View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9725_7 (Length: 354)

Name: NF9725_7
Description: NF9725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9725_7
NF9725_7
[»] chr1 (43 HSPs)
chr1 (203-354)||(13120774-13120927)
chr1 (208-354)||(17674267-17674415)
chr1 (203-354)||(22386744-22386898)
chr1 (203-354)||(44836633-44836782)
chr1 (208-354)||(24556809-24556957)
chr1 (213-354)||(42740113-42740256)
chr1 (203-354)||(37873665-37873823)
chr1 (294-354)||(50371137-50371197)
chr1 (51-138)||(24557023-24557110)
chr1 (203-354)||(27703437-27703590)
chr1 (294-354)||(12884138-12884198)
chr1 (294-354)||(12971409-12971469)
chr1 (294-354)||(18127938-18127998)
chr1 (294-354)||(33124631-33124691)
chr1 (51-138)||(17674110-17674197)
chr1 (208-283)||(26486286-26486361)
chr1 (294-348)||(6150730-6150784)
chr1 (44-138)||(37873505-37873599)
chr1 (294-354)||(5560486-5560546)
chr1 (294-354)||(10109723-10109783)
chr1 (294-354)||(25930607-25930667)
chr1 (294-354)||(30899659-30899719)
chr1 (294-354)||(48722371-48722431)
chr1 (294-354)||(50552498-50552558)
chr1 (44-138)||(42740326-42740420)
chr1 (294-348)||(51110102-51110156)
chr1 (294-348)||(52055561-52055615)
chr1 (208-354)||(10-160)
chr1 (297-354)||(38263867-38263924)
chr1 (294-354)||(20905288-20905348)
chr1 (294-354)||(30004908-30004968)
chr1 (297-348)||(14084705-14084756)
chr1 (300-354)||(3907474-3907528)
chr1 (294-354)||(28885672-28885732)
chr1 (294-354)||(29208099-29208159)
chr1 (294-348)||(17487284-17487338)
chr1 (56-134)||(22386597-22386675)
chr1 (312-354)||(32810370-32810412)
chr1 (45-138)||(26486125-26486218)
chr1 (294-334)||(1269574-1269614)
chr1 (294-348)||(9777422-9777477)
chr1 (294-354)||(15441293-15441354)
chr1 (294-346)||(6333517-6333569)
[»] chr5 (34 HSPs)
chr5 (208-354)||(17325847-17325996)
chr5 (208-354)||(18873460-18873611)
chr5 (203-283)||(10033623-10033702)
chr5 (232-354)||(138147-138270)
chr5 (52-129)||(17326075-17326152)
chr5 (294-354)||(42291882-42291942)
chr5 (203-353)||(7390309-7390460)
chr5 (294-354)||(13656213-13656273)
chr5 (50-138)||(16515726-16515814)
chr5 (294-354)||(19099315-19099375)
chr5 (294-354)||(20975988-20976048)
chr5 (294-354)||(43511621-43511681)
chr5 (294-350)||(3349730-3349786)
chr5 (294-354)||(10591274-10591334)
chr5 (294-354)||(12661312-12661372)
chr5 (294-354)||(13474633-13474693)
chr5 (294-354)||(16515527-16515587)
chr5 (294-354)||(17513937-17513997)
chr5 (294-354)||(29156193-29156253)
chr5 (294-354)||(40956316-40956376)
chr5 (294-354)||(4734583-4734643)
chr5 (294-354)||(13423867-13423927)
chr5 (294-354)||(26377775-26377835)
chr5 (294-354)||(5829388-5829446)
chr5 (50-138)||(7390156-7390244)
chr5 (296-354)||(36718570-36718628)
chr5 (301-354)||(33281677-33281730)
chr5 (302-354)||(27351352-27351404)
chr5 (48-138)||(8379197-8379286)
chr5 (51-92)||(931636-931677)
chr5 (45-137)||(3349479-3349571)
chr5 (297-334)||(10033570-10033607)
chr5 (208-268)||(16515596-16515656)
chr5 (294-354)||(40779195-40779254)
[»] chr7 (36 HSPs)
chr7 (208-354)||(36438264-36438412)
chr7 (203-354)||(7366690-7366843)
chr7 (203-354)||(26633366-26633519)
chr7 (203-354)||(40737908-40738052)
chr7 (232-354)||(18895334-18895458)
chr7 (294-354)||(26282543-26282603)
chr7 (294-354)||(40001697-40001757)
chr7 (294-354)||(33910067-33910127)
chr7 (56-138)||(7370013-7370094)
chr7 (294-354)||(4099971-4100031)
chr7 (294-354)||(7636327-7636387)
chr7 (294-354)||(9479130-9479190)
chr7 (294-354)||(18015583-18015643)
chr7 (294-354)||(36796373-36796433)
chr7 (294-346)||(46221704-46221756)
chr7 (294-348)||(12251289-12251343)
chr7 (208-348)||(32956784-32956927)
chr7 (294-354)||(773885-773945)
chr7 (294-354)||(6380085-6380145)
chr7 (294-354)||(11672589-11672649)
chr7 (296-348)||(30739132-30739184)
chr7 (294-346)||(41908189-41908241)
chr7 (294-354)||(44894030-44894090)
chr7 (295-354)||(42312012-42312071)
chr7 (294-348)||(1366018-1366072)
chr7 (294-348)||(8358295-8358349)
chr7 (57-113)||(40737760-40737816)
chr7 (208-283)||(40841157-40841233)
chr7 (298-354)||(42161125-42161181)
chr7 (297-354)||(33419121-33419179)
chr7 (294-346)||(44876156-44876208)
chr7 (303-346)||(25061914-25061957)
chr7 (60-138)||(36438117-36438194)
chr7 (295-348)||(41852302-41852355)
chr7 (56-92)||(4100228-4100264)
chr7 (50-137)||(40001466-40001553)
[»] chr3 (36 HSPs)
chr3 (209-354)||(50677228-50677375)
chr3 (203-354)||(46904745-46904898)
chr3 (229-354)||(36538120-36538247)
chr3 (203-354)||(42009170-42009323)
chr3 (203-354)||(7767066-7767222)
chr3 (211-354)||(51146941-51147085)
chr3 (203-354)||(27303190-27303341)
chr3 (294-348)||(25599087-25599141)
chr3 (294-354)||(41707056-41707116)
chr3 (294-354)||(51939557-51939617)
chr3 (208-354)||(52655034-52655184)
chr3 (294-354)||(13401462-13401522)
chr3 (294-354)||(28132736-28132796)
chr3 (294-354)||(46791698-46791758)
chr3 (294-354)||(48627030-48627090)
chr3 (294-354)||(8364175-8364235)
chr3 (294-354)||(18408194-18408254)
chr3 (294-354)||(21784785-21784845)
chr3 (294-354)||(29387755-29387815)
chr3 (50-138)||(46904963-46905051)
chr3 (45-110)||(27303436-27303501)
chr3 (294-354)||(40152130-40152191)
chr3 (50-138)||(7767287-7767375)
chr3 (294-354)||(23164573-23164633)
chr3 (294-354)||(21596338-21596398)
chr3 (294-354)||(24252623-24252683)
chr3 (302-354)||(54430555-54430607)
chr3 (51-138)||(42009039-42009126)
chr3 (45-92)||(51147205-51147252)
chr3 (305-354)||(1649843-1649892)
chr3 (297-354)||(19965884-19965941)
chr3 (294-354)||(20762052-20762112)
chr3 (298-354)||(23067730-23067786)
chr3 (238-283)||(15987276-15987321)
chr3 (294-354)||(27729770-27729830)
chr3 (45-93)||(48626779-48626827)
[»] chr8 (30 HSPs)
chr8 (203-354)||(3628655-3628808)
chr8 (209-339)||(36515069-36515202)
chr8 (294-354)||(3471603-3471663)
chr8 (203-354)||(32098085-32098239)
chr8 (294-354)||(34523952-34524012)
chr8 (294-346)||(5869323-5869375)
chr8 (294-354)||(12531562-12531622)
chr8 (294-354)||(18112119-18112179)
chr8 (294-354)||(18420610-18420670)
chr8 (294-354)||(23567275-23567335)
chr8 (208-284)||(42076185-42076260)
chr8 (294-354)||(43926324-43926384)
chr8 (294-354)||(1004061-1004122)
chr8 (294-354)||(13585302-13585362)
chr8 (294-354)||(43968071-43968131)
chr8 (44-113)||(35875147-35875216)
chr8 (294-354)||(27074577-27074637)
chr8 (294-354)||(35874929-35874989)
chr8 (294-354)||(39697939-39697999)
chr8 (298-354)||(42951774-42951830)
chr8 (208-283)||(29372433-29372508)
chr8 (294-348)||(30915288-30915343)
chr8 (59-138)||(42076330-42076408)
chr8 (294-354)||(7858088-7858148)
chr8 (294-354)||(44665047-44665107)
chr8 (50-93)||(33453021-33453064)
chr8 (59-105)||(18112378-18112424)
chr8 (45-119)||(36514905-36514978)
chr8 (300-354)||(42076111-42076165)
chr8 (294-354)||(29372360-29372420)
[»] chr2 (35 HSPs)
chr2 (203-354)||(13997317-13997469)
chr2 (203-354)||(29480545-29480698)
chr2 (203-354)||(1418912-1419065)
chr2 (209-354)||(38599405-38599551)
chr2 (231-354)||(39081401-39081525)
chr2 (39-138)||(13997534-13997633)
chr2 (294-354)||(19367420-19367480)
chr2 (294-354)||(41096539-41096599)
chr2 (211-354)||(36059821-36059966)
chr2 (208-354)||(26151658-26151808)
chr2 (294-354)||(2063808-2063868)
chr2 (294-354)||(6530662-6530722)
chr2 (294-354)||(15457503-15457563)
chr2 (209-281)||(38599593-38599665)
chr2 (50-138)||(39081617-39081704)
chr2 (294-354)||(4855996-4856056)
chr2 (294-354)||(7993635-7993695)
chr2 (294-354)||(13020426-13020486)
chr2 (294-354)||(18172941-18173001)
chr2 (294-354)||(18676312-18676372)
chr2 (294-354)||(21747231-21747291)
chr2 (294-354)||(38985710-38985770)
chr2 (294-339)||(17117646-17117691)
chr2 (298-354)||(18916059-18916115)
chr2 (294-354)||(27302529-27302589)
chr2 (294-342)||(34061857-34061905)
chr2 (294-354)||(42411559-42411619)
chr2 (294-354)||(45618980-45619039)
chr2 (294-354)||(45042392-45042455)
chr2 (294-354)||(25222326-25222386)
chr2 (61-96)||(1419172-1419207)
chr2 (45-128)||(29480386-29480469)
chr2 (295-354)||(31273168-31273227)
chr2 (294-339)||(42759757-42759802)
chr2 (50-138)||(36059660-36059748)
[»] chr6 (24 HSPs)
chr6 (203-354)||(3748476-3748629)
chr6 (203-332)||(6294279-6294410)
chr6 (294-354)||(628096-628156)
chr6 (294-354)||(2618358-2618418)
chr6 (294-354)||(12614717-12614777)
chr6 (294-354)||(31861004-31861064)
chr6 (203-354)||(21946110-21946261)
chr6 (294-348)||(29401149-29401203)
chr6 (211-354)||(30915277-30915427)
chr6 (294-354)||(6754209-6754269)
chr6 (294-354)||(14893418-14893478)
chr6 (302-348)||(22503752-22503798)
chr6 (294-348)||(29308468-29308522)
chr6 (208-354)||(29149406-29149556)
chr6 (294-354)||(57691-57751)
chr6 (294-354)||(1690634-1690694)
chr6 (294-354)||(6360763-6360822)
chr6 (294-354)||(7525167-7525227)
chr6 (294-354)||(3514851-3514911)
chr6 (57-138)||(3748329-3748411)
chr6 (294-345)||(19231624-19231675)
chr6 (294-348)||(1093042-1093095)
chr6 (312-354)||(31234914-31234956)
chr6 (56-92)||(22504011-22504047)
[»] chr4 (29 HSPs)
chr4 (203-354)||(35653888-35654041)
chr4 (294-354)||(32130791-32130851)
chr4 (294-354)||(41038253-41038313)
chr4 (208-354)||(22423687-22423837)
chr4 (203-348)||(21791456-21791602)
chr4 (294-354)||(23426167-23426227)
chr4 (294-354)||(34982227-34982287)
chr4 (294-354)||(45172646-45172706)
chr4 (209-348)||(10575437-10575578)
chr4 (294-354)||(19661382-19661442)
chr4 (294-354)||(44478042-44478102)
chr4 (294-354)||(53011715-53011775)
chr4 (208-354)||(5545332-5545481)
chr4 (294-348)||(11681743-11681797)
chr4 (294-348)||(11690022-11690076)
chr4 (294-348)||(55134217-55134271)
chr4 (44-113)||(24449347-24449416)
chr4 (294-354)||(24449129-24449189)
chr4 (298-354)||(27632401-27632457)
chr4 (294-354)||(28463589-28463649)
chr4 (294-354)||(43154789-43154849)
chr4 (303-354)||(16072597-16072648)
chr4 (294-354)||(23256597-23256657)
chr4 (294-354)||(29579883-29579943)
chr4 (50-138)||(35653735-35653823)
chr4 (294-354)||(29221622-29221682)
chr4 (56-94)||(22423938-22423976)
chr4 (45-133)||(23256825-23256911)
chr4 (208-283)||(41038327-41038403)
[»] scaffold0126 (1 HSPs)
scaffold0126 (296-354)||(16713-16771)
[»] scaffold0181 (1 HSPs)
scaffold0181 (294-354)||(17133-17193)
[»] scaffold0606 (1 HSPs)
scaffold0606 (297-354)||(8399-8456)
[»] scaffold0100 (1 HSPs)
scaffold0100 (294-354)||(46174-46234)
[»] scaffold0564 (2 HSPs)
scaffold0564 (208-283)||(1138-1214)
scaffold0564 (294-332)||(1086-1124)
[»] scaffold0035 (2 HSPs)
scaffold0035 (297-332)||(22809-22844)
scaffold0035 (208-283)||(22716-22792)


