View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9726_low_10 (Length: 207)
Name: NF9726_low_10
Description: NF9726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9726_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 34008252 - 34008060
Alignment:
| Q |
1 |
actactagttagcttgagcttgaaaagtgataaactgcataatataaacaaaggatttaattaataagaagagtgcatatataagttattggaactcaca |
100 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
34008252 |
actactagttagtttgagcttgaaaagtgataaactgcataatttaaacaaaggatttaattaataagaagagtacatatataagttattggaactcaca |
34008153 |
T |
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| Q |
101 |
ccgtttctacaacaaacctggcatttcatccatcaattaaatcaaacacaactgtgtaaacaagaagaaatgccacttctaattactaaaaag |
193 |
Q |
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|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34008152 |
ccgtctctacaacatacctggcatttcatccatcaattaaatcaaacacaactgtgtaaacaagaagaaatgccacttctaattactaaaaag |
34008060 |
T |
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