View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9731_low_3 (Length: 669)
Name: NF9731_low_3
Description: NF9731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9731_low_3 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 576; Significance: 0; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 576; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 5310378 - 5311013
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310378 |
cattggatgcaaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
5310477 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
5310478 |
gattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagctgattatcaactcacaaaactcttgggccttcgtccatatgtgaaaagg |
5310577 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310578 |
tatatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgttt |
5310677 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
5310678 |
gttctgaagtcaccgctgtcacatttcgtggccccagtgatactcacttggacagccttgttgggcaagcattgtttggagatggagctgctgctcttat |
5310777 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5310778 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaacaattgctcctgatagtgaaggagccattgatggt |
5310877 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310878 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
5310977 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310978 |
tgggaatttctgattacaactcaatcttttggattg |
5311013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 572; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Complemental strand, 5289838 - 5289203
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289838 |
cattggatgctaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
5289739 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
5289738 |
gattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagccgattatcaactcacaaaactcttgggtcttcgtccatatgtgaaaagg |
5289639 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289638 |
tatatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgttt |
5289539 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
5289538 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctcttat |
5289439 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
5289438 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaacaattgctccggatagtgaaggagccattgatggc |
5289339 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5289338 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtttcaaagaacatcactaaagcattggttgaggctttcgagccat |
5289239 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289238 |
tgggaatttctgattacaactcaatcttttggattg |
5289203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 564; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 5284289 - 5284924
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
5284289 |
cattggatgcaaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggccaaccaaagtcaaa |
5284388 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284389 |
gattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
5284488 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284489 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
5284588 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| || ||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||| || |
|
|
| T |
5284589 |
gttctgaagtcaccgctgtcacatttcgtggccctagcgatactcacttagacagtcttgttggacaagcactatttggagatggagctgctgctcttat |
5284688 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5284689 |
tgttggctctgacccaataccagaaattgagagacctatatttgagatggtttggactgcacaaacaattgctcctgatagtgaaggagccattgatggt |
5284788 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5284789 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtttcaaagaacattactaaagcattggttgaggcttttgagccat |
5284888 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284889 |
tgggaatttctgattacaactcaatcttttggattg |
5284924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 5302477 - 5303112
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5302477 |
cattggatgctaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
5302576 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5302577 |
gattactcacttaatcgtttgcaccacaagtggtgtagacatgcccgaagctgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
5302676 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5302677 |
tacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaagatctagctgagaacaacaaaggtgctcgtgtgttggttgtat |
