View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9730_low_20 (Length: 398)

Name: NF9730_low_20
Description: NF9730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9730_low_20
NF9730_low_20
[»] chr6 (49 HSPs)
chr6 (1-379)||(26849291-26849676)
chr6 (10-377)||(26975539-26975913)
chr6 (10-377)||(26636234-26636608)
chr6 (10-377)||(26742200-26742574)
chr6 (10-377)||(26959714-26960086)
chr6 (1-377)||(26950322-26950705)
chr6 (10-377)||(25074458-25074829)
chr6 (22-377)||(27664425-27664787)
chr6 (138-367)||(31288984-31289220)
chr6 (167-376)||(26724313-26724529)
chr6 (167-290)||(29843301-29843424)
chr6 (10-103)||(31288893-31288986)
chr6 (167-289)||(26618385-26618506)
chr6 (186-289)||(28140299-28140402)
chr6 (167-289)||(26812273-26812395)
chr6 (189-290)||(28097757-28097858)
chr6 (171-290)||(28243544-28243663)
chr6 (167-289)||(29826731-29826853)
chr6 (171-290)||(28235314-28235433)
chr6 (171-290)||(28297054-28297173)
chr6 (171-290)||(28514900-28515019)
chr6 (157-236)||(26056657-26056736)
chr6 (157-236)||(26076627-26076706)
chr6 (171-238)||(27604070-27604137)
chr6 (171-238)||(27610486-27610553)
chr6 (171-238)||(27717865-27717932)
chr6 (177-236)||(29477436-29477495)
chr6 (166-236)||(26143612-26143682)
chr6 (175-236)||(25511645-25511706)
chr6 (171-236)||(25580471-25580536)
chr6 (181-238)||(27676986-27677043)
chr6 (177-290)||(28227707-28227820)
chr6 (171-235)||(28181866-28181930)
chr6 (172-272)||(28186143-28186243)
chr6 (171-235)||(28326227-28326291)
chr6 (171-235)||(28503863-28503927)
chr6 (181-236)||(27337463-27337518)
chr6 (181-236)||(27398203-27398258)
chr6 (166-236)||(25483803-25483873)
chr6 (177-283)||(26937784-26937890)
chr6 (171-236)||(25539292-25539357)
chr6 (171-272)||(26656714-26656815)
chr6 (171-272)||(26762685-26762786)
chr6 (171-236)||(27530669-27530734)
chr6 (181-238)||(27592387-27592444)
chr6 (296-376)||(26618539-26618618)
chr6 (331-367)||(26812444-26812480)
chr6 (171-239)||(26884819-26884887)
chr6 (159-235)||(28901336-28901412)
[»] chr2 (2 HSPs)
chr2 (39-377)||(17992435-17992780)
chr2 (173-272)||(3280410-3280509)
[»] chr1 (2 HSPs)
chr1 (167-376)||(26136633-26136849)
chr1 (171-236)||(28163743-28163808)
[»] chr5 (2 HSPs)
chr5 (162-289)||(16691607-16691734)
chr5 (335-376)||(16691787-16691828)
[»] scaffold0038 (3 HSPs)
scaffold0038 (171-290)||(43706-43825)
scaffold0038 (171-290)||(35476-35595)
scaffold0038 (177-290)||(28205-28318)
[»] scaffold0019 (1 HSPs)
scaffold0019 (168-290)||(57608-57730)
[»] chr4 (7 HSPs)
chr4 (171-272)||(5090285-5090386)
chr4 (173-238)||(18730866-18730931)
chr4 (173-238)||(18698762-18698827)
chr4 (173-238)||(18723447-18723512)
chr4 (34-81)||(5090476-5090523)
chr4 (173-272)||(18654805-18654904)
chr4 (173-238)||(18678922-18678987)
[»] scaffold0349 (1 HSPs)
scaffold0349 (171-238)||(2905-2972)
[»] scaffold0007 (3 HSPs)
scaffold0007 (159-235)||(31697-31773)
scaffold0007 (159-235)||(36446-36522)
scaffold0007 (159-235)||(67044-67120)
[»] chr8 (1 HSPs)
chr8 (162-272)||(31905791-31905901)
[»] scaffold0573 (1 HSPs)
scaffold0573 (159-235)||(8382-8458)


Alignment Details
Target: chr6 (Bit Score: 330; Significance: 0; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 26849291 - 26849676
Alignment:
Q  1 atgaacaccattttattgggaaaatagttaaggatgtctccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26849291 atgaacaccattttattgggaaaatagttaaggatgtctccaacaagatcaaccatgttcctttgcatgttgctgattaccttgttggacttaaatctcg 26849390  T
Q  101 aatatcagaagtgaattcacttctagacttgggatctaatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgct 200  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26849391 aatatcagaagtgaattcacttctagaattggaatctaatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgct 26849490  T
Q  201 caagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt--------g 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |    
T  26849491 caagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagtttctccaag 26849590  T
Q  293 agcagctcctctccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattccagtcataaaacaaaggctatct 379  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26849591 agcagctcctctccaaatcaatcagatttgaaactaag-tttggacatgttaatgaaggaattccagtcataaaacgaaggctatct 26849676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 26975539 - 26975913
Alignment:
Q  10 attttattgggaaaatagttaaggatgtctccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcgaatatcaga 109  Q
    |||||||||  ||||||||||  || |||||| ||||||||||||| | |||||| |||||||||||||||||||||||||| ||||||||||||| | |    
T  26975539 attttattgaaaaaatagttacagacgtctcctacaagatcaaccacgttcctttacatgttgctgattaccttgttggactcaaatctcgaatattaaa 26975638  T
Q  110 agtgaattcacttctagacttgggatctaatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtt 209  Q
    |||||| ||||| ||||||||||| |||| |||||||||||  | ||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  26975639 agtgaactcactactagacttggggtctactgatggagtcttcataataggaatccttggaactgggggaatgggtaagacaacacttgctcaagcagtt 26975738  T
Q  210 tataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt--------gagcagctcc 301  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||        ||||| ||||    
