View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9730_low_35 (Length: 301)
Name: NF9730_low_35
Description: NF9730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9730_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 32001025 - 32000810
Alignment:
| Q |
18 |
tctacaatgatataaaagttaagcattttaaattattcataagtagattttcttgggaacattgtatggccaaaagggcactcaaaattttggggatcta |
117 |
Q |
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| T |
32001025 |
tctacaatgatataaaagttaagcattttaaattattcataagtagattttcttgggaacattgtatggccaaaagggcactcaaaattttggggatcta |
32000926 |
T |
|
| Q |
118 |
atatagtcctatggtagatctcatagactaacctgctacaagtttcaatttgttgttacccatttgcaataaatatatgnnnnnnnacagttgtaaataa |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32000925 |
atatagtcctatggtagatctcatagactaacctgctacaagtttcaatttgttgttacccatttgcaataaatatatg-ttttttacagttgtaaataa |
32000827 |
T |
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| Q |
218 |
ttatagtaacattgagt |
234 |
Q |
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||||||||||||||||| |
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| T |
32000826 |
ttatagtaacattgagt |
32000810 |
T |
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