Alignment Details
Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 13120774 - 13120927
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgt 300  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||            |||| ||    
T  13120774 gagaggtgaaatttacctaacggtgtcgtttggaatgtcactcctacgtcgtaggaaaggggaaaatgaatggtttatgcgaaaaagaaataattgtggt 13120873  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13120874 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 13120927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 208 - 354
Target Start/End: Original strand, 17674267 - 17674415
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgtgattc 305  Q
    |||||||||||||||||||  | ||||||||||||||| ||||||||||||||||||||||| |||||||||||||            ||||||||||||    
T  17674267 gtgaaatttacctaacggtgtcatttggaatgtcactcttacgtcgtaggaaaggggaaaacaaatggtttatgcgaaaaagaaataattgttgtgattc 17674366  T
Q  306 tttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17674367 tttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 17674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 22386744 - 22386898
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnnt---tgttg 299  Q
    |||| ||||||||||  ||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||           |   |||||    
T  22386744 gagatgtgaaatttatttaacgatgtcgtttggaatgtcactcctacgtcgtaggaaaggggaaaacaaatggtttatgcaaaaaaaatattaattgttg 22386843  T
Q  300 tgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22386844 tgattctttcaatgaaatagtttttcaaattgactgattaagtgattgttcaaat 22386898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 44836633 - 44836782
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnnttgttgtga 302  Q
    |||| |||||||||||||| ||||  | |||||||||||||||||||||||| |||||||| |||||||||||||||||||           || |||||    
T  44836633 gagatgtgaaatttacctagcggtgtcatttggaatgtcactcctacgtcgtgggaaagggaaaaacgaatggtttatgcg--aaaaagaaatgatgtga 44836730  T
Q  303 ttctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  44836731 ttctttcagtgaaatagtttttcaaattgactgattaagtgattatacaaat 44836782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 208 - 354
Target Start/End: Complemental strand, 24556957 - 24556809
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgtgattc 305  Q
    |||||||||||||||||||  |||||||||||||||||||||||  |||||||  | |||||||||||||||||||            ||||||||||||    
T  24556957 gtgaaatttacctaacggtgtcgtttggaatgtcactcctacgtgataggaaaaagaaaaacgaatggtttatgcgaaaaagaaataattgttgtgattc 24556858  T
Q  306 tttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  24556857 tttaaatgaaatagtttttcaaattgacttattaagtgattattcaaat 24556809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 213 - 354
Target Start/End: Complemental strand, 42740256 - 42740113
Alignment:
Q  213 atttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgtgattctttca 310  Q
    ||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||||| |||||||||            |||||| ||||||||||    
T  42740256 atttacctaacagtttcatttggaatgtcactcctacgtcgtaggaaaggggaaaacgaattgtttatgcgaaaaagaaataattgttgcgattctttca 42740157  T
Q  311 atgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  42740156 atgaaatagtttttcaaattgactaattaagttattatacaaat 42740113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 37873665 - 37873823
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgta-----ggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--tt 295  Q
    |||| ||||||||||| |||| ||  ||||||| |||||||||||||||||||     ||||||||||||||||||||||||||| |           ||    
T  37873665 gagaggtgaaatttacgtaacagtgtcgtttggcatgtcactcctacgtcgtatcgtaggaaaggggaaaacgaatggtttatgcagaaaagaaataatt 37873764  T
Q  296 gttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||    
T  37873765 gttgtgattctttcaatgaaacagtttttcaaattaactgattaagtgactatacaaat 37873823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 50371197 - 50371137
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  50371197 ttgttgtgattctttcaatgaaacagtttttcaaattgactgattaagtgattatacaaat 50371137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 24557110 - 24557023
Alignment:
Q  51 cgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||||||| || | ||| ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||    
T  24557110 cgtttatatgaaatatgatgctcgattctatttttaaaataggtcctagtaaaatcaaaacgcaattctttttgtgtagctaagcttc 24557023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 27703437 - 27703590
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgt 300  Q
    |||| |||||||||||||||| ||  |||||||| |||||||| | ||| || | |||||| |||||||||||||||||||            |||||||    
T  27703437 gagaggtgaaatttacctaacagtgtcgtttggattgtcactcttccgtggtggaaaagggaaaaacgaatggtttatgcgaaaatgaaatgattgttgt 27703536  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||    
T  27703537 gattctttcgatgaaatagctttccaaattgactgattaagtgattatacaaat 27703590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 12884138 - 12884198
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  12884138 ttgttgtgattctttcaatgaaatagctttttaaattgactgattaagtgattatacaaat 12884198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 12971469 - 12971409
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  12971469 ttgttgtgattctttcgatgaaatagcttttcaaattgactgattaagtgattatacaaat 12971409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 18127938 - 18127998
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  18127938 ttgttgtgattcttgcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 18127998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 33124631 - 33124691
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  33124631 ttgttgtgattctttcaatgaaatagcttttcaaattgacttattaagtgattatacaaat 33124691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 17674110 - 17674197
Alignment:
Q  51 cgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    |||| |||||||||| ||||||||  ||||||||||||||||| || || ||||||||||| ||||||||| ||||||||||| ||||    
T  17674110 cgttcctatgaaataagaggttcgactctatttttaaaataggctccagtaaaatcaaaacacaattctttttgtgtagttaaacttc 17674197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 26486286 - 26486361
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg 283  Q
    |||||||||||| ||||||  | |||||||||||||| |||||||||||||||| ||||||||||| |||||||||    
T  26486286 gtgaaatttaccaaacggtgtcatttggaatgtcacttctacgtcgtaggaaagaggaaaacgaatagtttatgcg 26486361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 6150784 - 6150730
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  6150784 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaaatgattat 6150730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 37873505 - 37873599
Alignment:
Q  44 gcaggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||  | || ||||| |||| | |||| ||| ||||||||||||||||    
T  37873505 gcagggccgtttctatgaaataggaggctcgattctatttttaaaataggccccagtaaaataaaaatgtaattttttgtgtgtagttaagcttc 37873599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 5560546 - 5560486
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  5560546 ttgttgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaat 5560486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 10109783 - 10109723
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  10109783 ttgttgtgattctttcaatgaaattgctttccaaattgactgattaagtgattatacaaat 10109723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 25930667 - 25930607
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  25930667 ttgttgtgatcctttcaatgaaatagcttttcaagttgactgattaagtgattatacaaat 25930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 30899719 - 30899659
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  30899719 ttgttgtgattctttcaatgaaatagctttccaaattgactaattaagtgattatacaaat 30899659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 48722371 - 48722431
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  48722371 ttgttgtgattatttcaatgaaatagctttccaaattgactgattaagtgattatacaaat 48722431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 50552558 - 50552498
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||||||| |||||    
T  50552558 ttgttgtgattctttcaatgaaataacttttcaaattgaccgattaagtgattatacaaat 50552498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 42740420 - 42740326
Alignment:
Q  44 gcaggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||||||||||  | || ||||| |||||| |||| ||| ||||| ||||| ||||    
T  42740420 gcagggccgttcctatgaaataggaggctcggttctatttttaaaataggccccagtaaaataaaaacgtaattttttttgtgtggttaaacttc 42740326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 51110102 - 51110156
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  51110102 ttgttgtgattctttcaatgaaatagctttctaaattgactgattaagtgattat 51110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 52055615 - 52055561
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  52055615 ttgttgtgattctttcaatgaaatagctttccaaattgattgattaagtgattat 52055561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 354
Target Start/End: Complemental strand, 160 - 10
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnnt---tgttgtgat 303  Q
    |||||||||| ||||||||  |||||||| | |||||||||  || |||| |||||| |||||||||||||||||||          |   |||||||||    
T  160 gtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtagaaaagggtaaaacgaatggtttatgcgaagaaaaaaatgattgttgtgat 61  T
Q  304 tctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||   ||| |||||||||||||||||||||||| |||||    
T  60 tctttcaatgaaatcactttccaaattgactgattaagtgattatacaaat 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 38263924 - 38263867
Alignment:
Q  297 ttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||    
T  38263924 ttgtgattctatcaatgaaatagttttttaaattgactgattaagtaataattcaaat 38263867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 20905288 - 20905348
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||||  || |||||||||||| ||||||||||| |||||    
T  20905288 ttgttgtgattctttcaatgaaatagacttccaaattgactgaataagtgattatacaaat 20905348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 30004908 - 30004968
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||| ||||||||||||||||||| |||||||||| | ||||||||||||||| |||||    
T  30004908 ttgttgcgattctttcaatgaaatagcttttcaaattaattgattaagtgattatacaaat 30004968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 14084705 - 14084756
Alignment:
Q  297 ttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  14084705 ttgtgattctttcaatgaaatagctttctaaattgactgattaagtgattat 14084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 3907528 - 3907474
Alignment:
Q  300 tgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||    
T  3907528 tgattctttcaatgaaataatttttcaaattgattgattaaatgattatacaaat 3907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 28885672 - 28885732
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||| ||||||||||| |||  ||||||| ||||||||||||||| |||||    
T  28885672 ttgttgtgattcttacaatgaaatagctttcaaaattgattgattaagtgattatacaaat 28885732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 29208099 - 29208159
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||||  || || ||||||||||||| ||||||| |||||    
T  29208099 ttgttgtgattctttcaatgaaatagacttccagattgactgattaaatgattatacaaat 29208159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 17487284 - 17487338
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||||||||||||  ||| |||||||| | |||||||||||||    
T  17487284 ttgttgtgattctttcaatgaaataactttccaaattgatttattaagtgattat 17487338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 22386597 - 22386675
Alignment:
Q  56 ctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaag 134  Q
    ||||||||||||||| |||||| |||||||||||||||    || |||||||||| |||||| ||| | ||||||||||    
T  22386597 ctatgaaataggaggctcggttttatttttaaaataggccgcagtaaaatcaaaatgcaattttttttttgtagttaag 22386675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 354
Target Start/End: Original strand, 32810370 - 32810412
Alignment:
Q  312 tgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  32810370 tgaaatagcttttcaaattgattgattaagtgattattcaaat 32810412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 26486125 - 26486218
Alignment:
Q  45 caggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    |||| ||||| |||| |||||||||| ||||||||||||| ||||||||  | || ||||| |||| ||| || ||| ||||||| ||||||||    
T  26486125 cagggccgttcctataaaataggaggctcggttctattttcaaaataggcccgagtaaaataaaaatgcatttttttgtgtgtagctaagcttc 26486218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 1269614 - 1269574
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgact 334  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  1269614 ttgttgtgattcttttaatgaaatagcttttcaaattgact 1269574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 9777477 - 9777422
Alignment:
Q  294 ttgttgtgattctttcaat-gaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||  || ||||||||| |||||||||||||||| |||||||||    
