View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9733_low_1 (Length: 926)

Name: NF9733_low_1
Description: NF9733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9733_low_1
NF9733_low_1
[»] chr4 (43 HSPs)
chr4 (30-908)||(50742234-50743121)
chr4 (583-760)||(2996510-2996689)
chr4 (657-772)||(8422867-8422982)
chr4 (588-764)||(1137645-1137823)
chr4 (583-714)||(7693965-7694095)
chr4 (597-716)||(28300267-28300386)
chr4 (591-716)||(50681050-50681176)
chr4 (657-751)||(17884014-17884110)
chr4 (628-765)||(6466045-6466184)
chr4 (610-751)||(20936210-20936353)
chr4 (663-774)||(3891500-3891611)
chr4 (588-685)||(17751106-17751200)
chr4 (589-692)||(21043195-21043298)
chr4 (583-626)||(22471347-22471390)
chr4 (591-692)||(1706629-1706731)
chr4 (582-624)||(4071953-4071995)
chr4 (645-752)||(10192229-10192337)
chr4 (628-698)||(11264302-11264372)
chr4 (583-636)||(3549509-3549562)
chr4 (588-693)||(4798525-4798630)
chr4 (583-781)||(21157684-21157884)
chr4 (716-773)||(51555956-51556013)
chr4 (607-698)||(17822842-17822934)
chr4 (662-693)||(7730630-7730661)
chr4 (662-693)||(11262796-11262827)
chr4 (583-685)||(36577496-36577599)
chr4 (657-692)||(39063675-39063710)
chr4 (657-696)||(51044508-51044547)
chr4 (591-769)||(1965868-1966048)
chr4 (591-681)||(6987703-6987793)
chr4 (591-692)||(24169270-24169372)
chr4 (589-623)||(32278369-32278403)
chr4 (734-772)||(32920505-32920543)
chr4 (716-770)||(47970245-47970299)
chr4 (588-666)||(48719350-48719428)
chr4 (583-716)||(52746793-52746927)
chr4 (550-750)||(679663-679865)
chr4 (596-641)||(1554975-1555020)
chr4 (734-779)||(2980578-2980623)
chr4 (724-773)||(4191663-4191712)
chr4 (628-685)||(19422412-19422469)
chr4 (734-779)||(46796936-46796981)
chr4 (591-624)||(49940128-49940161)
[»] chr3 (56 HSPs)
chr3 (583-767)||(44295462-44295643)
chr3 (597-716)||(21367650-21367770)
chr3 (607-773)||(1816506-1816675)
chr3 (583-817)||(30573868-30574100)
chr3 (548-690)||(45541580-45541724)
chr3 (628-757)||(24785145-24785276)
chr3 (587-698)||(14548679-14548790)
chr3 (583-765)||(20192560-20192744)
chr3 (583-692)||(37273141-37273250)
chr3 (583-761)||(49465619-49465797)
chr3 (596-685)||(50952347-50952436)
chr3 (596-717)||(54837001-54837122)
chr3 (591-698)||(18405792-18405900)
chr3 (628-698)||(3044258-3044328)
chr3 (551-682)||(24281064-24281197)
chr3 (612-692)||(39602193-39602273)
chr3 (591-698)||(39980730-39980838)
chr3 (548-641)||(44014715-44014810)
chr3 (583-623)||(50211811-50211851)
chr3 (576-639)||(20194980-20195043)
chr3 (657-712)||(22203417-22203472)
chr3 (590-689)||(27896131-27896230)
chr3 (579-689)||(2152128-2152238)
chr3 (596-690)||(21574499-21574593)
chr3 (586-692)||(24624217-24624323)
chr3 (596-698)||(40880915-40881017)
chr3 (588-682)||(47513670-47513764)
chr3 (610-667)||(5391911-5391968)
chr3 (628-677)||(25925764-25925813)
chr3 (716-772)||(905059-905115)
chr3 (600-692)||(20467157-20467249)
chr3 (628-692)||(20669179-20669243)
chr3 (652-692)||(24158526-24158566)
chr3 (723-779)||(25964360-25964416)
chr3 (587-752)||(36646340-36646507)
chr3 (628-692)||(40665436-40665500)
chr3 (716-776)||(41028940-41029000)
chr3 (647-690)||(2825156-2825199)
chr3 (734-773)||(16790463-16790502)
chr3 (716-771)||(34958254-34958309)
chr3 (583-634)||(50760656-50760707)
chr3 (662-692)||(24887316-24887346)
chr3 (549-623)||(25182908-25182981)
chr3 (583-641)||(25258830-25258888)
chr3 (598-672)||(33880526-33880599)
chr3 (549-624)||(47903998-47904075)
chr3 (583-621)||(50015964-50016002)
chr3 (598-672)||(53952075-53952149)
chr3 (583-636)||(2413633-2413686)
chr3 (591-692)||(3845524-3845625)
chr3 (538-571)||(16072948-16072981)
chr3 (596-685)||(23808031-23808120)
chr3 (647-692)||(24280718-24280763)
chr3 (663-692)||(44284114-44284143)
chr3 (595-692)||(50600144-50600241)
chr3 (583-693)||(52323848-52323960)
[»] chr8 (51 HSPs)
chr8 (598-767)||(42215275-42215446)
chr8 (582-698)||(39551162-39551278)
chr8 (595-693)||(12851182-12851280)
chr8 (583-692)||(11569411-11569520)
chr8 (628-692)||(20672757-20672821)
chr8 (607-693)||(26473730-26473816)
chr8 (598-692)||(30389106-30389200)
chr8 (596-693)||(7918413-7918510)
chr8 (679-766)||(926418-926508)
chr8 (647-691)||(1433556-1433600)
chr8 (595-698)||(9956779-9956883)
chr8 (548-641)||(16162818-16162913)
chr8 (602-692)||(1930042-1930133)
chr8 (732-817)||(4389826-4389908)
chr8 (607-698)||(5088853-5088944)
chr8 (548-672)||(9700028-9700154)
chr8 (583-690)||(30191095-30191202)
chr8 (613-692)||(35220707-35220786)
chr8 (607-693)||(2458544-2458630)
chr8 (597-674)||(10120781-10120859)
chr8 (716-778)||(14482121-14482183)
chr8 (658-692)||(25097393-25097427)
chr8 (596-650)||(41442420-41442474)
chr8 (548-779)||(28769256-28769491)
chr8 (657-698)||(43709274-43709315)
chr8 (583-692)||(44236777-44236886)
chr8 (583-623)||(2487962-2488002)
chr8 (652-692)||(9836877-9836917)
chr8 (607-758)||(13459585-13459737)
chr8 (583-698)||(24558854-24558967)
chr8 (583-735)||(34849065-34849220)
chr8 (591-674)||(35643949-35644033)
chr8 (600-692)||(40071756-40071848)
chr8 (736-779)||(6918949-6918992)
chr8 (657-692)||(27028838-27028873)
chr8 (645-766)||(34522070-34522195)
chr8 (548-623)||(6526169-6526246)
chr8 (583-758)||(7646145-7646322)
chr8 (583-693)||(10923602-10923712)
chr8 (580-626)||(10939448-10939494)
chr8 (662-757)||(13561345-13561442)
chr8 (583-692)||(26410286-26410396)
chr8 (663-692)||(6509337-6509366)
chr8 (657-690)||(10075579-10075612)
chr8 (628-689)||(11795102-11795163)
chr8 (582-692)||(12361199-12361311)
chr8 (596-641)||(25097433-25097478)
chr8 (657-698)||(34551121-34551162)
chr8 (583-636)||(34770931-34770984)
chr8 (673-743)||(38537545-38537617)
chr8 (580-621)||(41398059-41398100)
[»] chr1 (62 HSPs)
chr1 (583-688)||(31517694-31517799)
chr1 (598-692)||(37811859-37811953)
chr1 (620-758)||(36151496-36151636)
chr1 (548-770)||(17269177-17269403)
chr1 (609-693)||(35925696-35925780)
chr1 (583-759)||(10199362-10199540)
chr1 (584-690)||(4445717-4445823)
chr1 (583-689)||(37593638-37593744)
chr1 (583-691)||(49692006-49692112)
chr1 (716-775)||(870967-871026)
chr1 (647-759)||(35017512-35017628)
chr1 (612-698)||(25479582-25479668)
chr1 (644-774)||(4200152-4200284)
chr1 (583-712)||(7136952-7137081)
chr1 (628-716)||(7472294-7472383)
chr1 (604-693)||(24460382-24460471)
chr1 (583-692)||(33723336-33723445)
chr1 (602-750)||(3924571-3924721)
chr1 (583-690)||(6279408-6279515)
chr1 (550-692)||(172492-172639)
chr1 (644-698)||(7218089-7218143)
chr1 (617-776)||(10854654-10854815)
chr1 (608-698)||(37842334-37842424)
chr1 (608-690)||(43338125-43338207)
chr1 (583-688)||(32515395-32515500)
chr1 (583-624)||(43371845-43371886)
chr1 (618-690)||(5047155-5047227)
chr1 (586-690)||(7262475-7262579)
chr1 (613-693)||(11137851-11137930)
chr1 (612-692)||(11639399-11639479)
chr1 (658-698)||(25005826-25005866)
chr1 (553-698)||(29723490-29723637)
chr1 (657-693)||(38651459-38651495)
chr1 (662-698)||(47598454-47598490)
chr1 (597-692)||(4576812-4576907)
chr1 (611-690)||(4699597-4699676)
chr1 (583-674)||(6292518-6292608)
chr1 (601-692)||(10744308-10744399)
chr1 (657-775)||(19389824-19389943)
chr1 (598-685)||(28689421-28689508)
chr1 (613-716)||(39596580-39596682)
chr1 (583-690)||(44422708-44422815)
chr1 (583-637)||(5421898-5421952)
chr1 (614-680)||(11695880-11695946)
chr1 (583-685)||(19092338-19092439)
chr1 (583-641)||(27807173-27807231)
chr1 (591-641)||(38001654-38001704)
chr1 (652-690)||(45667785-45667823)
chr1 (598-663)||(4481966-4482031)
chr1 (583-692)||(4622100-4622209)
chr1 (550-623)||(5886911-5886982)
chr1 (583-624)||(8382416-8382457)
chr1 (667-716)||(23445317-23445366)
chr1 (645-698)||(26779941-26779994)
chr1 (628-693)||(30257689-30257754)
chr1 (598-752)||(33185927-33186082)
chr1 (660-766)||(33527178-33527286)
chr1 (588-641)||(38170649-38170702)
chr1 (607-692)||(39270403-39270488)
chr1 (583-636)||(42336678-42336731)
chr1 (583-773)||(44031953-44032145)
chr1 (718-775)||(52286600-52286657)
[»] chr2 (63 HSPs)
chr2 (578-760)||(39621890-39622072)
chr2 (583-693)||(12313127-12313237)
chr2 (610-716)||(33941892-33941998)
chr2 (583-752)||(787276-787448)
chr2 (596-689)||(33192212-33192304)
chr2 (583-698)||(35485918-35486033)
chr2 (583-714)||(40158703-40158834)
chr2 (583-693)||(38078364-38078474)
chr2 (607-692)||(35378994-35379079)
chr2 (607-714)||(42419982-42420089)
chr2 (591-716)||(1625883-1626009)
chr2 (599-693)||(15120189-15120283)
chr2 (644-759)||(43259772-43259889)
chr2 (628-692)||(1939331-1939395)
chr2 (583-650)||(5902503-5902570)
chr2 (662-766)||(10143103-10143209)
chr2 (549-678)||(43529776-43529907)
chr2 (583-641)||(1801726-1801784)
chr2 (583-641)||(4350748-4350806)
chr2 (652-698)||(9477953-9477999)
chr2 (628-690)||(34652035-34652097)
chr2 (652-698)||(36863648-36863694)
chr2 (583-774)||(11513824-11514012)
chr2 (598-667)||(13220465-13220534)
chr2 (583-692)||(16867746-16867854)
chr2 (596-689)||(32106766-32106859)
chr2 (602-691)||(33256748-33256837)
chr2 (600-677)||(38809348-38809425)
chr2 (657-698)||(39983343-39983384)
chr2 (644-757)||(4090289-4090404)
chr2 (652-692)||(10884544-10884584)
chr2 (591-698)||(20952356-20952464)
chr2 (657-693)||(24097814-24097850)
chr2 (549-674)||(28677577-28677704)
chr2 (599-768)||(28933753-28933923)
chr2 (607-667)||(31096333-31096393)
chr2 (598-690)||(41817177-41817269)
chr2 (616-688)||(44438826-44438898)
chr2 (591-689)||(750680-750779)
chr2 (598-689)||(1494415-1494506)
chr2 (657-692)||(3049981-3050016)
chr2 (659-690)||(9530758-9530789)
chr2 (614-685)||(25790140-25790211)
chr2 (581-624)||(32837398-32837441)
chr2 (657-716)||(40279180-40279239)
chr2 (540-570)||(4508312-4508342)
chr2 (716-774)||(17952790-17952848)
chr2 (628-698)||(33942151-33942221)
chr2 (644-698)||(40279408-40279462)
chr2 (658-759)||(43299430-43299535)
chr2 (607-688)||(43570425-43570506)
chr2 (613-690)||(680512-680589)
chr2 (583-636)||(1318299-1318352)
chr2 (608-685)||(1647250-1647327)
chr2 (716-773)||(3102617-3102674)
chr2 (607-692)||(9556246-9556331)
chr2 (736-773)||(26484193-26484230)
chr2 (677-767)||(33931618-33931710)
chr2 (607-692)||(35378510-35378595)
chr2 (620-693)||(43173228-43173301)
chr2 (591-752)||(43279488-43279652)
chr2 (716-773)||(43530200-43530257)
chr2 (657-698)||(43985031-43985072)
[»] chr6 (36 HSPs)
chr6 (586-752)||(33887775-33887943)
chr6 (591-716)||(20368142-20368267)
chr6 (608-692)||(31624097-31624181)
chr6 (657-749)||(31776303-31776396)
chr6 (602-774)||(9093528-9093704)
chr6 (657-715)||(31812041-31812099)
chr6 (717-766)||(3171521-3171570)
chr6 (596-693)||(8035115-8035212)
chr6 (587-692)||(31686321-31686426)
chr6 (583-692)||(32171337-32171446)
chr6 (591-692)||(33089513-33089614)
chr6 (657-766)||(4006645-4006756)
chr6 (662-775)||(4248880-4248995)
chr6 (628-692)||(6647394-6647458)
chr6 (645-713)||(7945900-7945967)
chr6 (721-773)||(31668779-31668831)
chr6 (600-693)||(103437-103530)
chr6 (583-692)||(34403862-34403971)
chr6 (598-690)||(2263201-2263293)
chr6 (596-752)||(2735014-2735173)
chr6 (612-692)||(28641732-28641812)
chr6 (581-693)||(32386515-32386627)
chr6 (581-692)||(769146-769256)
chr6 (718-769)||(32861356-32861407)
chr6 (608-666)||(1575928-1575986)
chr6 (626-692)||(4246417-4246483)
chr6 (598-692)||(4324423-4324516)
chr6 (628-690)||(4420652-4420714)
chr6 (591-641)||(9202952-9203002)
chr6 (715-769)||(33259744-33259798)
chr6 (674-779)||(33826780-33826884)
chr6 (716-773)||(3217279-3217336)
chr6 (662-768)||(6654544-6654652)
chr6 (583-632)||(10353715-10353764)
chr6 (587-692)||(33116591-33116696)
chr6 (583-672)||(35070421-35070510)
[»] chr5 (40 HSPs)
chr5 (662-779)||(912681-912801)
chr5 (605-752)||(17368621-17368770)
chr5 (602-779)||(39105381-39105562)
chr5 (583-692)||(17258837-17258946)
chr5 (659-779)||(18543226-18543349)
chr5 (608-758)||(18857377-18857531)
chr5 (589-693)||(37611175-37611279)
chr5 (589-693)||(37787905-37788009)
chr5 (605-692)||(13604825-13604912)
chr5 (584-698)||(2568659-2568773)
chr5 (612-692)||(21768180-21768260)
chr5 (583-698)||(12459955-12460070)
chr5 (723-781)||(11684339-11684397)
chr5 (583-641)||(25720371-25720429)
chr5 (583-688)||(4619718-4619823)
chr5 (634-766)||(4014429-4014563)
chr5 (589-716)||(6587067-6587194)
chr5 (716-779)||(20982224-20982287)
chr5 (591-698)||(37526161-37526268)
chr5 (591-698)||(37588322-37588429)
chr5 (583-637)||(499685-499739)
chr5 (602-692)||(11707062-11707152)
chr5 (645-775)||(31694440-31694572)
chr5 (583-692)||(33533494-33533602)
chr5 (586-690)||(10125675-10125779)
chr5 (591-698)||(29925842-29925950)
chr5 (592-692)||(36638754-36638854)
chr5 (657-729)||(10272459-10272533)
chr5 (723-774)||(10391276-10391327)
chr5 (657-692)||(40731476-40731511)
chr5 (645-779)||(12425488-12425625)
chr5 (628-698)||(14674899-14674969)
chr5 (628-698)||(15308992-15309062)
chr5 (717-779)||(19177397-19177459)
chr5 (662-692)||(38047888-38047918)
chr5 (663-693)||(40205108-40205138)
chr5 (717-774)||(1961915-1961972)
chr5 (600-692)||(28777000-28777093)
chr5 (619-692)||(41957441-41957514)
chr5 (660-766)||(42646846-42646954)
[»] chr7 (41 HSPs)
chr7 (583-765)||(28165023-28165207)
chr7 (612-766)||(12110291-12110447)
chr7 (657-774)||(47941243-47941365)
chr7 (662-775)||(39169449-39169563)
chr7 (590-689)||(27626084-27626183)
chr7 (591-692)||(20526453-20526555)
chr7 (583-693)||(25670540-25670650)
chr7 (657-760)||(46945846-46945951)
chr7 (657-817)||(48131231-48131390)
chr7 (628-692)||(529382-529446)
chr7 (549-693)||(28691754-28691899)
chr7 (651-714)||(39542322-39542385)
chr7 (645-716)||(44821942-44822013)
chr7 (578-712)||(752956-753090)
chr7 (584-685)||(3836638-3836738)
chr7 (645-690)||(25596042-25596087)
chr7 (583-684)||(33894642-33894743)
chr7 (583-668)||(44808189-44808274)
chr7 (589-781)||(5628526-5628720)
chr7 (600-692)||(7244687-7244779)
chr7 (607-698)||(39967921-39968013)
chr7 (657-693)||(48917374-48917410)
chr7 (657-712)||(3968785-3968840)
chr7 (583-674)||(22387850-22387941)
chr7 (657-692)||(27378856-27378891)
chr7 (716-775)||(35536029-35536088)
chr7 (734-773)||(45078217-45078256)
chr7 (663-770)||(3610774-3610883)
chr7 (717-779)||(5373143-5373205)
chr7 (583-637)||(8094368-8094422)
chr7 (555-624)||(13960648-13960718)
chr7 (608-666)||(15740390-15740448)
