View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9730_low_44 (Length: 253)

Name: NF9730_low_44
Description: NF9730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9730_low_44
NF9730_low_44
[»] chr8 (16 HSPs)
chr8 (17-167)||(33904888-33905038)
chr8 (169-239)||(11904854-11904924)
chr8 (168-234)||(12142081-12142147)
chr8 (165-239)||(35200553-35200627)
chr8 (167-238)||(41075709-41075780)
chr8 (199-239)||(10592007-10592047)
chr8 (167-238)||(31774723-31774794)
chr8 (176-239)||(45502670-45502733)
chr8 (170-239)||(28897997-28898066)
chr8 (163-238)||(2599526-2599601)
chr8 (176-239)||(8368482-8368545)
chr8 (173-240)||(16465722-16465789)
chr8 (170-239)||(1993751-1993820)
chr8 (163-220)||(14342319-14342376)
chr8 (170-239)||(43066015-43066084)
chr8 (170-239)||(45413649-45413718)
[»] chr7 (12 HSPs)
chr7 (165-239)||(28713674-28713748)
chr7 (167-239)||(38349570-38349642)
chr7 (167-238)||(42974490-42974561)
chr7 (169-239)||(37536426-37536496)
chr7 (168-239)||(13768373-13768444)
chr7 (170-240)||(33496501-33496571)
chr7 (175-238)||(11752604-11752667)
chr7 (174-240)||(31741049-31741115)
chr7 (170-220)||(46576372-46576422)
chr7 (174-239)||(38755006-38755071)
chr7 (174-239)||(47480124-47480188)
chr7 (170-239)||(48460661-48460730)
[»] chr5 (7 HSPs)
chr5 (168-239)||(43100319-43100390)
chr5 (167-239)||(12248272-12248344)
chr5 (168-239)||(33687647-33687718)
chr5 (170-239)||(13988249-13988318)
chr5 (174-239)||(35906000-35906065)
chr5 (170-239)||(36890379-36890448)
chr5 (169-234)||(6043007-6043070)
[»] chr2 (11 HSPs)
chr2 (165-239)||(40216406-40216480)
chr2 (170-238)||(33299981-33300049)
chr2 (170-239)||(13697076-13697145)
chr2 (170-227)||(17823581-17823638)
chr2 (170-239)||(32599359-32599428)
chr2 (170-238)||(14945848-14945916)
chr2 (164-239)||(24475812-24475887)
chr2 (170-239)||(40095265-40095334)
chr2 (163-239)||(4434701-4434777)
chr2 (170-238)||(14242627-14242695)
chr2 (171-239)||(36272772-36272840)
[»] chr3 (13 HSPs)
chr3 (164-239)||(36674630-36674705)
chr3 (172-240)||(33288136-33288204)
chr3 (170-236)||(23004758-23004824)
chr3 (173-239)||(48034920-48034986)
chr3 (163-239)||(39947268-39947344)
chr3 (165-239)||(9271107-9271181)
chr3 (165-219)||(29915090-29915144)
chr3 (165-219)||(29964243-29964297)
chr3 (170-239)||(12224114-12224183)
chr3 (170-239)||(50989205-50989274)
chr3 (170-239)||(51092337-51092406)
chr3 (171-239)||(38247801-38247869)
chr3 (164-239)||(46135523-46135598)
[»] chr1 (17 HSPs)
chr1 (165-239)||(47571674-47571748)
chr1 (174-239)||(29731194-29731259)
chr1 (167-239)||(26040969-26041041)
chr1 (168-240)||(7178221-7178293)
chr1 (168-239)||(48489449-48489520)
chr1 (170-239)||(39858349-39858418)
chr1 (175-239)||(19989246-19989310)
chr1 (170-240)||(1994955-1995025)
chr1 (170-239)||(527010-527079)
chr1 (170-220)||(27325758-27325808)
chr1 (170-220)||(44797596-44797646)
chr1 (170-239)||(6487730-6487799)
chr1 (170-239)||(13276575-13276644)
chr1 (161-234)||(33502640-33502713)
chr1 (170-239)||(46845767-46845836)
chr1 (171-239)||(15225102-15225170)
chr1 (171-239)||(40314095-40314163)
[»] chr4 (21 HSPs)
chr4 (165-238)||(48525323-48525396)
chr4 (171-239)||(51579323-51579391)
chr4 (170-239)||(5817491-5817560)
chr4 (170-239)||(43749094-43749163)
chr4 (158-239)||(50498200-50498281)
chr4 (172-239)||(36851231-36851298)
chr4 (171-233)||(3287087-3287149)
chr4 (165-239)||(37605802-37605876)
chr4 (168-238)||(41277215-41277285)
chr4 (165-239)||(55281205-55281279)
chr4 (170-239)||(17044005-17044074)
chr4 (170-239)||(22364572-22364641)
chr4 (170-239)||(24059244-24059313)
chr4 (170-239)||(25164582-25164651)
chr4 (170-239)||(51579583-51579651)
chr4 (164-239)||(42179248-42179323)
chr4 (170-239)||(20107112-20107182)
chr4 (170-236)||(25784022-25784088)
chr4 (174-240)||(26720011-26720077)
chr4 (170-240)||(32525132-32525202)
chr4 (164-238)||(45996006-45996080)
[»] chr6 (8 HSPs)
chr6 (174-239)||(12748217-12748282)
chr6 (170-235)||(16717992-16718059)
chr6 (170-239)||(34792762-34792831)
chr6 (167-239)||(29429583-29429655)
chr6 (170-239)||(14314097-14314166)
chr6 (171-220)||(1244686-1244735)
chr6 (171-240)||(32720362-32720431)
chr6 (170-238)||(9045835-9045903)


Alignment Details
Target: chr8 (Bit Score: 139; Significance: 8e-73; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 33904888 - 33905038
Alignment:
Q  17 cctccctccctcatcatagatacatatatagaatatgcatctaggatatatgtgagaaattagagactgaatcagccaacattaaatcagacttatgttg 116  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  33904888 cctccctccctcatcatagatacatatctagaatatgcatctaggatatatgggagaaattagagactgaataagccaacattaaatcagacttatgttg 33904987  T
Q  117 agttcttttaaaaacttttgcgttgatatccaagctttgtcttttataaaa 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33904988 agttcttttaaaaacttttgcgttgatatccaagctttgtcttttataaaa 33905038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 11904854 - 11904924
Alignment:
Q  169 ggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  11904854 ggtagtgatacataaaccaccttaggtggcatataccacttgtacacccacatataattgtgacatgtgtc 11904924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 12142081 - 12142147
Alignment:
Q  168 gggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacat 234  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||| |||||||||||||||||||    
T  12142081 gggtagtgatacataaaccaccttaggtggcatataccacttgtacatccacatataattgtgacat 12142147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 35200553 - 35200627
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||| |||||||||||||||||||||| |||  |||||  ||||||||||||||||||||||||||||||||||    
T  35200553 aaaggatagtgatacataaaccaccttaggtggcatatattacttgtacacccacatataattgtgacatgtgtc 35200627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 41075780 - 41075709
Alignment:
Q  167 agggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    ||||| |||||||||| ||||||||| |||  || ||||||||||||||||||||| |||||||||||||||    
T  41075780 agggtggtgatacatagaccaccttaggtgacatgtaccacttgtacacccacatacaattgtgacatgtgt 41075709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 10592007 - 10592047
Alignment:
Q  199 atataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10592007 atataccacttgtacacccacatataattgtgacatgtgtc 10592047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 31774723 - 31774794
Alignment:
Q  167 agggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    ||||| |||||||||| ||||||||| |||  || |||||||||||||| |||||| |||||||||||||||    
T  31774723 agggtggtgatacatagaccaccttaggtgacatgtaccacttgtacactcacatacaattgtgacatgtgt 31774794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 45502670 - 45502733
Alignment:
Q  176 atacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||||||||||| ||| |||||||||||||  || ||| ||||||||||||||||    
T  45502670 atacataaaccaccttaagtggtatgtaccacttgtacattcatatacaattgtgacatgtgtc 45502733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 28897997 - 28898066
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  ||||||||||| |||||||| | | ||||||||||||||||    
T  28897997 gtagtgatacatagaccaccttaggtggcatataccacttatacacccatacacaattgtgacatgtgtc 28898066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 2599526 - 2599601
Alignment:
Q  163 taaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    |||||| ||||||||||||| ||||||||| |||  || |||||||| |||||||| | | |||||||||||||||    
T  2599526 taaaagagtagtgatacatagaccaccttaggtggcatgtaccacttatacacccatacacaattgtgacatgtgt 2599601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 8368545 - 8368482
Alignment:
Q  176 atacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||| ||||||||| |||  || ||||||||||||||||||| | ||||||||||||||||    
T  8368545 atacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattgtgacatgtgtc 8368482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 16465789 - 16465722
Alignment:
Q  173 gtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtct 240  Q
    |||||||||| |||||||||   |  || ||||||||||| ||||||||| |||||||||||||||||    
T  16465789 gtgatacatagaccaccttagacggcatgtaccacttgtatacccacatacaattgtgacatgtgtct 16465722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 1993820 - 1993751
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || || |||||||||||||||| | |||| ||||| |||||    
T  1993820 gtagtgatacatagaccaccttaggtggcatgtatcacttgtacacccacacacaattttgacaagtgtc 1993751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 14342376 - 14342319
Alignment:
Q  163 taaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccaca 220  Q
    |||||| ||||||||||||| ||||||||| |||  || |||||||| ||||||||||    
T  14342376 taaaagagtagtgatacatagaccaccttaggtggcatgtaccacttatacacccaca 14342319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 43066084 - 43066015
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||| ||||| | |||| ||||| |||||    