T  9777477 ttgttgtgattctttttattgaaatagttattcaaattgactgattgagtgattat 9777422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 15441354 - 15441293
Alignment:
Q  294 ttgttgtgattctttc-aatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||  |||||||||| |||  ||||||| ||||||||||||||| |||||    
T  15441354 ttgttgtgattctttttaatgaaatagctttataaattgagtgattaagtgattatacaaat 15441293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 6333517 - 6333569
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgatt 346  Q
    ||||||||||||||| ||| |||||  ||| ||| ||||||||||||||||||    
T  6333517 ttgttgtgattcttttaataaaataactttccaatttgactgattaagtgatt 6333569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 208 - 354
Target Start/End: Complemental strand, 17325996 - 17325847
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgtgattc 305  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||            ||||||||||||    
T  17325996 gtgaaatttacctaacggtgtcgtttggaatgtcactcctacgtcgtaggaaaggggaaagcgaatggtttatgcgaaaaagaaataattgttgtgattc 17325897  T
Q  306 tttcaatgaaatag-tttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17325896 tttcaatgaaatagttttttcaaattgactgattaagtgattattcaaat 17325847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 208 - 354
Target Start/End: Complemental strand, 18873611 - 18873460
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacg---aatggtttatgcg--gnnnnnnnnnttgttgtga 302  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||            |||||||||    
T  18873611 gtgaaatttacctaacggtttcgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaataatggtttatgcgaaaaagaaataattgttgtga 18873512  T
Q  303 ttctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||| ||||||||||| ||||||||||| |||| |||||    
T  18873511 ttctttcaatgaaatagcttttcaaattggctgattaagtggttatacaaat 18873460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 10033702 - 10033623
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg 283  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10033702 gagaggtgaaatttacctaacggtttcgtttggaatgtcactcctacgtcgtaggaaa-gggaaaacgaatggtttatgcg 10033623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 232 - 354
Target Start/End: Complemental strand, 138270 - 138147
Alignment:
Q  232 ttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgtgattctttcaatgaaatagtttttcaaat 329  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||||||||||           ||||||||||| |||||||||||||| |||||||||    
T  138270 ttggaatgtcactactacttcgtag-aaaggggaaaacgaatggtttatgcggaaaaaaaataattgttgtgattatttcaatgaaatagcttttcaaat 138172  T
Q  330 tgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||    
T  138171 tgactgattaagtgattatacaaat 138147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 17326152 - 17326075
Alignment:
Q  52 gtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtag 129  Q
    |||||||||||||| |||| |||||||||||||||||||||| || || ||||||||||||||||||||| |||||||    
T  17326152 gtttctatgaaatatgaggctcggttctatttttaaaataggctccagtaaaatcaaaacgcaattctttttgtgtag 17326075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 42291882 - 42291942
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  42291882 ttgttgtgattctttcaatgaaatagattttcaaattgactgattaagtgattatacaaat 42291942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 203 - 353
Target Start/End: Original strand, 7390309 - 7390460
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgt 300  Q
    |||| |||||||||| ||||||||  |||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||            |||| ||    
T  7390309 gagaggtgaaatttatctaacggtgtcgtttg-aatgtcacttctatgtcgcaggaaaggggaaaacgaatggtttatgcgaaaaagaaataattgtcgt 7390407  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaa 353  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||||||| ||||    
T  7390408 gattctttcgatgaaataactttttaaattgactgattaagtgattatacaaa 7390460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 13656273 - 13656213
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  13656273 ttgttgtgattctttcaatgaaataacttttcaaattgactgattaagtgattatacaaat 13656213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 16515814 - 16515726
Alignment:
Q  50 ccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  | || ||||| |||||||| || ||| ||||||| ||||||||    
T  16515814 ccgttcctatgaaataggaggttcggttctatttttaaaataggcccgagtaaaataaaaacgcatttttttgtgtgtagctaagcttc 16515726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 19099315 - 19099375
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  19099315 ttgttgtgattctttcaatgaaatagctttttaaattgactgattaagtgattatacaaat 19099375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 20976048 - 20975988
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||    
T  20976048 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaaatgattatacaaat 20975988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 43511681 - 43511621
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  43511681 ttgttgtgattctttccatgaaatagcttttcaaattgactgattaagtgattatacaaat 43511621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 350
Target Start/End: Original strand, 3349730 - 3349786
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattc 350  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||    
T  3349730 ttgttgtgattctttctatgaaatagcttttcaaattgactgattaagtcattattc 3349786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 10591274 - 10591334
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||| |||||    
T  10591274 ttgttgtgattctttcaatgaaataacttttcaaattaactgattaagtgattatacaaat 10591334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 12661372 - 12661312
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| |||||    
T  12661372 ttgttgtgattctttcaatgaaatagctttccaaattgactggttaagtgattatacaaat 12661312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 13474693 - 13474633
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  13474693 ttgttgtgattctttcaatgaaacaacttttcaaattgactgattaagtgattatacaaat 13474633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 16515587 - 16515527
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| ||||    
T  16515587 ttgttgtgattctttcaataaaataatttttcaaattgattgattaagtgattattaaaat 16515527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 17513937 - 17513997
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||    
T  17513937 ttgttgtgattctttcagtgaaataacttttcaaattgactgattaagtgattatacaaat 17513997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 29156253 - 29156193
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  29156253 ttgttgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaat 29156193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 40956376 - 40956316
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| |||||    
T  40956376 ttgttgtgattcttttaatgaaatagtttttcaaattaaatgattaagtgattatacaaat 40956316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 4734583 - 4734643
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||| |||| ||| |||||| |||||    
T  4734583 ttgttgtgattctttcaatgaaatagattttcaaattgagtgatcaagggattatacaaat 4734643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 13423927 - 13423867
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||  ||||||| ||||||||||||||| |||||    
T  13423927 ttgttgtgattctttcaatgaaatagctttctaaattgattgattaagtgattatacaaat 13423867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 26377775 - 26377835
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| || ||| ||||||||| ||||||||||| |||||    
T  26377775 ttgttgtgattctttcaatgaaatagcttctcacattgactgaataagtgattatacaaat 26377835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 5829446 - 5829388
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| |||||||||| |||  ||||||||||||||||||||||| |||||    
T  5829446 ttgttgtgattcttttaatgaaatagcttt--aaattgactgattaagtgattatacaaat 5829388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 7390156 - 7390244
Alignment:
Q  50 ccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||   |||  ||||| |||||| |||| ||| ||||||| ||||||||    
T  7390156 ccgttcctatgaaatagaaggctcggttctatttttaaaatagtccctaataaaataaaaacgtaattttttgtgtgtagctaagcttc 7390244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 354
Target Start/End: Original strand, 36718570 - 36718628
Alignment:
Q  296 gttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||| |||||  ||| |||||||||||||||| ||||||| |||||    
T  36718570 gttgtgattctttcaataaaataactttacaaattgactgattaaatgattatacaaat 36718628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 33281730 - 33281677
Alignment:
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||||||| |||||    
T  33281730 gattctttcaatgaaataactttttaaattgactaattaagtgattatacaaat 33281677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 27351404 - 27351352
Alignment:
Q  302 attctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||  ||| ||||||||||||||||||| |||| |||||    
T  27351404 attctttcaatgaaataactttccaaattgactgattaagtggttatacaaat 27351352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 8379197 - 8379286
Alignment:
Q  48 gaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    |||||||  ||||||||||||| ||||| ||| ||||||||||||| ||||| ||||| |||| | | || ||| |||||||||| |||||    
T  8379197 gaccgttcttatgaaataggagattcggctctctttttaaaatagg-tctagtaaaataaaaatggatttttttttgtgtagttatgcttc 8379286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 931677 - 931636
Alignment:
Q  51 cgtttctatgaaataggaggttcggttctatttttaaaatag 92  Q
    |||| |||||||||||||||||||| ||| ||||||||||||    
T  931677 cgttcctatgaaataggaggttcggctctctttttaaaatag 931636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 3349479 - 3349571
Alignment:
Q  45 caggaccgtttctatgaaataggaggttcggttctatttttaaaataggt-tctaggaaaatcaaaacgcaattctttctgtgtagttaagctt 137  Q
    |||||||||  ||||||||||||||| |||| ||| | |||||||||||| || |  ||||| ||||||||||| ||| ||||||| |||||||    
T  3349479 caggaccgtccctatgaaataggaggctcggctctctatttaaaataggtctccaataaaataaaaacgcaatt-tttttgtgtagctaagctt 3349571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 10033607 - 10033570
Alignment:
Q  297 ttgtgattctttcaatgaaatagtttttcaaattgact 334  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  10033607 ttgtgattctttcaataaaatagcttttcaaattgact 10033570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 16515656 - 16515596
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaa 268  Q
    |||||||||| |||| |||  | ||||||||||||||||||| |||||| |||||| ||||    
T  16515656 gtgaaatttagctaatggtgtcatttggaatgtcactcctacatcgtagaaaagggaaaaa 16515596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 40779254 - 40779195
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||| | ||||| |||||||||||||||||||| |||||  |||||| |||||    
T  40779254 ttgttgtgattcct-caatggaatagtttttcaaattgacttattaaacgattatacaaat 40779195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 208 - 354
Target Start/End: Original strand, 36438264 - 36438412
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgtgattc 305  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||||| |||||||||||||||||||| |            ||||||||||||    
T  36438264 gtgaaatttacctaacggtgtcatttggaatgtcactcctacgtcgtaggaaaagggaaaacgaatggtttatgtgaaaaataaattattgttgtgattc 36438363  T
Q  306 tttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  36438364 tttcaatgaaatggtttttcaaattgactgattaagtgattatacaaat 36438412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 7366843 - 7366690
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgt 300  Q
    |||| ||||||||||||| |||||  ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||            |||||||    
T  7366843 gagaggtgaaatttaccttacggtgtcgtttggaatgtcactcctacgtcgcaggaaaggggaaaatgaatggtttatgcgaaaaagaaataattgttgt 7366744  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||| ||||||||||||||||||||  ||||||| |||||||||||    
T  7366743 gattctttcaataaaatagtttttcaaattgacaaattaagtaattattcaaat 7366690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 26633519 - 26633366
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgt 300  Q
    |||| ||||||||||| |||||||  ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||            |||||||    
T  26633519 gagaggtgaaatttacttaacggtgtcgtttggaatgtcactcatacgtcgtgggaaagggaaaaatgaatggtttatgcgaaaaagaaatgattgttgt 26633420  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  26633419 gattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 26633366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 40737908 - 40738052
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnnttgttgtga 302  Q
    |||| |||||||||||||||||||  | |||| |||||||||||||||||||||||||||||||||||||| |||||||||            |||||||    
T  40737908 gagaggtgaaatttacctaacggtgtcatttgaaatgtcactcctacgtcgtaggaaaggggaaaacgaatagtttatgcgaaaaa-------gttgtga 40738000  T
Q  303 ttctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||| |||||| |||| ||||||||||||||||| ||||| |||||    
