View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9731_high_17 (Length: 377)
Name: NF9731_high_17
Description: NF9731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9731_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 98 - 373
Target Start/End: Original strand, 42886482 - 42886766
Alignment:
| Q |
98 |
agcttatacacgcaaaaaagaattcccaaaatt-----------catgaattatttaacatgtttttcaatnnnnnnnntgctttagaataatccaatct |
186 |
Q |
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| T |
42886482 |
agcttatgcacgcaaaaaagaattcccaaaatttatttcattatcatgaattatttaacatgtttttcaataaaaaa--tgctttagaataatccaatct |
42886579 |
T |
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| Q |
187 |
atggaaatcaagacaaattcccaaattaacttctttggnnnnnnnccttttctaattaacctttaaatctaggtgtattcttactttagacaagatgtta |
286 |
Q |
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| T |
42886580 |
atggaaatcaagacaaattcccaaattaacttctttggtttttttccttttctaattaacctttaaatctaggtgtattcttactttagacaagatggta |
42886679 |
T |
|
| Q |
287 |
gatctatcatcctttctagcaaggaggatatatatgcaatcgctctcttaaactttaattatttcttcttccttgtttcctttgctt |
373 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
42886680 |
gatctatcatcctttctagcaaggaggatatatatgcaatcgctctcttaaactttaattatttcttcttccttgtttcttttgctt |
42886766 |
T |
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