View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9721_low_21 (Length: 203)
Name: NF9721_low_21
Description: NF9721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9721_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 9624800 - 9624972
Alignment:
| Q |
14 |
cagagactgaggttgatgctaatgtgttggcacaagattatgctgatgatgatgaagtagatgaaacaacattgacaacaaatgaagaattagcaaatac |
113 |
Q |
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| T |
9624800 |
cagaaactgaggttgatgctaatgtgttggcacaagattatgctgatgatgatgaagtagatgaaacaacattgacaacaaatgaagaattagcaaatac |
9624899 |
T |
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| Q |
114 |
agaagaactaaacagaaaatttgaagaattcataaggaaaatgaaagaggagatgaggattgaagctcaaaca |
186 |
Q |
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| T |
9624900 |
agaagaactaaacagaaaatttgaagaattcataaggaaaatgaaagaggagatgaggattgaagctcaaaca |
9624972 |
T |
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