View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9721_low_18 (Length: 218)

Name: NF9721_low_18
Description: NF9721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9721_low_18
NF9721_low_18
[»] chr1 (99 HSPs)
chr1 (5-216)||(47498858-47499069)
chr1 (105-180)||(5894278-5894353)
chr1 (109-178)||(33541837-33541906)
chr1 (109-180)||(37473269-37473340)
chr1 (118-180)||(27820468-27820530)
chr1 (125-179)||(51688576-51688630)
chr1 (111-180)||(41195325-41195394)
chr1 (53-185)||(9572178-9572303)
chr1 (108-185)||(14331654-14331731)
chr1 (129-180)||(24562452-24562503)
chr1 (110-179)||(3234153-3234222)
chr1 (122-179)||(6556889-6556946)
chr1 (53-172)||(9656534-9656650)
chr1 (107-180)||(22343958-22344031)
chr1 (105-178)||(27146363-27146436)
chr1 (120-180)||(473036-473096)
chr1 (120-180)||(17727235-17727295)
chr1 (120-180)||(33546590-33546650)
chr1 (105-161)||(38116300-38116356)
chr1 (120-180)||(41505557-41505617)
chr1 (109-180)||(1510438-1510509)
chr1 (109-180)||(14576782-14576853)
chr1 (111-178)||(30191863-30191930)
chr1 (109-180)||(38247324-38247394)
chr1 (109-175)||(42391241-42391307)
chr1 (55-100)||(1232964-1233009)
chr1 (111-180)||(1829075-1829144)
chr1 (111-180)||(5741532-5741601)
chr1 (53-93)||(4256112-4256152)
chr1 (129-180)||(10665960-10666014)
chr1 (109-157)||(24552469-24552517)
chr1 (104-180)||(45975570-45975646)
chr1 (52-180)||(10744187-10744309)
chr1 (134-177)||(17834292-17834335)
chr1 (126-177)||(29904633-29904684)
chr1 (124-179)||(30581683-30581738)
chr1 (140-179)||(38189656-38189695)
chr1 (141-180)||(45855731-45855770)
chr1 (125-179)||(8081769-8081823)
chr1 (53-95)||(15687143-15687185)
chr1 (124-158)||(27976372-27976406)
chr1 (53-95)||(28467377-28467419)
chr1 (53-95)||(29128368-29128410)
chr1 (32-89)||(33204434-33204494)
chr1 (53-95)||(37841956-37841998)
chr1 (53-95)||(38578485-38578527)
chr1 (53-91)||(39658550-39658588)
chr1 (130-180)||(43230894-43230944)
chr1 (141-179)||(46423151-46423189)
chr1 (142-180)||(51190727-51190765)
chr1 (134-179)||(488898-488943)
chr1 (111-180)||(5720851-5720920)
chr1 (55-96)||(36151577-36151618)
chr1 (53-93)||(38170762-38170803)
chr1 (10-90)||(49888730-49888813)
chr1 (126-177)||(24417817-24417869)
chr1 (145-177)||(27970428-27970460)
chr1 (55-95)||(30815707-30815747)
chr1 (110-166)||(31774167-31774223)
chr1 (105-176)||(37593784-37593856)
chr1 (128-179)||(48064189-48064241)
chr1 (149-180)||(3887760-3887791)
chr1 (113-180)||(5709432-5709499)
chr1 (106-177)||(7069183-7069254)
chr1 (5-90)||(15784299-15784380)
chr1 (104-143)||(15942250-15942289)
chr1 (124-179)||(17830025-17830080)
chr1 (126-173)||(23198364-23198411)
chr1 (141-180)||(34795565-34795604)
chr1 (53-100)||(36070203-36070250)
chr1 (56-95)||(52559901-52559940)
chr1 (109-179)||(1509623-1509693)
chr1 (134-179)||(4920894-4920940)
chr1 (55-93)||(11211078-11211116)
chr1 (134-180)||(17603525-17603571)
chr1 (53-95)||(34619448-34619490)
chr1 (141-179)||(37617563-37617601)
chr1 (148-178)||(39906524-39906554)
chr1 (134-180)||(49938618-49938664)
chr1 (148-181)||(836491-836524)
chr1 (105-173)||(9507115-9507184)
chr1 (126-174)||(10143278-10143327)
chr1 (123-176)||(15477443-15477496)
chr1 (56-93)||(27145808-27145845)
chr1 (104-161)||(49825090-49825147)
chr1 (109-161)||(11137793-11137845)
chr1 (109-156)||(14385892-14385937)
chr1 (110-166)||(25549101-25549157)
chr1 (55-91)||(27146320-27146356)
chr1 (53-93)||(27738250-27738290)
chr1 (147-179)||(27976264-27976296)
chr1 (53-93)||(29793742-29793782)
chr1 (53-93)||(31517810-31517850)
chr1 (109-157)||(33186169-33186217)
chr1 (120-180)||(34290119-34290179)
chr1 (142-178)||(46225699-46225735)
chr1 (68-100)||(46252767-46252799)
chr1 (55-91)||(51190823-51190859)
chr1 (53-93)||(52286638-52286678)
[»] chr8 (66 HSPs)
chr8 (56-180)||(26215376-26215493)
chr8 (5-70)||(33808289-33808354)
chr8 (109-179)||(14956424-14956494)
chr8 (105-157)||(40859833-40859885)
chr8 (109-180)||(1058203-1058274)
chr8 (105-179)||(2840239-2840314)
chr8 (105-179)||(2844926-2845001)
chr8 (105-184)||(5404493-5404572)
chr8 (126-180)||(29819026-29819080)
chr8 (124-185)||(40980995-40981056)
chr8 (120-180)||(36963485-36963545)
chr8 (105-180)||(37353363-37353439)
chr8 (105-179)||(2833445-2833520)
chr8 (105-180)||(34236042-34236117)
chr8 (56-178)||(41475133-41475248)
chr8 (53-161)||(37444485-37444586)
chr8 (109-176)||(9130439-9130506)
chr8 (105-176)||(9956927-9956998)
chr8 (110-173)||(40637423-40637486)
chr8 (126-187)||(900832-900894)
chr8 (109-179)||(38750229-38750299)
chr8 (111-164)||(15179038-15179091)
chr8 (109-169)||(41821440-41821498)
chr8 (53-101)||(42237492-42237540)
chr8 (131-185)||(4389818-4389873)
chr8 (126-173)||(21119072-21119119)
chr8 (121-180)||(35534750-35534809)
chr8 (120-166)||(41589577-41589623)
chr8 (134-179)||(1929948-1929993)
chr8 (109-180)||(12976086-12976154)
chr8 (128-173)||(15180418-15180463)
chr8 (122-178)||(31916462-31916519)
chr8 (109-158)||(38353242-38353291)
chr8 (63-173)||(28385187-28385301)
chr8 (53-96)||(34173172-34173216)
chr8 (105-156)||(10114394-10114445)
chr8 (106-169)||(10120648-10120711)
chr8 (126-173)||(10628220-10628267)
chr8 (145-180)||(18133556-18133591)
chr8 (148-179)||(27752433-27752464)
chr8 (105-179)||(29417818-29417892)
chr8 (142-181)||(38602238-38602277)
chr8 (53-91)||(3537101-3537139)
chr8 (57-95)||(4558756-4558794)
chr8 (111-177)||(8407293-8407359)
chr8 (53-95)||(11000631-11000673)
chr8 (142-176)||(18930602-18930636)
chr8 (134-180)||(29169030-29169076)
chr8 (122-180)||(31716361-31716419)
chr8 (134-179)||(44426531-44426577)
chr8 (147-180)||(22790510-22790543)
chr8 (53-94)||(24558812-24558853)
chr8 (109-178)||(29168181-29168250)
chr8 (132-185)||(31714356-31714409)
chr8 (62-95)||(40357857-40357890)
chr8 (106-166)||(1112969-1113029)
chr8 (55-95)||(7026689-7026729)
chr8 (147-179)||(12497403-12497435)
chr8 (107-179)||(25097295-25097367)
chr8 (143-179)||(25930702-25930738)
chr8 (52-88)||(29262943-29262979)
chr8 (53-89)||(35374443-35374479)
chr8 (136-179)||(38189195-38189239)
chr8 (113-177)||(38648214-38648278)
chr8 (134-178)||(43045852-43045896)
chr8 (105-172)||(43730664-43730732)
[»] chr5 (79 HSPs)
chr5 (9-185)||(9202771-9202943)
chr5 (5-168)||(39105356-39105515)
chr5 (105-185)||(28776850-28776930)
chr5 (109-180)||(3735620-3735691)
chr5 (105-176)||(19460501-19460572)
chr5 (53-169)||(12425462-12425571)
chr5 (113-179)||(32372495-32372561)
chr5 (109-179)||(24030531-24030601)
chr5 (127-180)||(7706126-7706179)
chr5 (124-181)||(40426631-40426688)
chr5 (105-177)||(1465134-1465206)
chr5 (105-185)||(32703563-32703643)
chr5 (105-180)||(42573894-42573970)
chr5 (108-170)||(7984868-7984930)
chr5 (114-180)||(16938001-16938067)
chr5 (109-178)||(7319140-7319209)
chr5 (109-157)||(42646548-42646596)
chr5 (105-179)||(5559610-5559685)
chr5 (105-179)||(10771993-10772068)
chr5 (105-175)||(39247984-39248055)
chr5 (125-179)||(12554334-12554388)
chr5 (126-180)||(31051768-31051822)
chr5 (126-179)||(3520302-3520355)
chr5 (131-180)||(12433521-12433570)
chr5 (120-185)||(42100194-42100259)
chr5 (105-179)||(6096427-6096498)
chr5 (120-179)||(8089679-8089739)
chr5 (125-181)||(13697904-13697960)
chr5 (105-177)||(34736641-34736713)
chr5 (52-173)||(465841-465955)
chr5 (128-163)||(3569097-3569132)
chr5 (109-180)||(32941341-32941411)
chr5 (53-91)||(8158371-8158409)
chr5 (109-179)||(26005367-26005437)
chr5 (105-179)||(40848638-40848712)
chr5 (105-159)||(42582813-42582867)
chr5 (53-176)||(2568534-2568658)
chr5 (65-180)||(6593179-6593288)
chr5 (105-185)||(30291135-30291216)
chr5 (124-169)||(34669871-34669916)
chr5 (127-180)||(39477831-39477884)
chr5 (125-173)||(10502553-10502601)
chr5 (111-179)||(10639825-10639892)
chr5 (52-100)||(11615461-11615509)
chr5 (60-100)||(11835230-11835270)
chr5 (105-180)||(14675015-14675091)
chr5 (105-180)||(20982250-20982325)
chr5 (136-180)||(32009578-32009622)
chr5 (59-95)||(40048356-40048392)
chr5 (56-95)||(12595813-12595852)
chr5 (125-180)||(25461900-25461955)
chr5 (56-95)||(30585502-30585541)
chr5 (141-180)||(42228031-42228070)
chr5 (141-180)||(42500370-42500409)
chr5 (53-95)||(7853616-7853658)
chr5 (65-95)||(19460080-19460110)
chr5 (109-179)||(25460963-25461033)
chr5 (53-95)||(29117000-29117042)
chr5 (126-180)||(29529810-29529864)
chr5 (53-95)||(32969187-32969229)
chr5 (53-95)||(35135732-35135774)
chr5 (109-179)||(40439084-40439153)
chr5 (66-95)||(4948617-4948646)
chr5 (55-96)||(8334535-8334576)
chr5 (62-95)||(10363708-10363741)
chr5 (108-177)||(27297955-27298024)
chr5 (124-180)||(34590362-34590419)
chr5 (113-178)||(34907918-34907983)
chr5 (50-95)||(37063141-37063186)
chr5 (139-180)||(37954583-37954624)
chr5 (57-94)||(38047929-38047966)
chr5 (105-161)||(1618991-1619047)
chr5 (53-89)||(3566388-3566424)
chr5 (124-180)||(24029938-24029994)
chr5 (105-178)||(26516180-26516253)
chr5 (109-177)||(36797205-36797273)
chr5 (105-180)||(38104979-38105054)
chr5 (136-179)||(40731174-40731218)
chr5 (55-95)||(42583107-42583147)
[»] chr2 (78 HSPs)
chr2 (111-180)||(39659639-39659708)
chr2 (109-180)||(41407171-41407242)
chr2 (105-179)||(2416194-2416268)
chr2 (112-185)||(36534663-36534736)
chr2 (125-180)||(1633691-1633746)
chr2 (105-180)||(40682488-40682563)
chr2 (123-180)||(15757809-15757866)
chr2 (118-179)||(43570297-43570358)
chr2 (127-179)||(38010283-38010335)
chr2 (105-180)||(26143756-26143830)
chr2 (130-180)||(4606861-4606911)
chr2 (109-180)||(41293360-41293433)
chr2 (109-174)||(32592463-32592528)
chr2 (109-177)||(41851408-41851476)
chr2 (110-173)||(5599180-5599243)
chr2 (105-180)||(19608740-19608815)
chr2 (126-177)||(26626759-26626810)
chr2 (130-180)||(41880642-41880693)
chr2 (109-180)||(42659280-42659351)
chr2 (106-152)||(2142561-2142607)
chr2 (110-172)||(3311922-3311984)
chr2 (124-178)||(12795664-12795718)
chr2 (134-180)||(41812228-41812274)
chr2 (124-177)||(27695731-27695784)
chr2 (68-178)||(39567784-39567888)
chr2 (13-180)||(8017314-8017477)
chr2 (53-163)||(36114316-36114419)
chr2 (139-179)||(40279082-40279122)
chr2 (143-179)||(40835435-40835471)
chr2 (105-185)||(42457823-42457903)
chr2 (53-93)||(43199374-43199414)
chr2 (105-180)||(7043837-7043912)
chr2 (121-176)||(10619346-10619401)
chr2 (109-180)||(11863801-11863872)
chr2 (133-180)||(12194822-12194869)
chr2 (130-173)||(27317261-27317304)
chr2 (109-179)||(31744237-31744305)
chr2 (55-93)||(34339866-34339904)
chr2 (111-173)||(44589922-44589984)
chr2 (105-177)||(3611108-3611181)
chr2 (54-95)||(36114594-36114635)
chr2 (53-185)||(12313243-12313368)
chr2 (109-180)||(15305526-15305598)
chr2 (149-180)||(9174694-9174725)
chr2 (53-100)||(18962108-18962155)
chr2 (109-180)||(28330428-28330498)
chr2 (63-94)||(33857103-33857134)
chr2 (127-177)||(41449791-41449839)
chr2 (145-180)||(43036510-43036545)
chr2 (63-139)||(4026738-4026807)
chr2 (130-180)||(5745560-5745610)
chr2 (118-160)||(10490503-10490545)
chr2 (32-91)||(16451087-16451142)
chr2 (53-95)||(17952771-17952813)
chr2 (53-95)||(25609754-25609796)
chr2 (106-180)||(28792326-28792400)
chr2 (115-161)||(33319948-33319994)
chr2 (53-91)||(35459872-35459910)
chr2 (141-170)||(948428-948457)
chr2 (134-179)||(2227053-2227098)
chr2 (128-177)||(4773084-4773133)
chr2 (62-95)||(6988073-6988106)
chr2 (126-179)||(9395011-9395064)
chr2 (57-86)||(13325537-13325566)
chr2 (142-179)||(14220960-14220997)
chr2 (120-177)||(16451021-16451078)
chr2 (142-179)||(27316943-27316980)
chr2 (124-185)||(33981026-33981087)
chr2 (140-180)||(2195850-2195890)
chr2 (52-100)||(3458610-3458658)
chr2 (55-95)||(3673765-3673805)
chr2 (133-180)||(6167425-6167473)
chr2 (53-93)||(11513858-11513898)
chr2 (109-153)||(26201925-26201969)
chr2 (120-156)||(31561893-31561929)
chr2 (124-180)||(36285252-36285308)
chr2 (53-93)||(37292417-37292457)
chr2 (145-177)||(41516874-41516906)
[»] chr6 (48 HSPs)
chr6 (109-179)||(34430587-34430657)
chr6 (53-185)||(264246-264371)
chr6 (104-185)||(35069427-35069508)
chr6 (109-180)||(6538387-6538458)
chr6 (114-185)||(9632776-9632847)
chr6 (109-180)||(24626165-24626236)
chr6 (105-180)||(23063643-23063718)
chr6 (131-177)||(10645470-10645516)
chr6 (131-180)||(14929604-14929653)
chr6 (120-180)||(32014097-32014157)
chr6 (105-179)||(2455145-2455220)
chr6 (105-179)||(9559656-9559730)
chr6 (109-163)||(18076083-18076137)
chr6 (57-180)||(8147575-8147698)
chr6 (9-138)||(9093579-9093704)
chr6 (125-180)||(658580-658635)
chr6 (110-177)||(847941-848008)
chr6 (56-95)||(2735027-2735066)
chr6 (53-100)||(28621180-28621227)
chr6 (53-95)||(1402954-1402996)
chr6 (33-95)||(24836249-24836311)
chr6 (126-171)||(18610947-18610992)
chr6 (124-180)||(30926410-30926464)
chr6 (120-173)||(33943147-33943200)
chr6 (130-179)||(34430885-34430934)
chr6 (55-95)||(10749300-10749340)
chr6 (107-179)||(24982635-24982707)
chr6 (56-100)||(28660833-28660877)
chr6 (52-95)||(27595636-27595679)
chr6 (55-90)||(29296365-29296400)
chr6 (109-180)||(29754208-29754279)
chr6 (105-179)||(31686559-31686634)
chr6 (109-164)||(32014178-32014233)
chr6 (53-92)||(32206090-32206129)
chr6 (53-95)||(507178-507220)
chr6 (53-91)||(3785770-3785808)
chr6 (53-95)||(7713983-7714025)
chr6 (141-179)||(9604741-9604779)
chr6 (57-95)||(11340699-11340737)
chr6 (53-91)||(20671935-20671973)
chr6 (109-181)||(26550332-26550405)
chr6 (102-179)||(34910509-34910585)
chr6 (56-100)||(2027479-2027523)
chr6 (68-100)||(4029581-4029613)
chr6 (129-173)||(8365113-8365157)
chr6 (62-90)||(11363447-11363475)
chr6 (147-179)||(13907491-13907523)
chr6 (52-88)||(27693508-27693544)
[»] chr4 (70 HSPs)
chr4 (105-179)||(50662847-50662921)
chr4 (9-177)||(3155486-3155650)
chr4 (105-179)||(44863077-44863151)
chr4 (105-180)||(35571947-35572021)
chr4 (122-180)||(27025-27083)
chr4 (109-179)||(50681218-50681288)
chr4 (104-180)||(30066880-30066957)
chr4 (112-179)||(11389407-11389474)
chr4 (53-180)||(26520299-26520420)
chr4 (9-180)||(51629991-51630158)
chr4 (120-181)||(17204007-17204068)
chr4 (124-181)||(25904358-25904415)
chr4 (106-177)||(679136-679208)
chr4 (132-180)||(45935365-45935413)
chr4 (105-179)||(2987069-2987144)
chr4 (109-179)||(43505829-43505897)
chr4 (125-180)||(44797762-44797817)
chr4 (111-161)||(30377813-30377863)
chr4 (108-177)||(22539165-22539234)
chr4 (9-95)||(47800588-47800670)
chr4 (131-179)||(47119086-47119134)
chr4 (127-179)||(49202527-49202579)
chr4 (105-180)||(1203232-1203302)
chr4 (141-180)||(4212812-4212851)
chr4 (105-156)||(21731768-21731819)
chr4 (141-180)||(27330186-27330225)
chr4 (53-95)||(4071840-4071882)
chr4 (53-95)||(27043900-27043942)
chr4 (54-96)||(44249243-44249285)
chr4 (111-180)||(19494784-19494853)
chr4 (124-179)||(53294234-53294288)
chr4 (110-166)||(1242401-1242457)
chr4 (109-185)||(13126736-13126812)
chr4 (109-173)||(15173429-15173493)
chr4 (55-95)||(17884026-17884066)
chr4 (108-180)||(35571746-35571817)
chr4 (109-177)||(44138442-44138510)
chr4 (105-180)||(45104522-45104597)
chr4 (105-161)||(49004085-49004141)
chr4 (105-153)||(55084589-55084637)
chr4 (125-180)||(437375-437430)
chr4 (109-180)||(18814962-18815032)
chr4 (53-174)||(25332656-25332774)
chr4 (53-95)||(8130132-8130174)
chr4 (56-94)||(11917518-11917556)
chr4 (143-177)||(20108912-20108946)
chr4 (53-91)||(25885821-25885859)
chr4 (53-95)||(30024658-30024700)
chr4 (68-163)||(31851343-31851439)
chr4 (142-180)||(34213730-34213768)
chr4 (131-180)||(39178376-39178426)
chr4 (143-177)||(39603594-39603628)
chr4 (53-95)||(49219097-49219139)
chr4 (56-97)||(6978782-6978823)
chr4 (107-156)||(23277317-23277366)
chr4 (147-180)||(23319728-23319761)
chr4 (150-179)||(25885756-25885785)
chr4 (134-179)||(27043958-27044003)
chr4 (55-95)||(38346058-38346099)
chr4 (57-90)||(40532946-40532979)
chr4 (120-180)||(47771875-47771935)
chr4 (111-179)||(50298411-50298480)
chr4 (54-95)||(52746911-52746952)
chr4 (149-177)||(22030092-22030120)
chr4 (63-95)||(23503517-23503549)
chr4 (64-100)||(30770836-30770872)
chr4 (104-136)||(34430800-34430832)
chr4 (148-180)||(34430831-34430863)
chr4 (145-177)||(44248741-44248773)
chr4 (145-180)||(54214894-54214930)
[»] chr3 (75 HSPs)
chr3 (105-179)||(402656-402730)
chr3 (109-178)||(1508710-1508779)
chr3 (109-180)||(31365401-31365472)
chr3 (105-179)||(34235191-34235265)
chr3 (57-179)||(30956700-30956825)
chr3 (57-179)||(30972512-30972637)
chr3 (128-180)||(46886835-46886887)
chr3 (123-180)||(944363-944421)
chr3 (109-179)||(35959585-35959655)
chr3 (105-173)||(28240213-28240281)
chr3 (109-180)||(20880347-20880418)
chr3 (126-179)||(20003430-20003483)
chr3 (124-185)||(47132242-47132303)
chr3 (124-180)||(34034041-34034097)
chr3 (109-180)||(20170393-20170464)
chr3 (105-180)||(31403238-31403313)
chr3 (126-177)||(34610942-34610993)
chr3 (142-180)||(849552-849590)
chr3 (109-185)||(3845691-3845767)
chr3 (109-177)||(19983653-19983721)
chr3 (105-180)||(30574027-30574103)
chr3 (109-185)||(53789590-53789666)
chr3 (110-173)||(12833871-12833934)
chr3 (113-180)||(20257430-20257497)
chr3 (105-164)||(23815949-23816008)
chr3 (105-180)||(29002955-29003030)
chr3 (124-179)||(36631195-36631250)
chr3 (53-100)||(37689454-37689501)
chr3 (105-160)||(40665329-40665384)
chr3 (53-95)||(1395629-1395671)
chr3 (124-178)||(2719341-2719395)
chr3 (134-187)||(37138234-37138288)
chr3 (105-175)||(47249583-47249653)
chr3 (121-178)||(19836544-19836601)
chr3 (111-180)||(24684954-24685023)
chr3 (106-179)||(35328279-35328351)
chr3 (124-177)||(39442321-39442374)
chr3 (120-179)||(5435712-5435772)
chr3 (110-166)||(7814265-7814321)
chr3 (55-95)||(10101548-10101588)
chr3 (55-95)||(10212473-10212513)
chr3 (109-173)||(28795961-28796025)
chr3 (124-156)||(30443658-30443690)
chr3 (53-93)||(32555051-32555091)
chr3 (141-177)||(36507241-36507277)
chr3 (109-180)||(139802-139873)
chr3 (56-95)||(15304420-15304459)
chr3 (105-176)||(25447359-25447430)
chr3 (105-175)||(35127486-35127557)
chr3 (56-95)||(37788818-37788857)
chr3 (142-185)||(42747913-42747956)
chr3 (124-179)||(42800057-42800112)
chr3 (52-95)||(42808937-42808980)
chr3 (52-95)||(42809259-42809302)
chr3 (142-180)||(3846043-3846081)
chr3 (57-95)||(14145870-14145908)
chr3 (62-104)||(25195373-25195415)
chr3 (125-179)||(39122834-39122887)
chr3 (111-169)||(39980610-39980668)
chr3 (134-180)||(46407503-46407549)
chr3 (107-156)||(12704123-12704172)
chr3 (150-187)||(24085485-24085522)
chr3 (128-177)||(30365679-30365728)
chr3 (144-185)||(38901961-38902002)
chr3 (109-166)||(46778356-46778413)
chr3 (126-174)||(55113549-55113598)
chr3 (63-95)||(2128331-2128363)
chr3 (145-185)||(5456735-5456775)
chr3 (147-179)||(5495812-5495844)
chr3 (105-180)||(10277382-10277458)
chr3 (55-95)||(10357391-10357431)
chr3 (55-95)||(31053162-31053202)
chr3 (63-95)||(33882986-33883018)
chr3 (105-177)||(43062579-43062651)
chr3 (145-177)||(50946407-50946439)
[»] chr7 (73 HSPs)
chr7 (109-180)||(21568757-21568828)
chr7 (105-176)||(33552936-33553007)
chr7 (126-180)||(27863843-27863897)
chr7 (108-180)||(33672958-33673030)
chr7 (113-180)||(38500051-38500118)
chr7 (125-179)||(18865195-18865249)
chr7 (120-179)||(33678663-33678722)
chr7 (105-180)||(46139822-46139897)
chr7 (105-179)||(47795838-47795912)
chr7 (111-180)||(3308383-3308452)
chr7 (53-129)||(31002882-31002957)
chr7 (120-180)||(45263963-45264023)
chr7 (109-180)||(9210498-9210569)
chr7 (109-180)||(33128627-33128698)
chr7 (106-185)||(39393692-39393770)
chr7 (120-179)||(40196248-40196307)
chr7 (57-177)||(28900760-28900884)
chr7 (105-179)||(47177517-47177591)
chr7 (108-181)||(48131227-48131300)
chr7 (100-172)||(7612346-7612419)
chr7 (111-180)||(23989615-23989684)
chr7 (71-177)||(18965800-18965905)
chr7 (105-177)||(20526635-20526707)
chr7 (107-179)||(20881753-20881825)
chr7 (105-180)||(19718887-19718962)
chr7 (105-172)||(21619295-21619362)
chr7 (104-186)||(7241445-7241527)
chr7 (141-179)||(22296366-22296404)
chr7 (53-91)||(30180013-30180051)
chr7 (115-185)||(36517480-36517550)
chr7 (126-180)||(40252242-40252296)
chr7 (53-91)||(40689056-40689094)
chr7 (124-173)||(17248434-17248483)
chr7 (134-179)||(22283860-22283905)
chr7 (63-185)||(40009345-40009460)
chr7 (109-177)||(4970917-4970985)
chr7 (125-173)||(20189153-20189201)
chr7 (149-185)||(28210320-28210356)
chr7 (125-173)||(39967805-39967853)
chr7 (124-180)||(46280403-46280459)
chr7 (141-180)||(11619347-11619386)
chr7 (113-180)||(19131240-19131307)
chr7 (149-180)||(40377997-40378028)
chr7 (53-177)||(42656397-42656515)
chr7 (141-180)||(45004636-45004675)
chr7 (109-180)||(46078017-46078088)
chr7 (109-180)||(5947031-5947098)
chr7 (145-179)||(30571088-30571122)
chr7 (120-190)||(39279632-39279702)
chr7 (107-180)||(43250796-43250870)
chr7 (105-159)||(44777097-44777151)
chr7 (54-95)||(1417222-1417263)
chr7 (141-178)||(2526113-2526150)
chr7 (147-180)||(7512311-7512344)
chr7 (142-179)||(20258394-20258431)
chr7 (142-179)||(20269458-20269495)
chr7 (55-100)||(28613606-28613651)
chr7 (62-95)||(31149606-31149639)
chr7 (62-95)||(31167898-31167931)
chr7 (105-180)||(37832254-37832335)
chr7 (111-180)||(38138610-38138679)
chr7 (53-90)||(40428518-40428555)
chr7 (131-179)||(46945775-46945824)
chr7 (13-50)||(47303492-47303529)
chr7 (134-185)||(425965-426017)
chr7 (57-89)||(21201561-21201593)
chr7 (56-88)||(22296301-22296333)
chr7 (53-93)||(30134009-30134049)
chr7 (142-178)||(32544861-32544897)
chr7 (55-95)||(39591539-39591579)
chr7 (63-95)||(43152982-43153014)
chr7 (53-93)||(43250749-43250789)
chr7 (136-180)||(46407079-46407123)
[»] scaffold0050 (1 HSPs)
scaffold0050 (114-179)||(58475-58540)
[»] scaffold0012 (1 HSPs)
scaffold0012 (109-173)||(207710-207774)
[»] scaffold0024 (2 HSPs)
scaffold0024 (52-90)||(21347-21385)
scaffold0024 (52-90)||(58900-58938)
[»] scaffold0018 (1 HSPs)
scaffold0018 (142-180)||(157977-158015)
[»] scaffold0549 (2 HSPs)
scaffold0549 (57-95)||(1798-1836)
scaffold0549 (57-95)||(3888-3926)


Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 99)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 47498858 - 47499069
Alignment:
Q  5 ttttagcttattttcataagttcattgagatagcttacgaaaacaggcagcttatacgaaaataatttaactttattttatcttttgttattaaaaattt 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  47498858 ttttagcttattttcataagttgattgagatagcttacgaaaacaggcagcttatacgaaaataatttaactttattttatcttttgttgttaaaaatta 47498957  T
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcctgaaagtcacgttgcatggt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47498958 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcctgaaagtcacgttgcatggt 47499057  T
Q  205 gcaaaatcatat 216  Q
    ||||||||||||    
T  47499058 gcaaaatcatat 47499069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 5894278 - 5894353
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  5894278 aaatagcttatacataagcgcttatcatgataagcacttgtgctataagcttcaaataagctgtttatccaaacag 5894353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 33541837 - 33541906
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  33541837 agcttatacataagcgcttatcatgataaacacttgtgctataaactgcaaataagttgtttatccaaac 33541906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 37473340 - 37473269
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  37473340 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 37473269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 27820468 - 27820530
Alignment:
Q  118 acaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  27820468 acaagcccttatcatgataagcgcttatgctataagctgcaaataagttgtttatccaaacag 27820530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 51688630 - 51688576
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  51688630 cttatcatgataagcacttgtactataagctgcaaataagttgtttatccaaaca 51688576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 41195325 - 41195394
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  41195325 cttatacataagcgattatcaggataagcgcttgtgctataagctgcaaataagttatttatccaaacag 41195394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 9572178 - 9572303
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    ||||||||| |||  |||||||||||||||||||||||| |||  |||       ||||| |||||  |||||| ||||||||| |||||||||||||||    
T  9572178 agcttatacaaaagcaatttaactttattttatcttttgctatagaaa-------tagctaatacattagcgctgatcatgataggcacttgtgctataa 9572270  T
Q  153 gctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||||||| || || ||||||| ||||    
T  9572271 gctgcaaataagttattcattcaaacagggcct 9572303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 14331731 - 14331654
Alignment:
Q  108 tagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    ||||||||||| ||| ||||||||||| |||| ||||||||||||||| |||||||| |||||||| |||||| ||||    
T  14331731 tagcttatacataagtgcttatcatgagaagcgcttgtgctataagcttcaaataagctgtttatctaaacagggcct 14331654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 24562452 - 24562503
Alignment:
Q  129 tcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  24562452 tcatgataagcacatgtgctataagctgcaaataagctgtttatccaaacag 24562503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 3234153 - 3234222
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||| | |||||||||||||||||||| ||||||||||||| |||||| |||||  |||||||||||    
T  3234153 gcttatatataagcgcttatcatgataagcgcttgtgctataagttgcaaacaagttagttatccaaaca 3234222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 6556946 - 6556889
Alignment:
Q  122 gcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||    
T  6556946 gcgcttatcatgataagcacttgtgctataaactacaaagaagctgtttatccaaaca 6556889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 9656650 - 9656534
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    |||||||| |||||||||||||||||||||||| ||||| |||  |||   ||||||||||||||| | | |||||||||||||||   ||||||||  |    
T  9656650 agcttatatgaaaataatttaactttattttattttttgctatagaaa---taaatagcttatacataggtgcttatcatgataagtgtttgtgctaata 9656554  T
Q  153 gctgcaaataagttgtttat 172  Q
    |||| ||| ||| |||||||    
T  9656553 gctgtaaagaagctgtttat 9656534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 22344031 - 22343958
Alignment:
Q  107 atagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||| || |||| ||||||||||||||| |||||||  |||| ||||||||||||| ||||||||||||    
T  22344031 atagcttatgcataagctcttatcatgataagcgcttgtgcggtaagttgcaaataagttgattatccaaacag 22343958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 27146363 - 27146436
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    ||||| |||||||| || |||||||||||||| | |||| |||||||||||||||||||| | |||||||||||    
T  27146363 aaataccttatacataaacgcttatcatgatatgtacttatgctataagctgcaaataagctatttatccaaac 27146436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 473096 - 473036
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||| |||||||||| ||| || | |||||||||||||||||||||||||||||||    
T  473096 aagcgcttaccatgataagcgcttttgttgtaagctgcaaataagttgtttatccaaacag 473036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 17727235 - 17727295
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||| |||||||  ||||||||||||||| || |||||||||||||||||||||    
T  17727235 aagcgcttatcttgataagtgcttgtgctataagctacacataagttgtttatccaaacag 17727295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 33546590 - 33546650
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| ||||||||||| |||||||||| |||||||| |||||| |||||||||||||||    
T  33546590 aagcgcatatcatgataaacacttgtgctttaagctgcgaataagctgtttatccaaacag 33546650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 38116300 - 38116356
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat 161  Q
    |||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||    
T  38116300 aaatagcttatacataagcgcttatcatgataagcgcatgtactataagctgcaaat 38116356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 41505617 - 41505557
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| |||||||| ||||||  ||||||||||||||||||||||| |||||||||||||||    
T  41505617 aagcacttatcatcataagcgtttgtgctataagctgcaaataagctgtttatccaaacag 41505557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 1510438 - 1510509
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| | ||| |||||||| ||||||| ||||||||||||| | |||||||| |||||||||||||||    
T  1510438 agcttatatataagtgcttatcaagataagcgcttgtgctataagatacaaataagctgtttatccaaacag 1510509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 14576782 - 14576853
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| | ||| |||||||||||||||  |||||||||||||||| ||||||| ||||||||| |||||    
T  14576782 agcttataaataagtgcttatcatgataagagcttgtgctataagctggaaataagatgtttatcccaacag 14576853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 30191930 - 30191863
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    |||||||||||| ||||||||| |||||||||| ||||||||| || ||||||| | |||||||||||    
T  30191930 cttatacacaagtgcttatcataataagcacttctgctataagttgtaaataagctatttatccaaac 30191863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 38247394 - 38247324
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||| || ||||||||||||  ||||||||||||||||||||| || |||||||||||||||    
T  38247394 agcttatacataagtgcatatcatgataagtgcttgtgctataagctgcaaat-agctgtttatccaaacag 38247324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 42391307 - 42391241
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatcca 175  Q
    |||||||||| |||| |||||||||||||||  ||||||| ||||| |||||||| |||||||||||    
T  42391307 agcttatacataagcacttatcatgataagcttttgtgctgtaagccgcaaataaattgtttatcca 42391241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 1232964 - 1233009
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  1232964 cttatacgaaaataatttaactttattttatgttttgttataaaaa 1233009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 1829075 - 1829144
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| |||||||||||||||||||   || ||||||| | | ||||||||||||||||||||||||    
T  1829075 cttatacataagcgcttatcatgataagtgtttatgctataggtttcaaataagttgtttatccaaacag 1829144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 5741601 - 5741532
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| ||||||||||||||||| |  ||||||||||||||  |||||||| | |||||||||||||    
T  5741601 cttatacataagcgcttatcatgataggtgcttgtgctataagccacaaataagatatttatccaaacag 5741532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 4256112 - 4256152
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  4256112 agcttatacgaaaataatttaactttattgtatcttttgtt 4256152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 10666014 - 10665960
Alignment:
Q  129 tcatgataagcacttgtgctataagctgc---aaataagttgtttatccaaacag 180  Q
    |||||||||||| ||||||||||||||||   |||||||||||||||||||||||    
T  10666014 tcatgataagcatttgtgctataagctgctgtaaataagttgtttatccaaacag 10665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 24552469 - 24552517
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgc 157  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  24552469 agcttgtacataagcgcttatcatgataatcacttgtgctataagctgc 24552517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 45975646 - 45975570
Alignment:
Q  104 taaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| ||||||| ||| |||||||||||||||   ||||| |||||||| |||||||| | |||||||||||||    
T  45975646 taaatagtttatacataagggcttatcatgataagtgtttgtgttataagctacaaataagctatttatccaaacag 45975570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 180
Target Start/End: Complemental strand, 10744309 - 10744187
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctata 151  Q
    ||||||||| ||||| |||| |||||||||||||||||| | || ||||       |||||||||||  ||| ||| ||||||||||| ||| |||||||    
T  10744309 cagcttataggaaaacaattcaactttattttatcttttttcatcaaaa-------tagcttatacattagcacttgtcatgataagcgcttatgctata 10744217  T
Q  152 agctg-caaataagttgtttatccaaacag 180  Q
    |||||  || |||||||||||| |||||||    
T  10744216 agctgagaattaagttgtttatacaaacag 10744187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 17834292 - 17834335
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  17834292 ataagcacttgtgctataagctacaattaagttgtttatccaaa 17834335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 29904684 - 29904633
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||| ||||  |||||||||||| ||||||||||||||||||    
T  29904684 ttatcatgataagcgcttgaactataagctgcatataagttgtttatccaaa 29904633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 30581738 - 30581683
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||| ||| |||||| |||||||||||||||||  ||||||||||||||    
T  30581738 gcttatcatgaaaagtacttgttctataagctgcaaataaactgtttatccaaaca 30581683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 38189695 - 38189656
Alignment:
Q  140 acttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  38189695 acttgtgctataaactgcaaataagttgtttatccaaaca 38189656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 45855770 - 45855731
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  45855770 cttgtgctataagctgcaaataagttggttatccaaacag 45855731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 8081823 - 8081769
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||| |||||   |||||||||||| ||||||||||||||||||||    
T  8081823 cttatcatgataatcacttaatctataagctgcagataagttgtttatccaaaca 8081769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 15687143 - 15687185
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  15687143 agcttatacgaaaacaatttaactttattttatattttgttat 15687185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 158
Target Start/End: Complemental strand, 27976406 - 27976372
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgca 158  Q
    |||||||||||||||||||||||||||||||||||    
T  27976406 gcttatcatgataagcacttgtgctataagctgca 27976372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 28467377 - 28467419
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  28467377 agcttatatgaaaataatttgactttattttatcttttgttat 28467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 29128368 - 29128410
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| |||||||||| |||||||||||||||||||||||||    
T  29128368 agcttaaacgaaaataaattaactttattttatcttttgttat 29128410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 33204434 - 33204494
Alignment:
Q  32 agatagcttacgaaaacagg---cagcttatacgaaaataatttaactttattttatcttt 89  Q
    |||||||||| ||||||||    |||||||||||||||||| |||||||||||||||||||    
T  33204434 agatagcttatgaaaacagcttacagcttatacgaaaataaattaactttattttatcttt 33204494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 37841998 - 37841956
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  37841998 agcttatacgaaaacaatttaactttattttatcatttgttat 37841956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 38578527 - 38578485
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    
T  38578527 agcttatacaaaaataatttaactttatgttatcttttgttat 38578485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 39658550 - 39658588
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttg 91  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  39658550 agcttatacgaaaataatttaactttactttatcttttg 39658588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 43230894 - 43230944
Alignment:
Q  130 catgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| ||||||||||||||||||| |||| || ||||||||||||||||    
T  43230894 catgatgagcacttgtgctataagctccaaacaatttgtttatccaaacag 43230944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 46423189 - 46423151
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  46423189 cttgtgttataagctgcaaataagttgtttatccaaaca 46423151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 51190765 - 51190727
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  51190765 ttgtgctataagctacaaataagttgtttatccaaacag 51190727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 488943 - 488898
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||||||||| |||||||||| || |||||||||    
T  488943 ataagcacttgtgctataagcttcaaataagttattaatccaaaca 488898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 5720920 - 5720851
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| ||||||||||||||||| |  |||||| |||||||  |||||||| | |||||||||||||    
T  5720920 cttatacataagcgcttatcatgataggtgcttgtgttataagccacaaataagatatttatccaaacag 5720851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 36151577 - 36151618
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttatt 96  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  36151577 cttatacgaaaacaatttgactttattttatcttttgttatt 36151618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 38170762 - 38170803
Alignment:
Q  53 agcttatacgaaaataatttaac-tttattttatcttttgtt 93  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  38170762 agcttatacgaaaataatttaacttttattttatcttttgtt 38170803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 49888813 - 49888730
Alignment:
Q  10 gcttattttcataagttcattgagatagcttacgaaaacaggca---gcttatacgaaaataatttaactttattttatctttt 90  Q
    ||||||||||||||||||  | |||||||||| |||||||   |   ||||||||||||| |||| ||||||||||||||||||    
T  49888813 gcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatctttt 49888730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 24417817 - 24417869
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaa 177  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||||||||||    
T  24417817 ttatcatgataagcacttgtgttataagctgcaaattaacctgtttatccaaa 24417869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 27970428 - 27970460
Alignment:
Q  145 tgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||||||||||||||||||||||    
T  27970428 tgctataagctgcaaataagttgtttatccaaa 27970460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 30815707 - 30815747
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  30815707 cttatatgaaaatagtttaactttattttatcttttgttat 30815747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 31774167 - 31774223
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagtt 166  Q
    ||||||| | ||| |||||| ||||||||||||| | ||||||||||||||||||||    
T  31774167 gcttataaataagtgcttattatgataagcacttatactataagctgcaaataagtt 31774223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 37593784 - 37593856
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaa 176  Q
    ||||| |||||||| || | |||||| |||||||| ||| |||| ||||||||||| ||||||||||||||||    
T  37593784 aaataccttatacataaacacttatcgtgataagcgcttttgctttaagctgcaaattaagttgtttatccaa 37593856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 48064241 - 48064189
Alignment:
Q  128 atcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    |||||||||||  ||| |||||||||||||||| |||||||||||||||||||    
T  48064241 atcatgataagggcttatgctataagctgcaaattaagttgtttatccaaaca 48064189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 3887760 - 3887791
Alignment:
Q  149 ataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||||||||||||||||||    
T  3887760 ataagctgcaaataagttgtttatccaaacag 3887791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 5709499 - 5709432
Alignment:
Q  113 tatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| |||||||||| ||||||     |||||||||||||| ||||||||||||| ||||||||||    
T  5709499 tatacataagcgcttataatgatacttgtttgtgctataagcttcaaataagttgttcatccaaacag 5709432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 7069254 - 7069183
Alignment:
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||||||||||  ||| |||||||| |||||  ||  ||||||||||||| ||||||| ||||||||||||    
T  7069254 aatagcttatacttaagtgcttatcacgataaataccagtgctataagctggaaataagctgtttatccaaa 7069183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 15784380 - 15784299
Alignment:
Q  5 ttttagcttattttcataagttcattgagatagcttacgaaaacaggcagcttatacgaaaataatttaactttattttatctttt 90  Q
    |||||||||||||||| ||||||    ||||||||||  |||||   ||||||||||||||| ||||||||||||||||| |||||    
T  15784380 ttttagcttattttcacaagttctccaagatagcttat-aaaac---cagcttatacgaaaacaatttaactttattttacctttt 15784299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 15942289 - 15942250
Alignment:
Q  104 taaatagcttatacacaagcgcttatcatgataagcactt 143  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  15942289 taaatagcttatacataagcacttatcatgataagcactt 15942250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 17830080 - 17830025
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||  |||||| ||||||||| | ||| ||||||||||||||||    
T  17830080 gcttatcatgataagtgcttgtgatataagctgaagatatgttgtttatccaaaca 17830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 23198411 - 23198364
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||| ||||||||||||| || ||||||||||||||||||| ||||||    
T  23198411 ttattatgataagcacttatgttataagctgcaaataagttttttatc 23198364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 34795565 - 34795604
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  34795565 cttgtgctataagatgcaaataagctgtttatccaaacag 34795604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 36070250 - 36070203
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||||| |||| | |||||||||||||||||||||||||||| ||||    
T  36070250 agcttatccgaagacaatttaactttattttatcttttgttataaaaa 36070203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 52559901 - 52559940
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  52559901 ttatacgaaaataatttgactttattttatattttgttat 52559940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 1509693 - 1509623
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||| | |||| ||||||||||||||   ||||||| ||||||  ||||||| ||||||||||||||    
T  1509693 agcttatatataagcacttatcatgataagtgattgtgctgtaagctaaaaataagctgtttatccaaaca 1509623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 4920894 - 4920940
Alignment:
Q  134 ataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    |||||||||| |||||||||||||||| |||| ||||||||||||||    
T  4920894 ataagcacttatgctataagctgcaaattaagctgtttatccaaaca 4920940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 11211116 - 11211078
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  11211116 cttatatgaaaaaaatttaactttattttatcttttgtt 11211078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 17603525 - 17603571
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| ||||||||||||||| ||||||||  ||||||||||||||    
T  17603525 ataagcgcttgtgctataagctacaaataagccgtttatccaaacag 17603571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 34619448 - 34619490
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||| |||| |||||||| |||||||||||||||||||    
T  34619448 agcttatacaaaaacaatttaaccttattttatcttttgttat 34619490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 37617563 - 37617601
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  37617563 cttgtgctataagctgcaaataaattgtttatacaaaca 37617601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 39906554 - 39906524
Alignment:
Q  148 tataagctgcaaataagttgtttatccaaac 178  Q
    |||||||||||||||||||||||||||||||    
T  39906554 tataagctgcaaataagttgtttatccaaac 39906524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 49938664 - 49938618
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| |||||||||||||||||| ||||| | |||||||||||||    
T  49938664 ataagcgcttgtgctataagctgcagataagctttttatccaaacag 49938618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 836491 - 836524
Alignment:
Q  148 tataagctgcaaataagttgtttatccaaacagt 181  Q
    ||||||||||||||||||||||||||||| ||||    
T  836491 tataagctgcaaataagttgtttatccaatcagt 836524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 9507115 - 9507184
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctg-caaataagttgtttatc 173  Q
    ||||||||||||||  || | |||| ||||||||||||| ||||||||| || ||| |||||||||||||    
T  9507115 aaatagcttatacatgagtgtttattatgataagcacttatgctataagatgacaattaagttgtttatc 9507184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 10143327 - 10143278
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatcc 174  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||||||    
T  10143327 ttatcatgataagcgcttgtgctgtaagcagcaaattaagttgtttatcc 10143278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 15477496 - 15477443
Alignment:
Q  123 cgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaa 176  Q
    ||||||||||||| ||||||||  ||||||||| |||||||| | |||||||||    
T  15477496 cgcttatcatgattagcacttgcactataagctacaaataagctctttatccaa 15477443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 27145808 - 27145845
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgtt 93  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  27145808 ttatacgaaaataatttaaatttattttatctgttgtt 27145845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 49825090 - 49825147
Alignment:
Q  104 taaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat 161  Q
    ||||||||||||||| ||  || ||||||||||||| ||||||| |||||||| ||||    
T  49825090 taaatagcttatacataaatgcatatcatgataagctcttgtgcaataagctgaaaat 49825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 11137845 - 11137793
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat 161  Q
    |||||||||| ||  ||||||||||||| |||||| |||||||||||| ||||    
T  11137845 agcttatacataattgcttatcatgatatgcacttatgctataagctgtaaat 11137793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 14385892 - 14385937
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctg 156  Q
    |||||||||| |||| ||||||||||||||||||  ||||||||||||    
T  14385892 agcttatacataagctcttatcatgataagcact--tgctataagctg 14385937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 25549101 - 25549157
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagtt 166  Q
    ||||||| | ||| |||||| ||||||||||| | ||| ||||||||||||||||||    
T  25549101 gcttataaataagtgcttattatgataagcacctatgccataagctgcaaataagtt 25549157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 27146320 - 27146356
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttg 91  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  27146320 cttatacgaaactaatttaaatttattttatcttttg 27146356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 27738250 - 27738290
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||| ||||| ||||| ||||||||||||||||||||    
T  27738250 agcttatatgaaaacaatttgactttattttatcttttgtt 27738290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 27976296 - 27976264
Alignment:
Q  147 ctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| ||||||||||||||||||||||    
T  27976296 ctataagctgtaaataagttgtttatccaaaca 27976264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 29793782 - 29793742
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||||||||| || |||||||||| ||||||||||||    
T  29793782 agcttatacgaaaacaacttaactttatgttatcttttgtt 29793742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 31517810 - 31517850
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||| ||||  ||||||||||||||||||||||||||    
T  31517810 agcttatatgaaatcaatttaactttattttatcttttgtt 31517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 33186217 - 33186169
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgc 157  Q
    ||||||| || ||||| ||||||| |||||||| |||||||||||||||    
T  33186217 agcttatgcataagcggttatcataataagcacctgtgctataagctgc 33186169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 34290179 - 34290119
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||| ||||||  || |||| |||  |||||||||| |||||||||||||||    
T  34290179 aagcgcttatcataataagcgtttatgctgtaaattgcaaataagatgtttatccaaacag 34290119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 46225735 - 46225699
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  46225735 ttgtgctataagctccaaataaattgtttatccaaac 46225699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 46252767 - 46252799
Alignment:
Q  68 aatttaactttattttatcttttgttattaaaa 100  Q
    |||||||||||||||||||||||||||| ||||    
T  46252767 aatttaactttattttatcttttgttataaaaa 46252799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 51190859 - 51190823
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttg 91  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  51190859 cttatacaaaaacaatttaactttattttatcttttg 51190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 52286678 - 52286638
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||| ||||||  ||||||||||||||||||||||||    
T  52286678 agcttatatgaaaattgtttaactttattttatcttttgtt 52286638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 1e-27; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 26215493 - 26215376
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataagct 155  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||       ||||||||||| ||||||||||||| |||||| || ||||||||||||    
T  26215493 ttatacgaaaatagtttaactttattttatcttttgttatagaaa-------tagcttatacataagcgcttatcattataagcgctcgtgctataagct 26215401  T
Q  156 gcaaataagttgtttatccaaacag 180  Q
    | ||||||||||||||| |||||||    
T  26215400 gaaaataagttgtttatacaaacag 26215376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 33808354 - 33808289
Alignment:
Q  5 ttttagcttattttcataagttcattgagatagcttacgaaaacaggcagcttatacgaaaataat 70  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33808354 ttttagcttattttcataagttcattgagatagcttacaaaaacaggcagcttatacgaaaataat 33808289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 14956424 - 14956494
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  14956424 agcttatacataagtgcttatcatgataagcgattgtgctataagctgcaaataagttgtttatccaaaca 14956494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 40859833 - 40859885
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgc 157  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40859833 aaatagcttatacataagcgcttatcatgataagcacttgtgctataagctgc 40859885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 1058203 - 1058274
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| |||||||||||||  ||||| |||||||||||||||||||||||| ||||||| |||||||    
T  1058203 agcttatacataagcgcttatcatagtaagcgcttgtgctataagctgcaaataagctgtttattcaaacag 1058274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 2840314 - 2840239
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgc-aaataagttgtttatccaaaca 179  Q
    ||||||||||| || |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  2840314 aaatagcttattcataagcacttatcatgataagcacttatgctataagctgcaaaataagttgtttatacaaaca 2840239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 2845001 - 2844926
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgc-aaataagttgtttatccaaaca 179  Q
    ||||||||||| || |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  2845001 aaatagcttattcataagcacttatcatgataagcacttatgctataagctgcaaaataagttgtttatacaaaca 2844926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 5404572 - 5404493
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcc 184  Q
    |||||||||||| ||||| | |||||||||||||||||| | || ||| |||||||||||||||||||||||| ||||||    
T  5404572 aaatagcttatatacaagtggttatcatgataagcacttattctttaatctgcaaataagttgtttatccaaatagtgcc 5404493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 29819026 - 29819080
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  29819026 ttatcatgataagcccttttgctataagctgcaaataagttgtttatccaaacag 29819080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 40981056 - 40980995
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||    
T  40981056 gcttatcaagataagcgcttgtgctataagctgcaaataagctgtttatccaaacagggcct 40980995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 36963485 - 36963545
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  36963485 aagcgtttatcatgataagcgcttgtgctataagctgcaaataaattgtttacccaaacag 36963545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 37353363 - 37353439
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat-aagttgtttatccaaacag 180  Q
    |||||| || |||| ||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||||||||    
T  37353363 aaatagtttgtacataagcgcttatcatcataagcatttatgctataagctgcaaatcaagttgtttatccaaacag 37353439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 2833445 - 2833520
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgc-aaataagttgtttatccaaaca 179  Q
    ||||||||||| || |||| ||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||    
T  2833445 aaatagcttattcataagcacttatcatgataagcacttatgctataagctgcaaaataagcagtttatccaaaca 2833520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 34236117 - 34236042
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| |||||| || ||| |||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||    
T  34236117 aaattgcttatccataagggcttatcatgataaccgtttgtgttataagctgcaaataagttgtttatccaaacag 34236042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 41475133 - 41475248
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataagct 155  Q
    ||||||||||| ||||||||| |||||||||||||| |||  ||||||     |||||||||| ||| ||||||||||| |||   ||||  |||||| |    
T  41475133 ttatacgaaaacaatttaactgtattttatcttttgctat--aaaatt-----agcttatacataagtgcttatcatgacaagtgtttgtcttataagtt 41475225  T
Q  156 gcaaataagttgtttatccaaac 178  Q
    |||||||||||||||||||||||    
T  41475226 gcaaataagttgtttatccaaac 41475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 37444485 - 37444586
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    |||||||||||||| |||||||||||| |||||||||||||||    | |   ||||||||||||| |||||||||||||||||||  ||| |||| |||    
T  37444485 agcttatacgaaaacaatttaactttactttatcttttgttat----agt---aatagcttatacataagcgcttatcatgataagtgcttatgctttaa 37444577  T
Q  153 gctgcaaat 161  Q
     ||||||||    
T  37444578 cctgcaaat 37444586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 9130439 - 9130506
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaa 176  Q
    |||||||||| ||| | |||||||||| | |||||||||||||||||||||||||| | |||||||||    
T  9130439 agcttatacataagtgattatcatgatgaccacttgtgctataagctgcaaataagctatttatccaa 9130506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 9956927 - 9956998
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaa 176  Q
    |||||||| | ||| |||||  ||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  9956927 aaatagctcaaacataagcgtgtatcatgataagtgcttgtgctataagctacaaataagttgtttatccaa 9956998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 40637423 - 40637486
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    ||||||| | ||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  40637423 gcttataaataagtgcttattatgataagcacttatgctataagctgcaaataagttttttatc 40637486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 900832 - 900894
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaata-agttgtttatccaaacagtgcctga 187  Q
    ||||||||||||||  |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  900832 ttatcatgataagcgtttgtgctataagatgcaaatatagttgtttatccaaacagtggctga 900894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 38750299 - 38750229
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| |||||||||||||||||||  | ||| ||  ||||| |||||||||||||||||||||||    
T  38750299 agcttatacataagcgcttatcatgataagtgcatgtacttcaagcttcaaataagttgtttatccaaaca 38750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 15179091 - 15179038
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataag 164  Q
    |||||||| ||||||| ||||||||| |||||||||||||||| ||||||||||    
T  15179091 cttatacataagcgctcatcatgatatgcacttgtgctataagttgcaaataag 15179038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 41821498 - 41821440
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtt 169  Q
    |||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||| ||||    
T  41821498 agcttatacataagtgcttatcatgataagcacttgtgc--taagctgcaaataagctgtt 41821440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 42237492 - 42237540
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaa 101  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  42237492 agcttatatgaaaacaatttaactttattttatcttttgttataaaaaa 42237540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 4389873 - 4389818
Alignment:
Q  131 atgataagcacttgtgctataagctgc-aaataagttgtttatccaaacagtgcct 185  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||    
T  4389873 atgataagcacttctgctataagctgcaaaataagttatttatccaaacagggcct 4389818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 21119072 - 21119119
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  21119072 ttattatgataagcacttatgctataagctgcaaataagttttttatc 21119119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 35534750 - 35534809
Alignment:
Q  121 agcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||| ||||||| | | |||||||||||||||||||||| ||||| |||||||||    
T  35534750 agcgcttataatgataaacgcctgtgctataagctgcaaataagctgtttttccaaacag 35534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 41589623 - 41589577
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagtt 166  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||    
T  41589623 aagcgcttatcatgataaatgcttgtgctataagctgcaaataagtt 41589577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 1929993 - 1929948
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||| ||||||||||||||||||| ||||||||||||| |||||    
T  1929993 ataagcgcttgtgctataagctgcaagtaagttgtttatcaaaaca 1929948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 12976154 - 12976086
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| |||||||||||||||| ||  | |||||||   |||||||||||| |||||||||||||||    
T  12976154 agcttatacataagcgcttatcatgatgagtgcctgtgcta---gctgcaaataagctgtttatccaaacag 12976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 15180463 - 15180418
Alignment:
Q  128 atcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||    
T  15180463 atcatgatacgcgcttgtgctataagcttcaaataagttgtttatc 15180418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 31916519 - 31916462
Alignment:
Q  122 gcgcttatcatgataagcacttgtgctataagctgcaaat-aagttgtttatccaaac 178  Q
    |||||||||||||||||| ||| ||| ||||||||||||| ||||||||||| |||||    
T  31916519 gcgcttatcatgataagcgcttatgccataagctgcaaatgaagttgtttattcaaac 31916462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 38353291 - 38353242
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgca 158  Q
    |||||||||| ||||| ||||||||||||||||||||  |||||||||||    
T  38353291 agcttatacataagcgattatcatgataagcacttgtaatataagctgca 38353242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 28385301 - 28385187
Alignment:
Q  63 aaaataatttaactttattttatcttttgttattaaaaat---ttaaata-gcttatacacaagcgcttatcatgataagcacttgtgctataagctgca 158  Q
    |||| |||||||| ||||||| ||||||||||| ||||||   ||| | | |||||| || |||| ||||| || |||| ||||||| | |||||||| |    
T  28385301 aaaagaatttaacgttattttgtcttttgttataaaaaataatttatacaagcttatgcataagcacttataattataaacacttgttcaataagctgta 28385202  T
Q  159 aataagttgtttatc 173  Q
    |||||||||||||||    
T  28385201 aataagttgtttatc 28385187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 34173172 - 34173216
Alignment:
Q  53 agcttatacgaaaataatttaactt-tattttatcttttgttatt 96  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  34173172 agcttatacgaaaataatttaacttctattttaccttttgttatt 34173216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 10114445 - 10114394
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctg 156  Q
    |||||||||||||| |||| |||||||| |||| ||||| ||||||||||||    
T  10114445 aaatagcttatacataagcacttatcatcataaccacttatgctataagctg 10114394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 10120711 - 10120648
Alignment:
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtt 169  Q
    ||||||||||| | |||| |||||||||| || | ||| |||||||||||||||||||| ||||    
T  10120711 aatagcttatagataagcacttatcatgagaaacgcttatgctataagctgcaaataagctgtt 10120648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 10628220 - 10628267
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||| ||||||||||||| || ||||||||||||||||||| ||||||    
T  10628220 ttattatgataagcacttatgttataagctgcaaataagttttttatc 10628267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 18133591 - 18133556
Alignment:
Q  145 tgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| |||||||||||||||||||||||||||||||    
T  18133591 tgctgtaagctgcaaataagttgtttatccaaacag 18133556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 179
Target Start/End: Complemental strand, 27752464 - 27752433
Alignment:
Q  148 tataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||||||||||||||||||||||    
T  27752464 tataagctgcaaataagttgtttatccaaaca 27752433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 29417818 - 29417892
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgc-aaataagttgtttatccaaaca 179  Q
    |||||||||||||| |||| |||||||| |||||  ||||||||| ||||||| ||||||  ||||||||||||||    
T  29417818 aaatagcttatacaaaagcacttatcat-ataagtgcttgtgctaaaagctgcaaaataacatgtttatccaaaca 29417892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 38602277 - 38602238
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaacagt 181  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  38602277 ttgtgttataagctgcaaataagatgtttatccaaacagt 38602238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 3537101 - 3537139
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttg 91  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  3537101 agcttatacgaaaacaatttgactttattttatcttttg 3537139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 4558794 - 4558756
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  4558794 tatatgaaaataatttaactttattttatcttttattat 4558756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 8407359 - 8407293
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||  |||||| |||||||||||    ||||||| ||||||| ||||||||||||||||||||    
T  8407359 cttatacgtaagcgcatatcatgataattgtttgtgctttaagctgaaaataagttgtttatccaaa 8407293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 11000631 - 11000673
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||    
T  11000631 agcttattcgaaaacaatttgactttattttatcttttgttat 11000673  T