T  43066084 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacatccacacacaattttgacaagtgtc 43066015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 45413718 - 45413649
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || |||||||| |||| ||| | | ||||||||||||||||    
T  45413718 gtagtgatacatagaccaccttaggtggcatgtaccacttatacatccatacacaattgtgacatgtgtc 45413649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 28713674 - 28713748
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  28713674 aaagggtagtgatacataaaccaccttaggtggcatataccacttgtacacccacatataattgtgacatgtgtc 28713748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 38349642 - 38349570
Alignment:
Q  167 agggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  38349642 agggtagtgatacataaaccatcttaggtggcatataccacttgtacacccacatataattgtgacatgtgtc 38349570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 42974561 - 42974490
Alignment:
Q  167 agggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    |||||||||||||||||||||||||| |||  || |||||||| |||||||||||| |||||||||||||||    
T  42974561 agggtagtgatacataaaccaccttaggtggcatgtaccacttatacacccacatacaattgtgacatgtgt 42974490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 37536496 - 37536426
Alignment:
Q  169 ggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||||| || |||| |||  ||||| ||| |||||||||||||||||||||||||||||||    
T  37536496 ggtagtgatacataaatcatcttaggtggcatatatcacatgtacacccacatataattgtgacatgtgtc 37536426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 13768373 - 13768444
Alignment:
Q  168 gggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||| |||||||||||||||||||  ||  |||||||||||| ||||| |||||||||||||| |||||||    
T  13768373 gggtaatgatacataaaccaccttagatgacatataccacttgcacacctacatataattgtgatatgtgtc 13768444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 33496501 - 33496571
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtct 240  Q
    |||| |||||||| ||||||||| |||  || |||||||||||||||||||||||||| ||||| ||||||    
T  33496501 gtagggatacatagaccaccttaggtgacatgtaccacttgtacacccacatataattttgacaagtgtct 33496571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 11752604 - 11752667
Alignment:
Q  175 gatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    |||||||| ||||||||| |||  || || |||||||||||| |||||||||||||||||||||    
T  11752604 gatacatagaccaccttaggtggcatgtatcacttgtacacctacatataattgtgacatgtgt 11752667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 31741049 - 31741115
Alignment:
Q  174 tgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtct 240  Q
    ||||||||| ||||||||| |||  || |||||||| |||||||| | | |||||||||||||||||    
T  31741049 tgatacatagaccaccttaggtggcatgtaccacttatacacccatacacaattgtgacatgtgtct 31741115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 46576422 - 46576372
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccaca 220  Q
    ||||||||||||| ||||||||| |||  || |||||||||||||||||||    
T  46576422 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccaca 46576372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 38755071 - 38755006
Alignment:
Q  174 tgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||| ||||||||| |||  || ||||||||| ||||||| | |||||| |||||||||||    
T  38755071 tgatacatagaccaccttaggtggcatgtaccacttgaacacccatacataattatgacatgtgtc 38755006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 47480188 - 47480124
Alignment:
Q  174 tgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||| ||||||||| |||  || ||||| ||||||||||| ||| ||||||||||||||||    
T  47480188 tgatacatagaccaccttaggtggcatgtaccatttgtacaccca-atacaattgtgacatgtgtc 47480124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 48460661 - 48460730
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||| ||||||| ||||||| |||| ||||| |||||    
T  48460661 gtagtgatacatagaccaccttaggtggcatgtaccatttgtacatccacatacaattttgacaagtgtc 48460730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 43100390 - 43100319
Alignment:
Q  168 gggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  43100390 gggtagtgatacataaaccatcttaggtggtatataccacttgtacacccacatataattgtgacatgtgtc 43100319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 12248272 - 12248344
Alignment:
Q  167 agggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||||||| ||||||| |||  |||||||||||||||| ||||||||||||||||||||||||    