5302776 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
|||| || ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| || |
|
|
| T |
5302777 |
gttcagaggtcaccgctgtcacatttcgtggccctagtgatactcacttggacagtcttgttggacaagcactatttggagatggagctgctgctcttat |
5302876 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5302877 |
tgttggctctgaccccgtaccagaaattgagaaacctatatttgagatggtttggactgcacaaacaattgctcctgatagtgaaggagccattgatggt |
5302976 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
5302977 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtttcaaagaacattactaaagcattggttgacgcttttgagccac |
5303076 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
5303077 |
tgggaatttctgattacaactcaatcttttggattg |
5303112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 5315092 - 5315727
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5315092 |
cattggatgctaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
5315191 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
5315192 |
gattactcacttaatcgtttgcaccacaagtggtgttgacatgcctggagcagattatcaactcaccaaactattaggtcttcgcccatatgtgaaaaga |
5315291 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||||| || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5315292 |
tacatgatgtaccaacaagggtgctttgcaggtggcacggtgctccgtttggctaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgttt |
5315391 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||| || |
|
|
| T |
5315392 |
gttctgaagtcaccgctgtcacatttcgtggtcctagtgatactcacttagacagccttgttggacaagcactatttggagatggagcggctgctcttat |
5315491 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5315492 |
tgttggctctgacccagtaccagaaatagagaaacctatatttgagatggtttggactgcacaaacaattgctcctgatagtgaaggagccattgatggt |
5315591 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5315592 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtttcaaagaacattactaaagcattggttgaggctttcgagccat |
5315691 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
5315692 |
tgggaatttctgattacaactcaatcttttggattg |
5315727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Complemental strand, 46707129 - 46706494
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46707129 |
cattggatgccaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
46707030 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
|||||| ||||||||||||||||| || ||||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
46707029 |
gattacccacttaatcgtttgcactactagtggtgtagacatgcctggagctgattaccaactcacaaaactcttcggtcttcgcccatatgtgaaaagg |
46706930 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|| ||||||||||||||||| || |||||||| || |||| ||||||||||| || ||||| |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
46706929 |
tatatgatgtaccaacaaggttgctttgcaggaggcacggggcttcgtttggctaacgatttggctgagaacaacaaaggtgcccgtgtattggttgttt |
46706830 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || || |
|
|
| T |
46706829 |
gttctgaagtcactgcagtcacattccgcggccctagtgatactcacttggacagccttgttgggcaagcactgtttggagtcagagctgctgcacttat |
46706730 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
46706729 |
tgttggttctgatccagtaccagaaattgagaaacctatatttgagatggtttggacttcacaaacaattgctccagatagtgaaggagccattgatggt |
46706630 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| | |||| |
|
|
| T |
46706629 |
caccttcgtgaagctggactaacattccaccttctaaaagatgttcctgggattgtttcaaagaacattgataaagcattagttgaggctttccaaccat |
46706530 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
46706529 |
tgggaatttctgattacaactcaatcttttggattg |
46706494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 476; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 44132760 - 44133395
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
44132760 |
cattggatgctaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaa |
44132859 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
44132860 |
gattactcacttgatcgtttgcaccacaagtggtgtagacatgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaagg |
44132959 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|| ||||||||||||||||| || |||||||| || ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
44132960 |
tatatgatgtaccaacaaggttgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtct |
44133059 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||||||||||| || |||||||| || ||||| ||||||||||||||||||||||||||||| || || || |||||||||||||||||||| || || |
|
|
| T |
44133060 |
gttctgaagtcactgcagtcacatttcgcggccctagtgatactcacttggacagccttgttggacaggccctatttggagatggagctgctgcactaat |