T  26975739 tataatttgattgctaatcaatttgaatgtaactgtttccttcacgatgtgagagaaaattcagttaaacatggcttagagtatctccaagagcaactcc 26975838  T
Q  302 tctccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattccagtcataaaacaaaggctat 377  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  26975839 tctccaaatcaatcggatttgaaactaag-tttggacatgttaatgaaggaattccaatcataaaacgaaggctat 26975913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 26636234 - 26636608
Alignment:
Q  10 attttattgggaaaatagttaaggatgtctccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcgaatatcaga 109  Q
    |||||||||  ||||||||||  || |||||| ||||||||||||| | |||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  26636234 attttattgaaaaaatagttacagacgtctcctacaagatcaaccacgttcctctacatgttgctgattaccttgttggactcaaatctcgaatatcaga 26636333  T
Q  110 agtgaattcacttctagacttgggatctaatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtt 209  Q
    |||||| ||||||||||||||||| |||| |||||||||||| | |||||||||||||||||| | ||||||||| || |||| ||||||||||||| ||    
T  26636334 agtgaactcacttctagacttggggtctactgatggagtctgcataataggaatccttggaaccgaaggaatgggcaagacaaaacttgctcaagcaatt 26636433  T
Q  210 tataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt--------gagcagctcc 301  Q
    ||||||| |||| || ||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||||||||        |||||| |||    
T  26636434 tataatttgatttctaatcaatttgaatgtttgtgtttccttcacaatgtgagagaaaattcagttaaacatggcttagagtatctccaagagcagatcc 26636533  T
Q  302 tctccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattccagtcataaaacaaaggctat 377  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  26636534 tctccaaatcaatcggatttgaaactaag-tttggacatgttaatgaaggaattccagtcataaaacgaaggctat 26636608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 26742200 - 26742574
Alignment:
Q  10 attttattgggaaaatagttaaggatgtctccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcgaatatcaga 109  Q
    |||||||||  ||||||||||  || |||||| ||||||||||||| | |||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  26742200 attttattgaaaaaatagttacagacgtctcctacaagatcaaccacgttcctctacatgttgctgattaccttgttggactcaaatctcgaatatcaga 26742299  T
Q  110 agtgaattcacttctagacttgggatctaatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtt 209  Q
    |||||| ||||||||||||||||| |||| |||||||||||| | |||||||||||||||||| | ||||||||| || |||| ||||||||||||| ||    
T  26742300 agtgaactcacttctagacttggggtctactgatggagtctgcataataggaatccttggaaccgaaggaatgggcaagacaaaacttgctcaagcaatt 26742399  T
Q  210 tataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt--------gagcagctcc 301  Q
    ||||||| |||| || ||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||||||||        |||||| |||    
T  26742400 tataatttgatttctaatcaatttgaatgtttgtgtttccttcacaatgtgagagaaaattcagttaaacatggcttagagtatctccaagagcagatcc 26742499  T
Q  302 tctccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattccagtcataaaacaaaggctat 377  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  26742500 tctccaaatcaatcggatttgaaactaag-tttggacatgttaatgaaggaattccagtcataaaacgaaggctat 26742574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 26959714 - 26960086
Alignment:
Q  10 attttattgggaaaatagttaaggatgtctccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcgaatatcaga 109  Q
    |||||||||  ||||||||||  || |||||||||||||| ||||||| |||||| ||||||||||||||||||||||| || ||||||||||||||| |    
T  26959714 attttattgaaaaaatagttacagacgtctccaacaagattaaccatgttcctttacatgttgctgattaccttgttggtctcaaatctcgaatatcaaa 26959813  T
Q  110 agtgaattcacttctagacttgggatctaatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtt 209  Q
    |||||||||||||  ||| |||||||| || ||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  26959814 agtgaattcactttcagagttgggatcaaacgatggagtctgcatgataggaatccttggaactggaggaatgggaaagacaacactttctcaagcagtt 26959913  T
Q  210 tataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt------gagcagctcctc 303  Q
    ||||||||||||| | |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||       ||  | |||||    
T  26959914 tataattcgattgttcatcaatttgaatttaagtgtttccttcacaatgtgagagaaaattcagttaaacatggcttagagtatctccaagaggatcctc 26960013  T
Q  304 tccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattccagtcataaaacaaaggctat 377  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  26960014 tccaaatcaatcggatttgaaactaag-tttggacatgttaatgaaggaattccaatcataaaacgaaggctat 26960086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 377
Target Start/End: Original strand, 26950322 - 26950705
Alignment:
Q  1 atgaacaccattttattgggaaaatagttaaggatgtctccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcg 100  Q
    |||||| | |||||||||  ||||||||||  || |||||| ||||||||||||| | |||| | |||||||||||||||||||||||||| ||||||||    
T  26950322 atgaacgcgattttattgaaaaaatagttacagacgtctcctacaagatcaaccacgttcctctacatgttgctgattaccttgttggactcaaatctcg 26950421  T
Q  101 aatatcagaagtgaattcacttctagacttgggatctaatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgct 200  Q
    ||||||||||||||||||||||  ||| |||||||| || ||||||||||| |  |||||||||||||||||||| ||||||||||| ||||||||||||    