T  12248272 agggtagtgatacataaatcaccttaggtggcatataccacttgtacatccacatataattgtgacatgtgtc 12248344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 33687647 - 33687718
Alignment:
Q  168 gggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||||||| || |||| |||  |||||||||||||||| ||| ||||||||||||||||||||    
T  33687647 gggtagtgatacataaatcatcttaggtggcatataccacttgtacatccatatataattgtgacatgtgtc 33687718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 13988249 - 13988318
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  13988249 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 13988318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 35906000 - 35906065
Alignment:
Q  174 tgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||| ||||||||| ||| ||| || ||||| |||||||| ||| ||||||||||||||||    
T  35906000 tgatacatagaccaccttaggtggtatgtatcacttatacacccatatacaattgtgacatgtgtc 35906065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 36890379 - 36890448
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  36890379 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 36890448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 6043007 - 6043070
Alignment:
Q  169 ggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacat 234  Q
    ||||||||||||||||| | |||| | || || ||||||||||||||||| |||||||||||||||    
T  6043007 ggtagtgatacataaacaatctta-gagt-atgtaccacttgtacacccatatataattgtgacat 6043070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 40216406 - 40216480
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||| |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||    
T  40216406 aaagggtagtgatatataaaccaccttagatgatatataccacttgtacacccacatataattgtgacatgtgtc 40216480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 33299981 - 33300049
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    ||||||||||||| |||||||||||||  || ||||| || |||||||| ||| |||||||||||||||    
T  33299981 gtagtgatacatagaccaccttaagtggcatgtaccatttatacacccatatacaattgtgacatgtgt 33300049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 13697145 - 13697076
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  13697145 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 13697076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 17823581 - 17823638
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataatt 227  Q
    |||||||||||||||||||||||  || ||| || |||||||||||||||||| ||||    
T  17823581 gtagtgatacataaaccaccttagatggtatgtatcacttgtacacccacatacaatt 17823638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 32599428 - 32599359
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||| ||||| |||||| ||||| |||||    
T  32599428 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacatccacacataattttgacaagtgtc 32599359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 14945916 - 14945848
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | || ||| ||||||||    
T  14945916 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaaatgtaacatgtgt 14945848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 24475887 - 24475812
Alignment:
Q  164 aaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||| ||| ||||||||| ||||||||| ||| ||| || ||||| |||||||| | | ||||||||||||||||    
T  24475887 aaaagagtaatgatacatagaccaccttaggtggtatgtatcacttatacacccatacacaattgtgacatgtgtc 24475812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 40095265 - 40095334
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| |||||||||  ||  || ||||||||||||| ||||||| |||| ||||| |||||    
T  40095265 gtagtgatacatagaccaccttagatgacatgtaccacttgtacatccacatacaattttgacaagtgtc 40095334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 4434777 - 4434701
Alignment:
Q  163 taaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||| ||||||||| ||| ||||||||| |||  || ||||||||||||  ||||| |  |||||||||||||||    
T  4434777 taaaagagtagtgatatatagaccaccttatgtggcatgtaccacttgtacttccacacactattgtgacatgtgtc 4434701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 14242695 - 14242627
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    ||||||||||||| |||| |||| ||| ||| |||||| |||||||||||| | |||| ||||| ||||    
T  14242695 gtagtgatacatagaccatcttaggtggtatgtaccacctgtacacccacacacaattttgacaagtgt 14242627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 36272840 - 36272772
Alignment:
Q  171 tagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||| ||||||||| |||  || |||||||| |||||||||| | |||| ||||| |||||    