chr7 (657-752)||(17989051-17989148)
chr7 (724-774)||(22388001-22388051)
chr7 (583-641)||(36537966-36538024)
chr7 (668-758)||(1417203-1417295)
chr7 (597-690)||(22551373-22551466)
chr7 (657-698)||(24363629-24363670)
chr7 (657-690)||(30723067-30723100)
chr7 (716-773)||(45593808-45593865)
chr7 (657-698)||(46104595-46104636)
[»] scaffold0022 (1 HSPs)
scaffold0022 (723-775)||(143157-143209)
[»] scaffold0590 (1 HSPs)
scaffold0590 (716-772)||(1163-1219)
[»] scaffold0508 (1 HSPs)
scaffold0508 (716-776)||(9864-9924)
[»] scaffold0275 (1 HSPs)
scaffold0275 (716-772)||(2756-2812)
[»] scaffold0654 (1 HSPs)
scaffold0654 (716-774)||(6726-6784)
[»] scaffold0014 (1 HSPs)
scaffold0014 (716-774)||(116645-116703)
[»] scaffold0608 (1 HSPs)
scaffold0608 (598-663)||(9606-9671)
[»] scaffold0003 (1 HSPs)
scaffold0003 (612-693)||(306332-306413)


Alignment Details
Target: chr4 (Bit Score: 823; Significance: 0; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 823; E-Value: 0
Query Start/End: Original strand, 30 - 908
Target Start/End: Original strand, 50742234 - 50743121
Alignment:
Q  30 gcaagtgagagcttacgggtgtggaacattatgccaagcagttacattaggaatgtgttct---tcttcttctccttcctgtccatctacttccatgtat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||     
T  50742234 gcaagtgagagcttacgggtgtggaacattatgccaagcagttacattaggaatgtgttcttcttcttcttctccttcctgtccatctacttccatgtac 50742333  T
Q  127 ttctcaaatcctctgatcatggcctccatagctaccttaagagacttcttgttacccttaagccctcgttgtgcagatgatacggcttgttgagacccac 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742334 ttctcaaatcctctgatcatggcctccatagctaccttaagagactttttgttacccttaagccctcgttgtgcagatgatacggcttgttgagacccac 50742433  T
Q  227 catcagcagtggcagagcccatcaaagcatctactttctgctcagcaccggcaacactctcttgttcagcaaactgaatccaagcatcatcaagcctgtc 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742434 catcagcagtggcagagcccatcaaagcatctactttctgctcagcaccggcaacactctcttgttcagcaaactgaatccaagcatcatcaagcctgtc 50742533  T
Q  327 ttcaacatgtgccggtgctgtcgctagaccaaagaaaaacccattttcttcttctgcaaaagtaaataaataagccatgtttatattggctcatttgaac 426  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742534 ttcaacatgcgccggtgctgtcgctagaccaaagaaaaacccattttcttcttctgcaaaagtaaataaataagccatgtttatattggctcatttgaac 50742633  T
Q  427 ttacatactcacataagcattagtgaaattgtgtaggagaacttatgaaaacaatgtatggacatgttttcagctcatttccatgagctctggaagattg 526  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742634 ttacatactcacataagcatttgtgaaattgtgtaggagaacttatgacaacaatgtatggacatgttttcagctcatttccatgagctctggaagattg 50742733  T
Q  527 ttaatatataaacacttacgacctgtttggattgacttatttgaggctattcttgtataagcacttgttagactgtttgagagaacttatgaaaacagtt 626  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742734 ttaatatataaacacttacgacctgtttggattgacttatttgaggctattcttgtataagcacttgttagactgtttgagagaacttatgaaaacagtt 50742833  T
Q  627 catgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaatgacttaattt 726  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742834 catgacatgttcataccctgttttcaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaatgacttaattt 50742933  T
Q  727 tatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttcttatgatgtaagttgcaaattaagttatttatcca------aagat 820  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||    
T  50742934 tatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttcttatgatgtaagttgcaaattaagttatttatccaaagatgaagat 50743033  T
Q  821 gacattatatgataagcgtttatgctaatgaacacttaatttagttgtgtaactaaagagagccttaatctattttattgaccttatc 908  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50743034 gacattatatgataagcgtttatgctaatgaacacttaatttagttgtgtaaataaagagagccttaatctattttattgaccttatc 50743121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 583 - 760
Target Start/End: Complemental strand, 2996689 - 2996510
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||| | ||||||||||||||| ||||||||||||  | ||||||||| ||||  || |||| |||| ||||||||| |||||||| |||||||    
T  2996689 ataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagct 2996590  T
Q  683 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagc 760  Q
    ||||||||||| ||||   ||||| ||||||||  |||||  ||||||| || ||||||  || |||||||| |||||||    
T  2996589 tatgaaaacaacttataacttatataaaaacaatttgactgtattttatcttatgttatcgaagtagcttattcataagc 2996510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 772
Target Start/End: Original strand, 8422867 - 8422982
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaatgacttaattttatgttgtgttataaaaatagcttatccat 756  Q
    |||| ||||| ||||||| ||||| || ||||||||| ||||   |||||  ||||||||||||| ||||||| || | ||||||||||||||||| |||    
T  8422867 atttgcataaactctccaagatagattgtgaaaacaacttatagcttatatgaaaacaatgactttattttatctttttttataaaaatagcttatacat 8422966  T
Q  757 aagcgcttatatgata 772  Q
    |||| | |||||||||    
T  8422967 aagcacatatatgata 8422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 588 - 764
Target Start/End: Complemental strand, 1137823 - 1137645
Alignment:
Q  588 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatga 687  Q
    ||||||| | |||||||  |||||||||||||||||  | ||||||||||||||   |||||| |  | |||| |||||||||||  |||||| ||||||    
T  1137823 cacttgtgacactgtttaggagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatga 1137724  T
Q  688 aaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataagcgctt 764  Q
    || ||  ||||  ||||| |||||| |  ||||||| ||||||| | || ||||| |||||| |||| |||||||||||    
T  1137723 aagcagcttatagattattcaaaaataatatgactttattttatatggtattatagaaatagtttattcataagcgctt 1137645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 583 - 714
Target Start/End: Original strand, 7693965 - 7694095
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||| | ||| |||||| || |||||||||||  |||| ||||||||||||||   |||||| | || |||| ||||| |||||||||||| ||    
T  7693965 ataagcacttctaagattgtttgtgaaaacttatgaaat-agttaatgacatgttcataagttgttttcagcttatttccataaactctccaggataact 7694063  T
Q  683 tatgaaaacaagttatttattatacaaaaaca 714  Q
    ||||||||||  ||||   |||||||||||||    
T  7694064 tatgaaaacagcttatagcttatacaaaaaca 7694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 597 - 716
Target Start/End: Original strand, 28300267 - 28300386
Alignment:
Q  597 gactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagtt 696  Q
    ||||| ||||||||| ||||||||||||   ||||||||||| ||   |||||| |||| ||||||||||||||| || |||||| |||||||| |  ||    
T  28300267 gactgattgagagaatttatgaaaacagcctatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagttt 28300366  T
Q  697 atttattatacaaaaacaat 716  Q
    ||   |||||||||||||||    
T  28300367 atagcttatacaaaaacaat 28300386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 591 - 716
Target Start/End: Original strand, 50681050 - 50681176
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgac-atgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||| ||||||||||||||||||||||||||||||| ||||| || ||||||  || |||| || | ||||||||||  ||||||  |||||||||  ||    
T  50681050 ttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagcttatataa 50681149  T
Q  690 acaagttatttattatacaaaaacaat 716  Q
    |||| ||||    ||||||||||||||    
T  50681150 acaacttatagcatatacaaaaacaat 50681176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 657 - 751
Target Start/End: Complemental strand, 17884110 - 17884014
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagctta 751  Q
    ||||||||||||||||||  ||||||||||||||||| | ||   ||||||||||||||  | |||| ||||||| || ||||||| ||||||||||    
T  17884110 attttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttttgttatagaaatagctta 17884014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 765
Target Start/End: Original strand, 6466045 - 6466184
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaatt 725  Q
    |||| |||||||||  || |||| |||| |||| ||||| ||||| || |||||||||| |||||| ||||  |||||||||||| ||  | |||| |||    
T  6466045 atgagatgttcataagctattttcaacttatttccataatctctctagaatagcttatggaaacaacttatagattatacaaaaagaatttcactttatt 6466144  T
Q  726 ttatgttgtgttataaaaatagcttatccataagcgctta 765  Q
    | || |||||||||| ||| | ||||| ||||||||||||    
T  6466145 tgatcttgtgttatataaacaacttattcataagcgctta 6466184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 751
Target Start/End: Original strand, 20936210 - 20936353
Alignment:
Q  610 aacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaa 709  Q
    ||||||||||||||  | |||| |||||||||  ||||||| | || |||| ||||| |||||||||||||  |||||||||||  |||  |||||| ||    
T  20936210 aacttatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataatctctccaggatagaatatgaaaacaacctatagattatataa 20936309  T
Q  710 aaacaa--tgacttaattttatgttgtgttataaaaatagctta 751  Q
    ||||||  |||||| ||||||  ||| |||||| | ||||||||    
T  20936310 aaacaatttgacttcattttaccttgcgttatagatatagctta 20936353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 663 - 774
Target Start/End: Complemental strand, 3891611 - 3891500
Alignment:
Q  663 ataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataagc 760  Q
    |||||||||| |||||||||||| ||||||| |||  ||||||||||||||  |  ||||| ||||||  |  ||||||| |||||| |||| |||||||    
T  3891611 ataagctctctaggatagcttataaaaacaacttacatattatacaaaaacggttcgactttatttta--tcctgttatagaaatagtttattcataagc 3891514  T
Q  761 gcttatatgataag 774  Q
     |||||||||||||    
T  3891513 acttatatgataag 3891500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 588 - 685
Target Start/End: Original strand, 17751106 - 17751200
Alignment:
Q  588 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    ||||||| ||||||||||  ||||||  ||||||||| | | ||||||||||||   |||||||| || ||||||||||||||| || ||||||||||    
T  17751106 cacttgtgagactgtttggaagaactcttgaaaacagcttacgacatgttcata---tgttttaagcttattttcataagctctgcaagatagcttat 17751200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 692
Target Start/End: Original strand, 21043195 - 21043298
Alignment:
Q  589 acttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 688  Q
    |||||| |||||||||| ||||  ||||| |||||| | |||||| |||||||  ||||||| |    ||||||||| ||||| ||||||||||||||||    
T  21043195 acttgtgagactgtttgggagaggttatggaaacagcttatgacacgttcataagctgttttcagtgtattttcatatgctcttcaggatagcttatgaa 21043294  T
Q  689 aaca 692  Q
    ||||    
T  21043295 aaca 21043298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 583 - 626
Target Start/End: Complemental strand, 22471390 - 22471347
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagtt 626  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  22471390 ataagcacttgtgagactgtttgggagaacttatgaaaacagtt 22471347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 591 - 692
Target Start/End: Complemental strand, 1706731 - 1706629
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||| |||| ||||||||||| |||||||||||| | ||| ||| |||||||  || |||  |||| ||||||||||||| |||| ||||| ||||||||    
T  1706731 ttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataagctatttccaacttattttcataagctgtccaagatagtttatgaaa 1706632  T
Q  690 aca 692  Q
    |||    
T  1706631 aca 1706629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 582 - 624
Target Start/End: Complemental strand, 4071995 - 4071953
Alignment:
Q  582 tataagcacttgttagactgtttgagagaacttatgaaaacag 624  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  4071995 tataagcacttgtgagactgtttgagagagcttatgaaaacag 4071953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 752
Target Start/End: Complemental strand, 10192337 - 10192229
Alignment:
Q  645 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaa 742  Q
    |||||| |||| ||||||||| ||||||||||||||||| ||||||||| ||||   |||||  |||||||  |||||| ||| ||| || |||||||||    
T  10192337 tgttttcaacttattttcata-gctctccaggatagcttttgaaaacaacttataacttatatgaaaacaatttgactttattctatcttttgttataaa 10192239  T
Q  743 aatagcttat 752  Q
    ||||| ||||    
T  10192238 aatagtttat 10192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 698
Target Start/End: Complemental strand, 11264372 - 11264302
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    ||||||||| ||||  ||||||| |||| |||| ||||||||||| ||||| |||||||||||||| ||||    
T  11264372 atgacatgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaaacaacttat 11264302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 636
Target Start/End: Original strand, 3549509 - 3549562
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 636  Q
    |||||||||| | |||||||||||||||||||||||||| |||  |||||||||    
T  3549509 ataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgt 3549562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 693
Target Start/End: Original strand, 4798525 - 4798630
Alignment:
Q  588 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatga 687  Q
    ||||||| |||||||| |  ||| |||||| |||| | |  |||||||| ||||  ||||||| | || |||| ||||||||||||| ||||||||||||    
T  4798525 cacttgtgagactgttaggaagagcttatggaaacggcttctgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatga 4798624  T
Q  688 aaacaa 693  Q
    ||||||    
T  4798625 aaacaa 4798630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 781
Target Start/End: Complemental strand, 21157884 - 21157684
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| ||||||||||  ||| ||||   |||||| | ||||||| | || |  ||||||| | || |||| |||||||||| |||||||||     
T  21157884 ataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacatttacaaaagctgtttttagcttatttccataagctcttcaggatagca 21157785  T
Q  683 tatgaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttc 780  Q
    ||||||||||  ||||   ||| |  ||||||   |||||| | |||||  | |||||| ||||||||| || ||||||| |||||||||||| ||||||    
T  21157784 tatgaaaacatcttatagcttacatgaaaacagtttgactttagtttatactttgttatcaaaatagctgatacataagcacttatatgataaacacttc 21157685  T
Q  781 t 781  Q
    |    
T  21157684 t 21157684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 716 - 773
Target Start/End: Original strand, 51555956 - 51556013
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    |||||| ||||||| || |||||||| |||||||||| ||||||| ||||||||||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttatatgataa 51556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 607 - 698