T  40738001 ttctttcaataaaatagctttttaaattgactgattaagtaattatacaaat 40738052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 18895334 - 18895458
Alignment:
Q  232 ttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgtgattctttcaatgaaatagtttttcaaat 329  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||            |||||||||||||||||||||||||  |||| ||||    
T  18895334 ttggaatgtcactcctacgtcgtaggtaaggggaaaacgaattgtttatgcgaaaaggaaataattgttgtgattctttcaatgaaataactttttaaat 18895433  T
Q  330 tgactgattaagtgattattcaaat 354  Q
    ||||||||||| ||||||| |||||    
T  18895434 tgactgattaattgattatacaaat 18895458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 26282543 - 26282603
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  26282543 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 26282603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 40001697 - 40001757
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  40001697 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 40001757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 33910127 - 33910067
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  33910127 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagcgattatacaaat 33910067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 7370094 - 7370013
Alignment:
Q  56 ctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||||||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||||  ||||||  ||||||||    
T  7370094 ctatgaaataggaggctcggttctatttttaaaata-gatctagtaaaatcaaaacgcaattcttcttgtgtaactaagcttc 7370013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 4100031 - 4099971
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  4100031 ttgttgtaattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaat 4099971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 7636327 - 7636387
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  7636327 ttgttgcgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaat 7636387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 9479190 - 9479130
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||    
T  9479190 ttgttgtgattctttcaacgaaatagttttttaaattgactgattaagtaattatacaaat 9479130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 18015583 - 18015643
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||    
T  18015583 ttgttgtgattctttcaatgaaatagctttccaaattgattgattaagtgattatacaaat 18015643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 36796373 - 36796433
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| |||||    
T  36796373 ttgttgtgattctttcaatgaaataattttccaaattgactgattaagttattatacaaat 36796433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 46221704 - 46221756
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgatt 346  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  46221704 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgatt 46221756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 12251289 - 12251343
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||    
T  12251289 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaaatgattat 12251343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 32956927 - 32956784
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgtgatt 304  Q
    |||||||||||||||| ||  |||||||| | ||||||| | ||| || ||||||||||||||||||||||||||||            |||||||||||    
T  32956927 gtgaaatttacctaacagtgtcgtttggatttgtcactcatccgttgtgggaaaggggaaaacgaatggtttatgcgaaaaagaaatcattgttgtgatt 32956828  T
Q  305 ctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    ||||||||||||||  |||  ||||||||||||||| |||||||    
T  32956827 ctttcaatgaaataactttataaattgactgattaaatgattat 32956784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 773885 - 773945
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||| |||||    
T  773885 ttgttgtgattctttcaataaaatagcttttcaaattgactgataaagtaattatacaaat 773945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 6380085 - 6380145
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||||  || |||||||| ||||||||||||||| |||||    
T  6380085 ttgttgtgattctttcaatgaaatagacttccaaattgattgattaagtgattatacaaat 6380145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 11672649 - 11672589
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||||||||||||| |||||    
T  11672649 ttgttgtgattctttcattgaaataactttccaaattgactgattaagtgattatacaaat 11672589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 30739184 - 30739132
Alignment:
Q  296 gttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  30739184 gttgtgattcttttaatgaaataacttttcaaattgactgattaagtgattat 30739132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 41908241 - 41908189
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgatt 346  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  41908241 ttgttgtgattctttcaatgaaacagcttttctaattgactgattaagtgatt 41908189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 44894030 - 44894090
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||| |||||    
T  44894030 ttgttgtgattctttcaataaaatagctttccaaattgattgattaagtgattatacaaat 44894090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 42312071 - 42312012
Alignment:
Q  295 tgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||| |||||||||| |||||||||||||| || |||||||||| |||||    
T  42312071 tgttgtgattcttttaatgaaatagcttttcaaattgactaatcaagtgattatacaaat 42312012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 1366072 - 1366018
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||||| |||||    
T  1366072 ttgttgtgattctttctatgaaataacttttcaaattgactgattaagtcattat 1366018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 8358295 - 8358349
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    ||||||||||||||||||||| |||  |||| |||||||||||||||||||||||    
T  8358295 ttgttgtgattctttcaatgagataactttttaaattgactgattaagtgattat 8358349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 40737760 - 40737816
Alignment:
Q  57 tatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgc 113  Q
    |||||||||||||| ||||||||||||||||||||| ||| || ||||| |||||||    
T  40737760 tatgaaataggaggctcggttctatttttaaaatagattcgagtaaaataaaaacgc 40737816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 40841157 - 40841233
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg 283  Q
    ||||||||| ||||| |||  |||||||| | |||||| || ||| |||||||||||||||||||||||||||||||    
T  40841157 gtgaaattttcctaatggtctcgtttggatttgtcacttctccgttgtaggaaaggggaaaacgaatggtttatgcg 40841233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 42161125 - 42161181
Alignment:
Q  298 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||| ||| |||||| |||||| |||||||||| |||||    
T  42161125 tgtgattctttcaatgaaatagctttccaaattaactgatcaagtgattatacaaat 42161181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 33419121 - 33419179
Alignment:
Q  297 ttgtgattctttcaatgaaatagtttttcaaattgac-tgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||  ||||||||||||| | ||||||||||||| |||||    
T  33419121 ttgtgattctttcaatgaaataacttttcaaattgacttaattaagtgattatacaaat 33419179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 44876156 - 44876208
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgatt 346  Q
    ||||||||||||||| |||||||||| |||  ||||||||||||||| |||||    
T  44876156 ttgttgtgattcttttaatgaaatagctttctaaattgactgattaaatgatt 44876208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 25061957 - 25061914
Alignment:
Q  303 ttctttcaatgaaatagtttttcaaattgactgattaagtgatt 346  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||    
T  25061957 ttctttcaatgaaatagcttttcaaattaactgataaagtgatt 25061914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 36438117 - 36438194
Alignment:
Q  60 gaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||||||||| ||||||||||||||||||||||    || ||||| |||| |||||| ||| ||||||| ||||||||    
T  36438117 gaaataggaggctcggttctatttttaaaataggcctcagtaaaataaaaatgcaatt-tttgtgtgtagctaagcttc 36438194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 41852302 - 41852355
Alignment:
Q  295 tgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    ||||| ||||||||||||||||||  | || ||||||||||| |||||||||||    
T  41852302 tgttgcgattctttcaatgaaataactctttaaattgactgagtaagtgattat 41852355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 4100264 - 4100228
Alignment:
Q  56 ctatgaaataggaggttcggttctatttttaaaatag 92  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  4100264 ctatgaaataggaggttcggctctctttttaaaatag 4100228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 40001466 - 40001553
Alignment:
Q  50 ccgtttctatgaaataggaggttcggttctatttttaaaatagg-ttctaggaaaatcaaaacgcaattctttctgtgtagttaagctt 137  Q
    |||| ||||||||||||||||||||  ||| | ||||||||||| ||| |  ||||| |||| |||||| ||| |||||||||||||||    
T  40001466 ccgtctctatgaaataggaggttcgactctctatttaaaataggtttccaataaaataaaaatgcaatt-tttttgtgtagttaagctt 40001553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 209 - 354
Target Start/End: Original strand, 50677228 - 50677375
Alignment:
Q  209 tgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgtgattct 306  Q
    ||||||||| ||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||            ||||||||||| |    
T  50677228 tgaaatttatctaacagtttcgtttggaatgtcactcctacatcgtaggaaaggggaaaacgaattgtttatgcgaaaaagaaataattgttgtgattgt 50677327  T
Q  307 ttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  50677328 ttcaatgaaatagtttttcaaattgactgattaagtgattatacaaat 50677375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 46904898 - 46904745
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgt 300  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||  || |||||||||             |||||||    
T  46904898 gagaggtgaaatttacctaacggtgtcgtttggaatgtcactcctacgtcgtaggaaagggaaaaataaaaggtttatgcaaaaaagaaataattgttgt 46904799  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  46904798 gattctttcaatgaaatagttttttaaattgactgattaagtgattatacaaat 46904745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 229 - 354
Target Start/End: Original strand, 36538120 - 36538247
Alignment:
Q  229 cgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgtgattctttcaatgaaatagtttttca 326  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||    
T  36538120 cgtttagaatgtcactcctgcttcgtaggaaaggggaaaacgaatggtttatgcgaaaaagaaataattgttgtgattctttcaatgaaatagtttttca 36538219  T
Q  327 aattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||| |||||    
T  36538220 aattgactgattaagtgattatacaaat 36538247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 42009170 - 42009323
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgt 300  Q
    |||| |||||||||| |||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |            |||||||    
T  42009170 gagaggtgaaatttatctaacgatttcgtttggaatgtcactcttacgtcgtaggaaaggggaaaacgaatggtttatgtgaaaaagaaataattgttgt 42009269  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  42009270 gattctttcaatgaaataactttttaaattgactgattaagtgattatacaaat 42009323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 7767222 - 7767066
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn-----ttgt 297  Q
    |||| |||||||||||||||| ||  | |||||||||||||||||||||| ||||||| |||||||||||| ||||||| |               ||||    
T  7767222 gagatgtgaaatttacctaactgtgtcatttggaatgtcactcctacgtcttaggaaatgggaaaacgaatagtttatgtgaagaaaaaaaaataattgt 7767123  T
Q  298 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  7767122 tgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 7767066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 354
Target Start/End: Complemental strand, 51147085 - 51146941
Alignment:
Q  211 aaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg---gnnnnnnnnnttgttgtgattctt 307  Q
    ||||||||||||||||  |||||||||||||||| ||| ||||||| |||||| |||||||||||||||||||   |         ||||||||||||||    
T  51147085 aaatttacctaacggtgtcgtttggaatgtcacttctatgtcgtagaaaaggg-aaaacgaatggtttatgcgagagaaaaaataattgttgtgattctt 51146987  T
Q  308 tcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  51146986 tcaataaaatagttttttaaattgactgattaagtga-tattcaaat 51146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 27303341 - 27303190
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgt 300  Q
    |||| ||||||||||||||| |||  |||||| |||||||||||||||||||||||||||| ||||| ||| |||||||||            |||||||    
T  27303341 gagaggtgaaatttacctaatggtgtcgtttg-aatgtcactcctacgtcgtaggaaaggg-aaaacaaatagtttatgcgaaaaagaaataattgttgt 27303244  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  27303243 gattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaat 27303190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 25599087 - 25599141
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25599087 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 25599141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 41707056 - 41707116
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  41707056 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatgcaaat 41707116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 51939557 - 51939617