T  26950422 aatatcagaagtgaattcactttcagagttgggatcaaacgatggagtctgcatgataggaatccttggaactgggggaatgggaaagacaacacttgct 26950521  T
Q  201 caagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt--------g 292  Q
    |||||||||||||| | ||||||| ||||||||||||| || ||||| |||||| ||||||||||||||||| | ||||||||||||||||        |    
T  26950522 caagcagtttataacttgattgctaatcaatttgaatgcaaatgttttcttcacaatgtgagagaaaattcagtaaaacatggcttagagtatctccaag 26950621  T
Q  293 agcagctcctctccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattccagtcataaaacaaaggctat 377  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  26950622 agcagctcctctccaaatcaatcggatttgaaactaag-tttggacatgttaatgaaggaattccaatcataaaacgaaggctat 26950705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 10 - 377
Target Start/End: Original strand, 25074458 - 25074829
Alignment:
Q  10 attttattgggaaaatagttaaggatgtctccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcgaatatcaga 109  Q
    |||||||||  ||||||||||  || |||||||||||||| |||||   |||||| |||||| |||||||||||||||| |||  ||||||||| |||||    
T  25074458 attttattgaaaaaatagttagagacgtctccaacaagattaaccaaattcctttacatgttactgattaccttgttggtcttcgatctcgaatttcaga 25074557  T
Q  110 agtgaattcacttctagacttgggatctaatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtt 209  Q
    |||||||||||||||||||||||||| |||||   |||| || | |||||||||| |||||||||| |||||||| || ||||| |||||||||||| ||    
T  25074558 agtgaattcacttctagacttgggatataatg---gagtatgcataataggaatcgttggaactggtggaatgggcaagacaactcttgctcaagcaatt 25074654  T
Q  210 tataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt--------gagcagctcc 301  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||        |||||||| |    
T  25074655 tataatttgattgctaatcaatttgaatgtaagtgtttccttcacaatgtgagagaaaattcagttcaacatggcttagagtatcttcaagagcagcttc 25074754  T
Q  302 tctccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattccagtcataaaacaaaggctat 377  Q
    |||  |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | ||||||||    
T  25074755 tctttaaatcaatcggatttgaaactaag-tttggacatgttaatgaaggaattccaatcataaagcgaaggctat 25074829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 22 - 377
Target Start/End: Complemental strand, 27664787 - 27664425
Alignment:
Q  22 aaatagttaaggatgtctccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcgaatatcagaagtgaattcact 121  Q
    |||||||||  || ||||||||||||||||||| |  || ||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  27664787 aaatagttacagacgtctccaacaagatcaaccgttgtcatttacatgttgctgagtaccttgttggactcgaatctcgaatatcagaagtgaattcact 27664688  T
Q  122 tctagacttgggatctaatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgatt 221  Q
    |||||||||||||| ||  ||||||||||  | ||||||||||||||||||||||||  |||| || |||||||||||| |||||||||||||||| |||    
T  27664687 tctagacttgggatgtaccgatggagtctacataataggaatccttggaactggaggtctgggtaagacaacacttgctgaagcagtttataattcaatt 27664588  T
Q  222 gctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt--------gagcagctcctctccaaatcaa 313  Q
    | | ||||||||||||||| |||||||||| || |||| |||||||||||| |||||||| ||||| |||        ||||||||||||||||||||||    
T  27664587 gttaatcaatttgaatgtaggtgtttcctttacaatgttagagaaaattcatttaaacatagcttaaagtatctccaagagcagctcctctccaaatcaa 27664488  T
Q  314 tcggatttgaaactaagttttggacatgttaatgaaggaattccagtcataaaacaaaggctat 377  Q
    |||||| ||| ||   |  | | ||||| |||||||||||||  | ||||||||||||||||||    
T  27664487 tcggatatgacaccccg-ctagaacatgataatgaaggaattgaaatcataaaacaaaggctat 27664425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 138 - 367
Target Start/End: Original strand, 31288984 - 31289220
Alignment:
Q  138 aatgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaat 237  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||  ||||||||||||||    
T  31288984 aatgatggagtctgcataataggaatacttggaactggaggaaggggtaaaacaacactttctcaagcaatttataattcgattattgatcaatttgaat 31289083  T
Q  238 gtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt--------gagcagctcctctccaaatcaatcggatttgaaactaa 329  Q
    |||||||||||||||||  ||||||||||||| |  ||||||||||||||||||        ||||||||||||||||||||||||||||||||||   |    
T  31289084 gtaagtgtttccttcacattgtgagagaaaatgctgttaaacatggcttagagtatctccaagagcagctcctctccaaatcaatcggatttgaaagaca 31289183  T
Q  330 gttttggacatgttaatgaaggaattccagtcataaaa 367  Q
    | |||||||||||||||||||||||| || ||||||||    
T  31289184 g-tttggacatgttaatgaaggaatttcaatcataaaa 31289220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 167 - 376
Target Start/End: Original strand, 26724313 - 26724529
Alignment:
Q  167 tggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaa 266  Q
    ||||| ||||||| |||| ||||| |||||| ||| |||||||||| ||| ||||||||||||||||||| |   ||||||||||||| |||||||||||    
T  26724313 tggaagtggaggattgggtaaaacgacacttactcgagcagtttatgatttgattgctgatcaatttgaagggttgtgtttccttcacaatgtgagagaa 26724412  T
Q  267 aattcacttaaacatggcttagagt--------gagcagctcctctccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattcca 358  Q
    |||||| ||||| |||||||||| |        ||| ||||||||||||||| ||||||||| |||  |||| || ||| |||||| |||||| ||| ||    
T  26724413 aattcaattaaatatggcttagaatatctccaagagaagctcctctccaaattaatcggattggaatttaag-ttcggagatgttagtgaagggatttca 26724511  T
