View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9730_low_31 (Length: 317)
Name: NF9730_low_31
Description: NF9730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9730_low_31 |
 |  |
|
| [»] scaffold0070 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 301
Target Start/End: Original strand, 453951 - 454235
Alignment:
| Q |
14 |
agattacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaa |
113 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
453951 |
agattacaccgacaatagctccgacttacaaaatatgcaagaccacaattcatacatgaaaacaacaagttatattcacaaccaagcaatacaaaagcaa |
454050 |
T |
 |
| Q |
114 |
gttcacatagtatgaaagcatggtacatcactatataaacatgttaaaacatcatcattttaacaacaagtaactacatatataaaatnnnnnnntggag |
213 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
454051 |
gttcacatagtatgaaagcagggta---cactatataaacatgttaaaacatcatcattttaacaacaagtaactacatatataaaataaaaaaatggag |
454147 |
T |
 |
| Q |
214 |
cgccctttcccttaccttaacaacagtagctcttctaaaagaatgcggagttgtccggctcgnnnnnnnnggcttgtgaggttaaggt |
301 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |||| |||||| | |||||||||||||||| |||||||||||||||||| |
|
|
| T |
454148 |
cgccctttcccgtaccttaacaacagtagcttttctgaaagaaggtggagttgtccggctcgaaaaaaaaggcttgtgaggttaaggt |
454235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 232
Target Start/End: Complemental strand, 29822899 - 29822683
Alignment:
| Q |
15 |
gattacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaag |
114 |
Q |
| |
|
||||||||||||| || || ||||| |||||| ||||||||||||||| || || ||||| |||||||| ||| ||||||||||||||||||||| |||| |
|
|
| T |
29822899 |
gattacaccgacagtaactccgactaacaaaatatgcaagaccacaatccaagcatgaaa-caacaagtcatactcacaaccaagcaatacaaaatcaag |
29822801 |
T |
 |
| Q |
115 |
ttcacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcatttt--aacaacaagtaactacatatataaaatnnnnnnntgg |
211 |
Q |
| |
|
||||||||||||| ||||||| || || || ||||||||||| |||||| |||| |||| || ||||||||| |||||||||||||| ||| |
|
|
| T |
29822800 |
ttcacatagtatgtaagcatgata---caatacataaacatgttaaaaacaccatccttttaaaaaaacaagtaaatacatatataaaataaaaaaatgg |
29822704 |
T |
 |
| Q |
212 |
agcgccctttcccttacctta |
232 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
29822703 |
agcgccctttcccttacctta |
29822683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 7093993 - 7094225
Alignment:
| Q |
15 |
gattacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaag |
114 |
Q |
| |
|
||||||||||||| || | |||| |||||| |||||||||| |||| || || ||||| |||||| ||||| ||||||||||||||||||||| |||| |
|
|
| T |
7093993 |
gattacaccgacagtaacgctgactaacaaaatatgcaagacctcaatccaggcatgaaa-caacaatttatactcacaaccaagcaatacaaaatcaag |
7094091 |
T |
 |
| Q |
115 |
ttcacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcatttt---aacaacaagtaactacatatataaaatnnnnnnntg |
210 |
Q |
| |
|
||||| ||||||| ||||||| || || || ||||||||||| ||||||||||| |||| || ||||||||| |||||||||||||| || |
|
|
| T |
7094092 |
ttcacctagtatgtaagcatgata---caatacataaacatgttaaaaacatcatccttttaaaaaaaacaagtaaatacatatataaaataaaaaaatg |
7094188 |
T |
 |
| Q |
211 |
gagcgccctttcccttaccttaacaacagtagctctt |
247 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||| |
|
|
| T |
7094189 |
gagcgccctttcccttaccttaacaatagcagctctt |
7094225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 7097726 - 7097958
Alignment:
| Q |
15 |
gattacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaag |
114 |
Q |
| |
|
||||||||||||| || | |||| |||||| |||||||||| |||| || || ||||| |||||| ||||| ||||||||||||||||||||| |||| |
|
|
| T |
7097726 |
gattacaccgacagtaacgctgactaacaaaatatgcaagacctcaatccaggcatgaaa-caacaatttatactcacaaccaagcaatacaaaatcaag |