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Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 18930636 - 18930602
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaa 176  Q
    |||||||||||||||||||||||||| ||||||||    
T  18930636 ttgtgctataagctgcaaataagttgcttatccaa 18930602  T

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Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29169030 - 29169076
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| |||||||||||||||||| ||||| | |||||||||||||    
T  29169030 ataagcgcttgtgctataagctgcagataagctctttatccaaacag 29169076  T

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Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 31716361 - 31716419
Alignment:
Q  122 gcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||    ||||||| || |||||||||||||||||||||| |||||    
T  31716361 gcgcttatcatgataactgtttgtgctttaggctgcaaataagttgtttatcctaacag 31716419  T

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Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 44426531 - 44426577
Alignment:
Q  134 ataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    |||||||||| |||||||||||||||| ||||||||||| |||||||    
T  44426531 ataagcacttatgctataagctgcaaattaagttgtttacccaaaca 44426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 180
Target Start/End: Complemental strand, 22790543 - 22790510
Alignment:
Q  147 ctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| |||||||||||||||||||||||    
T  22790543 ctataagctgtaaataagttgtttatccaaacag 22790510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 24558853 - 24558812
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtta 94  Q
    |||||||||||||||||||||||||   ||||||||||||||    
T  24558853 agcttatacgaaaataatttaacttcggtttatcttttgtta 24558812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 29168181 - 29168250
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    |||||||||| |||| ||| | ||||||| | |||||||||||||||||| ||||  ||| |||||||||    
T  29168181 agcttatacataagcacttttgatgataaacgcttgtgctataagctgcagataacctgtgtatccaaac 29168250  T

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Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 31714409 - 31714356
Alignment:
Q  132 tgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||| | ||||||||||||||| |||| | || |||||||||||||||    
T  31714409 tgataagcacgtatgctataagctgcaattaagattttaatccaaacagtgcct 31714356  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 40357890 - 40357857
Alignment:
Q  62 gaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||| ||||||||||||||||||||||    
T  40357890 gaaaataattttactttattttatcttttgttat 40357857  T

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Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 1113029 - 1112969
Alignment:
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagtt 166  Q
    ||||||||||||| ||   |||| |||||||||| |||||||||| || ||||||||||||    
T  1113029 aatagcttatacagaaaaacttaccatgataagcgcttgtgctatgagttgcaaataagtt 1112969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 7026729 - 7026689
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| ||||| ||||| ||||||||||||||||||||||    
T  7026729 cttatatgaaaacaattttactttattttatcttttgttat 7026689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 12497403 - 12497435
Alignment:
Q  147 ctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||||||||||| ||||||||    
T  12497403 ctataagctgcaaataagttgtttgtccaaaca 12497435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 25097367 - 25097295
Alignment:
Q  107 atagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||| ||||| |||||||||||||||||||  ||  |||||||| ||  || |||||| ||||||||||||    
T  25097367 atagctaatacataagcgcttatcatgataagatctcttgctataaacttaaactaagttatttatccaaaca 25097295  T