Target Start/End: Original strand, 17822842 - 17822934
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgtt-cataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||||| ||||||||||| | ||||||| || ||||  || |||| | || ||||||||||| |||||| |||||||||||||||||| ||||    
T  17822842 gagaacatatgaaaacagcttatgacatttttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttat 17822934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 693
Target Start/End: Complemental strand, 7730661 - 7730630
Alignment:
Q  662 cataagctctccaggatagcttatgaaaacaa 693  Q
    ||||||||||||||||||||||||||||||||    
T  7730661 cataagctctccaggatagcttatgaaaacaa 7730630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 693
Target Start/End: Original strand, 11262796 - 11262827
Alignment:
Q  662 cataagctctccaggatagcttatgaaaacaa 693  Q
    ||||||||||||||||||||||||||||||||    
T  11262796 cataagctctccaggatagcttatgaaaacaa 11262827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 685
Target Start/End: Original strand, 36577496 - 36577599
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctg-ttttaaactcattttcataagctctccaggatagc 681  Q
    |||||||||||| |||||||||  |||||||||  ||||||  | |||||||||||| |  ||| |||| || ||||||||||||| |||||  ||||||    
T  36577496 ataagcacttgtgagactgtttcggagaacttacaaaaacaacttatgacatgttcaaatgctgtttttcaattcattttcataagttctcccagatagc 36577595  T
Q  682 ttat 685  Q
    ||||    
T  36577596 ttat 36577599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 692
Target Start/End: Original strand, 39063675 - 39063710
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||||||||||||||||| ||||||    
T  39063675 attttcataagctctccaggatagcttataaaaaca 39063710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 696
Target Start/End: Original strand, 51044508 - 51044547
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagtt 696  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  51044508 attttcataagttctctaggatagcttatgaaaacaagtt 51044547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 591 - 769
Target Start/End: Complemental strand, 1966048 - 1965868
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||| ||||||||| || || ||||||||||||  | ||||||||||||||  ||||||| |||| |||| || ||| | || |||||||||||| ||||    
T  1966048 ttgtgagactgttttag-gagcttatgaaaacaacttatgacatgttcataagctgtttttaacttatttccagaagatttctaggatagcttataaaaa 1965950  T
Q  691 caagttatttattatacaaaaacaa--tga-cttaattttatgttgtgttataaaaatagcttatccataagcgcttatatg 769  Q
     || ||||  |||||||| | ||||  |||  ||| |||| | ||||| |||| |||||| |||| ||||||| ||||||||    
T  1965949 taacttataaattatacacagacaatttgagtttatttttctcttgtgctatagaaatagtttattcataagcacttatatg 1965868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 591 - 681
Target Start/End: Original strand, 6987703 - 6987793
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagc 681  Q
    |||| |||||||||| |||| |||||| | |||  | ||||||||| ||||  || |||| |||| |||| ||||||||||||||||||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccaggatagc 6987793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 591 - 692
Target Start/End: Complemental strand, 24169372 - 24169270
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgtt-cataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||| ||||| ||||||||||||| | |||| || | ||||||| || ||||   | |||| |||| |||||||||||||||||| |||||||| |||||    
T  24169372 ttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattttttcaacttattttcataagctctccaagatagcttgtgaaa 24169273  T
Q  690 aca 692  Q
    |||    
T  24169272 aca 24169270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 589 - 623
Target Start/End: Original strand, 32278369 - 32278403
Alignment:
Q  589 acttgttagactgtttgagagaacttatgaaaaca 623  Q
    ||||||||||||||||||||| |||||||||||||    
T  32278369 acttgttagactgtttgagagtacttatgaaaaca 32278403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 734 - 772
Target Start/End: Original strand, 32920505 - 32920543
Alignment:
Q  734 tgttataaaaatagcttatccataagcgcttatatgata 772  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  32920505 tgttataaaaatagcttatccataaacacttatatgata 32920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 770
Target Start/End: Complemental strand, 47970299 - 47970245
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatga 770  Q
    |||||| ||||||| || ||||||| ||||||||||| ||||||| |||||||||    
T  47970299 tgacttcattttatcttttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 588 - 666
Target Start/End: Original strand, 48719350 - 48719428
Alignment:
Q  588 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataa 666  Q
    ||||||| ||| |||||||| |||||||||||||  ||| ||||||||||| ||  ||||||| | || ||||||||||    
T  48719350 cacttgtgagattgtttgagggaacttatgaaaatggtttatgacatgttcgtaagctgttttcagcttattttcataa 48719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 716
Target Start/End: Original strand, 52746793 - 52746927
Alignment:
Q  583 ataagcacttgttagactgtttgagagaact-tatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagc 681  Q
    |||||||||||| |||||  |||| | |||| |||| |||||| | | ||||||||||||  ||||||| | || ||||||||||||  | || ||||||    
T  52746793 ataagcacttgtgagactagttgataaaactatatggaaacagcttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagc 52746892  T
Q  682 ttatgaaaacaagttatttattatacaaaaacaat 716  Q
    |||||||||||  ||||   ||| |||||||||||    
T  52746893 ttatgaaaacagcttatggcttacacaaaaacaat 52746927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 750
Target Start/End: Complemental strand, 679865 - 679663
Alignment:
Q  550 tgtttggattgacttatttgaggctattcttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttt 649  Q
    |||||||||||||| |||||||  ||| || |||||||||||||  |||||  |||  |||| |||||||||||  | |||| |||||||||  ||||||    
T  679865 tgtttggattgactaatttgagcttat-ctggtataagcacttgg-agactacttggtagaagttatgaaaacatcttatgatatgttcataaactgttt 679768  T
Q  650 taaactcattttcataagctc-tccaggatagcttatgaaaacaagttatttattatac-aaaaacaa--tgacttaattttatgttgtgttataaaaat 745  Q
    | | |  |||||||||||||| | || |||| |||||||  |||| |||| | |||||| ||||||||  | |||||||||||| || | ||||| ||||    
T  679767 tcagcatattttcataagctcttacaagatatcttatgactacaacttatatcttatacaaaaaacaatttaacttaattttatattttattatagaaat 679668  T
Q  746 agctt 750  Q
    |||||    
T  679667 agctt 679663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 641
Target Start/End: Original strand, 1554975 - 1555020
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    |||||||||||||||| ||||||||| || | ||||||||||||||    
T  1554975 agactgtttgagagaatttatgaaaatagcttatgacatgttcata 1555020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 779
Target Start/End: Original strand, 2980578 - 2980623
Alignment:
Q  734 tgttataaaaatagcttatccataagcgcttatatgataagcactt 779  Q
    ||||||| ||||||||||| ||||||| |||||||||||| |||||    
T  2980578 tgttatagaaatagcttatacataagcacttatatgataaacactt 2980623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 773
Target Start/End: Complemental strand, 4191712 - 4191663
Alignment:
Q  724 ttttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    |||||| || ||||||| ||||||||||| ||||||| ||||||||||||    
T  4191712 ttttatcttttgttatagaaatagcttatacataagcacttatatgataa 4191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 685
Target Start/End: Complemental strand, 19422469 - 19422412
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    ||||||||| ||||| || |||| |||| |||| ||||||||||||||||||| ||||    
T  19422469 atgacatgtgcatacgcttttttcaacttatttccataagctctccaggatagtttat 19422412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 734 - 779
Target Start/End: Complemental strand, 46796981 - 46796936
Alignment:
Q  734 tgttataaaaatagcttatccataagcgcttatatgataagcactt 779  Q
    |||||| |||||||||||| ||||||  ||||||||||||||||||    
T  46796981 tgttatgaaaatagcttatgcataagaacttatatgataagcactt 46796936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 624
Target Start/End: Original strand, 49940128 - 49940161
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacag 624  Q
    |||| |||||||||||||||||||||||||||||    
T  49940128 ttgtgagactgtttgagagaacttatgaaaacag 49940161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 6e-24; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 583 - 767
Target Start/End: Complemental strand, 44295643 - 44295462
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| | ||| |||||||||||||||||||||  |||||||||  || |||  ||||||| | || |||| ||||||||||||   ||| ||    
T  44295643 ataagcacttgtgatactatttgagagaacttatgaaaactattcatgaca--tttatattctgttttcagcttatttccataagctctccgatatatct 44295546  T
Q  683 tatgaaaacaagttatttattatacaaaaacaatgacttaattttatgttgtgttataaaaatagcttatccataagcgcttata 767  Q
    ||||||||||| ||||  |||||| ||||| ||||| || ||||||| ||| |||||| ||||||||||| || |||||||||||    
T  44295545 tatgaaaacaacttatagattata-aaaaaaaatgattttattttatcttgagttatagaaatagcttattcacaagcgcttata 44295462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 597 - 716
Target Start/End: Complemental strand, 21367770 - 21367650
Alignment:
Q  597 gactgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagt 695  Q
    ||||||||| |||||||||||||||||| | ||||||| ||||| |  ||||||| | || ||||||||||| |||||| |||||||||||||||||| |    
T  21367770 gactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaact 21367671  T
Q  696 tatttattatacaaaaacaat 716  Q
    |||  ||||||| ||||||||    
T  21367670 tatacattatacgaaaacaat 21367650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 607 - 773
Target Start/End: Complemental strand, 1816675 - 1816506
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattata 706  Q
    |||||| |||||||| |  | ||||||| ||||||  ||||||| | || ||||| ||||||||||||| ||||||||||||||||| |||| | |||||    
T  1816675 gagaacatatgaaaataacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttata 1816576  T
Q  707 caaaaaca--atgacttaattttatgttgtgttat-aaaaatagcttatccataagcgcttatatgataa 773  Q
    ||||||||   |||||| ||||||| || | |||| |||||||| |||| ||| ||| ||||||||||||    
T  1816575 caaaaacagtttgactttattttatcttttattataaaaaatagtttatacattagctcttatatgataa 1816506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 583 - 817
Target Start/End: Original strand, 30573868 - 30574100
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| ||  |||||| |||||||||||||||||  | ||| ||||||||||  ||||||| | || || ||||| ||||||||| |||||||    
T  30573868 ataagcacttgtgagtttgtttgtgagaacttatgaaaacaaattatggcatgttcataagctgttttcagcttatgttcatcagctctccaagatagct 30573967  T
Q  683 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttat-atgataagcactt 779  Q
    ||||||||||   |||  |||||| ||||| ||  | |||| ||||||| |  | ||||| ||||||||||| ||||||||||||| ||||||   | |     
T  30573968 tatgaaaacatcatatagattataaaaaaaaaacttaactttattttatct--ttttatagaaatagcttatacataagcgcttatcatgata---aatg 30574062  T
Q  780 cttatgatgtaagttgcaaattaagttatttatccaaa 817  Q
    |||||||| |||| ||||||||| | | ||||||||||    
T  30574063 cttatgatataagctgcaaattatggtgtttatccaaa 30574100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 548 - 690
Target Start/End: Complemental strand, 45541724 - 45541580
Alignment:
Q  548 cctgtttggattgacttatttgaggctattc--ttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccct 645  Q
    ||||||||||||||||||||||||  ||||   | |||||| ||||||| |||||||||   ||||||||||||||||| | ||||||||||||||  ||    
T  45541724 cctgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcataagct 45541625  T
Q  646 gttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    ||||| |  | ||| ||||||| | |||| |||||||||||||||    
T  45541624 gttttcaggttattctcataagttatccaagatagcttatgaaaa 45541580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 628 - 757
Target Start/End: Complemental strand, 24785276 - 24785145
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaac--aatgacttaatt 725  Q
    ||||||||||||||   |||||| | || |||| ||||||||||| ||||||||||||||||||| |||||  |||||||||||||  | |||||| |||    
T  24785276 atgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgactttatt 24785177  T
Q  726 ttatgttgtgttataaaaatagcttatccata 757  Q
    |||| ||||| | || |||||| |||| ||||    
T  24785176 ttatcttgtgatttagaaataggttattcata 24785145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 587 - 698
Target Start/End: Original strand, 14548679 - 14548790
Alignment:
Q  587 gcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatg 686  Q
    |||||||| ||||||||||||||| ||||||||||||    ||||||| || |||  ||||||| | || |||| |||||||||||||| ||| ||||||    
T  14548679 gcacttgtgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatg 14548778  T
Q  687 aaaacaagttat 698  Q
    ||||||| ||||    
T  14548779 aaaacaacttat 14548790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 583 - 765
Target Start/End: Original strand, 20192560 - 20192744
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||| ||| ||||| ||||||| |||||  |||||| | ||||||||| ||||  ||||||| ||||||||| |||||||||||| | |||  |    
T  20192560 ataagcacttcttacactgtatgagagagcttatagaaacagcttatgacatgtccataagctgttttcaactcatttccataagctctcccgaataagt 20192659  T
Q  683 tatgaaaacaagttatttattatacaaaaac--aatgacttaattttatgttgtgttataaaaatagcttatccataagcgctta 765  Q
    ||  ||||||  ||||  ||||||  |||||    |||||| ||||||| || ||||||| ||||||||||| ||||||| ||||    
T  20192660 tacaaaaacagcttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 583 - 692
Target Start/End: Complemental strand, 37273250 - 37273141
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||||||| || |||||||||| |||| |||||| |||||  | ||||||||| ||||   |||||| |||| |||| |||||| |||||| |||||||    
T  37273250 ataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagct 37273151  T
Q  683 tatgaaaaca 692  Q
    ||||||||||    
T  37273150 tatgaaaaca 37273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 583 - 761
Target Start/End: Original strand, 49465619 - 49465797
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| | | |||||  |||||||||||||||||| | || ||||||||||    | |||||| || |||| |||||| ||||||| ||||||    
T  49465619 ataagcacttgtgatattgtttcggagaacttatgaaaacagcttattacatgttcattaggttttttaagcttatttccataagttctccagtatagct 49465718  T