7097824 |
T |
 |
| Q |
115 |
ttcacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcatttt---aacaacaagtaactacatatataaaatnnnnnnntg |
210 |
Q |
| |
|
||||| ||||||| ||||||| || || || ||||||||||| ||||||||||| |||| || ||||||||| |||||||||||||| || |
|
|
| T |
7097825 |
ttcacctagtatgtaagcatgata---caatacataaacatgttaaaaacatcatccttttaaaaaaaacaagtaaatacatatataaaataaaaaaatg |
7097921 |
T |
 |
| Q |
211 |
gagcgccctttcccttaccttaacaacagtagctctt |
247 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||| |
|
|
| T |
7097922 |
gagcgccctttcccttaccttaacaatagcagctctt |
7097958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 35 - 236
Target Start/End: Complemental strand, 19215752 - 19215546
Alignment:
| Q |
35 |
cgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaagttcac-------atagtatg |
127 |
Q |
| |
|
|||||||||||| |||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
19215752 |
cgacttacaaaatatgcaagaccacaattcagacatgaaaacaacaagttatactcacaaccaagcaatacaaaatcaagttcacatagcacatagtatg |
19215653 |
T |
 |
| Q |
128 |
aaagcatggtacatcactatataaacatgtt-aaaacatcatcattttaacaacaagtaactacatatataaaatnnnnnnntggagcgccctttccctt |
226 |
Q |
| |
|
|||||||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
19215652 |
taagcatggtacaatact---taaacatgttaaaaacatcatcattttaacaacaagtaaatacatatataaaatagaaaaatggagcgccctttccctt |
19215556 |
T |
 |
| Q |
227 |
accttaacaa |
236 |
Q |
| |
|
|||||||||| |
|
|
| T |
19215555 |
accttaacaa |
19215546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 138
Target Start/End: Original strand, 58833 - 58936
Alignment:
| Q |
35 |
cgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaagttcacatagtatgaaagcat |
134 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
58833 |
cgacttacaaaatatgcaagaccacaattcatgcatgaaaacaacaagttatattcacaaccaagcaatacaaaagcaagttcacataatatgaaagcag |
58932 |
T |
 |
| Q |
135 |
ggta |
138 |
Q |
| |
|
|||| |
|
|
| T |
58933 |
ggta |
58936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 41 - 201
Target Start/End: Original strand, 41313835 - 41313992
Alignment:
| Q |
41 |
acaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaagttcacatagtatgaaagcatggtaca |
140 |
Q |
| |
|
|||||| |||||||||| |||| || || ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| | |
|
|
| T |
41313835 |
acaaaatatgcaagacctcaatccaggcatgaaa-caacaagttatactcacaaccaagcaatacaaaatcaagttcacatagtatgtaagcatggtaaa |
41313933 |
T |
 |
| Q |
141 |
tcactatataaacatgtt-aaaacatcatcattttaacaacaagtaactacatatataaaat |
201 |
Q |
| |
|
||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41313934 |
atact---taaacatgttaaaaacatcatcattttaacaacaagtaactacatatataaaat |
41313992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 19632778 - 19632997
Alignment:
| Q |
15 |
gattacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaag |
114 |
Q |
| |
|
||||||||||||| || | | |||| |||||| |||||||||| |||| || || ||||| |||||||||||| ||||||| ||||||||||||| |||| |
|
|
| T |
19632778 |
gattacaccgacagtaacgttgactaacaaaatatgcaagacctcaatccaagcatgaaa-caacaagttatactcacaacgaagcaatacaaaatcaag |
19632876 |
T |
 |
| Q |
115 |
ttcacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcattt--taacaacaagtaactacatatataaaatnnnnnnntgg |
211 |
Q |
| |
|
||||||||||||| ||||||| || || |||||||||||||| ||||||||||| ||| || ||||||||| |||||||||||||| ||| |
|
|
| T |
19632877 |
ttcacatagtatgtaagcatgata---caatatataaacatgttaaaaacatcatcctttaaaaaaaacaagtaaatacatatataaaat-aaaaaatgg |
19632972 |
T |
 |
| Q |
212 |
agcgccctttcccttaccttaacaa |
236 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
19632973 |
agcgccctttcccttaccttaacaa |