T  36272840 tagtgatacatagaccaccttaggtggcatgtaccacttatacacccacacacaattttgacaagtgtc 36272772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 36674705 - 36674630
Alignment:
Q  164 aaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||| |||||||||||||||||||||||| |||  ||||||||||||||||| |||||||||||||||||||||||    
T  36674705 aaaatggtagtgatacataaaccaccttaggtgacatataccacttgtacactcacatataattgtgacatgtgtc 36674630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 33288136 - 33288204
Alignment:
Q  172 agtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtct 240  Q
    ||||||||||| ||||||||| ||| ||| ||||||||||||||||||| | |||||||| ||||||||    
T  33288136 agtgatacatagaccaccttaggtggtatgtaccacttgtacacccacacacaattgtgatatgtgtct 33288204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 23004758 - 23004824
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgt 236  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||||||||||||    
T  23004758 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattgtgacatgt 23004824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 48034986 - 48034920
Alignment:
Q  173 gtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||||||||| |||  || ||||||||||||||||||||| |||| ||||| |||||    
T  48034986 gtgatacataaaccaccttaggtgacatgtaccacttgtacacccacatacaattttgacaagtgtc 48034920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 39947344 - 39947268
Alignment:
Q  163 taaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||| || ||||| ||| |||||||||||||  || |||||||| |||||||||||| |||||||| |||||||    
T  39947344 taaaaggataatgatatatagaccaccttaagtgacatgtaccacttatacacccacatacaattgtgatatgtgtc 39947268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 9271107 - 9271181
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||| ||||||||||||| |||||||||  ||  || ||||||||||||||||||| |||||| ||||| |||||    
T  9271107 aaagagtagtgatacatagaccaccttagatggcatgtaccacttgtacacccacacataattttgacaagtgtc 9271181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 29915144 - 29915090
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccac 219  Q
    |||| ||||||||||||| ||||||||| |||  |||||||||||||||||||||    
T  29915144 aaagagtagtgatacatagaccaccttatgtggcatataccacttgtacacccac 29915090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 29964297 - 29964243
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccac 219  Q
    |||| ||||||||||||| ||||||||| |||  |||||||||||||||||||||    
T  29964297 aaagagtagtgatacatagaccaccttatgtggcatataccacttgtacacccac 29964243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 12224183 - 12224114
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||||||||||||| |||  || ||||| ||||||||||||| | |||| ||||| |||||    
T  12224183 gtagtgatacataaaccaccttaggtggcatgtaccatttgtacacccacacacaattttgacaagtgtc 12224114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 50989205 - 50989274
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  50989205 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 50989274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 51092337 - 51092406
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  51092337 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 51092406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 38247801 - 38247869
Alignment:
Q  171 tagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  38247801 tagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 38247869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 46135523 - 46135598
Alignment:
Q  164 aaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||| ||||||||||| |||| ||||| ||  || || || ||||||||| ||||| ||||||||||||||||    
T  46135523 aaaagggcagtgatacatagaccatcttaaatggcatgtatcatttgtacacctacatacaattgtgacatgtgtc 46135598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 47571748 - 47571674
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||| ||||||||||||| |||  |||| ||||||||||||||||||||||||||||||||||||    
T  47571748 aaagggtagtgatatataaaccaccttaggtgacatatgccacttgtacacccacatataattgtgacatgtgtc 47571674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 29731194 - 29731259
Alignment:
Q  174 tgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||    
T  29731194 tgatacataaaccaccttaggtggcatataccactagtacacccacatataattgtgacatgtgtc 29731259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 26040969 - 26041041