44133159 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
44133160 |
tgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggactgcacaaacaattgctccagatagtgaaggagccattgatggt |
44133259 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||| |
|
|
| T |
44133260 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtttcaaagaacatcaataaagcattggttgaggctttcgaaccat |
44133359 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
44133360 |
taggaatttctgattacaattcaatcttttggattg |
44133395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 44141182 - 44141817
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
44141182 |
cattggatgctaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaa |
44141281 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
44141282 |
gattactcacttgatcgtttgcaccacaagtggtgtagacatgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaagg |
44141381 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|| ||||||||||||||||| || |||||||| || ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
44141382 |
tatatgatgtaccaacaaggttgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtct |
44141481 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||||||||||| || |||||||| || ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || || |
|
|
| T |
44141482 |
gttctgaagtcactgcagtcacatttcgcggccctagtgatactcacttggacagccttgttggacaagcactatttggagatggagctgctgcactaat |
44141581 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| ||| |
|
|
| T |
44141582 |
tgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggactgcacaaacaattgctccagatagtgaaggggccattgacggt |
44141681 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||| |
|
|
| T |
44141682 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtttcaaagaacatcaataaagcattggttgaggctttcgaaccat |
44141781 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
44141782 |
taggaatttctgattacaattcaatcttttggattg |
44141817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 44128555 - 44129190
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
44128555 |
cattggatgctaggcaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaa |
44128654 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
44128655 |
gattactcacttgatcgtttgcaccacaagtggtgtagacatgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaagg |
44128754 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|| ||||||||||||||||| || |||||||| || ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
44128755 |
tatatgatgtaccaacaaggttgctttgcaggaggcacggtccttcgtttggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtct |
44128854 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||||||||||| || |||||||| || ||||| ||||||||||||||||||||||||||||| || || || |||||||||||||||||||| || || |
|
|
| T |
44128855 |
gttctgaagtcactgcagtcacatttcgcggccctagtgatactcacttggacagccttgttggacaggccctatttggagatggagctgctgcactaat |
44128954 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
44128955 |
tgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggactgcacaaacaattgctccagatagtgaaggagccattgatggt |
44129054 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||||||||| |||| |
|
|
| T |
44129055 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtttcaaagaacatcaataaagctttggttgaggctttcgaaccat |
44129154 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
44129155 |
taggaatttctgattacaattcaatcttttggattg |
44129190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 444; Significance: 0; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 1492149 - 1492784
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492149 |
cattggatgctagacaagacatggtggtggtagaagtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
1492248 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||| ||||| |
|
|
| T |
1492249 |
gattactcacttaatcgtttgcaccacaagcggtgtagacatgcctggggccgattatcaactcactaaactcttaggtcttcgtccatatgtaaaaaga |
1492348 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
1492349 |
tacatgatgtaccagcaaggttgttttgcaggtggcacggtacttcgtttggctaaggatttggctgagaacaacaaaggtgctcgtgtgttagttgttt |
1492448 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||||||||||| || |||||||| ||||| ||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||| ||||| || || |
|
|
| T |
1492449 |
gttctgaagtcactgcagtcacatttcgtggtcccagtgatacacacttggacagtcttgttggacaagcactatttggagatggagcagctgcacttat |