Q  683 tatgaaaacaagttattta-ttatac-aaaaacaatgacttaattttatgttgtgttataaaaatagcttatccataagcg 761  Q
    |||||||||||   |||||  ||||| ||||| | | |||| ||||||| || ||||||||||||||||||  ||||||||    
T  49465719 tatgaaaacaa--catttagctatacgaaaaaaattaactttattttatcttttgttataaaaatagcttacacataagcg 49465797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 596 - 685
Target Start/End: Complemental strand, 50952436 - 50952347
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    |||||||| |||||||| || |||||||| | ||||||||||||||  ||||||||| || |||| ||||||||||||| ||||| ||||    
T  50952436 agactgttcgagagaacgtacgaaaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttat 50952347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 596 - 717
Target Start/End: Original strand, 54837001 - 54837122
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagt 695  Q
    ||||||||||  |||| |||||||||||| | |||||||||||||| | ||||||   || ||||| ||||||| |||| ||||||||||||||| || |    
T  54837001 agactgtttggaagaatttatgaaaacagcttatgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataact 54837100  T
Q  696 tatttattatacaaaaacaatg 717  Q
    ||    ||||||||||||||||    
T  54837101 tacagtttatacaaaaacaatg 54837122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 591 - 698
Target Start/End: Original strand, 18405792 - 18405900
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||| ||||||||||  ||||||||||||||||||||| |||| | ||||||  || ||| || || | ||||||||| |||||| ||||||||||||||    
T  18405792 ttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttcaagcttaatttcataagttctccaagatagcttatgaaa 18405891  T
Q  690 acaagttat 698  Q
    |||| ||||    
T  18405892 acaacttat 18405900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 698
Target Start/End: Original strand, 3044258 - 3044328
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    ||||||||||||||  ||||||| |||| |||||||||||||||||||| |||| || ||||||| |||||    
T  3044258 atgacatgttcataagctgttttcaacttattttcataagctctccaggttagcataagaaaacaggttat 3044328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 682
Target Start/End: Complemental strand, 24281197 - 24281064
Alignment:
Q  551 gtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgtt 648  Q
    |||| |||||||||||||||| ||||   || ||||||||||||||  || ||||||||||| ||||||||||||  | |||| || | ||||   ||||    
T  24281197 gtttagattgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataagttgtt 24281098  T
Q  649 ttaaactcattttcataagctctccaggatagct 682  Q
    || |||| | |||||||||||||||| |||||||    
T  24281097 ttcaacttactttcataagctctccatgatagct 24281064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 692
Target Start/End: Original strand, 39602193 - 39602273
Alignment:
Q  612 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||| |||| | ||||||||||||||   |||||| |||| ||||||||||| |||| | |||||||||||||||||    
T  39602193 cttatgaagacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaaca 39602273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 591 - 698
Target Start/End: Complemental strand, 39980838 - 39980730
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatg-ttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||| ||||||||| ||||||||||||||||||| | |||||  | ||||||  || |||| |||| ||||||||||| ||||||  ||||||||| |||    
T  39980838 ttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagcttttttcaacttattttcataagttctccaatatagcttataaaa 39980739  T
Q  690 acaagttat 698  Q
    |||| ||||    
T  39980738 acaacttat 39980730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 641
Target Start/End: Original strand, 44014715 - 44014810
Alignment:
Q  548 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    ||||||||||||| ||||||||||  |||   || | |||| ||||||| ||||||||||||| ||||||||||||||| | ||||| ||||||||    
T  44014715 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcata 44014810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 583 - 623
Target Start/End: Complemental strand, 50211851 - 50211811
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaaca 623  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  50211851 ataagcacttgtaagactgtttgagagaacttatgaaaaca 50211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 576 - 639
Target Start/End: Original strand, 20194980 - 20195043
Alignment:
Q  576 ttcttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttca 639  Q
    |||||| ||||||| |||| |||||||||| |||| ||||||||||||||| ||||||| ||||    
T  20194980 ttcttgcataagcagttgtgagactgtttgtgagagcttatgaaaacagtttatgacatattca 20195043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 657 - 712
Target Start/End: Complemental strand, 22203472 - 22203417
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaa 712  Q
    ||||||||||| |||||| |||||||||||||||||| ||||  ||||||||||||    
T  22203472 attttcataagttctccaagatagcttatgaaaacaacttatagattatacaaaaa 22203417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 590 - 689
Target Start/End: Original strand, 27896131 - 27896230
Alignment:
Q  590 cttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||||||||||||||  ||||| |||||||||||| |||||||| |||||||   |||  | | || ||||||| || ||||||| ||||||||||||||    
T  27896131 cttgttagactgtttaggagaatttatgaaaacagctcatgacaagttcataaattgtcgtcagcttattttcaaaaactctccaagatagcttatgaaa 27896230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 689
Target Start/End: Original strand, 2152128 - 2152238
Alignment:
Q  579 ttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggat 678  Q
    |||||||||||||||| |||||  |||||| |  |||||||||||  | ||||||||||| ||  ||||||| ||||  |||  |||||||||| |||||    
T  2152128 ttgtataagcacttgtgagactaattgagatattttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggat 2152227  T
Q  679 agcttatgaaa 689  Q
    || ||||||||    
T  2152228 agtttatgaaa 2152238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 690
Target Start/End: Complemental strand, 21574593 - 21574499
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||||||||| |||| ||||||||||||  | ||||||||||||||  ||| ||| | || |||| ||||||||||||| | |||||||| ||||    
T  21574593 agactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaa 21574499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 586 - 692
Target Start/End: Complemental strand, 24624323 - 24624217
Alignment:
Q  586 agcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    ||||||||| ||||||||||  ||| ||||||||||||| | ||||||||| ||||  ||||||| | || |||  |||||| | || |||||||| |||    
T  24624323 agcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttcagcttattaacataagatttctaggatagcctat 24624224  T
Q  686 gaaaaca 692  Q
    |||||||    
T  24624223 gaaaaca 24624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 698
Target Start/End: Original strand, 40880915 - 40881017
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagt 695  Q
    ||||||||||||||| ||||||||||||  | ||||||||  | ||   ||||||||||| ||||| ||||  |||| ||||||| |||||||||||| |    
T  40880915 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 40881014  T
Q  696 tat 698  Q
    |||    
T  40881015 tat 40881017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 588 - 682
Target Start/End: Complemental strand, 47513764 - 47513670
Alignment:
Q  588 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||||| |||||||| | ||| |||||||||||||  | |||||| |||||||   |||||| || | |||||||||||||||||| |||||||    
T  47513764 cacttgtgagactgttcgggaggacttatgaaaacaagttatgacacgttcataagttgttttcaatttattttcataagctctccaagatagct 47513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 610 - 667
Target Start/End: Complemental strand, 5391968 - 5391911
Alignment:
Q  610 aacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataag 667  Q
    ||||||||||||||| | ||||||||||||||  ||||||| |||| |||||||||||    
T  5391968 aacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataag 5391911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 677
Target Start/End: Complemental strand, 25925813 - 25925764
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccagga 677  Q
    ||||||||||||||  ||||||| |||| |||||||||||||||||||||    
T  25925813 atgacatgttcataagctgttttcaacttattttcataagctctccagga 25925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 716 - 772
Target Start/End: Original strand, 905059 - 905115
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgata 772  Q
    |||||| ||||||| || ||||||| ||||||||||| | |||||||||||||||||    
T  905059 tgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgata 905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 600 - 692
Target Start/End: Original strand, 20467157 - 20467249
Alignment:
Q  600 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||| || ||| |||||||| ||||||||||||||  |||||||   || ||||| | |||||| | |||||| ||||||||||||    
T  20467157 tgtttgagagagctaatggaaacagtttatgacatgttcatatgctgttttcggctaattttgacaagctcgctaggatatcttatgaaaaca 20467249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 20669243 - 20669179
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||  |||||||   || |||| ||||||||||||| |||||||||||||||||    
T  20669243 atgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaaca 20669179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 692
Target Start/End: Original strand, 24158526 - 24158566
Alignment:
Q  652 aactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  24158526 aacttatttccataagctctccaggatagcttatgaaaaca 24158566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 723 - 779
Target Start/End: Complemental strand, 25964416 - 25964360
Alignment:
Q  723 attttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcactt 779  Q
    ||||||| || ||||||||||||||||||| || |||  ||||||||||||||||||    
T  25964416 attttatcttttgttataaaaatagcttatacaaaagaacttatatgataagcactt 25964360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 587 - 752
Target Start/End: Original strand, 36646340 - 36646507
Alignment:
Q  587 gcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatg 686  Q
    |||||||| ||||| |||| |||| |||||| ||||   | ||| ||||| ||||  ||||||| | || ||||  |||| ||||| |||||||||||||    
T  36646340 gcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatg 36646439  T
Q  687 aaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttat 752  Q
    ||||||||||||   |||||  ||||||||   |||| ||||||| || ||| ||| |||||||||||    
T  36646440 aaaacaagttataacttatatgaaaacaattatactttattttatcttttgtcatagaaatagcttat 36646507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 40665500 - 40665436
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||  ||||||| | || ||||| |||||||||||| |||| ||||||||||||    
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaaca 40665436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 716 - 776
Target Start/End: Original strand, 41028940 - 41029000
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagca 776  Q
    |||||| ||||| | || ||||||| ||||||||||| ||||||| |||||||||||||||    
T  41028940 tgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataagca 41029000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 690
Target Start/End: Complemental strand, 2825199 - 2825156
Alignment:
Q  647 ttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||||| || |||||||||||||||||| |||||||||||||||    
T  2825199 ttttaagcttattttcataagctctccaagatagcttatgaaaa 2825156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 773
Target Start/End: Original strand, 16790463 - 16790502
Alignment:
Q  734 tgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  16790463 tgttataaaaatagcttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 771
Target Start/End: Complemental strand, 34958309 - 34958254
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgat 771  Q
    |||||| ||||||| |||||||||| |||||| |||| |||||| |||||||||||    
T  34958309 tgactttattttatcttgtgttatagaaatagtttattcataagtgcttatatgat 34958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 634
Target Start/End: Complemental strand, 50760707 - 50760656
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacat 634  Q
    |||||||||||| | || | |||||||||||||||||||| |||||||||||    
T  50760707 ataagcacttgtgacaccgcttgagagaacttatgaaaactgttcatgacat 50760656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 662 - 692
Target Start/End: Original strand, 24887316 - 24887346
Alignment:
Q  662 cataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||||||||||||||||||||||    
T  24887316 cataagctctccaggatagcttatgaaaaca 24887346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 623
Target Start/End: Original strand, 25182908 - 25182981
Alignment:
Q  549 ctgtttggattgacttatttgaggctattcttgtataagcacttgttagactgtttgagagaacttatgaaaaca 623  Q
    ||||||||| |||||||||||||  ||  ||  |||||| |||||| ||||||||||||||| ||||||||||||    
T  25182908 ctgtttggagtgacttatttgagcttac-ctactataagaacttgtgagactgtttgagagagcttatgaaaaca 25182981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 641
Target Start/End: Complemental strand, 25258888 - 25258830
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    ||||| |||||| ||||| |||||| ||||||||||||| |||| ||||||||| ||||    
T  25258888 ataagtacttgtgagactttttgagtgaacttatgaaaagagtttatgacatgtgcata 25258830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 598 - 672
Target Start/End: Original strand, 33880526 - 33880599
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctc 672  Q
    |||||||| |||||||||||||||||| |||||| |||| ||||  ||||||||| || |||| | |||||||||    
T  33880526 actgtttgggagaacttatgaaaacagatcatga-atgtccataagctgttttaatcttatttgcctaagctctc 33880599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 624
Target Start/End: Original strand, 47903998 - 47904075
Alignment:
Q  549 ctgtttggattgacttatttgaggctat--tcttgtataagcacttgttagactgtttgagagaacttatgaaaacag 624  Q
    |||||||||||||||||||||||  |||  |||  ||||||| | ||| | |||||||| ||||||||||||||||||    
T  47903998 ctgtttggattgacttatttgagtttatcctctgatataagctcctgtgacactgtttgggagaacttatgaaaacag 47904075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 621
Target Start/End: Complemental strand, 50016002 - 50015964