Alignment:
Q  167 agggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||| ||||||||||| |||  || ||||||||||||||||||||| ||||||||||||||||    
T  26040969 agggtagtgatacacaaaccaccttaggtggcatgtaccacttgtacacccacatacaattgtgacatgtgtc 26041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 7178293 - 7178221
Alignment:
Q  168 gggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtct 240  Q
    ||||||||||||||| ||||||||| |||  || ||||| ||||||||||||||| |||||||||| ||||||    
T  7178293 gggtagtgatacatagaccaccttaggtgacatgtaccatttgtacacccacatacaattgtgacaagtgtct 7178221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 48489449 - 48489520
Alignment:
Q  168 gggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||| ||||||||||| ||||||| |||  |||||||||||||||| ||| ||||||||||||||| ||||    
T  48489449 gggtaatgatacataaatcaccttaggtggcatataccacttgtacatccatatataattgtgacatctgtc 48489520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 39858349 - 39858418
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  ||||||||||| |||||||| | | ||||||||||||||||    
T  39858349 gtagtgatacatagaccaccttaggtggcatataccacttatacacccatacacaattgtgacatgtgtc 39858418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 19989246 - 19989310
Alignment:
Q  175 gatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||||||||  ||  |||||||||||||||| ||||||| || |||||||||||||    
T  19989246 gatacataaaccaccttagatgacatataccacttgtacatccacatacaagtgtgacatgtgtc 19989310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 1994955 - 1995025
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtct 240  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| ||||||    
T  1994955 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtct 1995025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 527079 - 527010
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || |||||||| |||||||| | | ||||||||||||||||    
T  527079 gtagtgatacatagaccaccttaggtggcatgtaccacttatacacccatacacaattgtgacatgtgtc 527010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 27325808 - 27325758
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccaca 220  Q
    ||||||||||||| ||||||||| |||  || |||||||||||||||||||    
T  27325808 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccaca 27325758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 44797646 - 44797596
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccaca 220  Q
    ||||||||||||| ||||||||| |||  || |||||||||||||||||||    
T  44797646 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccaca 44797596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 6487730 - 6487799
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||  ||| |||  || ||||||||||||| ||||| | ||||||||||||||||    
T  6487730 gtagtgatacatagaccaatttaggtggcatgtaccacttgtacatccacacacaattgtgacatgtgtc 6487799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 13276644 - 13276575
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| ||| ||| |||||||| ||||| || | | |||| |||||||||||    
T  13276644 gtagtgatacatagaccaccttaggtggtatgtaccacttatacactcatacacaattatgacatgtgtc 13276575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 33502713 - 33502640
Alignment:
Q  161 tataaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacat 234  Q
    |||| ||||||||||||||||| ||||| |||  ||  || ||||||||||||||| ||||  |||||||||||    
T  33502713 tatataagggtagtgatacatagaccacattagatgacatgtaccacttgtacacctacatgcaattgtgacat 33502640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 46845836 - 46845767
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| |||||||||  ||  || |||||||| |||||||| | | ||||||||||||||||    
T  46845836 gtagtgatacatagaccaccttagatggcatgtaccacttatacacccatacacaattgtgacatgtgtc 46845767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 15225170 - 15225102
Alignment:
Q  171 tagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||| ||||||||| |||  || ||| |||| |||||||||||  ||||||||||| ||||    
T  15225170 tagtgatacatagaccaccttaggtggcatgtacaacttatacacccacatgcaattgtgacatatgtc 15225102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 40314095 - 40314163
Alignment:
Q  171 tagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||||||||||||| ||  ||| ||||| || |||| ||| | | ||||||||||||||||    