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  51939557 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 51939617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 354
Target Start/End: Original strand, 52655034 - 52655184
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnnt---tgttgtgat 303  Q
    |||||||||| ||||||||| |||||| | | |||||||||| || || | |||||| |||||||||||||||||||          |   |||||||||    
T  52655034 gtgaaatttatctaacggtatcgtttgaatttgtcactcctatgttgtggaaaagggtaaaacgaatggtttatgcgaggaaaaaaatgattgttgtgat 52655133  T
Q  304 tctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  52655134 tctttcaatgaaatagctttccaaattgactgattaagtgattatacaaat 52655184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 13401522 - 13401462
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  13401522 ttgttgtgattcttccaatgaaatagcttttcaaattgactgattaagtgattatacaaat 13401462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 28132736 - 28132796
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  28132736 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaat 28132796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 46791698 - 46791758
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||    
T  46791698 ttgttgtgattcttgcaatgaaatagttttccaaattgactgattaagtgattatacaaat 46791758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 48627030 - 48627090
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||    
T  48627030 ttgttgtgattctttcaatgaaatagattttcaaattgactgatcaagtgattatacaaat 48627090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 8364235 - 8364175
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  8364235 ttgttgtgattctttcaatgaaataactttccaaattgactgattaagtgattatacaaat 8364175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 18408254 - 18408194
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||||||||| |||||    
T  18408254 ttgttgtgattctttcaatggattagcttttcaaattgactgattaagtgattatacaaat 18408194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 21784785 - 21784845
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  21784785 ttgttgtgattctttcaatgaaatagctttccaaattaactgattaagtgattatacaaat 21784845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 29387755 - 29387815
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||||||| |||||    
T  29387755 ttgttgtgattctttcaatgaaataacttttcaaattgattgattaagtgattatacaaat 29387815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 46905051 - 46904963
Alignment:
Q  50 ccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||  ||||| ||| |||||||  |||||||    
T  46905051 ccgttcctatgaaataggaggctcggttctatttttaaaataggttccagtaaaataaaaattcaattttttatgtgtagcgaagcttc 46904963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 27303501 - 27303436
Alignment:
Q  45 caggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaa 110  Q
    |||| ||||| | ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  27303501 cagggccgttccaatgaaataggaggctcggttctatttttaaaataggttctagtaaaataaaaa 27303436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 40152130 - 40152191
Alignment:
Q  294 ttgttgtgattc-tttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  40152130 ttgttgtgattcgttttaatgaaatagtttttcaaattgaccgattaagtgattatacaaat 40152191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 7767375 - 7767287
Alignment:
Q  50 ccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||  | || || || |||||||| || ||| ||||||| ||||||||    
T  7767375 ccgttcctatgaaataggaggctcggttctatttttaaaataggcccaagtaagataaaaacgcatttttttgtgtgtagctaagcttc 7767287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 23164573 - 23164633
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||||  || |||||||| ||||||||||||||| |||||    
T  23164573 ttgttgtgattctttcaatgaaatagacttccaaattgattgattaagtgattatacaaat 23164633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 21596398 - 21596338
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||  |||||||||| ||| ||||| |||||||||||||||||| |||||    
T  21596398 ttgttgtgattcttgtaatgaaatagctttccaaatcgactgattaagtgattatacaaat 21596338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 24252683 - 24252623
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||| || |||||||  ||| |||||||||||||||||||||||| |||||    
T  24252683 ttgttgtgattcttgcactgaaataactttccaaattgactgattaagtgattatacaaat 24252623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 54430607 - 54430555
Alignment:
Q  302 attctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||| |||||    
T  54430607 attcttttaatgaaataacttttcaaattgactgattaagtgattatacaaat 54430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 42009039 - 42009126
Alignment:
Q  51 cgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    |||| |||||||||| ||||||||||||||||||||||||| | |  || ||||| ||||  ||| | ||| ||||||||||||||||    
T  42009039 cgttcctatgaaatatgaggttcggttctatttttaaaataagcttcagtaaaataaaaatacaaatttttttgtgtagttaagcttc 42009126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 51147252 - 51147205
Alignment:
Q  45 caggaccgtttctatgaaataggaggttcggttctatttttaaaatag 92  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  51147252 cagggccgttcctatgaaataggaggctcggttctatttttaaaatag 51147205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 1649843 - 1649892
Alignment:
Q  305 ctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||| |||||||| |||||||||||| ||||||||||||||| |||||    
T  1649843 ctttcagtgaaatagattttcaaattgaatgattaagtgattatacaaat 1649892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 19965884 - 19965941
Alignment:
Q  297 ttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||| |||||||||| ||||||| || ||| ||||||||||||| |||||    
T  19965884 ttgtgattcttttaatgaaatagcttttcaatttaactaattaagtgattatacaaat 19965941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 20762112 - 20762052
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||| ||||||||||||||||||||  || |||||| |||||| |||||||||| |||||    
T  20762112 ttgttatgattctttcaatgaaatagacttccaaattaactgatcaagtgattatacaaat 20762052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 23067730 - 23067786
Alignment:
Q  298 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||| |||||||||  ||||||||||||||| | |||||||||| |||||    
T  23067730 tgtgattctttaaatgaaataacttttcaaattgactggtgaagtgattatacaaat 23067786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 15987321 - 15987276
Alignment:
Q  238 tgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg 283  Q
    |||||||||| ||| || |||||||| |||||||||||||||||||    
T  15987321 tgtcactcctccgttgtgggaaagggaaaaacgaatggtttatgcg 15987276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 27729770 - 27729830
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||| || |||| | ||| |||||||| |||||| |||||||| |||||    
T  27729770 ttgttgtgattctttcgatcaaattgctttccaaattgattgattatgtgattatacaaat 27729830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 48626779 - 48626827
Alignment:
Q  45 caggaccgtttctatgaaataggaggttcggttctatttttaaaatagg 93  Q
    |||||||||  ||||||||||||||| |||||||| | |||||||||||    
T  48626779 caggaccgtccctatgaaataggaggctcggttctctatttaaaatagg 48626827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 3628655 - 3628808
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgt 300  Q
    |||| |||||||||||||||| ||  |||||||||||||||||||||||||||||||| || |||||||||||||||||||            |||||||    
T  3628655 gagaggtgaaatttacctaactgtgtcgtttggaatgtcactcctacgtcgtaggaaacggaaaaacgaatggtttatgcgaaaaagaaataattgttgt 3628754  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||| |||||    
T  3628755 gattctttcaatgaaataacttttcaaattgactgattatgtgattatacaaat 3628808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 36515069 - 36515202
Alignment:
Q  209 tgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgc---ggnnnnnnnnnttgttgtgattc 305  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||| |||||||| |||| |||||||   |          ||||||||||||    
T  36515069 tgaaatttatctaacggtgtcgtttggaatgtcactcctacgtcgtaggaaatgggaaaacaaatgatttatgcgaagaaaaaaataattgttgtgattc 36515168  T
Q  306 tttcaatgaaatagtttttcaaattgactgatta 339  Q
    ||||||||||||||||||| ||||| ||||||||    
T  36515169 tttcaatgaaatagttttttaaattaactgatta 36515202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 3471663 - 3471603
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  3471663 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 3471603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 32098085 - 32098239
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttg 299  Q
    |||||||||||||||| |||||||  |||||||| | |||||||||  || || |||| ||||||||||||||||||||||             ||||||    
T  32098085 gagaagtgaaatttacgtaacggtgtcgtttggattcgtcactcctctgttgtgggaatggggaaaacgaatggtttatgcaaaaaagaaataattgttg 32098184  T
Q  300 tgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  32098185 tgattctttcaatgaaatagttttccaaattgactgattaagtgatcatacaaat 32098239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 34523952 - 34524012
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  34523952 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 34524012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 5869323 - 5869375
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgatt 346  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5869323 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgatt 5869375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 12531622 - 12531562
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  12531622 ttgttgtgattctttcaatgaaatagatttttaaattgactgattaagtgattatacaaat 12531562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 18112179 - 18112119
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  18112179 ttgttgtgattctttcaataaaatagttttccaaattgactgattaagtgattatacaaat 18112119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 18420610 - 18420670
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||    
T  18420610 ttgttgtgattctttcaatgaaacagcttttcaaattgactgattaagtgattatacaaat 18420670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 23567275 - 23567335
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  23567275 ttgttgtgatactttcaatgaaatagtatttcaaattgactgattaagtgattatacaaat 23567335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 42076260 - 42076185
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcgg 284  Q
    |||||||||||||||||||  | ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  42076260 gtgaaatttacctaacggtgtcatttggaatgtcactcctac-tcgtagaaaaggggaaaacgaatagtttatgcgg 42076185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 43926324 - 43926384
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  43926324 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaat 43926384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 1004122 - 1004061
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagttttt-caaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  1004122 ttgttgtgattctttcaatgaaataattttttcaaattgactgattaagtgattatacaaat 1004061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 13585362 - 13585302
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||    
T  13585362 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaattgattatacaaat 13585302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 43968071 - 43968131
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||||||| |||||    
T  43968071 ttgttgtgattctttcaatgaaataacttttcaaattgattgattaagtgattatacaaat 43968131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 35875216 - 35875147
Alignment:
Q  44 gcaggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgc 113  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||  || || ||||| |||||||    
T  35875216 gcagggccgttactatgaaataggaggttcggttctatttttaaaatagactcgagtaaaataaaaacgc 35875147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 27074637 - 27074577
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||| |||||    
T  27074637 ttgttgtgattttttcaatgaaatagacttttaaattgactgattaagtgattatacaaat 27074577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 35874989 - 35874929
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||| ||||||| | ||||||||||||||||||||| |||||||||||||| |||||    
T  35874989 ttgttgtggttctttctaagaaatagtttttcaaattgaccgattaagtgattatacaaat 35874929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 39697939 - 39697999
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| |||| || |||||    
T  39697939 ttgttgtgattctttcaatgaaatagcttttcaaattgactaattaaatgatcatacaaat 39697999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 42951774 - 42951830
Alignment:
Q  298 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||    
T  42951774 tgtgattctttcaataaaataacttttcaaattgactgattaagtgattatacaaat 42951830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 29372508 - 29372433
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg 283  Q