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaa 621  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  50016002 ataaacacttgtgagactgtttgagagaacttatgaaaa 50015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 598 - 672
Target Start/End: Complemental strand, 53952149 - 53952075
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctc 672  Q
    ||||||| ||||||||||||||||||| | || ||||||||||   ||||||| | || |||||||||| |||||    
T  53952149 actgtttaagagaacttatgaaaacagctgataacatgttcatgagctgttttcagcttattttcataaactctc 53952075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 636
Target Start/End: Original strand, 2413633 - 2413686
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 636  Q
    |||| ||||||| || |||||||||||| ||||||||||| | |||||||||||    
T  2413633 ataatcacttgtaagtctgtttgagagagcttatgaaaacggctcatgacatgt 2413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 692
Target Start/End: Original strand, 3845524 - 3845625
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||| ||||||||||| ||||| | |||| |||| | ||||||| || |||  || |||| | || ||||||||||| |||||| |||| ||||||||||    
T  3845524 ttgtgagactgtttgatagaacatctgaagacagattatgacatttttataatcttttttcagcttattttcataagttctccaagataacttatgaaaa 3845623  T
Q  691 ca 692  Q
    ||    
T  3845624 ca 3845625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 538 - 571
Target Start/End: Original strand, 16072948 - 16072981
Alignment:
Q  538 acacttacgacctgtttggattgacttatttgag 571  Q
    ||||||| ||||||||||||||||||||||||||    
T  16072948 acacttaggacctgtttggattgacttatttgag 16072981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 685
Target Start/End: Original strand, 23808031 - 23808120
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    |||| ||||| || ||||||||||| ||| | |||||||||||| |   |||||| | || |||||||||| ||||||| ||||||||||    
T  23808031 agacggtttgggaaaacttatgaaagcagcttatgacatgttcacaaattgttttcatcttattttcataaactctccaagatagcttat 23808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 692
Target Start/End: Complemental strand, 24280763 - 24280718
Alignment:
Q  647 ttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||| |||| |||||||||||||||||| |||||||||||| ||||    
T  24280763 ttttcaacttattttcataagctctccatgatagcttatgacaaca 24280718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 663 - 692
Target Start/End: Original strand, 44284114 - 44284143
Alignment:
Q  663 ataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||||||||||||||||||    
T  44284114 ataagctctccaggatagcttatgaaaaca 44284143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 692
Target Start/End: Original strand, 50600144 - 50600241
Alignment:
Q  595 tagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||  ||||||||| ||||||  ||||||||||| ||    ||||||| | || ||||||||||| ||||||  |||||| |||||||||    
T  50600144 tagactgtttggaagaacttataaaaacaactcatgacatgtccacgagctgttttcagcttattttcataagttctccaatatagctgatgaaaaca 50600241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 693
Target Start/End: Original strand, 52323848 - 52323960
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttca--taagctctccaggatag 680  Q
    |||||||||||  |||||||||| |||| |||||  ||| | || |||||| || ||||  ||||||| |||| |||| ||  ||||||||||| |||||    
T  52323848 ataagcacttgcaagactgtttgtgagagcttattgaaataatttatgacacgtccataagctgttttcaacttatttccacataagctctccaagatag 52323947  T
Q  681 cttatgaaaacaa 693  Q
    ||||| |||||||    
T  52323948 cttatcaaaacaa 52323960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 3e-23; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 598 - 767
Target Start/End: Original strand, 42215275 - 42215446
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagtta 697  Q
    |||||||| ||||||| |||||||||| | ||||| ||||||||  ||||||| | || |||| |||||||||||||||||||| |||||||| | ||||    
T  42215275 actgtttgggagaactaatgaaaacagcttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggtta 42215374  T
Q  698 tttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataagcgcttata 767  Q
    |  ||||||||||||||   |||||| ||||||| |  |||| || |||||| | |||||||||||| ||||    
T  42215375 tagattatacaaaaacagtttgactttattttatctcatgttgtagaaatagttcatccataagcgcatata 42215446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 582 - 698
Target Start/End: Original strand, 39551162 - 39551278
Alignment:
Q  582 tataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagc 681  Q
    |||||||| |||| | |||||||| ||||| ||||| |||||  | ||||||||| || |  ||||||| |||| ||||| ||||||||||||||| |||    
T  39551162 tataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagc 39551261  T
Q  682 ttatgaaaacaagttat 698  Q
    |||||||||||| ||||    
T  39551262 ttatgaaaacaacttat 39551278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 595 - 693
Target Start/End: Complemental strand, 12851280 - 12851182
Alignment:
Q  595 tagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    ||||||||||| || ||||||||||||||| | || |||||||||||   ||||||   || |||||||||||||||| |||| |||||||||||||||    
T  12851280 tagactgtttgggaaaacttatgaaaacagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaa 12851182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 583 - 692
Target Start/End: Original strand, 11569411 - 11569520
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||| ||||||| ||||||||| ||||| |||||| |||||| | ||||||||| ||||   |||||| | || ||||||| || ||||||| |||||||    
T  11569411 ataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagct 11569510  T
Q  683 tatgaaaaca 692  Q
    ||||||||||    
T  11569511 tatgaaaaca 11569520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 20672821 - 20672757
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||  ||||||| | || ||||||||||||||||||||||||||||| ||||||    
T  20672821 atgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 607 - 693
Target Start/End: Original strand, 26473730 - 26473816
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    |||| ||||||||||||| | |||||||||  |||  ||  ||| |||| |||||||||||||||| ||||||||||||||||||||    
T  26473730 gagagcttatgaaaacagcttatgacatgtctataagctagttttaacttattttcataagctctctaggatagcttatgaaaacaa 26473816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 692
Target Start/End: Complemental strand, 30389200 - 30389106
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||| | |||||||| || | ||||||||||||||   |||||| | || ||||||||||| |||| |||| ||||||||||||||    
T  30389200 actgtttgagagagcatatgaaaatagctaatgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaaca 30389106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 596 - 693
Target Start/End: Original strand, 7918413 - 7918510
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    |||||||||| |||| ||||||||||||  | | ||||||||||||  ||||||  |||| ||||  |||||||||||| ||||||||| ||||||||    
T  7918413 agactgtttgggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaacaa 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 679 - 766
Target Start/End: Complemental strand, 926508 - 926418
Alignment:
Q  679 agcttatgaaaacaagttatttattatacaaaaacaat---gacttaattttatgttgtgttataaaaatagcttatccataagcgcttat 766  Q
    ||||||||||||||| ||||  || ||||||||||| |   ||||| ||||||| |||||||||| ||||||||||| |||| ||||||||    
T  926508 agcttatgaaaacaacttatagataatacaaaaacagttttgactttattttatcttgtgttatagaaatagcttattcatatgcgcttat 926418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 647 - 691
Target Start/End: Complemental strand, 1433600 - 1433556
Alignment:
Q  647 ttttaaactcattttcataagctctccaggatagcttatgaaaac 691  Q
    |||| |||| |||||||||||||||||||||||||||||||||||    
T  1433600 ttttcaacttattttcataagctctccaggatagcttatgaaaac 1433556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 595 - 698
Target Start/End: Original strand, 9956779 - 9956883
Alignment:
Q  595 tagactgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    ||||| ||||||||||||||||||||| |||| ||| ||| |||||||    ||||| | || ||||||||||| |||||| ||||| ||||||||||||    
T  9956779 tagaccgtttgagagaacttatgaaaatagtttatggcattgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaa 9956878  T
Q  694 gttat 698  Q
     ||||    
T  9956879 cttat 9956883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 641
Target Start/End: Complemental strand, 16162913 - 16162818
Alignment:
Q  548 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    ||||||||||||| ||||||||||  |||   || | |||| ||||||| ||||||||||||| ||||||||||||||| | ||||| ||||||||    
T  16162913 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgacctgttcata 16162818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 602 - 692
Target Start/End: Complemental strand, 1930133 - 1930042
Alignment:
Q  602 tttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||| |||||||| ||||||||||| ||||||| |||||||  ||||||| | || ||||||| ||| || ||| |||||||||||||||||    
T  1930133 tttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaaca 1930042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 732 - 817
Target Start/End: Complemental strand, 4389908 - 4389826
Alignment:
Q  732 tgtgttataaaaatagcttatccataagcgcttatatgataagcacttcttatgatgtaagttgcaaattaagttatttatccaaa 817  Q
    ||||||||| ||||||||||| |||| | ||| ||||||||||||||||   || | |||| |||||| |||||||||||||||||    
T  4389908 tgtgttatagaaatagcttattcatatgtgctcatatgataagcacttc---tgctataagctgcaaaataagttatttatccaaa 4389826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 607 - 698
Target Start/End: Complemental strand, 5088944 - 5088853
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||| |||||| |||||||| || |||||| ||||  ||||||| |||| ||||  |||||||||||||||| |||| ||||||||| ||||    
T  5088944 gagagcttatggaaacagtttataacatgtccataagctgttttcaacttatttcaataagctctccaggatcgcttgtgaaaacaacttat 5088853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 548 - 672
Target Start/End: Complemental strand, 9700154 - 9700028
Alignment:
Q  548 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccct 645  Q
    |||||||||||| |||||||||||  |||   || | |||| ||||||| ||||| ||||||||| ||| ||||| || || ||||||||| ||||  ||    
T  9700154 cctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagct 9700055  T
Q  646 gttttaaactcattttcataagctctc 672  Q
    ||||| | || ||||||||||||||||    
T  9700054 gttttcaccttattttcataagctctc 9700028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 583 - 690
Target Start/End: Original strand, 30191095 - 30191202
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||||||||||||||||||||| |||| |||||| |||||  | |||||||||||| | | |||||| | || |||| ||||| |  | ||||||||||    
T  30191095 ataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagct 30191194  T
Q  683 tatgaaaa 690  Q
    ||| ||||    
T  30191195 tatcaaaa 30191202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 613 - 692
Target Start/End: Original strand, 35220707 - 35220786
Alignment:
Q  613 ttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||||| ||||||||  ||||  || |||| | || ||||| ||||||||||||| ||||||||||||||||    
T  35220707 ttatgaaaacagtttatgacatgcccataagctatttttagcttatttttataagctctccagaatagcttatgaaaaca 35220786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 693
Target Start/End: Original strand, 2458544 - 2458630
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    ||||||||||||| |||| | ||| ||||||||||  ||||||| |  | |||| ||||||||||| ||||||||||||| ||||||    
T  2458544 gagaacttatgaagacagcttatggcatgttcataagctgttttcagtttatttccataagctctctaggatagcttatgtaaacaa 2458630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 674
Target Start/End: Complemental strand, 10120859 - 10120781
Alignment:
Q  597 gactgtttgagagaacttatgaaaacagttcatgacatgt-tcataccctgttttaaactcattttcataagctctcca 674  Q
    |||||||||||||||||||||||||||| | ||||||| | |||||  ||||||| | || ||||||||||| ||||||    
T  10120859 gactgtttgagagaacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctcca 10120781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 716 - 778
Target Start/End: Complemental strand, 14482183 - 14482121
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcact 778  Q
    |||||| ||||||| || ||||||| |||||| |||| ||||||| |||||||||||||||||    
T  14482183 tgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcact 14482121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 692
Target Start/End: Complemental strand, 25097427 - 25097393
Alignment:
Q  658 ttttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||||||||||||||||||||||||||    
T  25097427 ttttcataagctctccaggatagcttatgaaaaca 25097393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 650
Target Start/End: Original strand, 41442420 - 41442474
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgtttt 650  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||  |||||||    
T  41442420 agactgtttgacagaacttatgaaaacaatttatgacatgttcatatgctgtttt 41442474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 779
Target Start/End: Original strand, 28769256 - 28769491
Alignment:
Q  548 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccct 645  Q
    ||||||| ||||| ||||||| |||||||   || | |||||||||||| ||| | ||||||||| ||| || ||| ||   |||| |||| ||||   |    
T  28769256 cctgttttgattgtcttattttaggctatctactggcataagcacttgtgagattatttgagagagcttgtgtaaatagcatatgatatgtccataagtt 28769355  T
Q  646 gttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaa 743  Q
    ||||| | || |||| ||||| |||||||  ||||||||||||||||  ||||   |||||  |||| | |  |||||||||||||  | |||||||  |    
T  28769356 gttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttatagtttgttatagga 28769455  T
Q  744 atagcttatccataagcgcttatatgataagcactt 779  Q
    ||||||||| |||||||  |||||||||||||||||    
T  28769456 atagcttatacataagcatttatatgataagcactt 28769491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 657 - 698
Target Start/End: Complemental strand, 43709315 - 43709274
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  43709315 attttcataagctctccaggatagctcatgaaaacaacttat 43709274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 692
Target Start/End: Original strand, 44236777 - 44236886