T  40314095 tagtgatacataaaccaccttaggtagtatgtaccatttatacatccatacacaattgtgacatgtgtc 40314163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 48525323 - 48525396
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||| |||||||||||||||||||||||    
T  48525323 aaagggtagtgatacataaaccactttaggtggcatataccacttgtacatccacatataattgtgacatgtgt 48525396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 51579323 - 51579391
Alignment:
Q  171 tagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||||||||| ||||||||| |||  || ||||||||||||||||||||| ||||||||||||||||    
T  51579323 tagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacatacaattgtgacatgtgtc 51579391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 5817560 - 5817491
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| |||| |||| |||  || ||||||||||||||||||| | ||||||||||||||||    
T  5817560 gtagtgatacatagaccatcttaggtggcatgtaccacttgtacacccacacacaattgtgacatgtgtc 5817491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 43749094 - 43749163
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| |||||| ||||| |||||    
T  43749094 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacataattttgacaagtgtc 43749163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 50498200 - 50498281
Alignment:
Q  158 ttttataaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||| ||||||||||||| | ||||||| ||  ||| |||||||| |||||||| | | ||||||||||||||||    
T  50498200 ttttataaaagagtagtgatacatagatcaccttaggtagtatgtaccacttatacacccatacacaattgtgacatgtgtc 50498281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 36851231 - 36851298
Alignment:
Q  172 agtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||| |||| |||||||||||||  || ||||||||||||||||||  || |||||||||||||||    
T  36851231 agtgatgcatagaccaccttaagtggcatgtaccacttgtacacccacgcatgattgtgacatgtgtc 36851298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 3287087 - 3287149
Alignment:
Q  171 tagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgaca 233  Q
    ||||||||||||||||||||||  || ||| ||||||||||||||||||| | |||| |||||    
T  3287087 tagtgatacataaaccaccttagatggtatgtaccacttgtacacccacacacaattttgaca 3287149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 37605876 - 37605802
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||| ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  37605876 aaagagtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 37605802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 41277215 - 41277285
Alignment:
Q  168 gggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    |||| |||||||||| | ||||||| |||  || |||||| |||||||||||||| |||||||||||||||    
T  41277215 gggtggtgatacatagatcaccttaggtgacatgtaccacctgtacacccacatacaattgtgacatgtgt 41277285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 55281205 - 55281279
Alignment:
Q  165 aaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||| ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  55281205 aaagagtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 55281279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 17044005 - 17044074
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  17044005 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 17044074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 22364641 - 22364572
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||||| || |||| |||  ||||||||||| |||||||| ||| |||||||| |||||||    
T  22364641 gtagtgatacataaatcaacttaggtggcatataccacttatacacccatatacaattgtgatatgtgtc 22364572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 24059313 - 24059244
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| |||||||||  ||  || || || ||||||||||||||| ||||||||||||||||    
T  24059313 gtagtgatacatagaccaccttagatggcatgtatcatttgtacacccacatacaattgtgacatgtgtc 24059244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 25164651 - 25164582
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  25164651 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 25164582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 51579583 - 51579651
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||| | ||||||||| |||  || ||||||||||||||||| ||| ||||||||||||||||    
T  51579583 gtagtgataca-agaccaccttaggtggcatgtaccacttgtacacccaaatacaattgtgacatgtgtc 51579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 42179323 - 42179248
Alignment:
Q  164 aaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||| ||| ||||||||| ||||||||| ||| ||| |||||||| ||||||||   | ||||||||||||||||    