Q  359 gtcataaaacaaaggcta 376  Q
     |||||||||| ||||||    
T  26724512 atcataaaacacaggcta 26724529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 29843424 - 29843301
Alignment:
Q  167 tggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaa 266  Q
    ||||| ||| ||| |||| |||||||||||||||| |||| ||||||||| |||||||||| |||||||||||  |||||| |||||||| | |||||||    
T  29843424 tggaattggtggattgggtaaaacaacacttgctcgagcaatttataatttgattgctgataaatttgaatgtttgtgttttcttcacgacgggagagaa 29843325  T
Q  267 aattcacttaaacatggcttagag 290  Q
    | ||||  ||||||||||||||||    
T  29843324 agttcagctaaacatggcttagag 29843301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 31288893 - 31288986
Alignment:
Q  10 attttattgggaaaatagttaaggatgtctccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcgaat 103  Q
    |||||||||  ||||||||||  ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| || |||||||||||    
T  31288893 attttattgaaaaaatagttacagatgtctccaacaagattaaccatgttcctttacatgttgctgattaccttgttggtctcaaatctcgaat 31288986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 289
Target Start/End: Original strand, 26618385 - 26618506
Alignment:
Q  167 tggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaa 266  Q
    ||||| ||||||| |||| ||||| |||||| ||| |||||||||| ||| ||||||||||||||||||| |   ||||||||||||| ||||||||| |    
T  26618385 tggaagtggaggattgggtaaaacgacacttactcgagcagtttatgatttgattgctgatcaatttgaagggttgtgtttccttcacaatgtgagag-a 26618483  T
Q  267 aattcacttaaacatggcttaga 289  Q
    |||||| ||||| ||||||||||    
T  26618484 aattcaattaaatatggcttaga 26618506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 28140299 - 28140402
Alignment:
Q  186 aaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggct 285  Q
    |||||||||||||| |||||| |||||||||  ||||| |||||||||||||||  |||||| |||||  |||||||||||| ||||  |||||||||||    
T  28140299 aaaacaacacttgcacaagcaatttataattttattgccgatcaatttgaatgtttgtgttttcttcataatgtgagagaaatttcagctaaacatggct 28140398  T
Q  286 taga 289  Q
    ||||    
T  28140399 taga 28140402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 289
Target Start/End: Original strand, 26812273 - 26812395
Alignment:
Q  167 tggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaa 266  Q
    ||||| ||||||| |||| ||||| |||||| |||  ||| ||||||||| ||||||||||||||||||  ||  |||||||||||||  |||| |||||    
T  26812273 tggaagtggaggattgggtaaaacgacacttactcgtgcactttataatttgattgctgatcaatttgatggtttgtgtttccttcacagtgtgcgagaa 26812372  T
Q  267 aattcacttaaacatggcttaga 289  Q
    |||||| ||||| ||||||||||    
T  26812373 aattcaattaaatatggcttaga 26812395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 290
Target Start/End: Complemental strand, 28097858 - 28097757
Alignment:
Q  189 acaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttag 288  Q
    |||||||||||  |||| ||||||||||  ||||||| |||||||||||||   |||||||||||| |||||||||||||||||   |||||||||||||    
T  28097858 acaacacttgcaaaagcggtttataatttcattgctggtcaatttgaatgtgtctgtttccttcacaatgtgagagaaaattcagcaaaacatggcttag 28097759  T
Q  289 ag 290  Q
    ||    
T  28097758 ag 28097757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 28243544 - 28243663
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaatt 270  Q
    ||||| ||||||||||| |||||||||||   ||||||||||||||| || |||||||||||||| |||   ||||| ||||||||||| || |||||||    
T  28243544 actggtggaatgggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgtaagggaaaatt 28243643  T
Q  271 cacttaaacatggcttagag 290  Q
    ||  |||| |||| ||||||    
T  28243644 caactaaatatggtttagag 28243663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 289
Target Start/End: Original strand, 29826731 - 29826853
Alignment:
Q  167 tggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaa 266  Q
    ||||| ||| ||| |||| |||||||||||||||| |||| ||||||||  ||||| |||| ||||||||||   |||||| ||||| ||  ||||||||    
T  29826731 tggaattggcggattgggtaaaacaacacttgctcgagcaatttataatatgattggtgataaatttgaatgcttgtgttttcttcatgacttgagagaa 29826830  T
Q  267 aattcacttaaacatggcttaga 289  Q
    | ||||  |||||||||||||||    
T  29826831 agttcagctaaacatggcttaga 29826853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 28235314 - 28235433
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaatt 270  Q
    ||||| ||||| ||||| |||||||||||   ||||||||||||||| || ||||||||||||||  ||  |||||| |||||||| || || |||||||    
T  28235314 actggtggaattggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttcttcacgacgtaagggaaaatt 28235413  T
Q  271 cacttaaacatggcttagag 290  Q
    ||  |||| |||| ||||||    
T  28235414 catctaaatatggtttagag 28235433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 290
Target Start/End: Complemental strand, 28297173 - 28297054
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaatt 270  Q
    |||||||| |||||||| |||||||||||   ||||||||||||||| || || |||||||||||  ||  |||||| |||||| |||| || |||||||    
T  28297173 actggagggatgggaaagacaacacttgccagagcagtttataattccatagccgatcaatttgatggtttgtgttttcttcacaatgtaagggaaaatt 28297074  T
Q  271 cacttaaacatggcttagag 290  Q
    ||  |||| |||| ||||||    
T  28297073 cagctaaatatggtttagag 28297054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 28514900 - 28515019