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Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 25930702 - 25930738
Alignment:
Q  143 tgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  25930702 tgtgctataagcttcaaataagttctttatccaaaca 25930738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 29262943 - 29262979
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatctt 88  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  29262943 cagcttatatgaaaataatttgactttattttatctt 29262979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 35374443 - 35374479
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttt 89  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  35374443 agcttatatgaaaacaatttaactttattttatcttt 35374479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 38189195 - 38189239
Alignment:
Q  136 aagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  38189195 aagcacttgtgctataagttgcaaattaagttgtttatcccaaca 38189239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 38648278 - 38648214
Alignment:
Q  113 tatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||| ||||| |||||| || |||||| ||  ||||||||||||||||||||| ||| |||||||    
T  38648278 tatatacaagtgcttataataataagcgctaatgctataagctgcaaataagtagttaatccaaa 38648214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 43045852 - 43045896
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    ||||| |||||||||||||||| ||| |||| |||||||||||||    
T  43045852 ataagtacttgtgctataagctacaagtaaggtgtttatccaaac 43045896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 43730732 - 43730664
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttat 172  Q
    |||||||||||||| |||  ||||||||||||| |  || ||||| |||||||||| ||||||||||||    
T  43730732 aaatagcttatacataagtacttatcatgataaacttttatgctaaaagctgcaaattaagttgtttat 43730664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 9e-26; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 9202771 - 9202943
Alignment:
Q  9 agcttattttcataagttcattgagatagcttacgaaaacaggca---gcttatacgaaaataatttaactttattttatcttttgttattaaaaattta 105  Q
    ||||||||||||||||||| |  ||||| |||| ||||||||      ||||||| ||||| |||||||||||||||||||||||| ||   |||         
T  9202771 agcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaa----- 9202865  T
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
      ||||||||| | |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  9202866 --tagcttatatataagcacttatcatgataaacacttgtgctataagctgcaaataagatgtttatccaaacagggcct 9202943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 39105515 - 39105356
Alignment:
Q  5 ttttagcttattttcataagttcattgagatagcttacgaaaacaggc---agcttatacgaaaataatttaactttattttatcttttgttattaaaaa 101  Q
    |||||||||||||||||||||||    |||||||||| ||||||||     |||||||||||||| |||||||||| |||| || ||| | |||  |||     
T  39105515 ttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaacttcatttcatatttagctatagaaa- 39105417  T
Q  102 tttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgt 168  Q
          ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39105416 ------tagcttatacataagcgcttatcatgataagcacttatgctataagctgcaaataagttgt 39105356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 28776930 - 28776850
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||||||| |||| ||||||||||||||  |||  ||||||||||||||||||||||||||||||||||| ||||    
T  28776930 aaatagcttatacataagcacttatcatgataagtgcttaggctataagctgcaaataagttgtttatccaaacagagcct 28776850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 3735620 - 3735691
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| || |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  3735620 agcttatccataagcgcttatcatgataatctcttgtgctataagctgcaaataggttgtttatccaaacag 3735691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 19460501 - 19460572
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaa 176  Q
    |||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  19460501 aaatagtttatacataagtgcttatcatgataagcatttgtgctataagctgcaaataagctgtttatccaa 19460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 12425571 - 12425462
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    |||||||||||||| |||||||||||||||||||||||  |||        ||||||| ||||||| ||||| |||||||||||| ||||||| ||||||    
T  12425571 agcttatacgaaaacaatttaactttattttatcttttactata-------taaatagtttatacataagcgtttatcatgataaacacttgtactataa 12425479  T
Q  153 gctgcaaataagttgtt 169  Q
    |||||||||||| ||||    
T  12425478 gctgcaaataagatgtt 12425462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 32372561 - 32372495
Alignment:
Q  113 tatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||| ||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  32372561 tatacataagggcttatcatgataagtgcttgtgctataagctgcaaataagttgtttatccaaaca 32372495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 24030531 - 24030601
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||  || ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  24030531 agcttatacacgcgcacttatcatgataagtgcttgtgctataagctgcaaataagctgtttatccaaaca 24030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 7706126 - 7706179
Alignment:
Q  127 tatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7706126 tatcatgataagcacttgtgctataacctgcaaataagttgtttatacaaacag 7706179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 40426688 - 40426631
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagt 181  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  40426688 gcttatcatgataagtgcttgtgctataagctgcaaatgagttgtttatccaaacagt 40426631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 1465134 - 1465206
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||| |||| |||||  ||||||||||||    
T  1465134 aaatagcttatacataagcgcttatcttgataagcacttatgctataaactgcgaataatctgtttatccaaa 1465206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 32703563 - 32703643
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||  ||| ||||||||||||||||||   |||||||||||||||||||||||||||||| || |||||| ||||    
T  32703563 aaatagctttaacataagcgcttatcatgataaatgcttgtgctataagctgcaaataagttgtttttctaaacagggcct 32703643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 42573894 - 42573970
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaacag 180  Q
    |||||||||||||| |||||||||||||||||||| ||   ||||||||||||||| |||| |||||||||||||||    
T  42573894 aaatagcttatacataagcgcttatcatgataagcgctcaggctataagctgcaaattaagctgtttatccaaacag 42573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 7984930 - 7984868
Alignment:
Q  108 tagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgttt 170  Q
    ||||||| ||| |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  7984930 tagcttaaacataagcgcttatcatgataagcgcatgtactataagctgcaaataagttgttt 7984868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 16938001 - 16938067
Alignment:
Q  114 atacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||| ||| |||||||||||||| |||||||| |||||||| |||||||||||||| |||||||||    
T  16938001 atacataagtgcttatcatgataaacacttgtgttataagcttcaaataagttgtttgtccaaacag 16938067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 7319140 - 7319209
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    ||||||| || ||| |||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||    
T  7319140 agcttatgcataagtgcttatcatgataagcgcttgtgctataagctgtaaataagctgtttattcaaac 7319209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 42646596 - 42646548
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgc 157  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42646596 agcttatatataagcgcttatcatgataagcacttgtgctataagctgc 42646548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 5559685 - 5559610
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    ||||| || |||||||||||||||||||||||| || || |  ||||||||||||| |||||||||||||||||||    
T  5559685 aaataactcatacacaagcgcttatcatgataaacatttattatataagctgcaaattaagttgtttatccaaaca 5559610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 10771993 - 10772068
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    |||||||||||||| | | | |||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||    
T  10771993 aaatagcttatacatatgtgtttatcatgataagcacttatgctataagctgcaaattaagttgtatattcaaaca 10772068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 39248055 - 39247984
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctat-aagctgcaaataagttgtttatcca 175  Q
    ||||||||| |||| ||||||||||||| ||||||| || |||||| |||||||||||||| ||||||||||    
T  39248055 aaatagcttttacataagcgcttatcatcataagcaattatgctataaagctgcaaataagctgtttatcca 39247984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 12554388 - 12554334
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||| ||||||  ||||||| ||||||||||||||||||||||||||||||    
T  12554388 cttatcataataagcgtttgtgctttaagctgcaaataagttgtttatccaaaca 12554334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 31051822 - 31051768
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||||||||||||||||||| ||||| | |||||| |||||||    
T  31051822 ttatcatgataagcacttgtgctataagctgcgaataaatggtttattcaaacag 31051768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 3520355 - 3520302
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||||||||    
T  3520355 ttatcatgacaagtgcttgtgctataagctgaaaataagttgtttatccaaaca 3520302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 12433521 - 12433570
Alignment:
Q  131 atgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| | |||||| |||||||||||||||||||||||||||||||||    
T  12433521 atgataaacgcttgtgttataagctgcaaataagttgtttatccaaacag 12433570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 42100259 - 42100194
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    ||||| |||| || |||||| |||||| ||||||||||||||||||| ||||||||||||| ||||    
T  42100259 aagcgtttattattataagcgcttgtgatataagctgcaaataagttatttatccaaacagggcct 42100194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 6096498 - 6096427
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||| ||| |||||||||||||||  |||   |||| ||||||||||||||||||||| ||||||    
T  6096498 aaatagcttatacataagtgcttatcatgataagagctt---ctatgagctgcaaataagttgtttatacaaaca 6096427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 8089739 - 8089679
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    |||||||||||||||||| ||||| |||||| |||| |||| |||||||||||||||||||    
T  8089739 aagcgcttatcatgataaacacttatgctatgagctacaaattaagttgtttatccaaaca 8089679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 13697904 - 13697960
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagt 181  Q
    |||||||||||||   ||| || ||||||||||||||||||||||||||||||||||    
T  13697904 cttatcatgataaatgcttatgttataagctgcaaataagttgtttatccaaacagt 13697960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 34736641 - 34736713
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||||||||| || ||| | |||||||| ||||   ||||||||||||||||| ||||||||||||||||||    
T  34736641 aaatagcttatgcataagtgattatcatggtaagtgtttgtgctataagctgcagataagttgtttatccaaa 34736713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 465955 - 465841
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctata 151  Q
    |||||||||| |||| |||||||||||||||||||||||||        ||  |||||||||||| | ||| ||||||||||| | |  ||| || ||||    
T  465955 cagcttatacaaaaacaatttaactttattttatcttttgt-------catagaaatagcttatatataagtgcttatcatgaaatgagcttatgttata 465863  T
Q  152 agctgcaaataagttgtttatc 173  Q
    | ||||||||||||||||||||    
T  465862 aactgcaaataagttgtttatc 465841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 3569097 - 3569132
Alignment:
Q  128 atcatgataagcacttgtgctataagctgcaaataa 163  Q
    ||||||||||||||||||||||||||||||||||||    
T  3569097 atcatgataagcacttgtgctataagctgcaaataa 3569132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 32941411 - 32941341
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||  |||||||||||||| ||||  ||| ||||||||||||| |||||| |||||||||||||||    
T  32941411 agcttatacgtaagcgcttatcatggtaagtgctt-tgctataagctgctaataagctgtttatccaaacag 32941341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 8158371 - 8158409
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttg 91  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  8158371 agcttatatgaaaataatttaactttattttatcttttg 8158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 26005367 - 26005437
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| ||||  ||||||| |||||   |||||||||||||| | |||||||||||||||||||||    
T  26005367 agcttatacataagcaattatcataataagtgtttgtgctataagcttctaataagttgtttatccaaaca 26005437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 40848712 - 40848638
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||| ||||||| ||| ||||||||| | |||||||||| ||||||| ||||||| |  ||||||||||||||    
T  40848712 aaatagtttatacataagtgcttatcattaaaagcacttgtactataagatgcaaattaactgtttatccaaaca 40848638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 42582867 - 42582813
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaa 159  Q
    |||||||||||||| |||||||||| ||||||| | ||| |||||||||||||||    
T  42582867 aaatagcttatacataagcgcttattatgataaacgcttatgctataagctgcaa 42582813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 2568658 - 2568534
Alignment:
Q  53 agcttatacgaaaat-aatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctata 151  Q
    ||||||||||||||  ||||||||||| |||||| | |||||||  |||   |  |||||| ||||| |||| |||||||||||||| ||||  ||||||    
T  2568658 agcttatacgaaaaacaatttaactttgttttatatcttgttatagaaatagtttatagct-atacataagcacttatcatgataagtacttaagctata 2568560  T
Q  152 agctgc-aaataagttgtttatccaa 176  Q
    |||||| || ||||||||||||||||    
T  2568559 agctgctaactaagttgtttatccaa 2568534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 180
Target Start/End: Complemental strand, 6593288 - 6593179
Alignment:
Q  65 aataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taa 163  Q
    |||||||||||||||||||||||||||||| || |||||      | ||||||| |||||| ||||| |||||    || |||||||||||| ||| |||    
T  6593288 aataatttaactttattttatcttttgtta-tagaaatt------gtttatacataagcgcgtatcaagataaatgattatgctataagctgtaaattaa 6593196  T
Q  164 gttgtttatccaaacag 180  Q
    |||||||||||||||||    
T  6593195 gttgtttatccaaacag 6593179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 30291216 - 30291135
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaacagtgcct 185  Q
    |||||| |||| || ||||| |||||||||||||   || |||||||||||||||| ||||||| |||||||||||| ||||    
T  30291216 aaataggttatgcataagcgtttatcatgataagtgtttatgctataagctgcaaattaagttggttatccaaacagagcct 30291135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 34669871 - 34669916
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtt 169  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||    
T  34669871 gcttatcatgataagaacttgtgctataagcttgaaataagttgtt 34669916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 39477884 - 39477831
Alignment:
Q  127 tatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||| ||||| |||||||||||||||||| || |||||| |||||    
T  39477884 tatcatgataagcgcttgtcctataagctgcaaataagctgcttatcccaacag 39477831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 10502553 - 10502601
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||||||||||||| ||| ||| ||||||||||||||||||| ||||||    
T  10502553 cttatcatgataagaactcgtgttataagctgcaaataagttatttatc 10502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 10639892 - 10639825
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||| ||| ||||||| |||||| ||||| |||| |||| |||||||||| ||||||||||||||    
T  10639892 cttatacataagtgcttatcgtgataaccacttttgct-taagttgcaaataagctgtttatccaaaca 10639825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 11615509 - 11615461
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||| ||||    
T  11615509 cagcttatacgtaaacaatttgactttattttatcttttgttataaaaa 11615461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 11835270 - 11835230
Alignment:
Q  60 acgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  11835270 acgaaaacaatttaactttattttatcttttgttataaaaa 11835230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 14675015 - 14675091
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaacag 180  Q
    ||||||||| |||| |||| |||||||||||||  | || ||| |||||||||||| |||||||||| |||||||||    
T  14675015 aaatagcttctacataagcacttatcatgataactatttatgccataagctgcaaattaagttgtttgtccaaacag 14675091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 20982250 - 20982325
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat-aagttgtttatccaaacag 180  Q
    |||||||||||||| |||| ||||| ||||||||||||| ||||||||||    ||| |||||||||||||||||||    
T  20982250 aaatagcttatacataagcacttat-atgataagcacttatgctataagcacttaatgaagttgtttatccaaacag 20982325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 32009622 - 32009578
Alignment:
Q  136 aagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||    
T  32009622 aagcgcttgtgctataagatgcaaataagttgtttatcaaaacag 32009578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 40048356 - 40048392
Alignment:
Q  59 tacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||||||| ||||||||||||||||||||||||    
T  40048356 tacgaaaataatataactttattttatcttttgttat 40048392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 12595813 - 12595852
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  12595813 ttatatgaaaacaatttaactttattttatcttttgttat 12595852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 25461900 - 25461955
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||| |||||| |||||||| |||||||  || ||||||||||||    
T  25461900 cttatcatgataagcgcttgtgttataagctacaaataacctgcttatccaaacag 25461955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 30585502 - 30585541
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  30585502 ttataccaaaacaatttaactttattttatcttttgttat 30585541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 42228070 - 42228031
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  42228070 cttgtgctataagcttcaaatatgttgtttatccaaacag 42228031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 42500370 - 42500409
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  42500370 cttgtgctataagctggaaataagctgtttatccaaacag 42500409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 7853658 - 7853616
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||    
T  7853658 agctaatacggaaacaatttaactttattttatcttttgttat 7853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Complemental strand, 19460110 - 19460080
Alignment:
Q  65 aataatttaactttattttatcttttgttat 95  Q
    |||||||||||||||||||||||||||||||    
T  19460110 aataatttaactttattttatcttttgttat 19460080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 25461033 - 25460963
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||| | |||| ||||||||||||||  ||| |||||||||||  | ||||| ||||||||||||||    
T  25461033 agcttatatataagctcttatcatgataagtgcttatgctataagctaaatataagctgtttatccaaaca 25460963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 29117000 - 29117042
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||||||||| | ||| ||||||||||||||||||||||    
T  29117000 agcttatacgaaaacagtttgactttattttatcttttgttat 29117042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 29529864 - 29529810
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| ||||||||| |||||||||||||| || ||||||  ||||||||||||||    
T  29529864 ttatgatgataagcgcttgtgctataagccgcgaataagacgtttatccaaacag 29529810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 32969187 - 32969229
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||  |||||||||| ||||||||||||||||||||||    
T  32969187 agcttatataaaaataatttgactttattttatcttttgttat 32969229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 35135732 - 35135774
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||    
T  35135732 agcttatatgaaaatagtttgactttattttatcttttgttat 35135774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 40439084 - 40439153
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||  || || ||||| ||||||| |||||| |||||| |||||||||| ||||||||||||||    
T  40439084 agcttatacatgagtgcctatcaagataagcgcttgtg-tataaggtgcaaataagctgtttatccaaaca 40439153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 95
Target Start/End: Original strand, 4948617 - 4948646
Alignment:
Q  66 ataatttaactttattttatcttttgttat 95  Q
    ||||||||||||||||||||||||||||||    
T  4948617 ataatttaactttattttatcttttgttat 4948646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 8334576 - 8334535
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttatt 96  Q
    |||||||||||||||||||| ||||||||||| ||| |||||    
T  8334576 cttatacgaaaataatttaaatttattttatcattttttatt 8334535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 10363741 - 10363708
Alignment:
Q  62 gaaaataatttaactttattttatcttttgttat 95  Q
    ||||| ||||||||||||||||||||||||||||    
T  10363741 gaaaacaatttaactttattttatcttttgttat 10363708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 27298024 - 27297955
Alignment:
Q  108 tagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||| |||| |||| ||||||||||||| | ||||| |||||| ||||||| | ||||||||| ||||    
T  27298024 tagcttgtacataagcacttatcatgataaacgcttgttctataaactgcaaaaatgttgtttattcaaa 27297955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 34590362 - 34590419
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgc-aaataagttgtttatccaaacag 180  Q
    ||||||||||||||  |||| | ||||||||||| |||||||| ||||||||||||||    
T  34590362 gcttatcatgataaatacttatcctataagctgcaaaataagtcgtttatccaaacag 34590419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 34907918 - 34907983
Alignment:
Q  113 tatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    ||||||||| |  ||||||||||||  |||||||||||||  | ||||||||||||| ||||||||    
T  34907918 tatacacaaacctttatcatgataaagacttgtgctataatttacaaataagttgttaatccaaac 34907983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 37063141 - 37063186
Alignment:
Q  50 ggcagcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||| |||||| ||||||| ||| ||||||||||||||||||||||    
T  37063141 ggcaacttatatgaaaatagtttgactttattttatcttttgttat 37063186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 37954624 - 37954583
Alignment:
Q  139 cacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| ||||||||||||||||||| | |||||||||||||    
T  37954624 cacttgagctataagctgcaaataagctatttatccaaacag 37954583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 38047929 - 38047966
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgtta 94  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  38047929 tatatgaaaataatttgactttattttatcttttgtta 38047966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 1619047 - 1618991
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat 161  Q
    |||||||||||||| ||| ||||||||| | |||| ||| |||||||||| ||||||    
T  1619047 aaatagcttatacaaaagtgcttatcatcaaaagcgcttatgctataagcagcaaat 1618991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 3566388 - 3566424
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttt 89  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  3566388 agcttatacaaaaataatttaactttattttctcttt 3566424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 24029994 - 24029938
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||| ||||||| || || ||||||||  ||||||| |||||||||||||||    
T  24029994 gcttatcataataagcatttttgttataagctctaaataagctgtttatccaaacag 24029938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 26516253 - 26516180
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgc--aaataagttgtttatccaaac 178  Q
    |||||||||||||| |||| ||||| ||||||||| ||| |||||||||| ||  || ||||||||||||||||||    
T  26516253 aaatagcttatacataagcacttat-atgataagcgcttatgctataagc-gcttaattaagttgtttatccaaac 26516180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 36797205 - 36797273
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||| ||||  |||| ||||||||  ||||||||||||| |||||||||  |||||| |||||    
T  36797205 agcttatacataagcagttataatgataagtgcttgtgctataagttgcaaataaactgtttacccaaa 36797273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 38104979 - 38105054
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaacag 180  Q
    ||||||||||| || || ||||||| || |||| | |||  ||||||||||||||| ||||||||||||||||||||    
T  38104979 aaatagcttattcataaccgcttat-atcataaacgcttacgctataagctgcaaaataagttgtttatccaaacag 38105054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 40731218 - 40731174
Alignment:
Q  136 aagcacttgtgctataagctgc-aaataagttgtttatccaaaca 179  Q
    |||||||| ||||||||||||| |||||| |||||||||||||||    
T  40731218 aagcacttatgctataagctgcaaaataatttgtttatccaaaca 40731174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 42583147 - 42583107