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| |||||||| | |||||  |||||||| || ||| |||||| || ||   | |||| | || ||||||||||||||||||  ||||||    
T  44236777 ataagcacttgtgagactgttcgggagaatctatgaaaatagctcacgacatgctcttaagttattttcagcttattttcataagctctccaatatagct 44236876  T
Q  683 tatgaaaaca 692  Q
    ||||||||||    
T  44236877 tatgaaaaca 44236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 583 - 623
Target Start/End: Original strand, 2487962 - 2488002
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaaca 623  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  2487962 ataagcacttgtgagactgtttgggagaacttatgaaaaca 2488002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 692
Target Start/End: Original strand, 9836877 - 9836917
Alignment:
Q  652 aactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  9836877 aactcatttccataagctctccaagatagcttatgaaaaca 9836917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 607 - 758
Target Start/End: Complemental strand, 13459737 - 13459585
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattata 706  Q
    |||||||||||||||||| | ||||||| ||||||  ||||||| | |  |||||||||||||||  |||||   |||||||||||| ||||   |||||    
T  13459737 gagaacttatgaaaacagcttatgacattttcataaactgttttcagcctattttcataagctctgtaggatgatttatgaaaacaacttatagcttata 13459638  T
Q  707 ca-aaaacaatgacttaattttatgttgtgttataaaaatagcttatccataa 758  Q
    || ||||   |||||| ||||||| || | | ||| ||||||||||| |||||    
T  13459637 cacaaaaagttgacttcattttatcttttatcatagaaatagcttatacataa 13459585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 583 - 698
Target Start/End: Complemental strand, 24558967 - 24558854
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||| ||||||| |||||||||| |||||| ||||||||  ||| |||||| |||||||  || | || |||| |||| ||| |  |||||| |||||||    
T  24558967 ataaacacttgtgagactgtttgggagaacctatgaaaa--gtttatgacacgttcataagctatgttcaacttatttacattaagtctccaagatagct 24558870  T
Q  683 tatgaaaacaagttat 698  Q
    ||||||||||| ||||    
T  24558869 tatgaaaacaacttat 24558854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 583 - 735
Target Start/End: Complemental strand, 34849220 - 34849065
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacag-ttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagc 681  Q
    ||||| |||| | |||||||||| ||||||| |||||||||  || ||||||||||||||  | ||||| | || |||| |||||| ||| || || |||    
T  34849220 ataagtacttttgagactgtttgggagaactaatgaaaacaactttatgacatgttcataagccgttttcagctgatttccataagttctacaagaaagc 34849121  T
Q  682 ttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtg 735  Q
    |||||| ||||  |||| | ||||||||||| ||  |||||| ||||||| |||||    
T  34849120 ttatgataacagcttatatcttatacaaaaataatgtgactttattttatcttgtg 34849065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 591 - 674
Target Start/End: Original strand, 35643949 - 35644033
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgac-atgttcataccctgttttaaactcattttcataagctctcca 674  Q
    |||| |||||||||| || |||||||||||| |||| ||||| || ||||||  || |||| |||| ||||||||||||||||||    
T  35643949 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctctcca 35644033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 600 - 692
Target Start/End: Complemental strand, 40071848 - 40071756
Alignment:
Q  600 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||| |||| |||||| |||||  | ||||||||||||||  | | ||| |||| ||||||||||||| || |||||||||| ||||||||    
T  40071848 tgtttgggagagcttatggaaacaacttatgacatgttcataatcagctttcaactaattttcataagctttctaggatagcttctgaaaaca 40071756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 779
Target Start/End: Complemental strand, 6918992 - 6918949
Alignment:
Q  736 ttataaaaatagcttatccataagcgcttatatgataagcactt 779  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||    
T  6918992 ttataaaaatagcttatacataagcacttatatgataaacactt 6918949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 692
Target Start/End: Complemental strand, 27028873 - 27028838
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||||||||| |||||||||||||||||    
T  27028873 attttcataagctctccaagatagcttatgaaaaca 27028838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 766
Target Start/End: Original strand, 34522070 - 34522195
Alignment:
Q  645 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatac-aaaaacaa---tgacttaattttatgttgtgttata 740  Q
    |||||| | ||||||||||||||||||  |||||||||| |||||| |  || |  ||||||| |||||  |   |||||| ||||||| |||||| |||    
T  34522070 tgtttttacctcattttcataagctctttaggatagcttttgaaaataccttttagattatactaaaaagtagtttgactttattttatcttgtgtcata 34522169  T
Q  741 aaaatagcttatccataagcgcttat 766  Q
     ||||||||||| |||||||||||||    
T  34522170 gaaatagcttattcataagcgcttat 34522195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 548 - 623
Target Start/End: Original strand, 6526169 - 6526246
Alignment:
Q  548 cctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaaca 623  Q
    |||||||||||||||||||| ||| ||||   || | |||||| ||||| ||| |||||||||||||||| |||||||    
T  6526169 cctgtttggattgacttattcgagcctatctactggcataagcccttgtgagattgtttgagagaacttaggaaaaca 6526246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 758
Target Start/End: Complemental strand, 7646322 - 7646145
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||||||| || | | |||||| ||||| |||||||||| | | |||||||||| ||   || |||| | || |||| |||||||||||| ||  ||||    
T  7646322 ataagcactagtgacaatgtttgggagaatttatgaaaactgcttatgacatgttgatcagctattttcagcttatttccataagctctcctggtcagct 7646223  T
Q  683 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataa 758  Q
    |||||| |||  ||||  |||||||||||||||  | |||| ||||||  || | ||||| ||||||||||| |||||    
T  7646222 tatgaagacagtttatagattatacaaaaacaatttaactttattttaccttttcttatagaaatagcttatacataa 7646145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 693
Target Start/End: Complemental strand, 10923712 - 10923602
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||| ||||||| ||||  |||||||||  ||||||||||| |  | ||||| |  |||  ||||||| | || ||||||||||||||||||| ||||||    
T  10923712 ataaacacttgtaagacaatttgagagagtttatgaaaacaatgtaagacatatcaataaactgtttttatcttattttcataagctctccagaatagct 10923613  T
Q  683 tatgaaaacaa 693  Q
     ||||||||||    
T  10923612 aatgaaaacaa 10923602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 580 - 626
Target Start/End: Complemental strand, 10939494 - 10939448
Alignment:
Q  580 tgtataagcacttgttagactgtttgagagaacttatgaaaacagtt 626  Q
    ||||||||||||| | |||||||||  ||||||||||||||||||||    
T  10939494 tgtataagcacttctgagactgtttaggagaacttatgaaaacagtt 10939448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 662 - 757
Target Start/End: Original strand, 13561345 - 13561442
Alignment:
Q  662 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccata 757  Q
    ||||||||||| | |||||||| ||||||||||||||   |||||  |||||||  |||||| |||| || || ||||||| ||||||||||| ||||    
T  13561345 cataagctctcaatgatagcttgtgaaaacaagttataatttatatgaaaacaatttgactttatttaattttctgttatagaaatagcttattcata 13561442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 692
Target Start/End: Complemental strand, 26410396 - 26410286
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaac-tcattttcataagctctccaggatagc 681  Q
    |||||||||| | |||||| ||| |||| |||||| |||||| ||||||||||| || |  ||||||| | | | |||| |||||||||||||||| ||     
T  26410396 ataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtccagaagctgtttttagctttatttccataagctctccaggacagt 26410297  T
Q  682 ttatgaaaaca 692  Q
    || ||||||||    
T  26410296 ttttgaaaaca 26410286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 663 - 692
Target Start/End: Original strand, 6509337 - 6509366
Alignment:
Q  663 ataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||||||||||||||||||    
T  6509337 ataagctctccaggatagcttatgaaaaca 6509366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 690
Target Start/End: Original strand, 10075579 - 10075612
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaa 690  Q
    |||||||||||||||| |||||||||||||||||    
T  10075579 attttcataagctctctaggatagcttatgaaaa 10075612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 689
Target Start/End: Complemental strand, 11795163 - 11795102
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    ||||||||| |||| |||||||| | || |||| |||||||||||||  |||||||||||||    
T  11795163 atgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaa 11795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 582 - 692
Target Start/End: Complemental strand, 12361311 - 12361199
Alignment:
Q  582 tataagcacttgttagactgtttgagagaa--cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggata 679  Q
    |||||| |||||||||||| |||||||||   |||||  ||| || | ||||||||| ||||  ||||||| |||| |||| ||| |||||||| | |||    
T  12361311 tataagtacttgttagactctttgagagagatcttatagaaatagcttatgacatgtccataagctgttttcaacttatttccattagctctcctgaata 12361212  T
Q  680 gcttatgaaaaca 692  Q
     ||||||||||||    
T  12361211 acttatgaaaaca 12361199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 641
Target Start/End: Complemental strand, 25097478 - 25097433
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    |||||||||| |||||| ||||| ||||| ||||||||||||||||    
T  25097478 agactgtttgggagaacatatgagaacagctcatgacatgttcata 25097433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 698
Target Start/End: Complemental strand, 34551162 - 34551121
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    ||||||||||||||||||||||| |||| |||||||| ||||    
T  34551162 attttcataagctctccaggataacttaagaaaacaacttat 34551121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 636
Target Start/End: Complemental strand, 34770984 - 34770931
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 636  Q
    |||||||||||| | ||||||||||||| | ||||||||||| | |||||||||    
T  34770984 ataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgt 34770931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 743
Target Start/End: Complemental strand, 38537617 - 38537545
Alignment:
Q  673 caggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaa 743  Q
    |||||||| |||||||| ||  ||||  |||||||||||||||  |||||| ||||||| |||||||||||||    
T  38537617 caggatagtttatgaaagcagcttatagattatacaaaaacaaattgacttcattttatcttgtgttataaaa 38537545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 580 - 621
Target Start/End: Original strand, 41398059 - 41398100
Alignment:
Q  580 tgtataagcacttgttagactgtttgagagaacttatgaaaa 621  Q
    ||||||||||| ||  ||||||||||||||||||||||||||    
T  41398059 tgtataagcacctgcgagactgtttgagagaacttatgaaaa 41398100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 2e-21; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 583 - 688
Target Start/End: Original strand, 31517694 - 31517799
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| |||||||||| |||||||||| ||||||  ||||||||||||||||  ||||||| | || |||||||||||||||||| || || |    
T  31517694 ataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagat 31517793  T
Q  683 tatgaa 688  Q
    ||||||    
T  31517794 tatgaa 31517799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 598 - 692
Target Start/End: Complemental strand, 37811953 - 37811859
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||| |||||||||||||||||||||| | ||||||||||||||  ||||||| |||| |||| ||| ||||||||| ||| |||||||||||||    
T  37811953 actggttgagagaacttatgaaaacagcttatgacatgttcataaactgttttcaacttatttccattagctctccatgatggcttatgaaaaca 37811859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 620 - 758
Target Start/End: Original strand, 36151496 - 36151636
Alignment:
Q  620 aacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tg 717  Q
    ||||||| ||||||||| |||| |||||||| |||| |||||||||||||| | ||||| | ||| |||||||| ||||   |||||| |||||||  ||    
T  36151496 aacagtttatgacatgtccataacctgttttcaacttattttcataagctcactaggattgtttacgaaaacaatttataacttatacgaaaacaatttg 36151595  T
Q  718 acttaattttatgttgtgttataaaaatagcttatccataa 758  Q
    |||| ||||||| || ||||||  ||||||||||| |||||    
T  36151596 actttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 548 - 770
Target Start/End: Complemental strand, 17269403 - 17269177
Alignment:
Q  548 cctgtttggattgacttatttgaggctat--tcttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccct 645  Q
    |||||||||||||||||||||||   |||  |||| | ||| ||||||| ||| ||||||  ||  |||||||||| |  | |||||||||||||    |    
T  17269403 cctgtttggattgacttatttgaacttatcttcttatttaaacacttgtgagattgtttggtagtgcttatgaaaataccttatgacatgttcatgagtt 17269304  T
Q  646 gttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaa 743  Q
    ||||| |||| |||  | |||||||||||||||||||||||||||||| |||||  |||||  |||||||  |||||| |||||   || |||| || ||    
T  17269303 gtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaa 17269204  T
Q  744 atagcttatccataagcgcttatatga 770  Q
    ||| ||||| ||||||| |||||||||    
T  17269203 ataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 609 - 693
Target Start/End: Complemental strand, 35925780 - 35925696
Alignment:
Q  609 gaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    |||||||||||||||| | ||||||||||||||  ||||||| |||| |||| ||||| ||||||| ||||||||||| ||||||    
T  35925780 gaacttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttatggaaacaa 35925696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 583 - 759
Target Start/End: Original strand, 10199362 - 10199540
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| | ||| |||| ||||||| ||||||| || | ||||||||||||||   |||||| | || |||||||||||||||| |  ||||||    
T  10199362 ataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagct 10199461  T
Q  683 tatgaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataag 759  Q
    |||||||| |  ||||  ||||||| |||| |   |||||| ||||||| ||| |||||| ||||| |||||| |||||    
T  10199462 tatgaaaaaagcttatcgattatacgaaaatagtttgactttattttatcttgggttatagaaataacttatctataag 10199540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 584 - 690
Target Start/End: Complemental strand, 4445823 - 4445717
Alignment:
Q  584 taagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagctt 683  Q
    ||||||||||| |||||||||| ||||| |||||||| ||| | || ||||||||| |  ||||||| |||| ||||||| |||||||||| |  |||||    