1492548 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|||||| ||||| || |||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
1492549 |
tgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggacagcacaaacaattgctcctgatagtgaaggtgccattgatggt |
1492648 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| || || | ||||||||| |||||||||||| | |||| |
|
|
| T |
1492649 |
catcttcgtgaagctgggttaacatttcaccttcttaaagatgttcctgggattgtgtcaaaaaatataaataaagcattagttgaggctttccaaccat |
1492748 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1492749 |
tgggaatctctgattacaactcaatcttttggattg |
1492784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 1504958 - 1505593
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||||||||| ||||||||||| |
|
|
| T |
1504958 |
cattggatgctaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgccgtaaaagctataaaagaatggggtcagccaaagtcaaa |
1505057 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||| |
|
|
| T |
1505058 |
gattactcacttaattgtttgcaccacaagtggtgtagacatgcctggagctgattaccaactcaccaaactcttaggtcttcgcccatatgtgaagagg |
1505157 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| || || |||||||||||||||||||| |||||||||||||| | |
|
|
| T |
1505158 |
tacatgatgtaccagcaaggatgttttgcaggtgggacggtgcttcgtttggccaaggacttggctgagaacaacaaaggtgcccgtgtgttggttgtct |
1505257 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
|||| |||||||| || |||||||| || ||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||| || || |
|
|
| T |
1505258 |
gttccgaagtcactgcagtcacatttcgcggccctagtgatactcacttggacagccttgttggacaagctctatttggagatggagctgctgcactaat |
1505357 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
||||||||| || ||| |||||||||||||||||||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||||| ||| |
|
|
| T |
1505358 |
tgttggttcagatccaataccagaaattgagaaacctatatttgaaatggtttggactgcacaaacaatcgcgcctgatagcgaaggagccattgacggt |
1505457 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||| |||||| | |||| |
|
|
| T |
1505458 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgaaattgtttcaaagaacatcaataaagcattggttgatgctttccaaccat |
1505557 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
| ||| ||||||| |||||||||||||| ||||||| |
|
|
| T |
1505558 |
taggagtttctgactacaactcaatcttctggattg |
1505593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 1477980 - 1478615
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || || ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||| |
|
|
| T |
1477980 |
cattggatgctaggcaggacatggtggtggtagaagtacctagactaggaaaggaggctgcagtgaaagctataaaagaatggggccaaccaaaatcaaa |
1478079 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
|||||| ||||| ||| |||||||||||||||| |||||||||||||| || ||||| ||||||||||||||||| |||||||| ||||||||||| ||| |
|
|
| T |
1478080 |
gattacacacttgatcttttgcaccacaagtggtgtagacatgcctggcgctgattaccaactcaccaaactcttaggtcttcgtccatatgtgaagagg |
1478179 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1478180 |
tatatgatgtaccaacaaggatgttttgcaggtgggacggtgcttcgtttggccaaggacttggctgagaacaataaaggtgctcgtgtgttggttgttt |
1478279 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
|||||||||| || || || ||||||||||| || ||||||||||| |||||||| |||||||| |||||||| ||||||||||| |||||||| || || |
|
|
| T |
1478280 |
gttctgaagttactgcagtgacattccgtggtcctagtgatactcatttggacagtcttgttggacaagcactatttggagatggtgctgctgcactcat |
1478379 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||||||||| |
|
|
| T |
1478380 |
tgttggttctgacccaataccagaaattgagaaacctatatttgagatggtttggactgcacaaacaattgctccagacagtgagggagccattgatggt |
1478479 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||| | |||| |
|
|
| T |
1478480 |
caccttcgtgaagctggtctaacatttcaccttcttaaagatgttcctgggattgtttcaaagaacattgataaagcattggtcgaggctttccaaccat |
1478579 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
| || |||||||| || |||||||| ||||||| |
|
|
| T |
1478580 |
taaacatctctgattataattcaatcttctggattg |
1478615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 1482174 - 1482809
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
1482174 |
cattggatgctaggcaagacatggtggtggtagaggtgcctagactaggaaaggaggctgcagtgaaggctataaaagaatggggccaaccaaaatcaaa |
1482273 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
|||||| |||||||| |||| ||||||||||| |||||||||||||| |||||||| |||||||| |||||||| |||||||| ||||||||||| || |
|
|
| T |
1482274 |
gattacacacttaatattttgtaccacaagtggtgtagacatgcctggtgccgattaccaactcacaaaactcttaggtcttcgtccatatgtgaagaga |
1482373 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || |||||||| || ||||||||||||||||||||||||| |