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaatt 270  Q
    |||||||| |||||||| |||||||||||   ||||||||||||||| || || |||||||||||  ||  |||||| |||||| |||| || |||||||    
T  28514900 actggagggatgggaaagacaacacttgccagagcagtttataattccatagccgatcaatttgatggtttgtgttttcttcacaatgtaagggaaaatt 28514999  T
Q  271 cacttaaacatggcttagag 290  Q
    ||  |||| |||| ||||||    
T  28515000 cagctaaatatggtttagag 28515019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 26056657 - 26056736
Alignment:
Q  157 taggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||||||  |||| || ||||| ||||| ||| ||||||||||  ||||||||| |||||| ||||||||||||||||||    
T  26056657 taggaatttttggtaccggaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaa 26056736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 26076627 - 26076706
Alignment:
Q  157 taggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||||||  |||| || ||||| ||||| ||| ||||||||||  ||||||||| |||||| ||||||||||||||||||    
T  26076627 taggaatttttggtaccggaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaa 26076706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 27604137 - 27604070
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    ||||||||| |||| ||| ||||||||||  ||||| |||||||||  ||||||||||||||||||||    
T  27604137 actggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatg 27604070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 27610553 - 27610486
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    ||||||||| |||| ||| ||||||||||  ||||| |||||||||  ||||||||||||||||||||    
T  27610553 actggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatg 27610486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 27717932 - 27717865
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    ||||||||| |||| ||| ||||||||||  ||||| |||||||||  ||||||||||||||||||||    
T  27717932 actggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatg 27717865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 29477495 - 29477436
Alignment:
Q  177 ggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    ||||| || |||||||||||||||| ||||||||||||| ||||| | ||||||||||||    
T  29477495 ggaatagggaaaacaacacttgctcgagcagtttataatacgatttcggatcaatttgaa 29477436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 26143612 - 26143682
Alignment:
Q  166 ttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||| |||||||| ||||| ||| ||||||||||  |||||||||||||||   |||||||||||||||||    
T  26143612 ttggtactggaggcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaa 26143682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 25511645 - 25511706
Alignment:
Q  175 gaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||| ||||| ||| ||||||||||  ||||||||| |||||| ||||||||||||||||||    
T  25511645 gaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaa 25511706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 25580471 - 25580536
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||||||| ||||| ||| ||||||||||  |||||||||||||||   |||||||||||||||||    
T  25580471 actggaggcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaa 25580536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 27677043 - 27676986
Alignment:
Q  181 tgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    |||||||| ||||||||||  ||||| |||||||||  ||||||||||||||||||||    
T  27677043 tgggaaaatcaacacttgcgaaagcaatttataattttattgctgatcaatttgaatg 27676986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 290
Target Start/End: Original strand, 28227707 - 28227820
Alignment:
Q  177 ggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcactta 276  Q
    ||||||||||| |||||||||||    |||||||||||||  || || |||||||||||  ||  |||||| ||||||||||| || |||||||||  ||    
T  28227707 ggaatgggaaagacaacacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagcta 28227806  T
Q  277 aacatggcttagag 290  Q
    || |||| ||||||    
T  28227807 aatatggtttagag 28227820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 28181866 - 28181930
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttga 235  Q
    ||||||||||||||||| || || |||||   ||||||||||||||| || ||||||||||||||    
T  28181866 actggaggaatgggaaagacgacgcttgcaagagcagtttataattccatagctgatcaatttga 28181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 272
Target Start/End: Original strand, 28186143 - 28186243
Alignment:
Q  172 ctggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattc 271  Q
    |||||||||||||||| || ||||||||   |||||||||||||||  | ||||||||||||||   |  |||||| ||||||||||| || | ||||||    
T  28186143 ctggaggaatgggaaagacgacacttgcaagagcagtttataattccctagctgatcaatttgatgatttgtgttttcttcacgatgtaaggggaaattc 28186242  T
Q  272 a 272  Q
    |    
T  28186243 a 28186243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 28326227 - 28326291
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttga 235  Q
    ||||| ||||||||||| |||||||||||   ||||||||||||||| || || |||||||||||    
T  28326227 actggtggaatgggaaagacaacacttgcaagagcagtttataattccatagccgatcaatttga 28326291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 28503863 - 28503927
