View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9719_low_30 (Length: 255)
Name: NF9719_low_30
Description: NF9719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9719_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 2181215 - 2180979
Alignment:
| Q |
1 |
attaaactctattttgaaatggcataaggatgactaactttctctcgagatggctgaatagcatctgaagcgattcaactattagtattatacaaaactg |
100 |
Q |
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| T |
2181215 |
attaaactctattttgaaatggcataaggatgactaactttctctcgaggtggctgaatagcatctgaagcgattcaactattagtattatacaaaactg |
2181116 |
T |
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| Q |
101 |
atccatataaatgttgttgaattttcttttattattaaaaatcattaataagtcaaaataaaagaacatgaaaagtaaacttacaactgaaatgccacct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2181115 |
atccatataaatgttgttgaattttcttttattattaaaaatcattaataagtcaaaataaaagaacatgaaaagtaaacttacaactgaaatgccacct |
2181016 |
T |
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| Q |
201 |
gctattgcagcatttgcagcttccaatgccacttctg |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
2181015 |
gctattgcagcatttgcagcttccaatgccacttctg |
2180979 |
T |
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