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||| ||||||| ||||||||||||||| ||||||||||||    
T  42583147 cttacacgaaaacaatttaactttatttcatcttttgttat 42583107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 39659639 - 39659708
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  39659639 cttatacataagcgcttatcatgataagcatttgtgctctaagctgcaaataagttgtttatccaaacag 39659708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 41407242 - 41407171
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  41407242 agcttatacataagtgcttatcatgataagcgcttgtgctataagctgcaaacaagctgtttatccaaacag 41407171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 2416268 - 2416194
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| |||||||| |||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  2416268 aaataacttatacataagcacttaacatgataagaacttgtgctataagctgaaaataagttgtttatccaaaca 2416194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 36534736 - 36534663
Alignment:
Q  112 ttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||||| ||||||||||||||||||| || ||||| ||| ||||||||||||||||||||||| ||||    
T  36534736 ttatacacaagcacttatcatgataagcacttatgttataaactgaaaataagttgtttatccaaacagagcct 36534663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 1633691 - 1633746
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  1633691 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacag 1633746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 40682488 - 40682563
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| ||||||||| |||||||||| |||| ||||| || |||||||||| |||||||||||||||    
T  40682488 aaatagcttatacataagcgcttaccatgataagcgcttgcgctatgagttgcaaataagatgtttatccaaacag 40682563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 15757809 - 15757866
Alignment:
Q  123 cgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  15757809 cgcttatcatgataagcgcttgtgctataagctgaaaataagctgtttatccaaacag 15757866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 43570358 - 43570297
Alignment:
Q  118 acaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||    
T  43570358 acaagcgcttatcatgataagtgcttgtgctataagctgcaaataagctgtttacccaaaca 43570297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 38010335 - 38010283
Alignment:
Q  127 tatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  38010335 tatcatgataagcacttgtgatataagctgcaaataagttgtttatctaaaca 38010283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 26143756 - 26143830
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||||| ||| |||||| ||||  |||||| ||||| |||||||||||||||||||||||||||    
T  26143756 aaatagcttatacacaagtgct-atcatggtaagtgcttgtgttataaactgcaaataagttgtttatccaaacag 26143830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 4606911 - 4606861
Alignment:
Q  130 catgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  4606911 catgataagcacttgtgttataagctgcgaataagttgtttatccaaacag 4606861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 41293360 - 41293433
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgc--aaataagttgtttatccaaacag 180  Q
    |||||| ||| | ||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  41293360 agcttacacatacgcgcttaccatgatacgcacttgtgctataagctgcaaaaataagttgtttatccaaacag 41293433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 32592528 - 32592463
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatcc 174  Q
    |||||||||| |||||||||| ||||||||   |||||||||||||| ||||||||||||||||||    
T  32592528 agcttatacataagcgcttataatgataagtgtttgtgctataagctacaaataagttgtttatcc 32592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 41851476 - 41851408
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||| | ||||| ||| |||||||||| ||||||||||| |||||||||||| ||||||||||||    
T  41851476 agcttatatataagcgtttagcatgataagcgcttgtgctatatgctgcaaataagatgtttatccaaa 41851408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 5599180 - 5599243
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    ||||||| | ||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  5599180 gcttataaataagtgcttattatgataagcacttatgctataagctgcaaataagttttttatc 5599243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 19608740 - 19608815
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| ||| |||||||||| || |  |||||||||||||||||||||| | ||| |||||||||||    
T  19608740 aaatagcttatacataagtgcttatcatggtatgtgcttgtgctataagctgcaaatatgctgtatatccaaacag 19608815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 26626810 - 26626759
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  26626810 ttatcatgataagagcttatgctataagctgcaaataagttgtttatccaaa 26626759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 41880642 - 41880693
Alignment:
Q  130 catgataagcacttgtgctataagctgcaaa-taagttgtttatccaaacag 180  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  41880642 catgataagcgcttgtgctataagctgcaaagtaagttgtttatccaaacag 41880693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 42659280 - 42659351
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| |||||||||||||||||||    |||||||| |||||||||||||||  ||||||||||||    
T  42659280 agcttatacataagcgcttatcatgataagtgtgtgtgctattagctgcaaataagtttcttatccaaacag 42659351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 2142607 - 2142561
Alignment:
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  2142607 aatagcttatacacaagcgcttatcatgataagttcttgtgctataa 2142561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 3311984 - 3311922
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttat 172  Q
    ||||||||| |||| ||| ||||||||| |||||||||||||||||| |||||| ||||||||    
T  3311984 gcttatacataagcacttttcatgataatcacttgtgctataagctgaaaataatttgtttat 3311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 12795718 - 12795664
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    |||||||||||||||||||| |||||||| ||||||||||  |||||||||||||    
T  12795718 gcttatcatgataagcacttatgctataaactgcaaataaactgtttatccaaac 12795664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 41812228 - 41812274
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||    
T  41812228 ataatcacttgtgctataaactgcaaataagttgtttatccaaacag 41812274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 27695731 - 27695784
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||||   |||||||||||||| |||||||||||||||||||||    
T  27695731 gcttatcatgataagtgtttgtgctataagctacaaataagttgtttatccaaa 27695784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 178
Target Start/End: Complemental strand, 39567888 - 39567784
Alignment:
Q  68 aatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctg-caaataagtt 166  Q
    ||||||||||||||||||||||||||||  |||       || |||||||||||| |||||||||||||||| ||| ||| ||||||||  || |||| |    
T  39567888 aatttaactttattttatcttttgttatagaaa-------tatcttatacacaagtgcttatcatgataagcgcttatgcaataagctgtgaattaagct 39567796  T
Q  167 gtttatccaaac 178  Q
    ||||||||||||    
T  39567795 gtttatccaaac 39567784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 8017477 - 8017314
Alignment:
Q  13 tattttcataagttcattgagatagcttacgaaaacagg---cagcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaata 109  Q
    |||||||||||||||    |||||||||| ||||||||    ||||||||| ||||||||||||||||| ||||||| |||||        ||  |||||    
T  8017477 tattttcataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataatttaactttgttttatcctttgt--------atagaaata 8017386  T
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgca-aataagttgtttatccaaacag 180  Q
    ||| ||||| |||||  ||||||||||| ||||| |||| ||||||| | ||||||||||| ||||| ||||    
T  8017385 gctgatacataagcgtgtatcatgataaacacttatgctttaagctgaacaataagttgttaatccagacag 8017314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 36114419 - 36114316
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    |||| |||| |||| ||||||||||||||||||||||||| || ||||       ||||| ||| | |||| ||||||||||||| ||| ||| ||||||    
T  36114419 agctaatacaaaaacaatttaactttattttatcttttgtcataaaaa-------tagctaatatataagcacttatcatgataaacacgtgtactataa 36114327  T
Q  153 gctgcaaataa 163  Q
    |||||||||||    
T  36114326 gctgcaaataa 36114316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 40279122 - 40279082
Alignment:
Q  139 cacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  40279122 cacttgtgctataagctacaaataagttgtttatccaaaca 40279082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 40835471 - 40835435
Alignment:
Q  143 tgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||||||||||||||||||||||||    
T  40835471 tgtgctataagctgcaaataagttgtttatccaaaca 40835435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 42457903 - 42457823
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||| ||||||| ||  ||||||||||||| || ||||||||||||||  ||||||||| ||| |||||||||| ||||    
T  42457903 aaatagattatacataaatgcttatcatgataggcgcttgtgctataagccacaaataagtggttaatccaaacagggcct 42457823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 43199414 - 43199374
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  43199414 agcttatacgaagataatttaactttattttatcttttgtt 43199374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 7043837 - 7043912
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||| |||||||| ||||| ||||  |||||| ||  | || |||||||||||||||||||||||||||||||||    
T  7043837 aaataacttatacataagcgtttattgtgataaacatctatgttataagctgcaaataagttgtttatccaaacag 7043912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 10619346 - 10619401
Alignment:
Q  121 agcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaa 176  Q
    ||||||||||||||||||||||| | |||||| || |||||||| |||||||||||    
T  10619346 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 10619401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 11863872 - 11863801
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| || ||||||||||||||| |||   ||||||| ||||||| |||||||||||||||||| ||||    
T  11863872 agcttatgcataagcgcttatcatgacaagtgtttgtgctgtaagctgaaaataagttgtttatccagacag 11863801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 12194869 - 12194822
Alignment:
Q  133 gataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  12194869 gataagcacttgtgctataagctataaataagttgtttaaccaaacag 12194822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 27317261 - 27317304
Alignment:
Q  130 catgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    ||||||||||  ||||||||||||||||||||||||||||||||    
T  27317261 catgataagcgtttgtgctataagctgcaaataagttgtttatc 27317304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 31744305 - 31744237
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| |||||||||||||  ||||  ||||||||||||||| |||||||| |||||| |||||||    
T  31744305 agcttatacataagcgcttatcat--taagtgcttgtgctataagctacaaataagctgtttaaccaaaca 31744237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 34339904 - 34339866
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34339904 cttatacgaaaataatttgactttattttatcttttgtt 34339866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 44589984 - 44589922
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||||||| |||| ||||||||||||||| ||| | ||||||||| |||||| ||||||||||    
T  44589984 cttatacataagcacttatcatgataagcgcttatactataagctccaaatatgttgtttatc 44589922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 3611181 - 3611108
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcactt-gtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||| |||||||| |||| |||||||||| || ||||| ||||||||||||| |||| ||||||| |||||||    
T  3611181 aaataacttatacataagcacttatcatgacaaacacttagtgctataagctgaaaatgagttgttgatccaaa 3611108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 36114594 - 36114635
Alignment:
Q  54 gcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| |||| ||||||||||||||||||||||||||||    
T  36114594 gcttatacaaaaacaatttaactttattttatcttttgttat 36114635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 12313243 - 12313368
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    |||||| || |||||||||||||||||||||||||||||| |        | ||| || ||||||  || |||||||||||||| |  ||| | ||||||    
T  12313243 agcttaaacaaaaataatttaactttattttatcttttgtga--------taaaacagtttatacgtaaacgcttatcatgatacgtgcttatactataa 12313334  T
Q  153 gctgc-aaataagttgtttatccaaacagtgcct 185  Q
    ||||| ||||||| ||||||||||||||| ||||    
T  12313335 gctgcaaaataagatgtttatccaaacagagcct 12313368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 15305598 - 15305526
Alignment:
Q  109 agcttatacacaagcgcttatcatg-ataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||| |||| |||| |||| | ||| ||||| ||| |||||||||| |||||||||||||||    
T  15305598 agcttatacacaagcacttaccatgtataaacgcttatgctaaaagttgcaaataagctgtttatccaaacag 15305526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 9174725 - 9174694
Alignment:
Q  149 ataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||||||||||||||||||    
T  9174725 ataagctgcaaataagttgtttatccaaacag 9174694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 18962108 - 18962155
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    |||||||| ||||| | |||||||||||||||||||||||||| ||||    
T  18962108 agcttatatgaaaacagtttaactttattttatcttttgttataaaaa 18962155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 28330428 - 28330498
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| || | |||||||||||||||||  ||||||||||||| |  ||| |||||||||||||||||||    
T  28330428 agcttatgcatatgcgcttatcatgataagtgcttgtgctataag-tttaaaaaagttgtttatccaaacag 28330498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 94
Target Start/End: Complemental strand, 33857134 - 33857103
Alignment:
Q  63 aaaataatttaactttattttatcttttgtta 94  Q
    ||||||||||||||||||||||||||||||||    
T  33857134 aaaataatttaactttattttatcttttgtta 33857103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 41449839 - 41449791
Alignment:
Q  127 tatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||||||||||| | |||  ||||||||||||||||||||||||||||||    
T  41449839 tatcatgataagctcgtgt--tataagctgcaaataagttgtttatccaaa 41449791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 43036545 - 43036510
Alignment:
Q  145 tgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| |||||||||||||||||||||||||    
T  43036545 tgctataagcggcaaataagttgtttatccaaacag 43036510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 4026807 - 4026738
Alignment:
Q  63 aaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagc 139  Q
    ||||||||||||||||||||||||||||| ||| |       |||||||||||| | |||| |||||||||||||||    
T  4026807 aaaataatttaactttattttatcttttgctataa-------aaatagcttatagataagcacttatcatgataagc 4026738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 5745560 - 5745610
Alignment:
Q  130 catgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| | |||||| ||||||||||||||||| | |||||||||||||    
T  5745560 catgataaacgcttgtgatataagctgcaaataagctctttatccaaacag 5745610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 10490545 - 10490503
Alignment:
Q  118 acaagcgcttatcatgataagcacttgtgctataagctgcaaa 160  Q
    |||||||||| ||||||||||||||||| |||||| |||||||    
T  10490545 acaagcgcttgtcatgataagcacttgtactataaactgcaaa 10490503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 16451142 - 16451087
Alignment:
Q  32 agatagcttacgaaaacaggcagcttatacgaaaataatttaactttattttatcttttg 91  Q
    |||||||||||||||||||    |||||| ||||| |||||||||| |||||||||||||    
T  16451142 agatagcttacgaaaacag----cttatatgaaaacaatttaacttcattttatcttttg 16451087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 17952771 - 17952813
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||    
T  17952771 agcttatatgaaaatagtttgactttattttatcttttgttat 17952813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 25609796 - 25609754
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||||||||| || ||||||||||||||||| ||||    
T  25609796 agcttatacgaaaataaattgactttattttatcttttcttat 25609754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 28792326 - 28792400
Alignment:
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||| ||| | || | |||||| |  ||||||||||||||||||| |||| | |||||||||||||    
T  28792326 aatagcttatacataagtgattgtaatgataggtgcttgtgctataagctgcaagtaagctttttatccaaacag 28792400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 33319948 - 33319994
Alignment:
Q  115 tacacaagcgcttatcatgataagcacttgtgctataagctgcaaat 161  Q
    |||| ||||| |||||| ||||||| |||||||||||||||||||||    
T  33319948 tacataagcgattatcaggataagcgcttgtgctataagctgcaaat 33319994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 35459910 - 35459872
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttg 91  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  35459910 agcttatacgaaaacaatttgactttattttatcttttg 35459872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 170
Target Start/End: Original strand, 948428 - 948457
Alignment:
Q  141 cttgtgctataagctgcaaataagttgttt 170  Q
    ||||||||||||||||||||||||||||||    
T  948428 cttgtgctataagctgcaaataagttgttt 948457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 2227098 - 2227053
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||| |||||||||||| | ||| ||||||||||||||||||    
T  2227098 ataagcacatgtgctataagccggaaaaaagttgtttatccaaaca 2227053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 4773084 - 4773133
Alignment:
Q  128 atcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||||||||| | ||||||||||||||  ||||||||| ||||||||||    
T  4773084 atcatgataagtatttgtgctataagctctaaataagttatttatccaaa 4773133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 6988106 - 6988073
Alignment:
Q  62 gaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||| ||||||||||||||||||||||    
T  6988106 gaaaataatttgactttattttatcttttgttat 6988073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 9395064 - 9395011
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||  |||||||||||||| ||||||||| | | ||||||||||    
T  9395064 ttatcatgataagagcttgtgctataagccgcaaataagctatgtatccaaaca 9395011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 86
Target Start/End: Complemental strand, 13325566 - 13325537
Alignment:
Q  57 tatacgaaaataatttaactttattttatc 86  Q
    ||||||||||||||||||||||||||||||    
T  13325566 tatacgaaaataatttaactttattttatc 13325537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 14220960 - 14220997
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  14220960 ttgtgctataagctacaaataagctgtttatccaaaca 14220997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 16451078 - 16451021
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||| ||||||||||| ||  ||| |||| ||||||||||||||| ||||||||||||    
T  16451078 aagctcttatcatgatcagtgcttatgctgtaagctgcaaataagatgtttatccaaa 16451021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 27316980 - 27316943
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  27316980 ttgtgttataagctgcaaataagttgtctatccaaaca 27316943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 33981087 - 33981026
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||||||||  |||||||||||||||| |||| || |||||| | |||||| ||||    
T  33981087 gcttatcatgataagtgcttgtgctataagctgaaaatgaggtgtttaccgaaacagggcct 33981026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 2195890 - 2195850
Alignment:
Q  140 acttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| ||| ||||||||||||| |||||||||||||||    
T  2195890 acttgtgttatgagctgcaaataagctgtttatccaaacag 2195850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 3458658 - 3458610
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||||||| ||||| | ||| |||||||||||||||||||||| ||||    
T  3458658 cagcttatatgaaaaaagtttgactttattttatcttttgttataaaaa 3458610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 3673805 - 3673765
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| ||||| |||||||||||||||||| |||||||||    
T  3673805 cttatatgaaaacaatttaactttattttatattttgttat 3673765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 6167425 - 6167473
Alignment:
Q  133 gataagcacttgtgctataagctgcaaat-aagttgtttatccaaacag 180  Q
    ||||||||||| |||||||||| |||||| | |||||||||||||||||    
T  6167425 gataagcacttatgctataagccgcaaatcatgttgtttatccaaacag 6167473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 11513898 - 11513858
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||| ||||| ||||| ||||||||||||||||||||    
T  11513898 agcttatatgaaaacaatttgactttattttatcttttgtt 11513858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 26201969 - 26201925
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataag 153  Q
    |||||||| | ||| |||||||||||||||| |||||||||||||    
T  26201969 agcttatatataagggcttatcatgataagcgcttgtgctataag 26201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 31561893 - 31561929
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctg 156  Q
    |||||||||||||||||| | ||||||||||||||||    
T  31561893 aagcgcttatcatgataaacgcttgtgctataagctg 31561929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 36285308 - 36285252
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||| |||||  |||||| |||||||||||||||| ||||| | ||||||||    
T  36285308 gcttatcattataagtgcttgtgttataagctgcaaataaattgttgaaccaaacag 36285252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 37292417 - 37292457
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||| ||||||| ||| ||||||||||||||||||||    
T  37292417 agcttatatgaaaatagttttactttattttatcttttgtt 37292457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 41516874 - 41516906
Alignment:
Q  145 tgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||| ||||||||||||||||||||||||    
T  41516874 tgctataacctgcaaataagttgtttatccaaa 41516906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 9e-23; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 34430657 - 34430587
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  34430657 agcttatacataagcgcctatcatgataagcacttgtgctataagctgcaaataagatgtttatcgaaaca 34430587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 264371 - 264246
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    |||||| |||||||  ||||||||||||||||||||||| | ||| ||||      |||||||| | |||| ||||||||||||||||||||||||||||    
T  264371 agcttagacgaaaacgatttaactttattttatcttttgct-ttagaaat------agcttatatataagcacttatcatgataagcacttgtgctataa 264279  T
Q  153 gctgcaaataagttgtttatccaaacagtgcct 185  Q
    ||||||||| || |||| |||||||||| ||||    
T  264278 gctgcaaattagctgttaatccaaacagggcct 264246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 35069508 - 35069427
Alignment:
Q  104 taaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||||| || |||| ||||||||||||| | ||||||||||||||||||||||||||||||||| |||||| ||||    
T  35069508 taaatagcttatgcataagcacttatcatgataaacgcttgtgctataagctgcaaataagttgtttatcaaaacagggcct 35069427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 6538458 - 6538387
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||||||||||||| |||||  |||||||||||||||||||||||| | |||||||||||||    
T  6538458 agcttatacataagcgcttatcattataagtgcttgtgctataagctgcaaataagctatttatccaaacag 6538387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 9632847 - 9632776
Alignment:
Q  114 atacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    ||||||||| | |||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||    
T  9632847 atacacaagtgtttattatgataagcatttgtgctataagctgcaaataagttgtttatccaatcagagcct 9632776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 24626236 - 24626165
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||||  | ||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24626236 agcttatacataagcaatcatcatgataagcatttgtgctataagctgtaaataagttgtttatccaaacag 24626165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 23063643 - 23063718
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| ||||||| || ||||||||||||||| || |||||||||||| ||||||||||||| | ||||||||||    
T  23063643 aaataggttatacataaacgcttatcatgataatcatttgtgctataagatgcaaataagttgataatccaaacag 23063718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 10645470 - 10645516
Alignment:
Q  131 atgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  10645470 atgataagcatttgtgctataagctgcaaataagttgtttatccaaa 10645516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 14929653 - 14929604
Alignment:
Q  131 atgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  14929653 atgataagcacttgtgctataagctgcaaatgagttgtttgtccaaacag 14929604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 32014157 - 32014097
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||||||||||||| | |||||||||||||||||||  |||||||||||||    
T  32014157 aagcgcttataatgataagcactttttctataagctgcaaataagtaatttatccaaacag 32014097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 2455220 - 2455145
Alignment:
Q  105 aaatagcttatacacaa-gcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||| || |||||||| | ||| ||||||||||| ||||||||||||||| ||||| |||||||||    