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttga 235  Q
    ||||| ||||||||||| |||||||||||   ||||||||||||||| || || |||||||||||    
T  28503863 actggtggaatgggaaagacaacacttgcaagagcagtttataattccatagccgatcaatttga 28503927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 27337518 - 27337463
Alignment:
Q  181 tgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||||||| ||||||||||  ||||| |||||||||  ||||||||||||||||||    
T  27337518 tgggaaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaa 27337463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 27398258 - 27398203
Alignment:
Q  181 tgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||||||| ||||||||||  ||||| |||||||||  ||||||||||||||||||    
T  27398258 tgggaaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaa 27398203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 25483803 - 25483873
Alignment:
Q  166 ttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||| |||||||| ||||| ||| ||||||||||  ||||||||| |||||   |||||||||||||||||    
T  25483803 ttggtactggaggcatgggtaaatcaacacttgcaaaagcagtttttaattttcttgctgatcaatttgaa 25483873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 26937784 - 26937890
Alignment:
Q  177 ggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcactta 276  Q
    ||||| || ||| |||||||||| | |||| ||||||||| ||||| ||||||||||||| ||  |||||| |||||  ||||  |||||||| ||  ||    
T  26937784 ggaattggtaaatcaacacttgcacgagcaatttataatttgattggtgatcaatttgaaagtttgtgttttcttcataatgtacgagaaaatgcaacta 26937883  T
Q  277 aacatgg 283  Q
    |||||||    
T  26937884 aacatgg 26937890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 25539292 - 25539357
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||||||| ||||| ||| ||||||||||  ||||||||| |||||   |||||||||||||||||    
T  25539292 actggaggcatgggtaaatcaacacttgcaaaagcagtttttaattttgttgctgatcaatttgaa 25539357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 26656714 - 26656815
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaatt 270  Q
    |||||||| ||||| ||| ||||||||||  ||||| |||||||||   | ||||||||||||||| ||   ||||| |||||| |||| ||||| ||||    
T  26656714 actggaggcatgggtaaatcaacacttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaatt 26656813  T
Q  271 ca 272  Q
    ||    
T  26656814 ca 26656815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 26762685 - 26762786
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaatt 270  Q
    |||||||| ||||| ||| ||||||||||  ||||| |||||||||   | ||||||||||||||| ||   ||||| |||||| |||| ||||| ||||    
T  26762685 actggaggcatgggtaaatcaacacttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcagagagaatt 26762784  T
Q  271 ca 272  Q
    ||    
T  26762785 ca 26762786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 27530734 - 27530669
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    |||||||| || || ||| ||||||||||  ||||| |||||||||  ||||||||||||||||||    
T  27530734 actggaggcataggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaa 27530669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 27592444 - 27592387
Alignment:
Q  181 tgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    |||||||| ||||||||||  ||||| ||||||| |  ||||||||||||||||||||    
T  27592444 tgggaaaatcaacacttgcgaaagcaatttataactttattgctgatcaatttgaatg 27592387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 376
Target Start/End: Original strand, 26618539 - 26618618
Alignment:
Q  296 agctcctctccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattccagtcataaaacaaaggcta 376  Q
    ||||||||||||||| ||||||||| |||  |||| || ||| |||||| |||||| ||| || |||||||||| ||||||    
T  26618539 agctcctctccaaattaatcggattggaatttaag-ttcggagatgttagtgaagggatttcaatcataaaacacaggcta 26618618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 367
Target Start/End: Original strand, 26812444 - 26812480
Alignment:
Q  331 ttttggacatgttaatgaaggaattccagtcataaaa 367  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  26812444 ttttggacatgttagtgaaggaattccaatcataaaa 26812480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 26884819 - 26884887
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgt 239  Q
    ||||||||  |||| ||| ||||||||||  ||||| |||||||||   ||||||||||||||||||||    
T  26884819 actggaggcttgggtaaatcaacacttgcaaaagcaatttataattatgttgctgatcaatttgaatgt 26884887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 28901336 - 28901412
Alignment:
Q  159 ggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttga 235  Q
    |||||||  |||||||| ||||| || |||||||| ||| |||  |||||||||||||| ||||  |||||||||||    
T  28901336 ggaatccacggaactggtggaatagggaaaacaactctttctcttgcagtttataattcaattgtcgatcaatttga 28901412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 182; Significance: 3e-98; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 39 - 377
Target Start/End: Complemental strand, 17992780 - 17992435
Alignment:
Q  39 tccaacaagatcaaccatgctcctttgcatgttgctgattaccttgttggacttaaatctcgaatatcagaagtgaattcacttctagacttgggatcta 138  Q
    ||||||||||| ||||| | ||| || |||||||| ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||| || ||    