|
|
| T |
1482374 |
tacatgatgtaccaacaaggatgctttgcaggtgggacggtgcttcgtttggccaaggacttggctgagaataataaaggtgctcgtgtgttggttgttt |
1482473 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
|||||||||| || || || ||||||||||| || ||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||| || || |
|
|
| T |
1482474 |
gttctgaagttactgcagtgacattccgtggtcctagtgatactcatttggacagtcttgttggacaagcactctttggagatggagctgctgcactcat |
1482573 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| || |||||||| ||| |
|
|
| T |
1482574 |
tgttggttctgacccaataccagaaattgagaaacctatatttgagatggtttggactgcacaaacaattgctccagacagtgagggggccattgacggt |
1482673 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | || |||||| | |||| |
|
|
| T |
1482674 |
catcttcgtgaagctggtctaacatttcaccttcttaaagatgttcctgggattgtttcaaagaacattgataaagcattgatcgatgctttccaaccat |
1482773 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |
|
|
| T |
1482774 |
taaacatttctgattacaactcaatcttttggattg |
1482809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 18 - 653
Target Start/End: Original strand, 1509105 - 1509739
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||| || |||||||||||||| ||| |||||||||| ||||| || |||| ||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
1509105 |
cattggatgctaggcaagacatggtggttgtaaaggtacctaggctaggaaaagaggttgcagtgaaggctataaaagaatggggccagccaaaatcaaa |
1509204 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
|||||| || |||||| |||||||||||||||| || || ||| ||||||| |||||||||| |||||||| || ||||||| ||||||||| |||||| |
|
|
| T |
1509205 |
gattacacatttaatcttttgcaccacaagtggtgttgatatgtctggagctcattatcaacttaccaaacttttaggtcttcacccatatgtaaaaagg |
1509304 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| || || |||| |||||| || ||||| ||||| || ||| ||| |||||||||||||||||||| |
|
|
| T |
1509305 |
tacatgatgtaccaacaaaggtgttttgcaggtggcactgtgcttcatttggcaaaggatttggctgaaaataaccaagatgctcgtgtgttggttgttt |
1509404 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
||||| |||||| || |||||||| ||||||| |||||||||| |||||||| |||||||| |||||| | |||||||||||||||||||| || || |
|
|
| T |
1509405 |
gttctaaagtcattgcagtcacattttgtggccctggtgatactcatttggacagtcttgttggacaagcattatttggagatggagctgctgcactcat |
1509504 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| ||| |
|
|
| T |
1509505 |
tgttggtactgaccctgtaccagaaattgagaaatctatatttgagatggtttggactgcacaaacaattgctccaaatagtgaaggtgccattgacggt |
1509604 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccat |
617 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||| ||| || ||||||||| |||||| | ||||| || ||||||| || | |||| |
|
|
| T |
1509605 |
caccttcgtgaagttggactaacatttcgtcttcttaaagatgtctctgtgactgtctcaaa-aacattgattaagcactgattgaggcatttcaaccat |
1509703 |
T |
|
| Q |
618 |
tgggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
| || ||||||||||||||||| |||||||||| |
|
|
| T |
1509704 |
taaacatctctgattacaactcaatattttggattg |
1509739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 20 - 653
Target Start/End: Original strand, 1499223 - 1499856
Alignment:
| Q |
20 |
ttggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaaga |
119 |
Q |
| |
|
|||||||| || ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | |
|
|
| T |
1499223 |
ttggatgctaggcaagacatgatggcggtagagatacctagactagggaaggaggctgcagtgaaggctatcgaagaatggggtcaaccgaagtcaaata |
1499322 |
T |
|
| Q |
120 |
ttactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggta |
219 |
Q |
| |
|
|||| || ||||| |||||||| ||||| |||||||||||||| || ||||| ||||| || |||||||| |||||| |||||||||||||||||| |
|
|
| T |
1499323 |
ttacacatttaattttttgcacctatagtggtgtagacatgcctggtgcggattaccaactaacaaaactcttaggtcttaacccatatgtgaaaaggta |
1499422 |
T |
|
| Q |
220 |
catgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgtttgt |
319 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| || |||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
1499423 |
catgatgtaccaactagggtgttatgcaggtggaacagtacttcgtttggcgaaggacttagctgagaataacaaaggtgctcgtgtgttggttgtttgt |
1499522 |
T |
|
| Q |
320 |
tctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgattg |
419 |
Q |
| |
|
|||||| |||| || || |||| |||| || ||| |||||||| | ||| |||||||| |||||| | ||||||||||||||||| || | |||| |
|
|
| T |
1499523 |
tctgaaatcactgcaatctcattttgtggacctagtaatactcacctacacaaacttgttggacaagcaatatttggagatggagctgcggcagtcattg |
1499622 |
T |
|
| Q |
420 |
ttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggtca |
519 |
Q |
| |
|