T  4445823 taagcacttgtgagactgtttgggagaatttatgaaagcagcttataacatgttcagaagctgttttcaacttattttcacaagctctccaagtcagctt 4445724  T
Q  684 atgaaaa 690  Q
    |||||||    
T  4445723 atgaaaa 4445717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 583 - 689
Target Start/End: Original strand, 37593638 - 37593744
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||| |||||||||||||||||| || |||| ||||| |||  | ||||||||||||||  ||||||| | || ||||||||||||||| ||  ||||||    
T  37593638 ataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagct 37593737  T
Q  683 tatgaaa 689  Q
    |||||||    
T  37593738 tatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 583 - 691
Target Start/End: Original strand, 49692006 - 49692112
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||| |||||| |||||||||||||||||||||||||| || | ||||||||| ||||   |||||| | || |||||||| || ||||||||||| ||    
T  49692006 ataagaacttgtgagactgtttgagagaacttatgaaaatagcttatgacatgtccatagtttgttttcagct-attttcat-agttctccaggataact 49692103  T
Q  683 tatgaaaac 691  Q
    |||||||||    
T  49692104 tatgaaaac 49692112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 716 - 775
Target Start/End: Complemental strand, 871026 - 870967
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagc 775  Q
    |||||||||||||| || |||||||||||||| |||| ||||||| ||||||||||||||    
T  871026 tgacttaattttatcttttgttataaaaatagtttatacataagcacttatatgataagc 870967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 647 - 759
Target Start/End: Complemental strand, 35017628 - 35017512
Alignment:
Q  647 ttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca----atgacttaattttatgttgtgttataaa 742  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||   |||  ||||||| ||||||     |||||| ||||||| |||| |||||||    
T  35017628 ttttcaacttatttccataagctctccaggacagcttatgaaaacagcatatagattatacgaaaacagtgtttgactttattttatcttgtattataaa 35017529  T
Q  743 aatagcttatccataag 759  Q
    |||||||||| ||||||    
T  35017528 aatagcttattcataag 35017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 612 - 698
Target Start/End: Complemental strand, 25479668 - 25479582
Alignment:
Q  612 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||||||||| || | |||||||||||||    |||||| | || |||||||||||||||| |||||||||||||||||||| ||||    
T  25479668 cttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttat 25479582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 644 - 774
Target Start/End: Complemental strand, 4200284 - 4200152
Alignment:
Q  644 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataa 741  Q
    ||||||||| || |||||||||||| |||||||||| |||| ||||||||  |||   |||||  |||||||  |||||| ||||||| || ||||||||    
T  4200284 ctgttttaagcttattttcataagccctccaggatatcttacgaaaacaatatatagcttatatgaaaacaacttgactttattttatcttttgttataa 4200185  T
Q  742 aaatagcttatccataagcgcttatatgataag 774  Q
    ||||| |||||  |||| | |||| ||||||||    
T  4200184 aaataacttatatataaacacttagatgataag 4200152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 583 - 712
Target Start/End: Original strand, 7136952 - 7137081
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||| ||||||||| |  |||||| ||||||||||||||  | | ||||||| ||||||   | |||| | || ||||||||||| |||||| |||||||    
T  7136952 ataaacacttgttaaagagtttgaaagaacttatgaaaatcgcttatgacatattcataagttattttcagcttattttcataagttctccaagatagct 7137051  T
Q  683 tatgaaaacaagttatttattatacaaaaa 712  Q
    ||||||||||  ||||  ||||||||||||    
T  7137052 tatgaaaacagcttatagattatacaaaaa 7137081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 628 - 716
Target Start/End: Complemental strand, 7472383 - 7472294
Alignment:
Q  628 atgacatgttcatacc-ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat 716  Q
    ||||||||||||||   ||||||| | || |||||||||||||||||| ||||||||||| |||||  ||||  ||||||||||||||||    
T  7472383 atgacatgttcataaaactgttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaat 7472294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 604 - 693
Target Start/End: Original strand, 24460382 - 24460471
Alignment:
Q  604 tgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    |||||||| ||||||||| || | ||||||||||||||  ||||||  | || |||||  ||||||||| ||||||||||||||||||||    
T  24460382 tgagagaaattatgaaaatagcttatgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagcttatgaaaacaa 24460471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 583 - 692
Target Start/End: Original strand, 33723336 - 33723445
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||| ||||||| |||||| ||| || |||||||| |||||| |||||||||||||||    |||||| | || |||| |||||||| | |||| |||||    
T  33723336 ataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcatgagatgttttcagcttatttccataagctttacagggtagct 33723435  T
Q  683 tatgaaaaca 692  Q
    ||||||||||    
T  33723436 tatgaaaaca 33723445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 602 - 750
Target Start/End: Complemental strand, 3924721 - 3924571
Alignment:
Q  602 tttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttattta 701  Q
    ||||||| |||||||||||||| || |||| ||||| |||   ||||||   || |||| ||||| |||| ||||||||||||| ||||||| | ||  |    
T  3924721 tttgagaaaacttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaactaataga 3924622  T
Q  702 ttatacaaaaaca--atgacttaattttatgttgtgttataaaaatagctt 750  Q
    |||||| ||||||   || ||| ||||||| |||||||||| |||||||||    
T  3924621 ttatacgaaaacagtttgccttgattttatcttgtgttatagaaatagctt 3924571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 583 - 690
Target Start/End: Complemental strand, 6279515 - 6279408
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||||||||||  | |||||||||||| |||||| |||||||| |  |||||| ||||   |||||| | |  |||| ||||||||||| |||||||||    
T  6279515 ataagcacttgtgtggctgtttgagagagcttatggaaacagttaaccacatgtccataagttgttttcagcgtatttccataagctctctaggatagct 6279416  T
Q  683 tatgaaaa 690  Q
    ||||||||    
T  6279415 tatgaaaa 6279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 692
Target Start/End: Original strand, 172492 - 172639
Alignment:
Q  550 tgtttggattgacttatttgaggctatt--cttgtataagcacttgtt---agactgtttgagagaacttatgaaaacagttcatgacatgttcataccc 644  Q
    ||||||||||||||||||||||  |||   ||||  ||||||||||||   | ||||| || ||||| |||||||||||||| ||| ||||||||||  |    
T  172492 tgtttggattgacttatttgagtttatctacttgcctaagcacttgttgtgacactgtctgggagaatttatgaaaacagtttatggcatgttcataggc 172591  T
Q  645 tgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||| |||| || |  ||||  |||||| ||||||| |||||||||    
T  172592 tgtttttaacttatatcaataatttctccaagatagctaatgaaaaca 172639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 644 - 698
Target Start/End: Original strand, 7218089 - 7218143
Alignment:
Q  644 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    ||||||| |||| ||||||||||| |||||||||||| |||||||||||| ||||    
T  7218089 ctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttat 7218143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 617 - 776
Target Start/End: Complemental strand, 10854815 - 10854654
Alignment:
Q  617 gaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca-- 714  Q
    |||||||| | |||||||||||| |  ||||||| | || |||||| |||||| | ||||||||  |||||||||||  |||  ||||||||||| ||      
T  10854815 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcttaagctgttcaggatagtatatgaaaacaacatatagattatacaaaatcagt 10854716  T
Q  715 atgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagca 776  Q
     |||||| ||||||| |||| ||  | ||||| ||||| ||||| | |||||||||||||||    
T  10854715 ttgactttattttatcttgtatttcagaaataacttattcataaccacttatatgataagca 10854654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 608 - 698
Target Start/End: Original strand, 37842334 - 37842424
Alignment:
Q  608 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    ||||||||||||||||  | ||||||||||||||  | ||||| | || ||||| ||||| ||| || |||||||||||||||||| ||||    
T  37842334 agaacttatgaaaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttat 37842424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 608 - 690
Target Start/End: Complemental strand, 43338207 - 43338125
Alignment:
Q  608 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||||||||| |||||| | ||||||||||||||  || |||| | |  |||||||||||||||||| | |||||||||||||    
T  43338207 agaacttatggaaacagcttatgacatgttcataatctattttcagcctattttcataagctctccatgttagcttatgaaaa 43338125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 688
Target Start/End: Original strand, 32515395 - 32515500
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| |||||||||| |||| |||||| ||||||   |||||||||  |||   |||||| |||| || |  |||||||||||| |||||||    
T  32515395 ataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatctataagctctccatgatagct 32515494  T
Q  683 tatgaa 688  Q
    ||||||    
T  32515495 tatgaa 32515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 624
Target Start/End: Original strand, 43371845 - 43371886
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacag 624  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  43371845 ataagcacttgtgagactgtttgagagagcttatgaaaacag 43371886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 5047227 - 5047155
Alignment:
Q  618 aaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    ||||||||| | ||||| ||||||| ||||||| | || |||| |||||||||| || |||||||||||||||    
T  5047227 aaaacagttaaggacatattcatacgctgttttcagcttatttccataagctcttcatgatagcttatgaaaa 5047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 586 - 690
Target Start/End: Original strand, 7262475 - 7262579
Alignment:
Q  586 agcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    ||||||| | |||| ||||  |||| ||||| ||||||| |  |||||||||||||  ||||||| | || |||| || ||||||| |||||||||||||    
T  7262475 agcacttttgagacggttttggagagcttataaaaacagcttttgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttat 7262574  T
Q  686 gaaaa 690  Q
    |||||    
T  7262575 gaaaa 7262579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 613 - 693
Target Start/End: Complemental strand, 11137930 - 11137851
Alignment:
Q  613 ttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    |||||||||||||| ||||||||||||||  ||||||| | ||  |||| |||||||| ||| |||||||||| |||||||    
T  11137930 ttatgaaaacagtttatgacatgttcatatgctgtttt-agcttttttttataagctcaccatgatagcttatcaaaacaa 11137851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 692
Target Start/End: Original strand, 11639399 - 11639479
Alignment:
Q  612 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||| | ||||||||| ||||  ||||||| | || |||||||||||||||| || ||| |||||| |||||    
T  11639399 cttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataacttatgcaaaca 11639479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 658 - 698
Target Start/End: Original strand, 25005826 - 25005866
Alignment:
Q  658 ttttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  25005826 tttttataagctctccaggatagcttatgaaaacaacttat 25005866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 698
Target Start/End: Complemental strand, 29723637 - 29723490
Alignment:
Q  553 ttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgtttt 650  Q
    ||||||||||| |||||||  ||||  || | |||||||||||| | || |||||| |||||| ||| |||||| | ||||||||| ||||  |||||||    
T  29723637 ttggattgactaatttgagcttatttactagcataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaactgtttt 29723538  T
Q  651 aaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
     |||| |||| ||||| | || |||| |||||| ||||| ||| ||||    
T  29723537 caacttatttacataaccactgcagggtagcttgtgaaagcaacttat 29723490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 657 - 693
Target Start/End: Original strand, 38651459 - 38651495
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaa 693  Q
    ||||| |||||||||||||||||||||||||||||||    
T  38651459 atttttataagctctccaggatagcttatgaaaacaa 38651495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 662 - 698
Target Start/End: Original strand, 47598454 - 47598490
Alignment:
Q  662 cataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47598454 cataagctctccaggatagcttatgaaaacaacttat 47598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 692
Target Start/End: Complemental strand, 4576907 - 4576812
Alignment:
Q  597 gactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||| |||||||||||| |||| |||||||||| |||   ||| || | || ||||||||||| | | ||  ||||||||||||||||    
T  4576907 gactgtttgagacaacttatgaaaatagtttatgacatgtttataagttgtgttcagcttattttcataagttattcaatatagcttatgaaaaca 4576812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 690
Target Start/End: Original strand, 4699597 - 4699676
Alignment:
Q  611 acttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||||||||||||  | ||||||||||||||  ||||||| | || ||||  ||||||||||| |||||| |||||||||    
T  4699597 acttatgaaaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaa 4699676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 674
Target Start/End: Complemental strand, 6292608 - 6292518
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctcca 674  Q
    |||||||||| | ||| |||||| ||||| || | ||||||| | ||||||||||||||  ||||||| | || ||||||||||||||||||    
T  6292608 ataagcacttttgagattgtttgggagaattttt-aaaacagcttatgacatgttcataagctgttttcagcttattttcataagctctcca 6292518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 692
Target Start/End: Complemental strand, 10744399 - 10744308
Alignment:
Q  601 gtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||| |||||||| ||||||||| | ||| ||||||||||  ||||||| | || ||||| ||||| |||| | || ||||||||||||||    
T  10744399 gtttgggagaacttgtgaaaacagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaaca 10744308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 775
Target Start/End: Complemental strand, 19389943 - 19389824
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaa-acaatgacttaattttatgttgtgttataaaaatagcttatcca 755  Q
    ||||||| |||||||||| |||||||||||||||| | | | || |||||||||| |   |||||| ||||||| |||||| |||||| || |||||  |    
T  19389943 attttcacaagctctccaagatagcttatgaaaactattaaattcttatacaaaacagtttgactttattttatattgtgtaataaaagtaacttattta 19389844  T