19632997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 15 - 232
Target Start/End: Complemental strand, 2188126 - 2187911
Alignment:
| Q |
15 |
gattacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaag |
114 |
Q |
| |
|
||||||||||||| || | |||| |||||| |||||||||| |||| || || ||||| |||||||||||| |||||||||| |||||||||| |||| |
|
|
| T |
2188126 |
gattacaccgacagtaacgctgactaacaaaatatgcaagacctcaatccaagcatgaaa-caacaagttatactcacaaccaatcaatacaaaatcaag |
2188028 |
T |
 |
| Q |
115 |
ttcacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcatttt--aacaacaagtaactacatatataaaatnnnnnnntgg |
211 |
Q |
| |
|
||||||||||||| ||||||| || || || ||||||||||| ||||||||| | |||| || ||||||||| |||||||||||||| ||| |
|
|
| T |
2188027 |
ttcacatagtatgtaagcatgata---caatacataaacatgttaaaaacatcacccttttaaaaaaacaagtaaatacatatataaaat-aaaaaatgg |
2187932 |
T |
 |
| Q |
212 |
agcgccctttcccttacctta |
232 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
2187931 |
agcgccctttcccttacctta |
2187911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 232
Target Start/End: Original strand, 1608750 - 1608900
Alignment:
| Q |
79 |
caagttatattcacaaccaagcaatacaaaagcaagttcacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcattttaac |
177 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||| || || || ||||||||||| ||||||||||| ||| ||| |
|
|
| T |
1608750 |
caagttatactcacaaccaagcaatacaaaatcaaattcacatagtatgtaagcatgata---caatacataaacatgttaaaaacatcatcctttaaac |
1608846 |
T |
 |
| Q |
178 |
aacaagtaactacatatataaaatnnnnnnntggagcgccctttcccttacctta |
232 |
Q |
| |
|
||| ||||| |||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
1608847 |
aaccagtaaatacatatataaaat-aaaaaatggagcgcccttttccttacctta |
1608900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 11991989 - 11992171
Alignment:
| Q |
15 |
gattacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaag |
114 |
Q |
| |
|
|||||||||||||||| || ||||||||||| |||||||||| ||||||| | |||||||||| | ||||| ||||| ||||||||||||||| |||| |
|
|
| T |
11991989 |
gattacaccgacaataactcggacttacaaaatatgcaagaccgcaattcagacatgaaaacaacgaattatactcacagccaagcaatacaaaatcaag |
11992088 |
T |
 |
| Q |
115 |
ttcacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcattttaacaacaagtaactacatatataaaat |
201 |
Q |
| |
|
||| ||||||||| | |||||||| || || ||||| ||||| ||||||| ||| |||||||||||||||| |||||||||||||| |
|
|
| T |
11992089 |
ttc-catagtatgtatgcatggta---caatacataaatatgttaaaaacattatc-ttttaacaacaagtaaatacatatataaaat |
11992171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 37806392 - 37806590
Alignment:
| Q |
35 |
cgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaagttcacatagtatgaaagcat |
134 |
Q |
| |
|
||||| |||||| |||||||||| |||| || || ||||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
37806392 |
cgactaacaaaatatgcaagacctcaatccaggcatgaaat-aacaagttatactcacaacaaagcaatacaaaatcaagttcacatagtatgtaagcat |
37806490 |
T |
 |
| Q |
135 |
ggtacatcactatataaacatgt-taaaacatcatcatttt----aacaacaagtaactacatatataaaatnnnnnnntggagcgccctttcccttacc |
229 |
Q |
| |
|
| || || || |||||||||| ||||||||||| |||| || ||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
37806491 |
gata---caatacataaacatgtcaaaaacatcatccttttaaaaaaaaacaagtaaatacatatataaaataaaaaaatggagcgccctttcccttacc |
37806587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 33614526 - 33614635
Alignment:
| Q |
16 |
attacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaagt |
115 |
Q |
| |
|
|||||||| |||||| |||||||||||||| |||||||||||||||||| || | |||||||||| ||||| |||||||||| |||||||||| ||||| |
|
|
| T |
33614526 |