T  2455220 aaatagcttatacataaagcgcttattacgatgagcacttgtgccataagctgcaaataaattgttcatccaaaca 2455145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 9559656 - 9559730
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| |||||||| ||||||||||| |||||| | |||| ||||||| ||||||||| ||||||||| ||||||    
T  9559656 aaataacttatacataagcgcttatcttgataaactcttgagctataaactgcaaataggttgtttatgcaaaca 9559730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 18076137 - 18076083
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataa 163  Q
    |||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||    
T  18076137 agcttatacataagtgcttattatgataagcgcttgtgctataagctgcaaataa 18076083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 8147698 - 8147575
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgttattaaaaat---ttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataag 153  Q
    ||||| |||| |||| ||||||||||||||||||| ||| ||||||   |||  |||||||| |  |||||||||||||||||||| ||   ||  ||||    
T  8147698 tatacaaaaacaattcaactttattttatcttttgctat-aaaaatagcttatgtagcttatgcttaagcgcttatcatgataagcgctaaggc--taag 8147602  T
Q  154 ctgcaaataagttgtttatccaaacag 180  Q
    ||||||||| |||||||||||||||||    
T  8147601 ctgcaaatatgttgtttatccaaacag 8147575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 9093579 - 9093704
Alignment:
Q  9 agcttattttcataagttcattgagatagcttacgaaaacaggc---agcttatacgaaaataatttaactttattttatcttttgttattaaaaattta 105  Q
    ||||||||||| |||||||  | ||| |||||| ||||||||     |||||||||||||| ||||||||||||||||||||||||       | ||  |    
T  9093579 agcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttg-------atataga 9093671  T
Q  106 aatagcttatacacaagcgcttatcatgataag 138  Q
    |||||||||| || |||||||||||||||||||    
T  9093672 aatagcttatccataagcgcttatcatgataag 9093704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 658580 - 658635
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| |||||||||||||| || |||||| | ||||||||||||||    
T  658580 cttatcatgataagtacttgtgctataagttgaaaataaatagtttatccaaacag 658635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 848008 - 847941
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||||||| |||||||||| |||||||   |||||  ||||||||||||| ||||||||||||||||    
T  848008 gcttatacataagcgcttattatgataactgcttgtcttataagctgcaaaaaagttgtttatccaaa 847941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 2735066 - 2735027
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  2735066 ttatacaaaaataatttaactttattttatcttttgttat 2735027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 28621180 - 28621227
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  28621180 agcttatacaaaaacaatttaactttattttatcttttgttataaaaa 28621227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 1402996 - 1402954
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  1402996 agcttatatgaaaatagtttaactttattttatcttttgttat 1402954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 24836249 - 24836311
Alignment:
Q  33 gatagcttacgaaaacaggcagcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||||||||    || ||||||||||| ||||| ||||||||||||||||||||||    
T  24836249 gatagcttacgaaaacttatagtttatacgaaaacaatttgactttattttatcttttgttat 24836311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 18610992 - 18610947
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgttta 171  Q
    |||||||||||||| ||||||||| | |||||||||||||||||||    
T  18610992 ttatcatgataagcgcttgtgctagatgctgcaaataagttgttta 18610947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 30926464 - 30926410
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||| ||||||||||||||||| |  |||||||||||| ||||||    
T  30926464 gcttatcatgataagcccttgtgctataagctgcca--aagttgtttatctaaacag 30926410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 33943200 - 33943147
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    ||||||||||||||||||| | ||| | |||||||| |||||||||||||||||    
T  33943200 aagcgcttatcatgataagtatttgcggtataagctacaaataagttgtttatc 33943147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 34430885 - 34430934
Alignment:
Q  130 catgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| |||||||||||||||||| | |||||||||| |||||||    
T  34430885 catgataagcgcttgtgctataagctgcatacaagttgtttaaccaaaca 34430934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 10749300 - 10749340
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  10749300 cttatatgaaaataatttaactttattttatcttttattat 10749340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 24982707 - 24982635
Alignment:
Q  107 atagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| |||||| ||| |||||||||| | ||| ||||| ||||||||||||   ||||||||||||||||||    
T  24982707 atagcatatacataagtgcttatcatggtgagcgcttgtactataagctgcacccaagttgtttatccaaaca 24982635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 28660833 - 28660877
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||||    
T  28660833 ttatatgaaaataatttaactttattttatctattgttataaaaa 28660877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 27595636 - 27595679
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||| ||||||||||| ||||||||||||||||| ||||    
T  27595636 cagcttatatgaaaataatttgactttattttatcttttattat 27595679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 29296365 - 29296400
Alignment:
Q  55 cttatacgaaaataatttaactttattttatctttt 90  Q
    ||||||| ||||||||||||||||||||||||||||    
T  29296365 cttatacaaaaataatttaactttattttatctttt 29296400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 29754208 - 29754279
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||  |||| |||| |||||||||    
T  29754208 agctaatacataagcgcttatcatgataagcgcttgtgctatcacctgaaacaaagtggtttttccaaacag 29754279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 31686559 - 31686634
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    |||||||||||||| |||| ||||||| ||||||| ||| |||| || |||||||| ||||||| ||||| |||||    
T  31686559 aaatagcttatacataagcacttatcacgataagcgcttatgctgtatgctgcaaattaagttgattatctaaaca 31686634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 32014178 - 32014233
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataag 164  Q
    |||||| ||||||  ||||||  |||||||||||||||||| ||||||||||||||    
T  32014178 agcttacacacaaatgcttatattgataagcacttgtgctagaagctgcaaataag 32014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 32206090 - 32206129
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgt 92  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  32206090 agcttatactaaaataatttaactttatttcatcttttgt 32206129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 507220 - 507178
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||| |||| ||| ||||||||||||||||||||||||    
T  507220 agcttatacaaaaacaatctaactttattttatcttttgttat 507178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 3785770 - 3785808
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttg 91  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  3785770 agcttatacgaaaacagtttaactttattttatcttttg 3785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 7714025 - 7713983
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||    
T  7714025 agcttatatgaaaacaatttgactttattttatcttttgttat 7713983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 9604779 - 9604741
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  9604779 cttgtgctataaactgcaaataagctgtttatccaaaca 9604741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 11340699 - 11340737
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  11340699 tatatgaaaataaattaactttattttatcttttgttat 11340737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 20671935 - 20671973
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttg 91  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  20671935 agcttatacgaaaacaatttgactttattttatcttttg 20671973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 26550332 - 26550405
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctg-caaataagttgtttatccaaacagt 181  Q
    |||||||||| ||| ||||||||| | |||   |||||||||||||||  ||||| ||||||||||||||||||    
T  26550332 agcttatacataagtgcttatcattagaagttattgtgctataagctgtaaaatatgttgtttatccaaacagt 26550405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 34910509 - 34910585
Alignment:
Q  102 tttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||| |||||||||||| |||| ||||||||||| || |  ||| | ||||||||||||||||||  |||||||||||    
T  34910509 tttatatagcttatacataagcacttatcatgatgag-atgtgtccaataagctgcaaataagtttattatccaaaca 34910585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 2027479 - 2027523
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||| ||||||| ||| |||||||||||||||||||||| ||||    
T  2027479 ttatatgaaaatagtttgactttattttatcttttgttataaaaa 2027523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 4029581 - 4029613
Alignment:
Q  68 aatttaactttattttatcttttgttattaaaa 100  Q
    |||||||||||||||||||||||||||| ||||    
T  4029581 aatttaactttattttatcttttgttataaaaa 4029613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 8365113 - 8365157
Alignment:
Q  129 tcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    ||||||||||| ||| ||||||||||||| |||||| ||||||||    
T  8365113 tcatgataagcgcttatgctataagctgcgaataagctgtttatc 8365157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 90
Target Start/End: Original strand, 11363447 - 11363475
Alignment:
Q  62 gaaaataatttaactttattttatctttt 90  Q
    |||||||||||||||||||||||||||||    
T  11363447 gaaaataatttaactttattttatctttt 11363475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 13907523 - 13907491
Alignment:
Q  147 ctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||||| ||||||||||||||    
T  13907523 ctataagctgcaaataagctgtttatccaaaca 13907491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 27693508 - 27693544
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatctt 88  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  27693508 cagcttatatgaaaataatttgactttattttatctt 27693544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 9e-23; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 50662847 - 50662921
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||| || |||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  50662847 aaatagcttatacataaacgctcatcatgataagctcttgtgatataagctgcaaataagttgtttatccaaaca 50662921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 3155650 - 3155486
Alignment:
Q  9 agcttattttcataagttcattgagatagcttacgaaaacag---gcagcttatacgaaaataatttaactttattttatcttttgttattaaaaattta 105  Q
    ||||||||||||| ||||| |  |||||| ||| ||||||||   | ||||| ||| |||| |||||||||||||||||||||||| |||  |||         
T  3155650 agcttattttcattagttcttcaagatagtttatgaaaacagcttgtagcttgtacaaaaacaatttaactttattttatcttttgctatagaaa----- 3155556  T
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
      ||||||||||| |   |||||||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  3155555 --tagcttatacatacatgcttatcatgataagcgcttgtactataagctgcagataagttgtttatccaaa 3155486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 44863077 - 44863151
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||| || |||| |||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  44863077 aaatagcttatgcataagcacttatcatgacaagtgcttgtgctataagctgcaaataagttgtttatccaaaca 44863151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 35571947 - 35572021
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| ||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  35571947 aaatagcttatacataagtgcttgtcatgataaccacttgtgctataagctgcaaataag-tgtttatccatacag 35572021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 27025 - 27083
Alignment:
Q  122 gcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  27025 gcgcttatcatgataagcgcttgtgctataagctgcaaacaagatgtttatccaaacag 27083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 50681218 - 50681288
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| || ||||||||||||||||  |||||||||||||||  ||||||||||||||||||||||    
T  50681218 agcttatacataaacgcttatcatgataagttcttgtgctataagctataaataagttgtttatccaaaca 50681288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 30066880 - 30066957
Alignment:
Q  104 taaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaacag 180  Q
    ||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||||| ||| |||||||| |||||||    
T  30066880 taaatagcttatacacaagtgcttatcattataagcgcttatgctataagctgcaaattaaattgtttatgcaaacag 30066957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 11389474 - 11389407
Alignment:
Q  112 ttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||| |||| ||||||||||||||||||  || ||||| ||||||||||||||||||||||||||    
T  11389474 ttatacataagcacttatcatgataagcactcatgatataaactgcaaataagttgtttatccaaaca 11389407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 26520299 - 26520420
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||  |||        || ||||||| ||| |||||||||||||| ||||| ||||| ||    
T  26520299 agcttacacgaaaacaatttaactttatttcatcttttgttatagaaac-------agtttatacataagtgcttatcatgataaacacttatgctagaa 26520391  T
Q  153 gctgcaaa-taagttgtttatccaaacag 180  Q
    || ||||| ||||||||||||||||||||    
T  26520392 gcagcaaattaagttgtttatccaaacag 26520420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 51630158 - 51629991
Alignment:
Q  9 agcttattttcataagttcattgagatagcttacgaaaacaggc---agcttatacgaaaataatttaactttattttatcttttgttattaaaaattta 105  Q
    ||||||||||||||| ||| |  |||||||||| ||||| ||     ||||||||  |||| |||||||||||||||||||||||| |||        ||    
T  51630158 agcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatcttttgctata-------ta 51630066  T
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||  ||||||| ||||||||| ||||||||||||| | |||||  |||||||| |||||||| ||||||    
T  51630065 aatagcttgaacacaagtgcttatcataataagcacttgtgttgtaagcctcaaataaggtgtttatctaaacag 51629991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 17204068 - 17204007
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagt 181  Q
    ||||| ||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  17204068 aagcggttatcgtgataagtgcttgttctataagctgcaaataagttgtttatccaaacagt 17204007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 25904358 - 25904415
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagt 181  Q
    |||||||||||||||  |||||||||||| |||||||| |||||||||||||||||||    
T  25904358 gcttatcatgataagtgcttgtgctataatctgcaaatgagttgtttatccaaacagt 25904415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 679208 - 679136
Alignment:
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaa 177  Q
    ||||| ||||||| ||||||||||||| |||||||| |||| |||||||| |||| |||||||||||||||||    
T  679208 aatagattatacataagcgcttatcattataagcacatgtgttataagctacaaattaagttgtttatccaaa 679136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 45935365 - 45935413
Alignment:
Q  132 tgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  45935365 tgataagcgcttgagctataagctgcaaataagttgtttatccaaacag 45935413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 2987144 - 2987069
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    |||||||||||| | ||| |||||||||||||| ||||| || ||||||||||||| ||| |||||||||||||||    
T  2987144 aaatagcttataaataagtgcttatcatgataaacacttatgttataagctgcaaattaacttgtttatccaaaca 2987069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 43505897 - 43505829
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| ||| ||||||||||||  ||  |||||||||||| |||||||||||||||||||||||||    
T  43505897 agcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttgtttatccaaaca 43505829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 44797817 - 44797762
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  44797817 cttaccatgataatcgcttgtgctataagttgcaaataagttgtttatccaaacag 44797762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 30377813 - 30377863
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat 161  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  30377813 cttatacacaagtgcttatcatgataaacatttgtgctataagctgcaaat 30377863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 22539165 - 22539234
Alignment:
Q  108 tagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||||||||| || ||||| ||||||||||  ||| |||||||| ||||||||||||| ||||||||||    
T  22539165 tagcttatacataaacgcttgtcatgataagggcttatgctataacctgcaaataagttatttatccaaa 22539234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 47800670 - 47800588
Alignment:
Q  9 agcttattttcataagttcattgagatagcttacgaaaacaggcagcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||||||||||| || |  |||||||||| ||||||||    ||||||| |||| | ||||||||||||||||||||||||||    
T  47800670 agcttattttcataagctcttcaagatagcttatgaaaacag----cttatacaaaaacattttaactttattttatcttttgttat 47800588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 47119086 - 47119134
Alignment:
Q  131 atgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  47119086 atgataagtgcttgtgctataagttgcaaataagttgtttatccaaaca 47119134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 49202579 - 49202527
Alignment:
Q  127 tatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||| ||||  ||||| |||||||||||||||||||||||||||||||||    
T  49202579 tatcatgttaagtgcttgtactataagctgcaaataagttgtttatccaaaca 49202527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 1203232 - 1203302
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| ||  |||| |||||||||||||||     ||||||||||||||| ||||||||||||||||    
T  1203232 aaatagcttatacaaaaatgcttttcatgataagcactt-----ataagctgcaaataaattgtttatccaaacag 1203302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 4212851 - 4212812
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  4212851 cttgtgctataagctgaaaataagttgtttatccaaacag 4212812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 21731768 - 21731819
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctg 156  Q
    |||||||||||||  |||| ||||||||||||||| ||||||||||||||||    
T  21731768 aaatagcttatacgtaagcacttatcatgataagcgcttgtgctataagctg 21731819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 27330186 - 27330225
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27330186 cttgtgctataagctacaaataagttgtttatccaaacag 27330225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 4071882 - 4071840
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  4071882 agcttatatgaaaataatttgactttattttatcttttgttat 4071840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 27043900 - 27043942
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  27043900 agcttatacgaaaacaatttaactttattttatcctttgttat 27043942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 44249285 - 44249243
Alignment:
Q  54 gcttatacgaaaataatttaactttattttatcttttgttatt 96  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  44249285 gcttatacggaaataatttaactttgttttatcttttgttatt 44249243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 19494853 - 19494784
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| | | ||||||||||| ||| |||||||||||||||| | |||||| |||||||| ||||||    
T  19494853 cttatacataggtgcttatcatgaaaagtacttgtgctataagctccgaataagatgtttatctaaacag 19494784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 53294234 - 53294288
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataag-ttgtttatccaaaca 179  Q
    |||||||||||||||| |||||||  ||||||||||||||| |||||||||||||||    
T  53294234 gcttatcatgataagcgcttgtgc--taagctgcaaataagcttgtttatccaaaca 53294288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 1242401 - 1242457
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagtt 166  Q
    ||||||| | ||| |||||| ||||||||||||| | ||||||||||||||||||||    
T  1242401 gcttataaataagtgcttattatgataagcacttatactataagctgcaaataagtt 1242457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 13126736 - 13126812
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    ||||||||  ||||||||||| || | |||||||||  |||||||||| ||||||| |||| |||||||||| ||||    
T  13126736 agcttatatgcaagcgcttatgataacaagcacttgcactataagctgaaaataagatgttaatccaaacagagcct 13126812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 15173429 - 15173493
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||||||||| | ||||||||||||||||||  |||||||| |||||| ||||||| | ||||||    
T  15173429 agcttatacatatgcgcttatcatgataagcgtttgtgctacaagctgaaaataagctatttatc 15173493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 17884066 - 17884026
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||| |||| ||||||||||||||||||||||||||||    
T  17884066 cttatacaaaaacaatttaactttattttatcttttgttat 17884026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 35571746 - 35571817
Alignment:
Q  108 tagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||| ||| | ||||||| ||||||||||  ||||||| | ||||||||| |||||||||||||||    
T  35571746 tagcttatacataagtg-ttatcatcataagcacttccgctataaacggcaaataaggtgtttatccaaacag 35571817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 44138510 - 44138442
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||| ||||   ||||||||||||  ||||| ||| |||||||||||||| ||||||||||||    
T  44138510 agcttatacataagcaagtatcatgataagtgcttgtactaaaagctgcaaataagctgtttatccaaa 44138442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 45104522 - 45104597
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgc-aaataagttgtttatccaaacag 180  Q
    ||||||||||| |||||| |||||| ||| ||| | ||||||||||||||||| |||||| | ||||||||||||||    
T  45104522 aaatagcttattcacaagtgcttat-atgttaaactcttgtgctataagctgcaaaataattagtttatccaaacag 45104597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 49004085 - 49004141
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat 161  Q
    |||| ||||||||| ||||||||||||| |||||| | |||||||||| ||||||||    
T  49004085 aaattgcttatacataagcgcttatcattataagcgcatgtgctataatctgcaaat 49004141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 55084589 - 55084637
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataag 153  Q
    ||||||||||| || |||||||||||||||||| ||||| |||||||||    
T  55084589 aaatagcttatgcataagcgcttatcatgataatcacttatgctataag 55084637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 437375 - 437430
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||   |||||  |||||||||||||||||| ||||||||||||||    
T  437375 cttatcatgataaaagcttgtattataagctgcaaataagtcgtttatccaaacag 437430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 18815032 - 18814962
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| || ||| |||||| ||||||||||||||||| |||||||||||||||    |||||||||||||    
T  18815032 agcttatgcaaaagtgcttat-atgataagcacttgtgccataagctgcaaataaaccatttatccaaacag 18814962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 25332774 - 25332656
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    ||||||||| |||| |||||||||| |||| | |||||  |||  |||   ||||||||||||||| |||| | |||||||| || ||| ||||   |||    
T  25332774 agcttatacaaaaacaatttaacttcatttcaacttttactatagaaa---taaatagcttatacataagctcctatcatgagaaacacatgtgtcgtaa 25332678  T
Q  153 gctgcaaataagttgtttatcc 174  Q
    ||||||||||||| ||||||||    
T  25332677 gctgcaaataagtcgtttatcc 25332656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 8130174 - 8130132
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||    
T  8130174 agcttatatgaaaataatttgactttatgttatcttttgttat 8130132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 11917556 - 11917518
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgtta 94  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  11917556 ttatatgaaaataatttgactttattttatcttttgtta 11917518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Complemental strand, 20108946 - 20108912
Alignment:
Q  143 tgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||||||| ||||||||||||||||    
T  20108946 tgtgctataagctgcaaaaaagttgtttatccaaa 20108912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 25885859 - 25885821
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttg 91  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  25885859 agcttacacgaaaacaatttaactttattttatcttttg 25885821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 30024700 - 30024658
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||    
T  30024700 agcttatatgaaaacaattttactttattttatcttttgttat 30024658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 31851439 - 31851343
Alignment:
Q  68 aatttaactttattttatcttttgttattaaaaat---ttaaat-agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataa 163  Q
    ||||||||||||||||||| |||||||| ||||||   |||  | ||||| |||| ||  |||||||||||||||||||||||  |||||||||||||||    
T  31851439 aatttaactttattttatcatttgttat-aaaaatagcttatgtgagcttctacataaatgcttatcatgataagcacttgtg--ataagctgcaaataa 31851343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 34213730 - 34213768
