View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9723_high_10 (Length: 311)
Name: NF9723_high_10
Description: NF9723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9723_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 35697537 - 35697255
Alignment:
| Q |
19 |
caacatccccaaatgaatcaaatttctatttctaatccaaactatatatgcatcacaaccattaaaattaccaattaattttacaacaagcacctcatca |
118 |
Q |
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| T |
35697537 |
caacatccccaaatgaatcaaatttctatttctaatccaaactatatatgaatcacaaccataaaaattaccaattaattttacaacaagcacctcatca |
35697438 |
T |
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| Q |
119 |
aatataagacgattcataagttagttcagagtcagcaacacgaggcttattagtgctaccactcttcttatggttaccccctccacaagttattgaaatc |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
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| T |
35697437 |
aatataagacgattcataagttagttcagagtcagcaacacgaggtttattagtgctaccactcttcttatggttaccccctccgcaagttatcgaaatc |
35697338 |
T |
|
| Q |
219 |
tcacaccctaatgctgttccaaagcacgaaaacaaaccgctaccttgccttcgatgcttacctttacctttccctttcctttg |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |
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| T |
35697337 |
tcacaccctaatgctgttccaaagcacgaaaacaaaccgctaccttgccttcgattcttacctttacctttccctttcgtttg |
35697255 |
T |
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