|||| ||||||| |||||| ||||||||||||||| |||||||| | ||||||||||||||||| |||||| |||||||||||||||| ||| |||||| |
|
|
| T |
1499623 |
ttggctctgacctagtacctgaaattgagaaacctttatttgagttagtttggactgcacaaacaattgcttctgatagtgaaggagctatttgtggtca |
1499722 |
T |
|
| Q |
520 |
ccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccattg |
619 |
Q |
| |
|
|||||||||| ||| ||||||| | | ||| ||| ||||| ||| ||||||||||||||| ||| ||||| | | |||||||| || | ||||| |
|
|
| T |
1499723 |
acttcgtgaagttgggctaacatataatattcgtaaggatgtctctgagattgtctcaaagaatattgataaagtactagttgaggcatttcaaccatta |
1499822 |
T |
|
| Q |
620 |
ggaatttctgattacaactcaatcttttggattg |
653 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||| |
|
|
| T |
1499823 |
ggaatctctgattataactcaatcttttggattg |
1499856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 20 - 654
Target Start/End: Original strand, 1486653 - 1487287
Alignment:
| Q |
20 |
ttggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaaga |
119 |
Q |
| |
|
|||||||| || ||||||||||||||| ||| || ||||| ||||| || |||||||||||||| ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
1486653 |
ttggatgctaggcaagacatggtggtgcgagacgtgcctaggctaggaaatgaggctgcagtgaaagctataaaagaatagggccaaccaaagtcaaaga |
1486752 |
T |
|
| Q |
120 |
ttactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggta |
219 |
Q |
| |
|
|||| |||||||| ||||||||| ||||| ||| ||||||||| |||||||| |||||||| |||||||| |||||| |||| |||||||| |||| |
|
|
| T |
1486753 |
ttacacacttaatattttgcaccatgagtggtataggcatgcctggtgccgattaccaactcacaaaactcttaggtctttgcccggatgtgaaacggta |
1486852 |
T |
|
| Q |
220 |
catgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgtttgt |
319 |
Q |
| |
|
||||| ||||||||||| || |||||||| || || || || |||| |||||| || || ||||||||||| |||| ||||| ||||||||| | ||| |
|
|
| T |
1486853 |
tatgatataccaacaaggatgctttgcagggggcactgttctacgttaggccaaggacttggctgagaacaataaagatgctcttgtgttggtaatatgt |
1486952 |
T |
|
| Q |
320 |
tctgaagtcaccgctgtcac-attccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgatt |
418 |
Q |
| |
|
||||||||||| | |||| ||| ||||||| | ||| ||| || || || ||||||||| |||||| | ||||| |||||||||| || | ||| |
|
|
| T |
1486953 |
tctgaagtcactac-atcactattttgtggccctaatgaaactgacatgagcaaccttgttggacaagcattatttggtgatggagctgttgtagtcatt |
1487051 |
T |
|
| Q |
419 |
gttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggtc |
518 |
Q |
| |
|
||||| || || || || || |||||||||||||| | |||||| | ||||||||||||||||| || |||| |||||||||| ||| ||| || | |
|
|
| T |
1487052 |
gttggctccgatccgatatcaaaaattgagaaacctctctttgagcttgtttggactgcacaaacaatagctctagatagtgaagaagcaattagcggcc |
1487151 |
T |
|
| Q |
519 |
accttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccatt |
618 |
Q |
| |
|
| |||||||||| ||||||||||||| | |||| ||||||||| |||| ||| ||||||||||||| ||||| | | ||| |||| ||| | ||||| |
|
|
| T |
1487152 |
aacttcgtgaagttggactaacatttaatcttcgtaaagatgtccctgaaattatctcaaagaacatcgataaagaactagttaaggcattccaaccatt |
1487251 |
T |
|
| Q |
619 |
gggaatttctgattacaactcaatcttttggattgt |
654 |
Q |
| |
|
|| || ||||||||||| |||| ||||||||||| |
|
|
| T |
1487252 |
aggcatctctgattacaatgcaattttttggattgt |
1487287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 32 - 653
Target Start/End: Complemental strand, 24163917 - 24163296
Alignment:
| Q |
32 |
caagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaa |
131 |
Q |
| |
|
|||||||||||||| ||||||| ||| |||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||||||| || ||||||| |
|
|
| T |
24163917 |
caagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaagaatggggccaaccaaagtcaaagatcacacacttaa |
24163818 |
T |
|
| Q |
132 |
tcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtacca |
231 |
Q |
| |
|
| ||||||| | |||||| ||||| |||||||| |||||||| |||||||| |||||||| ||||||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
24163817 |
tattttgcactataagtggtgtagatatgcctggtgccgattaccaactcacaaaactcttaggtcttcgcccatgtgtaaaaaggtatatgatgtacca |
24163718 |
T |
|
| Q |
232 |
acaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcacc |
331 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||| || || |||||||||||||||||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
24163717 |
acaagggtgttttgcaggtggcacggtacttcgcttggccaaggacttggctgagaacaacaaaggttctcgtgtgttggttgtttgttctgaagttacc |
24163618 |
T |
|
| Q |
332 |
gctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgattgttggttctgacc |
431 |
Q |
| |
|
|| ||||||| |||| || || ||||||||||| |||| ||||||||| ||||| || |||||||||||||||||||| | |||||||| ||||||| |
|
|
| T |