T  17992780 tccaacaagattaaccacgttccattacatgttgccgattaccttattggtctcaaatctcgaatatcagaagtgaattcacttctagacttggaatata 17992681  T
Q  139 atgatggagtctggaaaataggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    ||||||| ||||| | ||||||||||||||| ||||| |||||||| || ||||| |||||||||||||||||||||| | ||||| |||||||| ||||    
T  17992680 atgatggtgtctgcataataggaatccttggtactggtggaatgggcaagacaactcttgctcaagcagtttataatttggttgctaatcaatttcaatg 17992581  T
Q  239 taagtgtttccttcacgatgtgagagaaaattcacttaaacatggcttagagt--------gagcagctcctctccaaatcaatcggatttgaaactaag 330  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||||||||        |||||||| |||||||||||||||||||||| ||||||     
T  17992580 taagtgtttccttcacaatgtgagagaaaattcagtcaaacatggcttagagtatcttcaagagcagcttctctccaaatcaatcggatttgtaactaa- 17992482  T
Q  331 ttttggacatgttaatgaaggaattccagtcataaaacaaaggctat 377  Q
     |||||||||||||||||||| |||||| ||||||| ||||||||||    
T  17992481 atttggacatgttaatgaaggtattccaatcataaagcaaaggctat 17992435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 3280410 - 3280509
Alignment:
Q  173 tggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattca 272  Q
    |||||||||||| || ||||| |||||   ||||||||||||||  |||||| ||||||||||||||   ||||| |||||| |||||||||||||||||    
T  3280410 tggaggaatgggtaagacaactcttgcaagagcagtttataatttcattgctaatcaatttgaatgtgtatgttttcttcacaatgtgagagaaaattca 3280509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 167 - 376
Target Start/End: Original strand, 26136633 - 26136849
Alignment:
Q  167 tggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaa 266  Q
    ||||| ||||||| | || |||||||||||| ||| |||||||||||||| |||||| |||||||||||| |   ||| ||||||||| ||||| |||||    
T  26136633 tggaagtggaggattaggtaaaacaacacttactcgagcagtttataatttgattgcggatcaatttgaaggattgtgcttccttcacaatgtgcgagaa 26136732  T
Q  267 aattcacttaaacatggcttagagt--------gagcagctcctctccaaatcaatcggatttgaaactaagttttggacatgttaatgaaggaattcca 358  Q
    |||||| ||||| |||||||||| |        ||||||||||||||||||||||||||||| || | |||| || |||||||||| | |||||||||||    
T  26136733 aattcagttaaatatggcttagaatatctccaagagcagctcctctccaaatcaatcggattggagattaag-ttaggacatgttagtaaaggaattcca 26136831  T
Q  359 gtcataaaacaaaggcta 376  Q
     |||||||| ||||||||    
T  26136832 atcataaaagaaaggcta 26136849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 28163808 - 28163743
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaa 236  Q
    ||||||||  |||| ||| ||||||||||  ||||| |||||||||  ||||||||||||||||||    
T  28163808 actggaggcttgggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaa 28163743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 162 - 289
Target Start/End: Original strand, 16691607 - 16691734
Alignment:
Q  162 atccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtga 261  Q
    |||| ||||| ||||||||| || |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||  |||||| ||||| || ||||    
T  16691607 atccatggaattggaggaatcggtaaaacaacacttgctcgagcaatttataatttgattgctgatcaatttgaatgtttgtgttttcttcatgacgtga 16691706  T
Q  262 gagaaaattcacttaaacatggcttaga 289  Q
    |||||||||||  |||||||||||||||    
T  16691707 gagaaaattcatctaaacatggcttaga 16691734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 16691787 - 16691828
Alignment:
Q  335 ggacatgttaatgaaggaattccagtcataaaacaaaggcta 376  Q
    |||||||||| ||||||||||||| | |||||||||||||||    
T  16691787 ggacatgttagtgaaggaattccaataataaaacaaaggcta 16691828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 43706 - 43825
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaatt 270  Q
    ||||| ||||||||||| |||||||||||   ||||||||||||||| || |||||||||||||| |||   ||||| ||||||||||| || |||||||    
T  43706 actggtggaatgggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgtaagggaaaatt 43805  T
Q  271 cacttaaacatggcttagag 290  Q
    ||  |||| |||| ||||||    
T  43806 caactaaatatggtttagag 43825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 290
Target Start/End: Original strand, 35476 - 35595
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaatt 270  Q
    ||||| ||||| ||||| |||||||||||   ||||||||||||||| || ||||||||||||||  ||  |||||| |||||||| || || |||||||    
T  35476 actggtggaattggaaagacaacacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttcttcacgacgtaagggaaaatt 35575  T
Q  271 cacttaaacatggcttagag 290  Q
    ||  |||| |||| ||||||    
T  35576 catctaaatatggtttagag 35595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 290
Target Start/End: Original strand, 28205 - 28318
Alignment:
Q  177 ggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattcactta 276  Q
    ||||||||||| |||||||||||    |||||||||||||  || || |||||||||||  ||  |||||| ||||||||||| || |||||||||  ||    
T  28205 ggaatgggaaagacaacacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagcta 28304  T
Q  277 aacatggcttagag 290  Q
    || |||| ||||||    
T  28305 aatatggtttagag 28318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 57730 - 57608
Alignment:
Q  168 ggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaa 267  Q
    |||| ||||||||||||||| ||||||||||||  |||||||| |||||| || || |||||||||||   |  |||||| |||||||| || || ||||    
