||||||||||||||||  |||||| |||| |||||| ||    
T  16290786 taatatgtttattttatcctttcctatgggagcaccaaacaaaggatttaaacaggataagataattttatcatatcctgtctctttatcctgcgcacca 16290885  T
Q  259 aa 260  Q
    ||    
T  16290886 aa 16290887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 7010701 - 7010775
Alignment:
Q  160 aataggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatcatat 234  Q
    |||||| ||| ||||||||||| |||||||| |||||||||  |||||||  |||||| ||||||||||||||||    
T  7010701 aataggattattttatcatatcttattagtgcaccaaataagagatttaagtaggatatgataattttatcatat 7010775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 9187494 - 9187530
Alignment:
Q  404 tccgatgttaatttgagtggactaatttagcttcttc 440  Q
    |||||||| ||||||||||||||||||||||||||||    
T  9187494 tccgatgtcaatttgagtggactaatttagcttcttc 9187530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 9383224 - 9383371
Alignment:
Q  88 tatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctatta 187  Q
    |||||||||| |||||||||||| |||||| ||||||| | ||| ||||| | ||| || |||| |||| | ||| |||||||||||||   |||||||     
T  9383224 tatgctatcaggttgctaacccatcaaaaattaaggatgaaaataacaaagggtgagtaggataagattagaaattggtttaatttatccgttcctattg 9383323  T
Q  188 gtgtaccaaataatggatttaaacaggataagataattttatcatatc 235  Q
    ||| |||||| ||||||||||| ||||||  |||| ||||||||||||    
T  9383324 gtgcaccaaacaatggatttaatcaggatgtgatagttttatcatatc 9383371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 266
Target Start/End: Complemental strand, 26793875 - 26793697
Alignment:
Q  88 tatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctatta 187  Q
    |||||||||| |||||||||||| |||||| |||| || | ||| ||||| | ||| || ||||||||| | |||| |||||| ||||| | | |||||     
T  26793875 tatgctatcaggttgctaacccaccaaaaactaagaataaaaataacaaaggttgattaggataggattagaaataagtttaagttatccttttctattg 26793776  T
Q  188 gtgtaccaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaacagacc 266  Q
    ||| |||||| || ||||| || ||||||| |||| || |||||||||| ||||   ||||||| ||| ||||||||||    
T  26793775 gtgcaccaaacaacggattgaatcaggatatgatagttctatcatatcatgtcttcttatcatgtgcaccaaacagacc 26793697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 4076347 - 4076441
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctatt 186  Q
    |||||| ||| |||| ||| |||||| ||||||||||||  |||||   |||||| ||||||||| ||||||||||||||||||| | |||||||    
T  4076347 ctatcaggttcctaatccaccaaaaactaaggattagaaaaacaaagagtgaataggataggattagtaataggtttaatttatcctttcctatt 4076441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 19806758 - 19806851
Alignment:
Q  93 tatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctatt 186  Q
    ||||| |||| ||||||| |||||| ||||||||||||  |||||   |||||| ||||||||| | ||||||||||||||||| | |||||||    
T  19806758 tatcaggttgttaacccaccaaaaactaaggattagaaaaacaaagagtgaataggataggattagaaataggtttaatttatcctttcctatt 19806851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 12855276 - 12855405
Alignment:
Q  132 tacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatca 231  Q
    |||||| |||||||| |||| |||  |||||||||||  | |||| | ||||||| ||| | |||| |||||||||||| |||||| ||||||  |||||    
T  12855276 tacaaaggatgaataggatatgataagtaataggtttggtgtatcctttcctattggtgcatcaaacaatggatttaaataggatatgataatgatatca 12855375  T
Q  232 tatcaggtctctctatcatgcgcatcaaac 261  Q
    ||||  |||||  ||||||| ||| |||||    
T  12855376 tatcctgtctccttatcatgtgcaccaaac 12855405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 44107886 - 44107845
Alignment:
Q  230 catatcaggtctctctatcatgcgcatcaaacagacctttaa 271  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  44107886 catatcatgtctctctatcatgtgcatcaaacagacctttaa 44107845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 20018667 - 20018619
Alignment:
Q  149 ataggattggtaataggtttaatttatcatatcctattagtgtaccaaa 197  Q
    |||||||| |||||||||||||||||||||||| | || ||||||||||    
T  20018667 ataggattagtaataggtttaatttatcatatcatgttggtgtaccaaa 20018619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 28883928 - 28884016
Alignment:
Q  140 atgaatacgataggattggtaataggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataatttta 228  Q
    ||||||| ||||||||| | || | |||||||||||| ||| ||||| ||| |||||| | |||||| || || |||||||||||||||    
T  28883928 atgaataagataggattaggaaaaagtttaatttatcctatactattggtgcaccaaacagtggattgaatcaagataagataatttta 28884016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 6768380 - 6768290
Alignment:
Q  88 tatgctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcat 178  Q
    |||||||||| ||| |||||||| |||||| ||||||| | ||| ||||| | || |||  ||||||| || |||| ||||||||||||||    
T  6768380 tatgctatcaggttcctaacccaccaaaaattaaggataaaaataacaaaggttggatagaataggataggaaataagtttaatttatcat 6768290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 30209816 - 30209719
Alignment:
Q  136 aaagatgaatacgataggattggtaataggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatcata 233  Q
    |||| |||||| ||||||||  |||||  | ||| |||||||| | ||||| |||||||||| ||  |||||||  |||||| |||||||||||||||    
T  30209816 aaaggtgaataggataggataagtaatgagattattttatcattttctattggtgtaccaaacaacagatttaagtaggatatgataattttatcata 30209719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 7904199 - 7904167
Alignment:
Q  154 attggtaataggtttaatttatcatatcctatt 186  Q
    |||| ||||||||||||||||||||||||||||    
T  7904199 attgataataggtttaatttatcatatcctatt 7904167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 186
Target Start/End: Original strand, 8002742 - 8002774
Alignment:
Q  154 attggtaataggtttaatttatcatatcctatt 186  Q
    |||| ||||||||||||||||||||||||||||    
T  8002742 attgataataggtttaatttatcatatcctatt 8002774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 12771941 - 12772038
Alignment:
Q  163 aggtttaatttatcatatcctattagtgtaccaaataatggatttaaacaggataagataattttatcatatcaggtctctctatcatgcgcatcaaa 260  Q
    |||||| |||| ||||||| ||||  || |||||| || ||||||||| | |||||||||   ||||||||||| |||||||||||||||||| ||||    
T  12771941 aggtttgatttctcatatcatattgctgcaccaaacaaaggatttaaatacgataagatagagttatcatatcatgtctctctatcatgcgcaccaaa 12772038  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 8547436 - 8547530
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctatt 186  Q
    ||||||||||||||||||| |||||| |||| || | ||| ||||| | |||||| |||| |||| | ||||||||||| ||||| | |||||||    
T  8547436 ctatcatgttgctaacccaccaaaaactaagtataaaaataacaaagggtgaatatgataagattagaaataggtttaagttatcctttcctatt 8547530  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 8573789 - 8573883
Alignment:
Q  92 ctatcatgttgctaacccaacaaaaagtaaggattagaattacaaaagatgaatacgataggattggtaataggtttaatttatcatatcctatt 186  Q
    ||||| ||||||||||||| |||||| |||| || | ||| ||||| | |||||| |||| |||| | ||||||||||| ||||||| |||||||    
T  8573789 ctatcttgttgctaacccaccaaaaactaagtataaaaataacaaagggtgaatatgataagattagaaataggtttaagttatcatttcctatt 8573883  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 12633084 - 12633124
Alignment:
Q  400 tctctccgatgttaatttgagtggactaatttagcttcttc 440  Q
    ||||||| |||| ||||| ||||||||||||||||||||||    
T  12633084 tctctccaatgtcaatttaagtggactaatttagcttcttc 12633124  T

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