24163617 |
gcaatcacattttgtggaccaagcgatactcacttagacaaccttgttggacaagctctatttggagatggagctgctgcagtcattgttggctctgacc |
24163518 |
T |
|
| Q |
432 |
cagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggtcaccttcgtgaagc |
531 |
Q |
| |
|
|| ||| ||||||||||||||| |||||||| | |||||||| |||||||| || ||||| ||||||||||||| ||| ||| || ||||||||| |
|
|
| T |
24163517 |
caatacaggaaattgagaaacctctatttgagttagtttggacagcacaaacaatcgctccaaatagtgaaggagctatttgtggccaacttcgtgaatt |
24163418 |
T |
|
| Q |
532 |
tggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacattactaaagcattggttgaggctttcgagccattgggaatttctgat |
631 |
Q |
| |
|
||| ||| ||||||| ||| ||| |||||||| | |||||||||||||| ||| |||||||||| ||||||| ||| | ||||| || || |||||| |
|
|
| T |
24163417 |
tgggctatcatttcatctttgtaaggatgttccagacattgtctcaaagaatattgataaagcattgtttgaggcattccaaccattaggtatctctgat |
24163318 |
T |
|
| Q |
632 |
tacaactcaatcttttggattg |
653 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
24163317 |
tacaactcaatcttttggattg |
24163296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 586
Target Start/End: Complemental strand, 37863529 - 37862963
Alignment:
| Q |
20 |
ttggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaaga |
119 |
Q |
| |
|
|||||||||||||| || |||||||| || || ||||| | ||||| || ||||||||| |||||||| || |||||||||||||| |||||||||| |
|
|
| T |
37863529 |
ttggatgcaagacaggatatggtggttgtggaagtaccaaagctaggaaaagaggctgcaacaaaggctatcaaggaatggggtcaacctaagtcaaaga |
37863430 |
T |
|
| Q |
120 |
ttactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggta |
219 |
Q |
| |
|
||||||| |||| |||||||||||||||| || || |||||||| || || ||||| ||||| || ||||||||||||||||| |||||||| | || |
|
|
| T |
37863429 |
ttactcatctaattttttgcaccacaagtggtgtggatatgcctggtgctgactatcagctcacaaagctcttgggtcttcgcccgtatgtgaagcgtta |
37863330 |
T |
|
| Q |
220 |
catgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgtttgt |
319 |
Q |
| |
|
|||||||| |||||||| |||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| |||||| |
|
|
| T |
37863329 |
tatgatgtatcaacaaggttgttttgctggtgggacggtgcttcgtttggctaaagatttggctgaaaacaacaaaggcgctcgtgttttggtggtttgt |
37863230 |
T |
|
| Q |
320 |
tctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgattg |
419 |
Q |
| |
|
|| || |||| || || || |||||||| || ||||||||||| | || || ||||| ||||| ||| ||||||||||||| || || ||| |||||| |
|
|
| T |
37863229 |
tcggagatcactgcagttactttccgtggacctagtgatactcatcttgatagtcttgtggggcaggcattgtttggagatggtgcagcagctgtgattg |
37863130 |
T |
|
| Q |
420 |
ttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggtca |
519 |
Q |
| |
|
||||||| || || | |||||| ||||||| ||| | ||||| ||||||||||||||||||| || | ||| |||||||||||||| ||||||||||| |
|
|
| T |
37863129 |
ttggttcagatccgttgccagaagttgagaagcctttgtttgaattggtttggactgcacaaacaatcgttccagatagtgaaggagctattgatggtca |
37863030 |
T |
|
| Q |
520 |
ccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacatt |
586 |
Q |
| |
|
|||||| ||||| ||||| ||||| || || || || ||||||||||| ||||||||||||||||| |
|
|
| T |
37863029 |
ccttcgagaagcaggactgacattccatctcctcaaggatgttcctggccttgtctcaaagaacatt |
37862963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 586
Target Start/End: Complemental strand, 37859505 - 37858937
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||||||| |||||||| || ||||| ||| ||||| || || |||||||||||||| ||||| || |
|
|
| T |
37859505 |
cattggatgcaagacaagacatggtggttgtggaggtaccaagactaggaaaagaggcagcaacaaaggccatcaaggaatggggtcaacctaagtccaa |
37859406 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
|||||| ||| | ||| |||||||||| ||||| || |||||||| || ||||| ||||| || || || |||||||| ||||| ||||||||||| | |
|
|
| T |
37859405 |
gattacccacctcatcttttgcaccaccagtggcgtggacatgcccggtgccgactatcagctgacaaagctcttgggccttcgtccatatgtgaagcgt |
37859306 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || ||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
37859305 |
tacatgatgtaccaacaaggttgttttgctggtggcacggtgcttcgtttggctaaagacttggctgaaaacaacaaaggtgctcgtgtgttggtagttt |
37859206 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggagctgctgctctgat |
417 |
Q |
| |
|
|||| || | || || || || |||||||| |||||||| ||||| | || |||||||| ||||||||| ||||||||||||| || || ||| |||| |
|
|
| T |
37859205 |
gttcagagataactgcagttactttccgtggacccagtgacactcatcttgatagccttgtggggcaagcattgtttggagatggtgcagcagctgtgat |
37859106 |
T |
|
| Q |
418 |
tgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccattgatggt |
517 |
Q |
| |
|