    ||||||||||||||| |||  |||||||| |||||||||| | |||| | ||||||||||| ||||||||||||||    
T  29372508 gtgaaatttacctaatggtgtcgtttggattgtcactccttcatcgtggcaaaggggaaaatgaatggtttatgcg 29372433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 30915288 - 30915343
Alignment:
Q  294 ttgttgtgattctttc-aatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  30915288 ttgttgtgattctttttaatgaaatagcttttcaaattgactgattaagtgattat 30915343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 42076408 - 42076330
Alignment:
Q  59 tgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||||| |||||||||||||||| ||||||||||  | | | |||||||||||||||||||| ||||||| ||||||||    
T  42076408 tgaaataagaggttcggttctattgttaaaataggcccca-gtaaatcaaaacgcaattctttttgtgtagataagcttc 42076330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 7858148 - 7858088
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| |||||| ||  ||| |||||||||||||||||||||||| |||||    
T  7858148 ttgttgtgattctttaaatgaattaactttccaaattgactgattaagtgattatacaaat 7858088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 44665047 - 44665107
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  ||| ||||| ||||||||||||||| || |||||    
T  44665047 ttgttgtgattctttcaatgaaataactttccaaatagactgattaagtgatgatacaaat 44665107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 33453064 - 33453021
Alignment:
Q  50 ccgtttctatgaaataggaggttcggttctatttttaaaatagg 93  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||    
T  33453064 ccgttcctatgaaataggaggttcagttctctttttaaaatagg 33453021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 18112424 - 18112378
Alignment:
Q  59 tgaaataggaggttcggttctatttttaaaataggttctaggaaaat 105  Q
    ||||||||||||||||| ||| |||||||||||||| |||| |||||    
T  18112424 tgaaataggaggttcggctctctttttaaaataggtcctagtaaaat 18112378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 36514905 - 36514978
Alignment:
Q  45 caggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattct 119  Q
    |||| ||||| ||||||||||||||||| |||| |||||||||| |||  |  || |||||||||||||||||||    
T  36514905 cagggccgttcctatgaaataggaggtttggtt-tatttttaaattagacttcagtaaaatcaaaacgcaattct 36514978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 42076165 - 42076111
Alignment:
Q  300 tgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||  |||| |||||||||||| ||||||||| ||||| |||||    
T  42076165 tgattctttcaatgttatagcttttcaaattgattgattaagttattatacaaat 42076111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 29372420 - 29372360
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||| |||||||||||  ||||  ||| |||||||||||||||| ||||||| |||||    
T  29372420 ttgttgtcattctttcaattgaataactttccaaattgactgattaaatgattatacaaat 29372360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 13997469 - 13997317
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgt 300  Q
    |||| |||||||||||||||  ||   |||||||||||||||| ||||||||||||||||| |||||||||||||||||||            |||||||    
T  13997469 gagatgtgaaatttacctaaatgtgttgtttggaatgtcactcatacgtcgtaggaaaggg-aaaacgaatggtttatgcgaaaaagaaataattgttgt 13997371  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13997370 gattctttcaatgaaatagtttttcaaattgactcattaagtgattattcaaat 13997317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 29480545 - 29480698
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgt 300  Q
    |||| ||||| |||||||||||||  |||||||||||||||||||| |||||| |||||||||| || |||||||||||||            |||||||    
T  29480545 gagaggtgaactttacctaacggtgtcgtttggaatgtcactcctatgtcgtaagaaaggggaagacaaatggtttatgcgaaaaagaaataattgttgt 29480644  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  29480645 gattctttcaatgaaataatttttcaaattgactgaataagtgtttattcaaat 29480698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 1419065 - 1418912
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgt 300  Q
    ||||||||||||||||||||||||  | ||||||||||||||| |||||| |||||||||  |||| |||| |||||||||            |||||||    
T  1419065 gagaagtgaaatttacctaacggtgtcatttggaatgtcactcatacgtcataggaaaggaaaaaatgaatagtttatgcgaaaaagaaataattgttgt 1418966  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  1418965 gattctttcaatgaaatagctttacaaattgactgattaagtgattatacaaat 1418912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 209 - 354
Target Start/End: Complemental strand, 38599551 - 38599405
Alignment:
Q  209 tgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn-ttgttgtgattctt 307  Q
    ||||||||||||||||||  |||||| |||| ||||| |||||||| ||||||||||||||||||||||||||             ||||| ||||||||    
T  38599551 tgaaatttacctaacggtgtcgtttgaaatgccactcatacgtcgtgggaaaggggaaaacgaatggtttatgaaaaaataaataattgttttgattctt 38599452  T
Q  308 tcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  38599451 tcaatgaaatagtttttcaaattgattgattaagtgattatacaaat 38599405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 354
Target Start/End: Complemental strand, 39081525 - 39081401
Alignment:
Q  231 tttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn-ttgttgtgattctttcaatgaaatagtttttcaaat 329  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |           ||||||| |||||||||||||||||| |||||||||    
T  39081525 tttggaatgtcactcctacgtcgtaggaaaggggaaaactaatggtttatatgaaaagaaataattgttgtaattctttcaatgaaatagcttttcaaat 39081426  T
Q  330 tgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||    
T  39081425 tgactgattaagtgattatacaaat 39081401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 13997633 - 13997534
Alignment:
Q  39 catcagcaggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    || ||||||||||||||||||||| ||||||| ||||||||    
T  13997633 catctgcaggaccgttcctatgaaataggaggctcggttctatttttaaaataggccacagtaaaatcaaaacgcaattctttttgtgtagctaagcttc 13997534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 19367420 - 19367480
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  19367420 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 19367480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 41096539 - 41096599
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  41096539 ttgttgtgattctttcaatgaaatagttttccaaattgactgattaagtgattatacaaat 41096599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 211 - 354
Target Start/End: Original strand, 36059821 - 36059966
Alignment:
Q  211 aaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgc--ggnnnnnnnnnttgttgtgattcttt 308  Q
    |||||||| ||||||   ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||             |||||||| ||||||    
T  36059821 aaatttacgtaacggcgtcgtttggaatgtcactcatacgtcgtgggaaaagggaaaacgaatggtttatgcaaaaaagaaatgattgttgtggttcttt 36059920  T
Q  309 caatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||| |||| ||||| ||||||||||||||||| |||||    
T  36059921 caatgaaatagctttttaaattaactgattaagtgattatacaaat 36059966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 354
Target Start/End: Original strand, 26151658 - 26151808
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnnt---tgttgtgat 303  Q
    |||||||||| ||||||||  |||||||| | |||||||||  || |||| |||||| |||||||||||||||||||          |   |||||||||    
T  26151658 gtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtagaaaagggtaaaacgaatggtttatgcgaagaaaaaaatgattgttgtgat 26151757  T
Q  304 tctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  26151758 tctttcaatgaaatagctttccaaattgactgattaagtgattatacaaat 26151808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 2063868 - 2063808
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  2063868 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaat 2063808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 6530722 - 6530662
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  6530722 ttgttgtgattctttcaatgaaataccttttcaaattgactgattaagtgattatacaaat 6530662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 15457563 - 15457503
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||    
T  15457563 ttgttgtgattctttcaataaaatagcttttcaaattgactgattaagtgattatacaaat 15457503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 38599665 - 38599593
Alignment:
Q  209 tgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatg 281  Q
    ||||||||||||||||||  |||||| |||| ||||| |||||||| ||||||||||||||||||||||||||    
T  38599665 tgaaatttacctaacggtgtcgtttgaaatgccactcatacgtcgtgggaaaggggaaaacgaatggtttatg 38599593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 39081704 - 39081617
Alignment:
Q  50 ccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | || ||||| |||||  |||| ||| ||||||||||||||||    
T  39081704 ccgttcctatgaaataggaggttcggttctatttttaaaataggtcccagtaaaataaaaacataatt-tttttgtgtagttaagcttc 39081617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 4856056 - 4855996
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  4856056 ttgttgtgattctttcaatgaaatagctttccaaattcactgattaagtgattatacaaat 4855996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 7993695 - 7993635
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||    
T  7993695 ttgttgtgattctttcaatgaaatagctttccaaattggctgattaagtgattatacaaat 7993635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 13020486 - 13020426
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||    
T  13020486 ttgttgtgattctttaaatgaaatagctttccaaattgactgattaagtgattatacaaat 13020426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 18172941 - 18173001
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| |||||    
T  18172941 ttgttgtgattctttcgatgaaatagcttttcaaattgagtgattaagtgattatacaaat 18173001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 18676312 - 18676372
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||    
T  18676312 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagttattatacaaat 18676372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 21747231 - 21747291
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| |||||    
T  21747231 ttgttgtgattctttcaatgacatagtattttaaattgactgattaagtgattatacaaat 21747291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 38985710 - 38985770
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||    
T  38985710 ttgttgtgattctttcaatgaaatagcttttcaaattgattgattaaatgattatacaaat 38985770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 17117646 - 17117691
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgatta 339  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  17117646 ttgttgtgattctttcaatgaaatagcttttcaaattgactgatta 17117691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 298 - 354
Target Start/End: Original strand, 18916059 - 18916115
Alignment:
Q  298 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||||||| |||||    
T  18916059 tgtgattctttcagtgaaatagcttttcaaattgattgattaagtgattatacaaat 18916115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 27302529 - 27302589
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||| |||||    
T  27302529 ttgttgtgattcttttaatgatatagcttttcaaattgaccgattaagtgattatacaaat 27302589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 34061857 - 34061905
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagt 342  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  34061857 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagt 34061905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 42411559 - 42411619
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| |||||||||| ||| |||||||||| ||||||||||||| |||||    
T  42411559 ttgttgtgattctttaaatgaaatagctttccaaattgactaattaagtgattatacaaat 42411619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 45619039 - 45618980
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||||| |||||    
T  45619039 ttgttgtgattctttcaatgaaatagcttc-caaattgactgattaagtgattatacaaat 45618980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 45042455 - 45042392
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttca---aattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||||  |||||   |||||||||||||||||||||| |||||    
T  45042455 ttgttgtgattctttcaatgaaatagactttcaccaaattgactgattaagtgattatacaaat 45042392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 25222386 - 25222326
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  |||  ||||||||| ||||||||||||| |||||    
T  25222386 ttgttgtgattctttcaatgaaataactttctaaattgactaattaagtgattatacaaat 25222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 1419207 - 1419172
Alignment:
Q  61 aaataggaggttcggttctatttttaaaataggttc 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  1419207 aaataggaggttcggttctatttttaaaataggttc 1419172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 29480386 - 29480469
Alignment:
Q  45 caggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgta 128  Q
    |||| ||||| |||||||||| |||| | ||||||||||||||||||||  |  | |||||||||| |||||||||| ||||||    
T  29480386 caggcccgttcctatgaaatatgaggcttggttctatttttaaaataggcccccgtaaaatcaaaatgcaattctttttgtgta 29480469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 31273168 - 31273227
Alignment:
Q  295 tgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||| ||||||||| ||||||||||| || |||||||||||||||| ||||||| |||||    
T  31273168 tgttatgattcttttaatgaaatagtattccaaattgactgattaaatgattatacaaat 31273227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 42759757 - 42759802
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgatta 339  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||    
T  42759757 ttgttgtgattctttcaatgaaataactttccaaattgactgatta 42759802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 36059660 - 36059748
Alignment:
Q  50 ccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||||||||||||| |||  ||| |||||||||||||| | || ||||| ||||||||||| ||| | ||||| ||| ||||    
T  36059660 ccgttgctatgaaataggaggctcgactctttttttaaaataggtaccagtaaaataaaaacgcaattttttttttgtagctaaacttc 36059748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 3748476 - 3748629
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgt 300  Q
    |||| |||||||||||||||||||  | ||||||||||||||||||||||| | ||||||||||||||||| ||||||| |            |||||||    
T  3748476 gagatgtgaaatttacctaacggtgtcatttggaatgtcactcctacgtcgcatgaaaggggaaaacgaatagtttatgtgacaaagaaataattgttgt 3748575  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  3748576 gattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaat 3748629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 332
Target Start/End: Complemental strand, 6294410 - 6294279
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgt 300  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||| |||||||||            |||||||    
T  6294410 gagaggtgaaatttacctaacggtgtcgtttggaatgtcactcctacgtcgtgggaaaggggaaaacgaatagtttatgcgaaaaagaaatgattgttgt 6294311  T
Q  301 gattctttcaatgaaatagtttttcaaattga 332  Q
    ||||||||||||||||| | ||||||||||||    
T  6294310 gattctttcaatgaaattgcttttcaaattga 6294279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 628096 - 628156
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  628096 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 628156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 2618418 - 2618358
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  2618418 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 2618358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 12614717 - 12614777
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  12614717 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 12614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 31861064 - 31861004
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  31861064 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaat 31861004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 21946261 - 21946110
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgt 300  Q
    |||| ||| |||||||||||||||  |||||| |||||||||| ||||| ||||||||| ||||||||||| |||||||||            ||||| |    
T  21946261 gagaggtggaatttacctaacggtgtcgtttg-aatgtcactcttacgt-gtaggaaagaggaaaacgaattgtttatgcgaaaaagaaataattgttat 21946164  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    | ||||||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  21946163 ggttctttcaatgaaatagcttttcaaatagactgattaagtgattatacaaat 21946110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 29401203 - 29401149
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29401203 ttgttgtgattctttcaatgaaataacttttcaaattgactgattaagtgattat 29401149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 354
Target Start/End: Original strand, 30915277 - 30915427
Alignment:
Q  211 aaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn-------ttgttgtgat 303  Q
    |||||||| |||||||  |||||| ||||||||| |||||||||| ||||||||| || ||||||||||||||                 ||||||||||    
T  30915277 aaatttacataacggtgtcgtttgaaatgtcacttctacgtcgtaagaaaggggataatgaatggtttatgcgaaaaattaaagaaatgattgttgtgat 30915376  T
Q  304 tctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||| |||||    
T  30915377 tctttcaattaaatagcttttcaaattgactgattaagtaattatacaaat 30915427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 6754269 - 6754209
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||    
T  6754269 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgactatacaaat 6754209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 14893418 - 14893478
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||||    
T  14893418 ttgttgtgattcttttaacgaaatagtttttcaaattgactgattaagtaattatacaaat 14893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 22503798 - 22503752
Alignment:
Q  302 attctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  22503798 attctttcaacgaaatagtttttcaaattgactgattaagtgattat 22503752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 29308468 - 29308522
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| |||||    
T  29308468 ttgttgtgattacttcaatgaaatagtttttcaaattgactgattaagtcattat 29308522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 354
Target Start/End: Complemental strand, 29149556 - 29149406
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnnt---tgttgtgat 303  Q
    ||||||||||| |||||||| |||||||| | |||||||||  || || | |||||| |||||||||||||||||||          |   |||||||||    
T  29149556 gtgaaatttacgtaacggtatcgtttggatttgtcactcctctgttgtggaaaagggtaaaacgaatggtttatgcgaagaaaaaaatgattgttgtgat 29149457  T
Q  304 tctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||| ||  ||| |||||||||||||||||||||||| |||||    
T  29149456 tctttcaatgaactaactttccaaattgactgattaagtgattatacaaat 29149406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 57751 - 57691
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| |||||||||| |||  ||||||||||||||||||||||| |||||    
T  57751 ttgttgtgattctttgaatgaaatagctttctaaattgactgattaagtgattatacaaat 57691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 1690634 - 1690694
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||  |||||||||||| |||| |||||||||| |||||    
T  1690634 ttgttgtgattctttcaatgaaataaattttcaaattgattgatcaagtgattatacaaat 1690694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 6360822 - 6360763
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||    
T  6360822 ttgttgtgattctttcaatgaa-taacttttcaaattgactgattaagtgattatacaaat 6360763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 7525167 - 7525227
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||  ||| |||||||||||||||||||||||| |||||    
T  7525167 ttgttgtgattctttcaataaaataactttccaaattgactgattaagtgattatacaaat 7525227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 3514851 - 3514911
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||| |||| ||| |||||||| |||||| |||||||| |||||    
T  3514851 ttgttgtgattctttcaatgatatagctttccaaattgaatgattacgtgattatacaaat 3514911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 3748329 - 3748411
Alignment:
Q  57 tatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgca-attctttctgtgtagttaagcttc 138  Q
    |||||||||||||| ||||||||||||||||||||||| | || ||||| |||| |||  || ||| ||||||| ||||||||    
T  3748329 tatgaaataggaggctcggttctatttttaaaataggtccgagtaaaataaaaatgcattttttttgtgtgtagctaagcttc 3748411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 19231675 - 19231624
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgat 345  Q
    ||||||||||| ||||||||  |||| |||||||||||| ||||||||||||    
T  19231675 ttgttgtgattttttcaatgtcatagcttttcaaattgattgattaagtgat 19231624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 1093042 - 1093095
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||| ||| |||||    
T  1093042 ttgttgtgattctttca-tgaaatagctttttaaattgactgatttagtcattat 1093095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 354
Target Start/End: Complemental strand, 31234956 - 31234914
Alignment:
Q  312 tgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||| |||||||||||| ||||||||||||||| |||||    
T  31234956 tgaaatagcttttcaaattgattgattaagtgattatacaaat 31234914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 22504047 - 22504011
Alignment:
Q  56 ctatgaaataggaggttcggttctatttttaaaatag 92  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  22504047 ctatgaaataggaggctcggttctctttttaaaatag 22504011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 35653888 - 35654041
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgt 300  Q
    |||| |||||||||| ||||||||  | |||| |||||||||||||||||||||||||||| ||||||||| |||||||||            |||||||    
T  35653888 gagaggtgaaatttatctaacggtgtcatttgaaatgtcactcctacgtcgtaggaaagggaaaaacgaatagtttatgcgaaaaagaaataattgttgt 35653987  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  35653988 gattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaat 35654041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 32130791 - 32130851
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32130791 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatacaaat 32130851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 41038313 - 41038253
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  41038313 ttgttgtgattctttcaatgaaatagttttccaaattgactgattaagtgattatacaaat 41038253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 354
Target Start/End: Complemental strand, 22423837 - 22423687
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcgg----nnnnnnnnnttgttgtgat 303  Q
    |||||||||| ||||||||  |||||||||||||||||||| |||||| |||| || |||||||||| |||||| ||             ||||| ||||    
T  22423837 gtgaaatttatctaacggtgtcgtttggaatgtcactcctatgtcgtatgaaatggaaaaacgaatgatttatgtggaaaaaataaataattgttttgat 22423738  T
Q  304 tctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||| ||||||||||||||||||| |||||||||||| || |||||    
T  22423737 tctttcaataaaatagtttttcaaattgattgattaagtgatcatacaaat 22423687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 348
Target Start/End: Original strand, 21791456 - 21791602
Alignment:
Q  203 gagaagtgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgt 300  Q
    |||| ||||||||||||||||  |  |||||||| |||||||| | |||||| |||||||||||| | |||||||||||||            |||||||    
T  21791456 gagaggtgaaatttacctaacaatgtcgtttggattgtcactcattcgtcgtgggaaaggggaaa-caaatggtttatgcgaaaaagaaatgattgttgt 21791554  T
Q  301 gattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  21791555 gattctttcaatgaaataacttttcaaattgactgattaagtgattat 21791602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 23426167 - 23426227
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  23426167 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaat 23426227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 34982287 - 34982227
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  34982287 ttgttgtgattctttcaacgaaatagtttttccaattgactgattaagtgattatacaaat 34982227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 45172646 - 45172706
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  45172646 ttgttgtgattctttccatgaaatagcttttcaaattgactgattaagtgattatacaaat 45172706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 10575437 - 10575578
Alignment:
Q  209 tgaaatttacctaacggtaccgtttggaatgtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg--gnnnnnnnnnttgttgtgattct 306  Q
    |||||||||||| |||||  | || ||| |||||||||| |||||| ||||||||||||||||||||||||||||            ||||||||||| |    
T  10575437 tgaaatttacctgacggtgtcattcggattgtcactcctccgtcgtgggaaaggggaaaacgaatggtttatgcgaaaaagaaatgattgttgtgattat 10575536  T
Q  307 ttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    ||||||||||||  |||  |||||||||||||||||||||||    
T  10575537 ttcaatgaaataactttctaaattgactgattaagtgattat 10575578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 19661442 - 19661382
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  19661442 ttgttgtgtttctttcaatgaaatagctttccaaattgactgattaagtgattatacaaat 19661382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 44478102 - 44478042
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  44478102 ttgttgtgattctttcaatgaaatagctttccaaattgactgatttagtgattatacaaat 44478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 53011775 - 53011715
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||    
T  53011775 ttgttgtgattcttttaatgaaatagctttccaaattgactgattaagtgattatacaaat 53011715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 354
Target Start/End: Complemental strand, 5545481 - 5545332
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcggnnnnnnnnn--ttgttgtgatt 304  Q
    |||||||||||||||||||  |||||| | | ||||||||| ||| ||  ||| |||||||||||||||||||||||            |||||||||||    
T  5545481 gtgaaatttacctaacggtgtcgtttgaatttgtcactcctccgttgtgagaagggggaaaacgaatggtttatgcgaaaaataaatgattgttgtgatt 5545382  T
Q  305 ctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||| |||||||||| ||| ||||||||| |||||||||||||| |||||    
T  5545381 cttttaatgaaatagctttccaaattgaccgattaagtgattatacaaat 5545332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 11681743 - 11681797
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  11681743 ttgttgtgattctttcaatgaaataactttccaaattgactgattaagtgattat 11681797  T