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  34213730 ttgtgttataagctgcaaataagttgcttatccaaacag 34213768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 39178376 - 39178426
Alignment:
Q  131 atgataagcacttgtgctataagctgcaaa-taagttgtttatccaaacag 180  Q
    ||||||||||||| | |||||||||| ||| ||||||||||||||||||||    
T  39178376 atgataagcacttatactataagctgtaaaataagttgtttatccaaacag 39178426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 39603594 - 39603628
Alignment:
Q  143 tgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||||||||||| ||||||||||||    
T  39603594 tgtgctataagctgcaaataagctgtttatccaaa 39603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 49219139 - 49219097
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||||||||| |||||||||||| |||||||||    
T  49219139 agcttatatgaaaataatttgactttattttatattttgttat 49219097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 6978782 - 6978823
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttatta 97  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||    
T  6978782 ttatatgaaaatagtttaactatattttatcttttgttatta 6978823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 23277366 - 23277317
Alignment:
Q  107 atagcttatacacaagcgcttatcatgataagcacttgtgctataagctg 156  Q
    |||||||||||| |||| |||||||| |||||  ||||||||||||||||    
T  23277366 atagcttatacataagctcttatcattataagtgcttgtgctataagctg 23277317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 180
Target Start/End: Complemental strand, 23319761 - 23319728
Alignment:
Q  147 ctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||||||| ||||||||||||    
T  23319761 ctataagctgcaaataagttgcttatccaaacag 23319728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 25885785 - 25885756
Alignment:
Q  150 taagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||||||||||||||||||||    
T  25885785 taagctgcaaataagttgtttatccaaaca 25885756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 27043958 - 27044003
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||| || ||||||||||||| | ||||||||||||||||||||    
T  27043958 ataagcgctagtgctataagctgtagataagttgtttatccaaaca 27044003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 38346058 - 38346099
Alignment:
Q  55 cttatacgaaaataatttaactttat-tttatcttttgttat 95  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  38346058 cttatacgaaaataatttaaatttatctttatcttttgttat 38346099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 40532946 - 40532979
Alignment:
Q  57 tatacgaaaataatttaactttattttatctttt 90  Q
    ||||||| ||||||||||||||||||||||||||    
T  40532946 tatacgagaataatttaactttattttatctttt 40532979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 47771935 - 47771875
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaacag 180  Q
    |||||||||| ||||||||| ||| ||||||||||| |||| |||| |||||||||||||||    
T  47771935 aagcgcttat-atgataagcgcttatgctataagctccaaaataagctgtttatccaaacag 47771875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 50298480 - 50298411
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat-aagttgtttatccaaaca 179  Q
    |||||||| ||||  |||||||||||||   || ||||||||||| ||||| ||||||||||||||||||    
T  50298480 cttatacataagcatttatcatgataagtgtttatgctataagcttcaaattaagttgtttatccaaaca 50298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 52746911 - 52746952
Alignment:
Q  54 gcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||| || |||| ||||||||||||||||||||||||||||    
T  52746911 gcttacacaaaaacaatttaactttattttatcttttgttat 52746952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 177
Target Start/End: Complemental strand, 22030120 - 22030092
Alignment:
Q  149 ataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||||||||||||||||||    
T  22030120 ataagctgcaaataagttgtttatccaaa 22030092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 23503549 - 23503517
Alignment:
Q  63 aaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||||||||||||||| |||||||||    
T  23503549 aaaataatttaactttattttatattttgttat 23503517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 30770872 - 30770836
Alignment:
Q  64 aaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  30770872 aaataatttaactttattttatcttttattataaaaa 30770836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Original strand, 34430800 - 34430832
Alignment:
Q  104 taaatagcttatacacaagcgcttatcatgata 136  Q
    ||||||||||||||||||||||||| |||||||    
T  34430800 taaatagcttatacacaagcgcttaccatgata 34430832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 34430831 - 34430863
Alignment:
Q  148 tataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||||||||||| ||||||||    
T  34430831 tataagctgcaaataagttgtttaaccaaacag 34430863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 44248773 - 44248741
Alignment:
Q  145 tgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||||||||||||||| |||||||||||||||    
T  44248773 tgctataagctgcaaattagttgtttatccaaa 44248741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 180
Target Start/End: Complemental strand, 54214930 - 54214894
Alignment:
Q  145 tgctataagctgcaaat-aagttgtttatccaaacag 180  Q
    ||||||||||||||||| |||||||||||||||||||    
T  54214930 tgctataagctgcaaattaagttgtttatccaaacag 54214894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 9e-23; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 402656 - 402730
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  402656 aaatagcttatacataagcccttatcatgataagcacttgtgctatgagctgcaaataagttgtttgttcaaaca 402730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 1508710 - 1508779
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  1508710 agcttatacataagcgcttatcatgataagcacttgtgctataagttgcaaataagctgtttttccaaac 1508779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 31365401 - 31365472
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  31365401 agcttatacataagtgcttatcatgataatcacttgtgctataagctgcaaataagctgtttatccacacag 31365472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 34235191 - 34235265
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||| |||| ||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  34235191 aaatagcttctacataagtgcttatcatgataagcacatgtactataagctacaaataagttgtttatccaaaca 34235265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 30956700 - 30956825
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgttattaaaaat---ttaaata-gcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    ||||| |||| |||||||||||||||||||||||| ||| | ||||   |||  || |||||| || ||  |||||||||||||||| ||||||||||||    
T  30956700 tatacaaaaacaatttaactttattttatcttttgctat-agaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataa 30956798  T
Q  153 gctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||| ||||||||||||||    
T  30956799 gctgcaaataagctgtttatccaaaca 30956825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 30972512 - 30972637
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgttattaaaaat---ttaaata-gcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    ||||| |||| |||||||||||||||||||||||| ||| | ||||   |||  || |||||| || ||  |||||||||||||||| ||||||||||||    
T  30972512 tatacaaaaacaatttaactttattttatcttttgctat-agaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataa 30972610  T
Q  153 gctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||| ||||||||||||||    
T  30972611 gctgcaaataagctgtttatccaaaca 30972637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 46886835 - 46886887
Alignment:
Q  128 atcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46886835 atcatgataagcacttatgctataagctgcaaataagttgtttatccaaacag 46886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 944421 - 944363
Alignment:
Q  123 cgcttatcatgataagcactt-gtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  944421 cgcttatcatgataagcacttagtgttataagctgcaaataagttgtttatccaaacag 944363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 35959585 - 35959655
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||| |||| ||||||||||||||  |||||| ||||||||||||||||| ||||||||||||||    
T  35959585 agcttatacataagctcttatcatgataagagcttgtgatataagctgcaaataagctgtttatccaaaca 35959655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 28240281 - 28240213
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||||||||| | | |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  28240281 aaatagcttaaatataagcacttatcatgataagcgcttgtgctataagctgcagataagttgtttatc 28240213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 20880418 - 20880347
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| |||| ||||| ||||||| | |||||||||||| ||||||||||||||| |||||||||||    
T  20880418 agcttatacataagcacttattatgataaccgcttgtgctataaactgcaaataagttgtctatccaaacag 20880347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 20003430 - 20003483
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  20003430 ttatcatgataagcactcgtgctataagctacaaataagttgtttctccaaaca 20003483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 47132303 - 47132242
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||||||||  ||||||||||||| || ||||||||||||||||||||||| ||||    
T  47132303 gcttatcatgataagtgcttgtgctataaggtgaaaataagttgtttatccaaacagggcct 47132242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 34034097 - 34034041
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||| | ||| |||||||||| |||||||||||||||||||||||    
T  34034097 gcttatcatgataagcgcctgttctataagctgaaaataagttgtttatccaaacag 34034041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 20170464 - 20170393
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| ||||| ||||||||||||||| ||||| ||||| ||||| ||||||||||||||||| ||| |||||    
T  20170464 agctgatacataagcgcttatcatgaaaagcagttgtgatataaactgcaaataagttgtttctcccaacag 20170393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 31403313 - 31403238
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||| | ||| |||||| |||||||||||||| |||| || ||||||||||  |||||||||||||||    
T  31403313 aaatagcttatatataagtgcttatgatgataagcacttgggctagaaactgcaaataacctgtttatccaaacag 31403238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 34610942 - 34610993
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  34610942 ttatcatgataagcgcttgtgttataagctgcagataagttgtttatccaaa 34610993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 849590 - 849552
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||||||||||||||||||||||||||    
T  849590 ttgtgctataagctgcaaataagttgtttatccaaacag 849552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 3845691 - 3845767
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||| |||| ||||| |  |||||  |||||||||| | ||||||||||||||||||||||||||| ||||    
T  3845691 agcttatacaaaagcacttattacaataagtgcttgtgctatgaactgcaaataagttgtttatccaaacagggcct 3845767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 19983721 - 19983653
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||| || |||||||||| |||| || || ||||||||  |||||||||||||||||||||||    
T  19983721 agcttatacataaacgcttatcataataaacaattatgctataaattgcaaataagttgtttatccaaa 19983653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 30574027 - 30574103
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaacag 180  Q
    |||||||||||||| ||||||||||||||||||   ||| || ||||||||||||| || | |||||||||||||||    
T  30574027 aaatagcttatacataagcgcttatcatgataaatgcttatgatataagctgcaaattatggtgtttatccaaacag 30574103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 53789590 - 53789666
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||| ||| ||| |||||||||||||||| ||||||  ||||||||||| ||||| ||||| |||||||| ||||    
T  53789590 agcttacacataagtgcttatcatgataagcgcttgtggcataagctgcaattaagtcgtttacccaaacagggcct 53789666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 12833934 - 12833871
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    ||||||| | ||| |||||| ||||||||||||| |||||||||||||| ||||||| ||||||    
T  12833934 gcttataaataagtgcttattatgataagcacttatgctataagctgcatataagttttttatc 12833871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 20257497 - 20257430
Alignment:
Q  113 tatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| ||||||||||| ||||||   |||||| |||||||||||||||| ||||| ||||||||||    
T  20257497 tatacataagcgcttatcgtgataaagtcttgtgttataagctgcaaataaattgttaatccaaacag 20257430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 23816008 - 23815949
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataag 164  Q
    ||||| |||||||| ||| ||||||||||||||||||||  |||||||| ||||||||||    
T  23816008 aaataacttatacataagtgcttatcatgataagcactttggctataagatgcaaataag 23815949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 29002955 - 29003030
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||| |||||||| ||| | |||||||||||| | ||| | ||||||||||||||||| || |||||||||||||    
T  29002955 aaataacttatacataagtgtttatcatgataaacgcttttactataagctgcaaataaattatttatccaaacag 29003030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 36631195 - 36631250
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||||||||||||||   ||| |||||||||||| |||||||||    
T  36631195 gcttatcatgataagcacttgtgctattgtctgaaaataagttgttaatccaaaca 36631250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 37689454 - 37689501
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  37689454 agcttatatgaaaataatttaactttactttatcttttgttataaaaa 37689501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 40665384 - 40665329
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa 160  Q
    ||||||||| |||| ||| ||||||||||||||| |||| ||||||||||||||||    
T  40665384 aaatagcttgtacagaagtgcttatcatgataagaacttatgctataagctgcaaa 40665329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 1395671 - 1395629
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  1395671 agcttatatgaaaataatttgactttattttatcttttgttat 1395629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 2719395 - 2719341
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    ||||||||||||||||  ||||||||||||||| ||||||| ||||||| |||||    
T  2719395 gcttatcatgataagcgtttgtgctataagctgtaaataagctgtttattcaaac 2719341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 37138288 - 37138234
Alignment:
Q  134 ataagcacttgtgctataagctgcaaat-aagttgtttatccaaacagtgcctga 187  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||    
T  37138288 ataagcacttatgctataagcttcaaattaagttgtttatccaaacagtacctga 37138234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 47249583 - 47249653
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatcca 175  Q
    ||||||||||||||  |||  |||||||||||||  |||||| ||||||||||||||||| | ||||||||    
T  47249583 aaatagcttatacatgagcatttatcatgataagtgcttgtgttataagctgcaaataagctatttatcca 47249653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 19836601 - 19836544
Alignment:
Q  121 agcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    |||||||||  |||||||| ||||||||||||||   |||||||||||||||||||||    
T  19836601 agcgcttattgtgataagcgcttgtgctataagcactaaataagttgtttatccaaac 19836544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 24684954 - 24685023
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||| || |||||||||||||||| || | ||||||||||||||||||||||   || |||||||||||    
T  24684954 cttatgcaaaagcgcttatcatgatgagaatttgtgctataagctgcaaataaaccgtctatccaaacag 24685023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 35328279 - 35328351
Alignment:
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| || |||| ||| ||||||||| |||||| ||||| |||||||||||||||||| | ||||||||||||    
T  35328279 aataggttgtacataagtgcttatcataataagcgcttgt-ctataagctgcaaataagctatttatccaaaca 35328351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 39442374 - 39442321
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||||||| ||||||||||  || |||||||||||||||| ||||||||||||    
T  39442374 gcttatcataataagcacttaagccataagctgcaaataagctgtttatccaaa 39442321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 5435772 - 5435712
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    |||| ||||||||||||||||||| |||||||||||| ||| |||||||  ||||||||||    
T  5435772 aagcacttatcatgataagcacttatgctataagctgtaaattaagttgcctatccaaaca 5435712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 7814265 - 7814321
Alignment:
Q  110 gcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagtt 166  Q
    ||||||| | ||| |||||| ||||||||||||| | ||||||||||||||||||||    
T  7814265 gcttataaataagtgcttattatgataagcacttatactataagctgcaaataagtt 7814321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 10101548 - 10101588
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  10101548 cttatatgaaaacaatttaactttattttatcttttgttat 10101588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 10212473 - 10212513
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  10212473 cttatatgaaaacaatttaactttattttatcttttgttat 10212513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 28795961 - 28796025
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||||||||| ||| | ||||||||||||    ||||||||||||||| ||||||||||||||||    
T  28795961 agcttatacataagtgtttatcatgataaatgtttgtgctataagctgtaaataagttgtttatc 28796025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 30443690 - 30443658
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctg 156  Q
    |||||||||||||||||||||||||||||||||    
T  30443690 gcttatcatgataagcacttgtgctataagctg 30443658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 32555051 - 32555091
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  32555051 agcttataggaaaataatttgactttattttatcttttgtt 32555091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 36507241 - 36507277
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||||||||||||||||||||||||||| |||||||    
T  36507241 cttgtgctataagctgcaaataagttgttcatccaaa 36507277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 139802 - 139873
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| || |||||||||||||||||||  | ||  ||||||||| |||||||||||  |||||||||||    
T  139802 agcttatgcataagcgcttatcatgataagtgcctgcactataagctccaaataagttgcgtatccaaacag 139873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 15304420 - 15304459
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  15304420 ttatatgaaaacaatttaactttattttatcttttgttat 15304459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 25447359 - 25447430
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaa 176  Q
    |||||| ||| ||| ||| |||| ||||||||||| |||||| ||||||||||| ||||  |||||||||||    
T  25447359 aaatagtttacacaaaagtgcttctcatgataagcgcttgtgttataagctgcacataaactgtttatccaa 25447430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 35127486 - 35127557
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat-aagttgtttatcca 175  Q
    ||||||| |||||| |||| ||||||||||||||  ||| || |||||||||||||| ||| ||||||||||    
T  35127486 aaatagcctatacataagcacttatcatgataagagcttatggtataagctgcaaatgaagctgtttatcca 35127557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 37788857 - 37788818
Alignment:
Q  56 ttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  37788857 ttatacgaaaataattggactttattttatcttttgttat 37788818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 42747913 - 42747956
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||    
T  42747913 ttgtgctataagttgcaaataagctgtttatccaaacagggcct 42747956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 42800057 - 42800112
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| |||||||||| ||| ||||||||||| |||||||| |||| |||||||||    
T  42800057 gcttaacatgataagcgcttctgctataagctacaaataagctgttaatccaaaca 42800112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 42808980 - 42808937
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||||  |||| ||||||||||||||||||||||||||||    
T  42808980 cagcttatataaaaacaatttaactttattttatcttttgttat 42808937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 42809302 - 42809259
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||    
T  42809302 cagcttatatgaaaacaatttaactatattttatcttttgttat 42809259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 3846043 - 3846081
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  3846043 ttgtgctataagctacaaataagctgtttatccaaacag 3846081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 14145908 - 14145870
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  14145908 tatacgaaaacaatttaactttattttatcttctgttat 14145870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 25195415 - 25195373
Alignment:
Q  62 gaaaataatttaactttattttatcttttgttattaaaaattt 104  Q
    ||||||||||| ||||||||||||||||||||||  |||||||    
T  25195415 gaaaataatttgactttattttatcttttgttatagaaaattt 25195373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 39122834 - 39122887
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||  | ||||| ||||||||||||||||||||| |||||||||||    
T  39122834 cttatcatgatacacgcttgtactataagctgcaaataagttg-ttatccaaaca 39122887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 39980668 - 39980610
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtt 169  Q
    |||||||| ||| |||||||||||||||   |||| |||||||||||||||||| ||||    
T  39980668 cttatacataagtgcttatcatgataagtgtttgtcctataagctgcaaataagctgtt 39980610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 46407549 - 46407503
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||| ||||||| |||||||||||||| |||||| ||||||||||||    
T  46407549 ataaacacttgtactataagctgcaaaaaagttggttatccaaacag 46407503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 12704123 - 12704172
Alignment:
Q  107 atagcttatacacaagcgcttatcatgataagcacttgtgctataagctg 156  Q
    |||||||||||||||| | |||||||||||||  |||||| |||||||||    
T  12704123 atagcttatacacaagtgtttatcatgataagtgcttgtgttataagctg 12704172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 24085485 - 24085522
Alignment:
Q  150 taagctgcaaataagttgtttatccaaacagtgcctga 187  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  24085485 taagctgcaaataagttgtttatccaaacggagcctga 24085522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 30365679 - 30365728
Alignment:
Q  128 atcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||   ||||||||||||||  ||||||||||||||||||||    
T  30365679 atcatgataagtgtttgtgctataagctataaataagttgtttatccaaa 30365728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 38902002 - 38901961
Alignment:
Q  144 gtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||| |||||||||| ||||||||||||||| ||||    
T  38902002 gtgctataagttgcaaataagctgtttatccaaacagggcct 38901961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 46778356 - 46778413
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagtt 166  Q
    |||| ||||| |||||||||||||||||||   |||| ||||||| ||||||||||||    
T  46778356 agctgatacataagcgcttatcatgataagtgtttgtactataaggtgcaaataagtt 46778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 55113598 - 55113549
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaa-taagttgtttatcc 174  Q
    |||||||||||| ||||| |||||||||||||||| |||||||| |||||    
T  55113598 ttatcatgataaacacttatgctataagctgcaaattaagttgtgtatcc 55113549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 2128331 - 2128363
Alignment:
Q  63 aaaataatttaactttattttatcttttgttat 95  Q
    |||| ||||||||||||||||||||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttat 2128363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 5456775 - 5456735
Alignment:
Q  145 tgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  5456775 tgctataagctgcaaataagttagttatccaaacagggcct 5456735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 5495844 - 5495812
Alignment:
Q  147 ctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||||||||||| |||||||||||    
T  5495844 ctataagctgcaaataagttggttatccaaaca 5495812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 10277382 - 10277458
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcactt-gtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| ||| | |||||||||||| |  || |||||||||| |||||| |||  ||||||||||||||    
T  10277382 aaatagcttatacataagtgtttatcatgataaacggtttgtgctataagatgcaaaaaagaagtttatccaaacag 10277458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 10357431 - 10357391
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| ||||| |||||||| |||||||||||||||||||    
T  10357431 cttatatgaaaaaaatttaacattattttatcttttgttat 10357391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 31053162 - 31053202
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||||||| || | ||||||||||||||||||||    
T  31053162 cttatacgaaaataaattgattttattttatcttttgttat 31053202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 33883018 - 33882986
Alignment:
Q  63 aaaataatttaactttattttatcttttgttat 95  Q
    |||||||||| ||||||||||||||||||||||    
T  33883018 aaaataatttcactttattttatcttttgttat 33882986  T