|| ||||| |||||| ||||| || |||||||||| | ||||| |||| |||||||||||||| || ||| |||||||||||||| ||||| ||| |
|
|
| T |
37859105 |
cgtaggttcagacccattaccacaagttgagaaacccttgtttgaattggtatggactgcacaaacgatccttccagatagtgaaggagcaattgacggt |
37859006 |
T |
|
| Q |
518 |
caccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtctcaaagaacatt |
586 |
Q |
| |
|
||||||||||||| || || ||||| || || || || ||||||||||| || |||||||||||||| |
|
|
| T |
37859005 |
caccttcgtgaagtcgggcttacattccatctcctcaaggatgttcctggtcttatctcaaagaacatt |
37858937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 83 - 507
Target Start/End: Original strand, 39030117 - 39030541
Alignment:
| Q |
83 |
aaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactca |
182 |
Q |
| |
|
|||||||| || |||||||||||||| ||||||| | ||||||| | || ||||||| ||||||| || || ||||||||||| || ||||| |||| |
|
|
| T |
39030117 |
aaggctatcaatgaatggggtcaacctaagtcaatggttactcatctcatattttgcacttcaagtggtgtcgatatgcctggagctgactatcagctca |
39030216 |
T |
|
| Q |
183 |
ccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagc |
282 |
Q |
| |
|
| || ||||| || ||| | |||||||| || | || ||||||||||||||||| |||||||| |||| | || ||||| ||||| |||||||| || |
|
|
| T |
39030217 |
caaagctcttaggcctttgtccatatgtaaagcgttatatgatgtaccaacaaggttgttttgctggtgcgatggctcttcgcttggctaaagatttggc |
39030316 |
T |
|
| Q |
283 |
tgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttggg |
382 |
Q |
| |
|
|||||||||||||||||| ||||||||| | ||| |||| || | | | | | || ||||| || ||||||||| | | || || ||| | || |
|
|
| T |
39030317 |
tgagaacaacaaaggtgcccgtgtgttgatggttagttcagagattagggtatttaattttcgtggacctagtgatactgatcttgatagtcttatggga |
39030416 |
T |
|
| Q |
383 |
caagcactgtttggagatggagctgctgctctgattgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaa |
482 |
Q |
| |
|
| ||| ||||||||||||| || || ||| ||||||||||||| ||||| | |||||| ||||||| ||| | ||||| |||| ||||||||||||| |
|
|
| T |
39030417 |
cgggcattgtttggagatggtgcggcagctgtgattgttggttcagacccgttgccagaagttgagaagcctttgtttgaattggtatggactgcacaaa |
39030516 |
T |
|
| Q |
483 |
ccattgctcctgatagtgaaggagc |
507 |
Q |
| |
|
|||| ||| |||||||||||||| |
|
|
| T |
39030517 |
ccatcattccagatagtgaaggagc |
39030541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 18 - 561
Target Start/End: Original strand, 35250792 - 35251342
Alignment:
| Q |
18 |
cattggatgcaagacaagacatggtggtggtagaggtacctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaa |
117 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||| || || |||| || || || ||| || || || || |||||||||||||||||||| || |
|
|
| T |
35250792 |
cattggatgcaagacaagatatggtggtagtagaggtgccaaggttaggaaaagaagcagcaacaaaagcgatcaaggaatggggtcaaccaaagtccaa |
35250891 |
T |
|
| Q |
118 |
gattactcacttaatcgtttgcaccacaagtggagtagacatgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaagg |
217 |
Q |
| |
|
||| |||||| | || |||||| || ||||| || || |||||||| || |||||||| ||||| ||| | | || ||||| || | |||||| | |
|
|
| T |
35250892 |
gatcactcacctcatattttgcattactagtggtgtggatatgcctggtgctgattatcagctcacaaaattgctaggacttcgtccgtcggtgaaacgt |
35250991 |
T |
|
| Q |
218 |
tacatgatgtaccaacaagggtgttttgcaggtggtacggtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgttt |
317 |
Q |
| |
|
|| ||||||||||||||||||||||| || ||||||| ||| ||||||||||| |||||||| ||||||||||| |||||||||||||| | || |||| |
|
|
| T |
35250992 |
tatatgatgtaccaacaagggtgtttcgctggtggtatggttcttcgtttggctaaagatttggctgagaacaataaaggtgctcgtgttcttgtggttt |
35251091 |
T |
|
| Q |
318 |
gttctgaagtcaccgctgtcacattccgtggccccagtgatactcacttggacagccttgttgggcaagcactgtttggagatggag-------ctgctg |
410 |
Q |
| |
|
|||| || |||| || || || || |||||||| ||||| || || | || || || || || |||||| ||||||||||||| | |||| | |
|
|
| T |
35251092 |
gttcagagatcactgcagtgacttttcgtggccctagtgacacccatcttgatagtctcgtgggacaagcattgtttggagatggcgctgcagcctgcag |
35251191 |
T |
|
| Q |
411 |
ctctgattgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggactgcacaaaccattgctcctgatagtgaaggagccat |
510 |
Q |
| |
|
|| |||| |||||||| || ||| |||| || |||||| |||| | |||||| | | |||||||||||||| || |||||||||| ||||||| || |
|
|
| T |
35251192 |
ctgtgatcgttggttcagatccattacctgaggttgagagacctttgtttgagctagagtggactgcacaaacaatccttcctgatagtcaaggagctat |
35251291 |
T |
|
| Q |
511 |
tgatggtcaccttcgtgaagctggactaacatttcaccttcttaaagatgt |
561 |
Q |
| |
|
|||||||||||||||||| | |||||||||||| || ||||| || ||||| |
|
|
| T |
35251292 |
tgatggtcaccttcgtgaggttggactaacattccatcttctcaaggatgt |
35251342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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