attacaccaacaataatttcgacttacaaaatatgcaagaccacaattcacgcataaaaacaacaaattatactcacaaccaaacaatacaaaatcaagt |
33614625 |
T |
 |
| Q |
116 |
tcacatagta |
125 |
Q |
| |
|
||| |||||| |
|
|
| T |
33614626 |
tcatatagta |
33614635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 232
Target Start/End: Original strand, 37627322 - 37627480
Alignment:
| Q |
73 |
aaacaacaagttatattcacaaccaagcaatacaaaagcaagttcacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcat |
171 |
Q |
| |
|
||||||||| ||||| |||||||||||||||| |||| ||||||||||||||||| ||||||| || || || ||||||||||| ||||||||||| | |
|
|
| T |
37627322 |
aaacaacaatttatactcacaaccaagcaatataaaatcaagttcacatagtatgtaagcatgata---caatacataaacatgttaaaaacatcatcct |
37627418 |
T |
 |
| Q |
172 |
ttt--aacaacaagtaactacatatataaaatnnnnnnntggagcgccctttcccttacctta |
232 |
Q |
| |
|
||| || ||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37627419 |
tttaaaaaaacaagtaaatacatatataaaat-aaaaaatggagcgccctttcccttacctta |
37627480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 14276172 - 14276344
Alignment:
| Q |
14 |
agattacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaa |
113 |
Q |
| |
|
|||||||| |||||||| || |||||||||| ||||||| || ||||||| |||||||||||| |||| ||||| |||| ||||||||||| |
|
|
| T |
14276172 |
agattacatcgacaataactctgacttacaaat-atgcaagtccgcaattcagatatgaaaacaacaaattatgctcacagccaa----tacaaaagcaa |
14276266 |
T |
 |
| Q |
114 |
gttcacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcattttaacaacaagtaactacata |
193 |
Q |
| |
|
|||||||||||||| |||||||||| || || ||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
14276267 |
gttcacatagtatgtaagcatggta---caatacataaacatgttaaaaacatcatcattttaacaacaagtaaatacata |
14276344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 236
Target Start/End: Original strand, 5187393 - 5187574
Alignment:
| Q |
53 |
agaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaagttcacatagtatgaaagcatggtacatcactatataaa |
152 |
Q |
| |
|
|||| ||||| || || |||||| || || ||||| ||||||||||||||| ||||||||||||||| ||||| | ||||||| |||| || ||||| |
|
|
| T |
5187393 |
agactacaatccaggcatgaaaataaaaaattatactcacaaccaagcaatccaaaagcaagttcacgtagtaagtaagcatgttacaatac---ataaa |
5187489 |
T |
 |
| Q |
153 |
catgttaaaa-catcatcattttaacaacaagtaactacatatataaaatnnnnnnntggagcgccctttcccttaccttaacaa |
236 |
Q |
| |
|
|||| |||| | |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
5187490 |
catgacaaaaacgtcatcattttaacaacaagtaaatacatatataaaataaaaaaatggagcgacctttcccttaccttgacaa |
5187574 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 247
Target Start/End: Complemental strand, 8377808 - 8377576
Alignment:
| Q |
15 |
gattacaccgacaatagcttcgacttacaaaagatgcaagaccacaattcatgcctgaaaacaacaagttatattcacaaccaagcaatacaaaagcaag |
114 |
Q |
| |
|
||||||||||||| || | |||| |||||| |||||||||| |||| || || ||||| |||||| ||||| ||||||||||||||||||||| ||| |
|
|
| T |
8377808 |
gattacaccgacagtaacgctgactaacaaaatatgcaagacctcaatccaggcatgaaa-caacaatttatactcacaaccaagcaatacaaaatcaat |
8377710 |
T |
 |
| Q |
115 |
tt-cacatagtatgaaagcatggtacatcactatataaacatgtt-aaaacatcatcattt--taacaacaagtaactacatatataaaatnnnnnnntg |
210 |
Q |
| |
|
|| || | | ||||||| || || || ||||||||||| ||||||||||| ||| ||| ||||||||| |||||||||||||| || |
|
|
| T |
8377709 |
ttatactaacaaaataagcatgata---caatacataaacatgttaaaaacatcatccttttataaaaacaagtaaatacatatataaaataaaaaaatg |
8377613 |
T |
 |
| Q |
211 |
gagcgccctttcccttaccttaacaacagtagctctt |
247 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8377612 |
gagcgccctttcccttaccttaacaacagcagctctt |
8377576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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