View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9723_low_11 (Length: 319)
Name: NF9723_low_11
Description: NF9723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9723_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 42732666 - 42732373
Alignment:
| Q |
17 |
actatatacaactatgttccataaatattgattatttattgatgtcatgtagtaatcagaccataataacgcatgcaatgcaacaatataagcattccct |
116 |
Q |
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| T |
42732666 |
actatatacaactatgttccataaatattgattatttattgatgtcatgtagtaatcagaccataataacgcatgcaatgcaataatataagcattccct |
42732567 |
T |
|
| Q |
117 |
atagagaaggacaatgagtcagagcttatagtaataggttatacaagtgacaacgaagaggctctttctcaggagtaattggggcctaatggactgttct |
216 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42732566 |
atagagaaggacaatgagtcagagcttatagtaatagattatacaagtgacaacgaagaggctctttctcaggagtaattggggcctaatggactgttct |
42732467 |
T |
|
| Q |
217 |
attgggtctcagcccttaatgtatagtgttggtacgtctagatcaattcaacagtgacacgtgcagtttacttaattccattaccattctctgc |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
42732466 |
attgggtctcagcccttaatgtatagtgttggtacgtctagatcaattcaacagtgacacgtgcagtttacttaattccatcaccattctctgc |
42732373 |
T |
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