View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9731_high_26 (Length: 251)
Name: NF9731_high_26
Description: NF9731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9731_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 27741292 - 27741522
Alignment:
| Q |
1 |
tcttaatactaataaaccttgtagctatgttacaccaatgaatggttctcaattttgttataccaatggttcttaattttgttctatatgttttttgtgt |
100 |
Q |
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| T |
27741292 |
tcttaatactaataaaccttgtagctatgttacaacaatgaatggttctcaattttgttataccaatggttcttaattttgttctatatgtt-------- |
27741383 |
T |
|
| Q |
101 |
ttgtgctttgttatgctatgctatattataagggacagtgcgtgtttggtggcacgccataggtgactatttccattgttcacgctgctttcttttgagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27741384 |
-tgtgctttgttatgctatgctatattataagggacattgcgtgtttggtggcacgccataggtgactatttccattgttcacgctgctttcttttgagg |
27741482 |
T |
|
| Q |
201 |
gaaaataatggtggaacattaatagtggctatgggcctatg |
241 |
Q |
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|||||||||||| |||||||||||||||||||||||||||| |
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| T |
27741483 |
gaaaataatggt-gaacattaatagtggctatgggcctatg |
27741522 |
T |
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