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Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Original strand, 11690022 - 11690076
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  11690022 ttgttgtgattctttcaatgaaataactttccaaattgactgattaagtgattat 11690076  T

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Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 55134271 - 55134217
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 348  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  55134271 ttgttgtgattctttctatgaaatagcttttcaaattgactgattaagtcattat 55134217  T

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Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 24449416 - 24449347
Alignment:
Q  44 gcaggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgc 113  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||  || || ||||| |||||||    
T  24449416 gcagggccgttactatgaaataggaggttcggttctatttttaaaatagactcgagtaaaataaaaacgc 24449347  T

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Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 24449189 - 24449129
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||| ||||||| | ||||||||||||||||||||| |||||||||||||| |||||    
T  24449189 ttgttgtggttctttctaagaaatagtttttcaaattgaccgattaagtgattatacaaat 24449129  T

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Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 298 - 354
Target Start/End: Complemental strand, 27632457 - 27632401
Alignment:
Q  298 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||| |||||    
T  27632457 tgtgattctttcaatgaagtagcttttcaaattgactaattaagtgattatacaaat 27632401  T

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Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 28463589 - 28463649
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||| |||||    
T  28463589 ttgttgtgattttttcaatgaaatagcttttcaacttgattgattaagtgattatacaaat 28463649  T

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Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 43154789 - 43154849
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||| |||||||||  |||| ||||||||||||||||||||||| |||||    
T  43154789 ttgttgtgattcttttaatgaaataactttttaaattgactgattaagtgattatacaaat 43154849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 354
Target Start/End: Complemental strand, 16072648 - 16072597
Alignment:
Q  303 ttctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  16072648 ttctttcattgaaatagtttttcaaattgactgattaaatgattatacaaat 16072597  T

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Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 23256657 - 23256597
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||| |||||||| |||  |||||||||||||||||| |||| |||||    
T  23256657 ttgttgtgattctttcattgaaatagctttctaaattgactgattaagtggttatacaaat 23256597  T

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Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 354
Target Start/End: Complemental strand, 29579943 - 29579883
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||| | ||||| |||||    
T  29579943 ttgttgtgattctttcattgaaatagcttttcaatttgactgattaattaattatacaaat 29579883  T

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Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 35653735 - 35653823
Alignment:
Q  50 ccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaagcttc 138  Q
    ||||| ||||||||||| ||| |||||||||||||||| |||||  | || ||||| ||||| || || ||| ||||||||||||||||    
T  35653735 ccgttcctatgaaatagaaggctcggttctatttttaagataggcccgagtaaaataaaaacacatttttttgtgtgtagttaagcttc 35653823  T

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Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 29221622 - 29221682
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||| |||||||||||||  || ||||||||| | |||||||||||| |||||    
T  29221622 ttgttgtgattccttcaatgaaatagacttccaaattgaccgtttaagtgattatacaaat 29221682  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 22423976 - 22423938
Alignment:
Q  56 ctatgaaataggaggttcggttctatttttaaaataggt 94  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  22423976 ctatgaaataggagtctcggttctatttttaaaataggt 22423938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 23256911 - 23256825
Alignment:
Q  45 caggaccgtttctatgaaataggaggttcggttctatttttaaaataggttctaggaaaatcaaaacgcaattctttctgtgtagttaa 133  Q
    |||||| ||| || |||||||||||| |||| ||| |||||||||||||  |||| ||||| |||||| |||| ||| |||||||||||    
T  23256911 caggactgttcctgtgaaataggaggctcggctctctttttaaaataggccctagtaaaat-aaaacgtaatt-tttttgtgtagttaa 23256825  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 41038403 - 41038327
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg 283  Q
    |||||||||| ||||||||  |||||||| | |||||||||  || || | |||||| |||||||||||||||||||    
T  41038403 gtgaaatttatctaacggtgtcgtttggatttgtcactcctctgttgtggaaaagggtaaaacgaatggtttatgcg 41038327  T

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Target: scaffold0126 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 354
Target Start/End: Complemental strand, 16771 - 16713
Alignment:
Q  296 gttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  16771 gttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaat 16713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 17133 - 17193
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| |||||    
T  17133 ttgttgtgattctttcaacgaaatagctttccaaattgactgattaagtgattatacaaat 17193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 8399 - 8456
Alignment:
Q  297 ttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||| |||||    
T  8399 ttgtgattctttcaatgaaatagttttcgaaattgactgattaattgattatacaaat 8456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 294 - 354
Target Start/End: Original strand, 46174 - 46234
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 354  Q
    ||||||||||| ||||||||||||||  || |||||||||||||||||||||||| |||||    
T  46174 ttgttgtgattatttcaatgaaatagacttccaaattgactgattaagtgattatccaaat 46234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 1214 - 1138
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg 283  Q
    |||||||||| ||||||||  |||||||| | |||||||||| || || | |||||| |||||||||||||||||||    
T  1214 gtgaaatttatctaacggtgtcgtttggatttgtcactcctatgttgtggaaaagggtaaaacgaatggtttatgcg 1138  T

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Target: scaffold0564; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 332
Target Start/End: Complemental strand, 1124 - 1086
Alignment:
Q  294 ttgttgtgattctttcaatgaaatagtttttcaaattga 332  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  1124 ttgttgtgattctttcaatgaaatagctttccaaattga 1086  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 22809 - 22844
Alignment:
Q  297 ttgtgattctttcaatgaaatagtttttcaaattga 332  Q
    |||||||||||||||||||||||||||||| |||||    
T  22809 ttgtgattctttcaatgaaatagtttttcatattga 22844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 22716 - 22792
Alignment:
Q  208 gtgaaatttacctaacggtaccgtttggaat-gtcactcctacgtcgtaggaaaggggaaaacgaatggtttatgcg 283  Q
    |||||||||| ||||||||  |||||| | | |||||||||| || || | |||||| |||||||||||||||||||    
T  22716 gtgaaatttatctaacggtgtcgtttgaatttgtcactcctatgttgtggaaaagggtaaaacgaatggtttatgcg 22792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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