T  57730 ggaattggaggaatgggaaagacaacacttgctagagcagtttttaattccatagccgatcaatttgatgatttgtgttttcttcacgacgtaagggaaa 57631  T
Q  268 attcacttaaacatggcttagag 290  Q
    |||||  |||| |||| ||||||    
T  57630 attcagctaaatatggtttagag 57608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 272
Target Start/End: Complemental strand, 5090386 - 5090285
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaatt 270  Q
    |||||||||||||| ||||| |||||||   ||||| |||| ||||  |||||| ||||||||||||||   ||||| |||| | |||||||||||||||    
T  5090386 actggaggaatgggtaaaaccacacttggaaaagcaatttacaatttcattgctcatcaatttgaatgtctttgttttcttcccaatgtgagagaaaatt 5090287  T
Q  271 ca 272  Q
    ||    
T  5090286 ca 5090285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 18730931 - 18730866
Alignment:
Q  173 tggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    |||||| ||||||||| ||||||||||| ||| | |||||||||  ||||||||||||||||||||    
T  18730931 tggaggcatgggaaaatcaacacttgctaaagtaatttataattttattgctgatcaatttgaatg 18730866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 18698827 - 18698762
Alignment:
Q  173 tggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    |||||| ||||| ||| ||||||||||  ||||| |||||||||  ||||||||||||||||||||    
T  18698827 tggaggcatgggtaaatcaacacttgcgaaagcaatttataattttattgctgatcaatttgaatg 18698762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 18723512 - 18723447
Alignment:
Q  173 tggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    |||||| ||||||||| ||||||||||  ||| | |||||||||  ||||||||||||||||||||    
T  18723512 tggaggcatgggaaaatcaacacttgcaaaaggaatttataattttattgctgatcaatttgaatg 18723447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 5090523 - 5090476
Alignment:
Q  34 atgtctccaacaagatcaaccatgctcctttgcatgttgctgattacc 81  Q
    ||||||||||||||||||| ||  ||||||| ||||||||||||||||    
T  5090523 atgtctccaacaagatcaatcacactcctttacatgttgctgattacc 5090476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 272
Target Start/End: Complemental strand, 18654904 - 18654805
Alignment:
Q  173 tggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtgagagaaaattca 272  Q
    |||||| ||||||||| ||||||||||  || || || ||||||  ||||||||||||||||||||    ||||| ||| |  |||||||||||||||||    
T  18654904 tggaggcatgggaaaatcaacacttgcaaaatcaattaataattgtattgctgatcaatttgaatgctcatgttttcttgaaaatgtgagagaaaattca 18654805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 18678987 - 18678922
Alignment:
Q  173 tggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    |||||| ||||| |||  |||||||||  ||||| |||||||||  ||||||||||||||||||||    
T  18678987 tggaggcatgggtaaattaacacttgcaaaagcaatttataattttattgctgatcaatttgaatg 18678922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 2972 - 2905
Alignment:
Q  171 actggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatg 238  Q
    ||||||||| |||| ||| ||||||||||  ||||| |||||||||  ||||||||||||||||||||    
T  2972 actggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatg 2905  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 31697 - 31773
Alignment:
Q  159 ggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttga 235  Q
    |||||||  ||||| || ||||| || |||||||| ||||||||||| ||||||||||| ||||  |||||||||||    
T  31697 ggaatccacggaaccggtggaatagggaaaacaactcttgctcaagcggtttataattcaattgtagatcaatttga 31773  T

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Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 36446 - 36522
Alignment:
Q  159 ggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttga 235  Q
    |||||||  ||||| || ||||| || |||||||| ||||||||||| ||||||||||| ||||  |||||||||||    
T  36446 ggaatccacggaaccggtggaatagggaaaacaactcttgctcaagcggtttataattcaattgtagatcaatttga 36522  T

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Target: scaffold0007; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 67044 - 67120
Alignment:
Q  159 ggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttga 235  Q
    ||||||| |||||  || ||||| || |||||||| ||||||||||| ||||||||||| ||||  |||||||||||    
T  67044 ggaatccatggaatcggtggaatagggaaaacaactcttgctcaagcggtttataattcaattgtagatcaatttga 67120  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 272
Target Start/End: Original strand, 31905791 - 31905901
Alignment:
Q  162 atccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttgaatgtaagtgtttccttcacgatgtga 261  Q
    |||| ||||| |||||| || || ||||||||||||||||  || |||||||||  |||||| ||||| ||||||  |  |||||| ||| |  ||||||    
T  31905791 atccatggaagtggagggataggtaaaacaacacttgctctggctgtttataatctgattgccgatcactttgaagctttgtgttttcttgaaaatgtga 31905890  T
Q  262 gagaaaattca 272  Q
    |||||||||||    
T  31905891 gagaaaattca 31905901  T

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Target: scaffold0573 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 8458 - 8382
Alignment:
Q  159 ggaatccttggaactggaggaatgggaaaaacaacacttgctcaagcagtttataattcgattgctgatcaatttga 235  Q
    |||||||  |||||||| ||||| || |||||||| ||| |||  |||||||||||||| ||||  |||||||||||    
T  8458 ggaatccacggaactggtggaatagggaaaacaactctttctcttgcagtttataattcaattgtcgatcaatttga 8382  T

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