T  42179323 aaaagagtaatgatacatagaccaccttaggtggtatgtaccacttatacacccatgcacaattgtgacatgtgtc 42179248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 20107112 - 20107182
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtaca-cccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||| ||| || | ||||||||||||||||    
T  20107112 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacaccccgcacacaattgtgacatgtgtc 20107182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 25784088 - 25784022
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgt 236  Q
    ||||||||||||| | || |||| |||  || ||||||||||||| ||||| |||||||||||||||    
T  25784088 gtagtgatacatagatcatcttaggtggcatgtaccacttgtacatccacacataattgtgacatgt 25784022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 26720077 - 26720011
Alignment:
Q  174 tgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtct 240  Q
    ||||||||||||||||||| |||   | |||||||| |||||||||||  |||||| ||||||||||    
T  26720077 tgatacataaaccaccttaggtggcgtgtaccacttctacacccacattcaattgtaacatgtgtct 26720011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 32525202 - 32525132
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtct 240  Q
    ||||||||||||| |||| |||| |||  ||||||||||| |||| ||||| | |||||||| ||||||||    
T  32525202 gtagtgatacatagaccatcttaggtggcatataccacttatacatccacacacaattgtgatatgtgtct 32525132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 45996080 - 45996006
Alignment:
Q  164 aaaagggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    ||||| ||||||||||||| |||| |||| |||  || ||||||||||||||||||| | |||| ||||| ||||    
T  45996080 aaaagagtagtgatacatagaccatcttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgt 45996006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 12748217 - 12748282
Alignment:
Q  174 tgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||| ||||    
T  12748217 tgatacataaaccactttaggtggcatataccacttgtacacccacatataattgtgacatctgtc 12748282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 16717992 - 16718059
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacc--cacatataattgtgacatg 235  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||  |||||||||||||||||||    
T  16717992 gtagtgatacataaaccaccttaggtggcatataccacttgtacacccacacatataattgtgacatg 16718059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 34792831 - 34792762
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || |||||||||||||||||||||||||| ||||| |||||    
T  34792831 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacatataattttgacaagtgtc 34792762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 29429583 - 29429655
Alignment:
Q  167 agggtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    |||||| ||||||| | || |||||| |||  || ||||||||||||||||||||| ||||||||||||||||    
T  29429583 agggtactgatacacagactaccttaggtggcatgtaccacttgtacacccacatacaattgtgacatgtgtc 29429655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 14314166 - 14314097
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtc 239  Q
    ||||||||||||| ||||||||| |||  || ||||||||||||||||||| | |||| ||||| |||||    
T  14314166 gtagtgatacatagaccaccttaggtggcatgtaccacttgtacacccacacacaattttgacaagtgtc 14314097  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 1244735 - 1244686
Alignment:
Q  171 tagtgatacataaaccaccttaagtgttatataccacttgtacacccaca 220  Q
    |||||||||||| |||||||||||||  || ||||||||||||| |||||    
T  1244735 tagtgatacatagaccaccttaagtggcatgtaccacttgtacatccaca 1244686  T

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Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 32720362 - 32720431
Alignment:
Q  171 tagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgtct 240  Q
    |||||||||||| |||||||||||||| || || || |||||||  || |||||||| |||||| |||||    
T  32720362 tagtgatacatagaccaccttaagtgtcatgtatcatttgtacattcaaatataattatgacatttgtct 32720431  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 9045835 - 9045903
Alignment:
Q  170 gtagtgatacataaaccaccttaagtgttatataccacttgtacacccacatataattgtgacatgtgt 238  Q
    ||||||||||||| ||||||||| |||  || || |||||||||||||||| | |||| ||||| ||||    
T  9045835 gtagtgatacatagaccaccttaggtggcatgtatcacttgtacacccacacacaattttgacaagtgt 9045903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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