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Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 43062651 - 43062579
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||| |||||| || |||| ||||||| ||||||  ||||||||||||||||| |||| || |||| ||||||    
T  43062651 aaatggcttatgcataagcacttatcacgataagggcttgtgctataagctgctaataggtcgtttttccaaa 43062579  T

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Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 50946407 - 50946439
Alignment:
Q  145 tgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||||||||||||| ||||||||    
T  50946407 tgctataagctgcaaataagttgtatatccaaa 50946439  T

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Target: chr7 (Bit Score: 52; Significance: 5e-21; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 21568757 - 21568828
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  21568757 agcttatacataagtgcttatcatgataagcacttatgctataagctgcaaacaagctgtttatccaaacag 21568828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 33552936 - 33553007
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaa 176  Q
    |||||||||||||| |||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||    
T  33552936 aaatagcttatacataagcgcttatcatggtaagtgcttgtgcaataagctgcaaataagttgtttatccaa 33553007  T

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Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 27863843 - 27863897
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27863843 ttatcatgataagcacttgtgctataagctacaaataagttgtttatccaaacag 27863897  T

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Target: chr7; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 33673030 - 33672958
Alignment:
Q  108 tagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||| | ||||||||||||||    
T  33673030 tagcttatacataagcgcttatcataataaatacttgtgctataagctgcaaataaatagtttatccaaacag 33672958  T

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Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 38500051 - 38500118
Alignment:
Q  113 tatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||    
T  38500051 tatacataagcgcttatcatgataagcgcttgtgctataaactgcaaataagctgtttatctaaacag 38500118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 18865195 - 18865249
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18865195 cttatcatgataagcgtttgtgctataagctgcaaataagttgtttatccaaaca 18865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 33678722 - 33678663
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  33678722 aagctcttatcatgataagcacttgtgctataagatgcaaataagctgtttgtccaaaca 33678663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 46139897 - 46139822
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||| | || | ||||||||||||||  |||||| |||||||||||||||||||||||| ||||||||    
T  46139897 aaatagcttatagataatcacttatcatgataagtgcttgtgttataagctgcaaataagttgtttaaccaaacag 46139822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 47795912 - 47795838
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||| ||||||| ||| | |||||||||||||| ||| |||||||||||||||||||| |||||||| |||||    
T  47795912 aaataggttatacataagtggttatcatgataagcgcttatgctataagctgcaaataagctgtttatctaaaca 47795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 3308383 - 3308452
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| |||| |||||||||| ||| |||||||||||||||| |||||||| |||||||| ||||||    
T  3308383 cttatacataagcacttatcatgaaaagtacttgtgctataagctccaaataagctgtttatctaaacag 3308452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 31002882 - 31002957
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttat 129  Q
    ||||||||||||||||||  ||||||||| |||||||||||| |||||||  |||||||||| ||| ||||||||||    
T  31002882 agcttatacgaaaataatacaactttattctatcttttgtta-taaaaataaaaatagcttacacataagcgcttat 31002957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 45264023 - 45263963
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| ||||||||||| ||||||  |||||| |||||||||||||||||||||||||    
T  45264023 aagcgcttttcatgataagcgcttgtgtgataagccgcaaataagttgtttatccaaacag 45263963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 9210569 - 9210498
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||||| ||||||||||||    ||| ||||||||||||||||||| |||||||||||||||    
T  9210569 agcttatacataagcgattatcatgataaatgtttgcgctataagctgcaaataagctgtttatccaaacag 9210498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 33128698 - 33128627
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| || |||| ||||||||||||||   ||||||| ||||||||||||||| |||||||||||||||    
T  33128698 agcttatgcataagcacttatcatgataagtgtttgtgctgtaagctgcaaataagctgtttatccaaacag 33128627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 39393692 - 39393770
Alignment:
Q  106 aatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    ||||||||||| | |||||||||||||||| |   |||||||||||||||||||||||| |||| |||||||||| ||||    
T  39393692 aatagcttata-ataagcgcttatcatgatcaaagcttgtgctataagctgcaaataagctgttcatccaaacagggcct 39393770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 40196307 - 40196248
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||||||| | |||||| ||| || |||||||||||||||||||||||    
T  40196307 aagcgcttatcatgataagcgcatgtgctgtaaactacaaataagttgtttatccaaaca 40196248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 28900884 - 28900760
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgttattaaaaatt-taaatagc---ttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    ||||| || ||||||||||||||||||||| |||| || |||||||  || ||  |   ||| ||| ||||||||||||| ||||   |||||| |||||    
T  28900884 tatacaaagataatttaactttattttatcatttgataataaaaataatatatgtccgattagacataagcgcttatcataataaatgcttgtgttataa 28900785  T
Q  153 gctgcaaataagttgtttatccaaa 177  Q
    |||||||||||||||||||||||||    
T  28900784 gctgcaaataagttgtttatccaaa 28900760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 47177591 - 47177517
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| |||||||| ||| ||||||||| |||||  ||| |||||||| | ||||||||||||||||||||||||    
T  47177591 aaataccttatacagaagggcttatcatcataagtgcttatgctataatcagcaaataagttgtttatccaaaca 47177517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 48131300 - 48131227
Alignment:
Q  108 tagcttatacacaagcgcttatcatgataagcacttgtgctataagctgc-aaataagttgtttatccaaacagt 181  Q
    ||||| ||||| |||||||||| ||||||||||||| |||| |||||||| ||||||||||| ||||||||||||    
T  48131300 tagctgatacataagcgcttat-atgataagcacttatgctgtaagctgcaaaataagttgtgtatccaaacagt 48131227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 7612419 - 7612346
Alignment:
Q  100 aatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-taagttgtttat 172  Q
    |||| |||||||||||||| | | |||||||||||||||  ||| |||||||||||||||| ||||||||||||    
T  7612419 aattaaaatagcttatacatatgagcttatcatgataagtgcttatgctataagctgcaaattaagttgtttat 7612346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 23989615 - 23989684
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| |||  ||||||||||||||| | ||| |||||||||||||||||||||||  |||||||||    
T  23989615 cttatacataagaacttatcatgataagcgcgtgtactataagctgcaaataagttgttactccaaacag 23989684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 18965800 - 18965905
Alignment:
Q  71 ttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttat----catgataagcacttgtgctataagctgcaaataagtt 166  Q
    ||||||||||||||| |||||||| || |||||    ||||||||||||||| ||||||    |||||||| |||||||| |||||||| || ||||| |    
T  18965800 ttaactttattttattttttgtta-tagaaatt----tagcttatacacaagtgcttatcatgcatgataaacacttgtgttataagctacatataagat 18965894  T
Q  167 gtttatccaaa 177  Q
    |||||||||||    
T  18965895 gtttatccaaa 18965905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 20526635 - 20526707
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    ||||| |||||||| ||| ||| ||||| ||||||| |||||||||||| |||||||||  ||||||||||||    
T  20526635 aaataccttatacataagagctaatcattataagcatttgtgctataaggtgcaaataatgtgtttatccaaa 20526707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 20881753 - 20881825
Alignment:
Q  107 atagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||| ||||| ||| |||||||||||||||  |||||||||||| || ||||||||||||| ||| |||||    
T  20881753 atagctcatacataagagcttatcatgataagtgcttgtgctataaactacaaataagttgttcatctaaaca 20881825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 19718962 - 19718887
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||||||| | |||||||||||||  |||||| |||||||||||| ||||||  | ||||||||||    
T  19718962 aaatagcttacacacaagtgtttatcatgataagtgcttgtgttataagctgcaattaagtttctcatccaaacag 19718887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 21619362 - 21619295
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttat 172  Q
    |||||||||| | | ||| |||||||||||||||  ||||||||||||||||||||| || |||||||    
T  21619362 aaatagcttagagataagtgcttatcatgataagtgcttgtgctataagctgcaaattagatgtttat 21619295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 7241445 - 7241527
Alignment:
Q  104 taaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcctg 186  Q
    ||||| ||||||||| || | ||||||||||| | |||||||| || || ||||||||||||||||  ||||||||| |||||    
T  7241445 taaattgcttatacataaacacttatcatgatgaacacttgtgttaaaacctgcaaataagttgttcgtccaaacagggcctg 7241527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 22296366 - 22296404
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  22296366 cttgtgctataagctgcaaataagttgtttatctaaaca 22296404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 30180051 - 30180013
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttg 91  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  30180051 agcttatacgaaaacaatttaactttattttatcttttg 30180013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 36517550 - 36517480
Alignment:
Q  115 tacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||| |||| ||||||||||||||  || ||| |||||| |||||||||||||||||| ||||||| ||||    
T  36517550 tacagaagcacttatcatgataagtgctagtgttataagttgcaaataagttgtttattcaaacagagcct 36517480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 40252242 - 40252296
Alignment:
Q  126 ttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| ||||| || |||||||||||||||| ||||| |||||||||||||||    
T  40252242 ttatcataataagaacatgtgctataagctgcatataaggtgtttatccaaacag 40252296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 40689056 - 40689094
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttg 91  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  40689056 agcttatatgaaaataatttaactttattttatcttttg 40689094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 17248483 - 17248434
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    ||||||||||||||| |||||||||||||| || ||||||| ||||||||    
T  17248483 gcttatcatgataagaacttgtgctataagttgtaaataaggtgtttatc 17248434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 22283860 - 22283905
Alignment:
Q  134 ataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||    
T  22283860 ataagcccttgtgctataagttgcacataagttgtttatccaaaca 22283905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 185
Target Start/End: Complemental strand, 40009460 - 40009345
Alignment:
Q  63 aaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaa-t 161  Q
    |||| |||||||||||||||| ||||||||||| ||||        |||||||||| ||||||| ||||||||||| |||| || | ||||||| ||| |    
T  40009460 aaaacaatttaactttattttgtcttttgttataaaaac-------agcttatacataagcgctaatcatgataagtacttatg-tgtaagctgaaaatt 40009369  T
Q  162 aagttgtttatccaaacagtgcct 185  Q
    ||||||||||| ||||||| ||||    
T  40009368 aagttgtttattcaaacagggcct 40009345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 4970917 - 4970985
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaa 177  Q
    |||||||||| || ||||||||||| || | |||| | ||||||||||||||||||  |||||||||||    
T  4970917 agcttatacataaccgcttatcatggtagggactttttctataagctgcaaataagccgtttatccaaa 4970985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 20189153 - 20189201
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    ||||||||||||||||||| ||  |||||||||||||||||||| ||||    
T  20189153 cttatcatgataagcacttatgtcataagctgcaaataagttgtgtatc 20189201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 28210356 - 28210320
Alignment:
Q  149 ataagctgcaaataagttgtttatccaaacagtgcct 185  Q
    |||||||||||||||||||||||||||||||| ||||    
T  28210356 ataagctgcaaataagttgtttatccaaacagggcct 28210320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 39967853 - 39967805
Alignment:
Q  125 cttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||||||||||||| ||||||||||| | || |||||||||||||||||    
T  39967853 cttatcatgataagaacttgtgctatgaacttcaaataagttgtttatc 39967805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 46280403 - 46280459
Alignment:
Q  124 gcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||||| | |||||||||||||||  ||||||  |||||||||||||||    
T  46280403 gcttatcatgataaacgcttgtgctataagctataaataaactgtttatccaaacag 46280459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 11619347 - 11619386
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  11619347 cttgtgcaataatctgcaaataagttgtttatccaaacag 11619386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 19131307 - 19131240
Alignment:
Q  113 tatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||| || |||||||||| ||||   ||||||||||||||| |||| ||| |||||||||||||||    
T  19131307 tatacataaacgcttatcataataattgcttgtgctataagcttcaaacaagctgtttatccaaacag 19131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 40377997 - 40378028
Alignment:
Q  149 ataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||||||||||||||||||    
T  40377997 ataagctgcaaataagttgtttatccaaacag 40378028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 42656515 - 42656397
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgttattaaaaatttaaatagcttatacacaagcgcttatcatgataagcacttgtgctataa 152  Q
    ||||||||| ||||| |||| ||||||||||||||||||||       ||  |||||||||||| | ||| ||||||  |||||||| ||| ||||||||    
T  42656515 agcttatacaaaaatgatttgactttattttatcttttgtt-------atagaaatagcttatatataagtgcttattttgataagcgcttatgctataa 42656423  T
Q  153 gctgcaaat-aagttgtttatccaaa 177  Q
    ||| | ||| ||||||||||| ||||    
T  42656422 gctactaatgaagttgtttattcaaa 42656397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 45004675 - 45004636
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  45004675 cttgtgctataaactgcaaataagttatttatccaaacag 45004636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 46078088 - 46078017
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||||||||||||||||| |   ||||||| |||| |||| ||||| ||||| |||||||||    
T  46078088 agcttatacataagcgcttatcatgatatgtgtttgtgctttaagttgcatataagctgtttgtccaaacag 46078017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 5947098 - 5947031
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| ||| || |||||||||||    |||||||||||||| |||||||| | |||||||||||||    
T  5947098 agcttatacataagtgcctatcatgataa----ttgtgctataagcttcaaataagctatttatccaaacag 5947031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 30571088 - 30571122
Alignment:
Q  145 tgctataagctgcaaataagttgtttatccaaaca 179  Q
    |||||||||||||||||||| ||||||||||||||    
T  30571088 tgctataagctgcaaataagctgtttatccaaaca 30571122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 39279702 - 39279632
Alignment:
Q  120 aagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacagtgcctgaaag 190  Q
    |||| ||||| || |||||| |||||||  |||| | |||||||| ||||||||||||||| |||||||||    
T  39279702 aagcacttattataataagcccttgtgccttaagatacaaataagctgtttatccaaacagggcctgaaag 39279632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 43250796 - 43250870
Alignment:
Q  107 atagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaat-aagttgtttatccaaacag 180  Q
    |||||||||||| ||  |||||||||| ||||  |||  ||||| |||||||||| |||||||||||||||||||    
T  43250796 atagcttatacataaaggcttatcatggtaagtgcttaagctatcagctgcaaataaagttgtttatccaaacag 43250870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 44777097 - 44777151
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaa 159  Q
    |||||| |||| || ||| |||||||||||||| ||||| |||||||||||||||    
T  44777097 aaatagtttatgcataagtgcttatcatgataaacacttatgctataagctgcaa 44777151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 1417263 - 1417222
Alignment:
Q  54 gcttatacgaaaataatttaactttattttatcttttgttat 95  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||    
T  1417263 gcttatatgaaaacaatttgactttattttatcttttgttat 1417222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 2526113 - 2526150
Alignment:
Q  141 cttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  2526113 cttgtgctataagctgcaattaagttgtttacccaaac 2526150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 180
Target Start/End: Original strand, 7512311 - 7512344
Alignment:
Q  147 ctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||||| |||||||||||||||||||||||    
T  7512311 ctataagctgtaaataagttgtttatccaaacag 7512344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 20258431 - 20258394
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  20258431 ttgtgttataagctacaaataagttgtttatccaaaca 20258394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 20269495 - 20269458
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  20269495 ttgtgttataagctacaaataagttgtttatccaaaca 20269458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 28613606 - 28613651
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttattaaaa 100  Q
    ||||||| |||| ||||||||||| |||||||||||||||| ||||    
T  28613606 cttatacaaaaacaatttaactttgttttatcttttgttataaaaa 28613651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 31149639 - 31149606
Alignment:
Q  62 gaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||| ||||||||||||||||||||||    
T  31149639 gaaaataattttactttattttatcttttgttat 31149606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 31167931 - 31167898
Alignment:
Q  62 gaaaataatttaactttattttatcttttgttat 95  Q
    ||||||||||| ||||||||||||||||||||||    
T  31167931 gaaaataattttactttattttatcttttgttat 31167898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 37832254 - 37832335
Alignment:
Q  105 aaatagcttatacacaagcgcttatcatgat-aagcacttgtgctataa-----gctgcaaataagttgtttatccaaacag 180  Q
    |||||| |||||||||||| ||||||||||| |||||||| ||||||||     |||  ||||||||| |||||||||||||    
T  37832254 aaatagtttatacacaagcacttatcatgataaagcacttatgctataatataggctagaaataagttatttatccaaacag 37832335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 38138610 - 38138679
Alignment:
Q  111 cttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    |||||||| || | |||||||||| |||   ||||||||||||  ||||||||| |||||||||||||||    
T  38138610 cttatacataaactcttatcatgacaagtgattgtgctataagacgcaaataagctgtttatccaaacag 38138679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 40428555 - 40428518
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatctttt 90  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  40428555 agcttatatgaaaataatttaactttattttatttttt 40428518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 46945824 - 46945775
Alignment:
Q  131 atgataagcacttgtgctataagctgcaaa-taagttgtttatccaaaca 179  Q
    ||||||||| |||  ||||||||||||||| |||||||||||||||||||    
T  46945824 atgataagcgcttaagctataagctgcaaactaagttgtttatccaaaca 46945775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 47303529 - 47303492
Alignment:
Q  13 tattttcataagttcattgagatagcttacgaaaacag 50  Q
    |||||||||||||||||  |||||||||||||||||||    
T  47303529 tattttcataagttcatcaagatagcttacgaaaacag 47303492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 425965 - 426017
Alignment:
Q  134 ataagcacttgtgctataagctgcaaa-taagttgtttatccaaacagtgcct 185  Q
    |||||| ||| |||||||||||||||| |||||| ||||||||||||| ||||    
T  425965 ataagcgcttatgctataagctgcaaaataagttatttatccaaacagggcct 426017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 21201593 - 21201561
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttt 89  Q
    ||||||||||||||||||| |||||||||||||    
T  21201593 tatacgaaaataatttaacgttattttatcttt 21201561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 22296301 - 22296333
Alignment:
Q  56 ttatacgaaaataatttaactttattttatctt 88  Q
    ||||| |||||||||||||||||||||||||||    
T  22296301 ttataggaaaataatttaactttattttatctt 22296333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 30134049 - 30134009
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    |||||||||||||| || || ||||||||||||||||||||    
T  30134049 agcttatacgaaaacaagttgactttattttatcttttgtt 30134009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 32544861 - 32544897
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaac 178  Q
    |||||||||| || |||||||||||||||||||||||    
T  32544861 ttgtgctatatgccgcaaataagttgtttatccaaac 32544897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 39591539 - 39591579
Alignment:
Q  55 cttatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||||| ||||| ||||| ||||||||||||||||||||||    
T  39591539 cttatatgaaaacaatttgactttattttatcttttgttat 39591579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 43152982 - 43153014
Alignment:
Q  63 aaaataatttaactttattttatcttttgttat 95  Q
    |||| ||||||||||||||||||||||||||||    
T  43152982 aaaacaatttaactttattttatcttttgttat 43153014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 43250749 - 43250789
Alignment:
Q  53 agcttatacgaaaataatttaactttattttatcttttgtt 93  Q
    ||||||||||||||  | |||||||||||||||||||||||    
T  43250749 agcttatacgaaaaacaattaactttattttatcttttgtt 43250789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 46407123 - 46407079
Alignment:
Q  136 aagcacttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||  |||||||||| ||||||||||||||||| ||||||    
T  46407123 aagcactttagctataagctacaaataagttgtttatcaaaacag 46407079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 58540 - 58475
Alignment:
Q  114 atacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaaca 179  Q
    ||||| ||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  58540 atacataagtgcttattatgacaagcacttgtgctctaagctgcaaataagttgtttatccaaaca 58475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 207710 - 207774
Alignment:
Q  109 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatc 173  Q
    |||||||||| ||| ||||||||||||||||||||||| ||| |  ||||||||||| |||||||    
T  207710 agcttatacataagtgcttatcatgataagcacttgtggtatcacatgcaaataagtggtttatc 207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 21347 - 21385
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatctttt 90  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  21347 cagcttatacgaaaacaatttaactttattttatctttt 21385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 58938 - 58900
Alignment:
Q  52 cagcttatacgaaaataatttaactttattttatctttt 90  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  58938 cagcttatacgaaaacaatttaactttattttaactttt 58900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 158015 - 157977
Alignment:
Q  142 ttgtgctataagctgcaaataagttgtttatccaaacag 180  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  158015 ttgtgctataagctgcaaataagctgtttatccaaacag 157977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 1798 - 1836
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  1798 tatatgaaaataaattaactttattttatcttttgttat 1836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 3888 - 3926
Alignment:
Q  57 tatacgaaaataatttaactttattttatcttttgttat 95  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  3888 tatatgaaaataaattaactttattttatcttttgttat 3926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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