Q  756 taagcgcttatatgataagc 775  Q
    ||||   |||||||||||||    
T  19389843 taagttattatatgataagc 19389824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 685
Target Start/End: Original strand, 28689421 - 28689508
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    ||||||| |||||||||| | |||||| | ||||||||| ||||   |||||| | || ||||||||||||| |||| ||||||||||    
T  28689421 actgttttagagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttat 28689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 716
Target Start/End: Complemental strand, 39596682 - 39596580
Alignment:
Q  613 ttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaa 712  Q
    |||||||||||||| ||||||||||  ||  |||||| || || ||||| |||||||||||| |||||||||| ||| ||  ||||   |||||||||||    
T  39596682 ttatgaaaacagtttatgacatgttggtaagctgtttcaa-cttatttttataagctctccaagatagcttataaaaccatcttatagcttatacaaaaa 39596584  T
Q  713 caat 716  Q
    ||||    
T  39596583 caat 39596580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 690
Target Start/End: Complemental strand, 44422815 - 44422708
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||| ||||| | ||||||| || |||| |||||||||| || | ||||||||| ||||  |||  |  | || ||||||||||||||||||||||||||    
T  44422815 ataaacacttttgagactgtctgggagagcttatgaaaatagcttatgacatgtccataagctgactacagcttattttcataagctctccaggatagct 44422716  T
Q  683 tatgaaaa 690  Q
    ||| ||||    
T  44422715 tataaaaa 44422708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 637
Target Start/End: Original strand, 5421898 - 5421952
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgtt 637  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||| | ||||||||    
T  5421898 ataagcacttgtgagaccgtttgtgagaacttataaaaacagtttaagacatgtt 5421952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 614 - 680
Target Start/End: Complemental strand, 11695946 - 11695880
Alignment:
Q  614 tatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatag 680  Q
    |||| |||||||| ||||||||| ||||  ||||||| |||| ||||||||||||| ||||| ||||    
T  11695946 tatggaaacagtttatgacatgtccataagctgttttcaacttattttcataagctttccagaatag 11695880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 685
Target Start/End: Original strand, 19092338 - 19092439
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||| ||||  |||||||| |||| |  ||||||||| |||  ||||||||| ||||  ||||||| | || ||||||||||||||| ||||||||||    
T  19092338 ataagctcttgcgagactgttcgagacagtttatgaaaatagtctatgacatgt-cataaactgttttcaccttattttcataagctcttcaggatagct 19092436  T
Q  683 tat 685  Q
    |||    
T  19092437 tat 19092439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 641
Target Start/End: Complemental strand, 27807231 - 27807173
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||| | ||||| ||||||||    
T  27807231 ataagcatttgtaagactgtttgagagagcttatgaaagcagctgatgacgtgttcata 27807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 591 - 641
Target Start/End: Complemental strand, 38001704 - 38001654
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    |||| |||||||||| |||||||||||||||||| | ||||| ||||||||    
T  38001704 ttgtgagactgtttgggagaacttatgaaaacagcttatgacctgttcata 38001654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 690
Target Start/End: Original strand, 45667785 - 45667823
Alignment:
Q  652 aactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  45667785 aacttattttcataagctctccaggatagcttaagaaaa 45667823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 663
Target Start/End: Complemental strand, 4482031 - 4481966
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttca 663  Q
    ||||||||||||||||||||||||||  | || |||||||||||  ||||||| | || |||||||    
T  4482031 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 4481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 692
Target Start/End: Complemental strand, 4622209 - 4622100
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||| |||||||||||||||||  ||| || |||  ||||  | ||||||||| ||||  ||||||| | || ||||||| |||||||||| ||||||     
T  4622209 ataagaacttgttagactgtttggaagatctaatgggaacatcttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagca 4622110  T
Q  683 tatgaaaaca 692  Q
    |||| |||||    
T  4622109 tatggaaaca 4622100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 623
Target Start/End: Original strand, 5886911 - 5886982
Alignment:
Q  550 tgtttggattgacttatttgaggctattcttgtataagcacttgttagactgtttgagagaacttatgaaaaca 623  Q
    ||||||||||||||||||||| |||  ||| | ||||||| |||  |||||||||| |||||||||||||||||    
T  5886911 tgtttggattgacttatttga-gcttatctggcataagcaattgcgagactgtttg-gagaacttatgaaaaca 5886982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 624
Target Start/End: Complemental strand, 8382457 - 8382416
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacag 624  Q
    ||||||| |||| ||||| |||||||||||||||||||||||    
T  8382457 ataagcatttgtgagactctttgagagaacttatgaaaacag 8382416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 716
Target Start/End: Complemental strand, 23445366 - 23445317
Alignment:
Q  667 gctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat 716  Q
    |||||||| |||||||||||||||||| ||||   |||||||||||||||    
T  23445366 gctctccaagatagcttatgaaaacaacttatggcttatacaaaaacaat 23445317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 698
Target Start/End: Original strand, 26779941 - 26779994
Alignment:
Q  645 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||||| |||| ||||||||||| ||| || |||||||||||||||||| ||||    
T  26779941 tgttttcaacttattttcataagttcttcaagatagcttatgaaaacaacttat 26779994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 693
Target Start/End: Complemental strand, 30257754 - 30257689
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    ||||||||||||||  ||||||| | || ||||  |||||| ||||||||||| ||||||||||||    
T  30257754 atgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaa 30257689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 752
Target Start/End: Original strand, 33185927 - 33186082
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagtta 697  Q
    |||||||||||||  |||||||||||  | ||||||| | |||| |||||||| |||| |||| ||| |  |||| |||||||||||| ||||||| |||    
T  33185927 actgtttgagagagtttatgaaaacaaattatgacatttccataacctgttttcaacttatttacat-atatctctaggatagcttataaaaacaactta 33186025  T
Q  698 tttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttat 752  Q
    |   || || |||||||||  ||| | ||||||| || ||| ||| |||||||||||    
T  33186026 taacttgtataaaaacaattcgaccttattttatcttctgtaatagaaatagcttat 33186082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 766
Target Start/End: Original strand, 33527178 - 33527286
Alignment:
Q  660 ttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccata 757  Q
    |||||||| |||| |||||| ||||||||||||  ||||  ||||||  |||||| |  ||||  ||||||| || |||| || ||||||||||| ||||    
T  33527178 ttcataagatctcgaggataacttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcata 33527277  T
Q  758 agcgcttat 766  Q
    |||||||||    
T  33527278 agcgcttat 33527286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 588 - 641
Target Start/End: Original strand, 38170649 - 38170702
Alignment:
Q  588 cacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    ||||||| |||||| ||| |||| ||||||||||||| | ||||||||||||||    
T  38170649 cacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcata 38170702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 692
Target Start/End: Original strand, 39270403 - 39270488
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||| ||||||||||||| |  || ||||| ||||  ||||||| |||| ||||||||| |||||| | | |||||||||||||||    
T  39270403 gagagcttatgaaaacagcttttggcatgtccataagctgttttcaacttattttcatatgctctctatggtagcttatgaaaaca 39270488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 636
Target Start/End: Complemental strand, 42336731 - 42336678
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 636  Q
    ||||||||||||  |||||||||||| ||||||||||||||  | |||||||||    
T  42336731 ataagcacttgtgcgactgtttgagataacttatgaaaacaacttatgacatgt 42336678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 773
Target Start/End: Original strand, 44031953 - 44032145
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||||||||||| |  |||| |||||| || ||| | ||||||||| ||||  || |||| | || |||| |||||||||| || |||| ||    
T  44031953 ataagcacttgttagactgtctaggagagcttatgtaagcagctaatgacatgtccataagctattttcagctaatttccataagctcttcaagataact 44032052  T
Q  683 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    || ||||| |  ||||   |||||  |||||||  |||||| ||||||  || ||||||| |||  |||||| ||||| | ||||||||||||    
T  44032053 taagaaaatagtttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgataa 44032145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 52286657 - 52286600
Alignment:
Q  718 acttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagc 775  Q
    |||| ||||||| || |||| || ||||| ||||| ||||||||||||||||||||||    
T  52286657 actttattttatcttttgttgtagaaatatcttattcataagcgcttatatgataagc 52286600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 1e-19; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 578 - 760
Target Start/End: Complemental strand, 39622072 - 39621890
Alignment:
Q  578 cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccagga 677  Q
    ||||||||||||||||  | ||||||||||||||||||||||||||  | ||||||  ||||||   |||||| | || |||| | ||||||   | |||    
T  39622072 cttgtataagcacttgcgacactgtttgagagaacttatgaaaacaacttatgacaaattcataaattgttttcagcttatttccttaagcttgtccgga 39621973  T
Q  678 tagcttatgaaaacaagttatttattatacaaaaacaatgacttaattttatgttgtgttataaaaatagcttatccataagc 760  Q
    || ||||||||||||  ||||  ||||||||||||   |||||| ||||||| |||||||||| ||||| ||||| |||||||    
T  39621972 taacttatgaaaacagcttatagattatacaaaaagtttgactttattttattttgtgttatagaaatatcttattcataagc 39621890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 583 - 693
Target Start/End: Original strand, 12313127 - 12313237
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| ||| |||||| ||||| |||||||||||| | ||| ||||||||||   || ||| | || |||||||||||||||||| |||||||    
T  12313127 ataagcacttgtgagattgtttgggagaatttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataagctctccaagatagct 12313226  T
Q  683 tatgaaaacaa 693  Q
    |||| ||||||    
T  12313227 tatgtaaacaa 12313237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 610 - 716
Target Start/End: Complemental strand, 33941998 - 33941892
Alignment:
Q  610 aacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaa 709  Q
    ||||||||||||||  | |||||| |||||||  ||| ||| |||| ||| |||||| ||||||| |||||||||||||||||||||||   ||||||||    
T  33941998 aacttatgaaaacaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttatacaa 33941899  T
Q  710 aaacaat 716  Q
    |||||||    
T  33941898 aaacaat 33941892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 583 - 752
Target Start/End: Complemental strand, 787448 - 787276
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| | |||||||| |||||||||||||||||| | ||||||||| ||||  ||||||| | || || | ||||| |  || | ||||| |    
T  787448 ataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgttttcagcttatctccataaaccatctaagatagtt 787349  T
Q  683 tatg-aaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttat 752  Q
    |||| ||||||  ||||  ||| |||||||||||  |||||| ||||||| |||||||||| |||||||||||    
T  787348 tatgaaaaacagattatagattttacaaaaacaagttgactttattttatcttgtgttatagaaatagcttat 787276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 596 - 689
Target Start/End: Complemental strand, 33192304 - 33192212
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    ||||||||||| ||||||||||||||||||| ||||||| | ||||  ||||||| | || || || |||||||||||||||||||||||||||    
T  33192304 agactgtttga-agaacttatgaaaacagtttatgacatatccataagctgttttcagcttatatttataagctctccaggatagcttatgaaa 33192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 583 - 698
Target Start/End: Complemental strand, 35486033 - 35485918
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||| |||||| ||||||||||||||||||||  ||| ||  | |||| |||||||||  ||||||| | ||||||| |||| ||||| ||||||||||    
T  35486033 ataagaacttgtgagactgtttgagagaacttactaaagcaacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagct 35485934  T
Q  683 tatgaaaacaagttat 698  Q
    ||| ||||||| ||||    
T  35485933 tataaaaacaacttat 35485918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 583 - 714
Target Start/End: Complemental strand, 40158834 - 40158703
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||| |||||| |||||| ||| | |||||||||||||||| | |||||||||| |||   |||||| | || | || |||||||||||||| ||| ||    
T  40158834 ataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataact 40158735  T
Q  683 tatgaaaacaagttatttattatacaaaaaca 714  Q
    ||||||||||| |||||  |||||| ||||||    
T  40158734 tatgaaaacaacttattgcttatacgaaaaca 40158703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 583 - 693
Target Start/End: Original strand, 38078364 - 38078474
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    ||||||||| || ||||| | ||||||| |||||| ||| |||| | | ||||||||||   |||||| | ||||||| ||||||||||||| |||||||    
T  38078364 ataagcactggtgagactatctgagagagcttatggaaatagttaaaggcatgttcataagttgttttgagctcatttacataagctctccaagatagct 38078463  T
Q  683 tatgaaaacaa 693  Q
    |||||||||||    
T  38078464 tatgaaaacaa 38078474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 692
Target Start/End: Original strand, 35378994 - 35379079
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||| ||||||||||||| | ||||| ||||||||   |||||| | || |||||||||||||||||| |||||||||||||||||    
T  35378994 gagagcttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 607 - 714
Target Start/End: Complemental strand, 42420089 - 42419982
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattata 706  Q
    ||||||||| ||||| || | ||| ||||||||||   |||||| | ||||||| |||||||| |||||||||||||||||||| |  ||||  ||||||    
T  42420089 gagaacttaggaaaaaagcttatgtcatgttcataaattgttttcagctcatttccataagctatccaggatagcttatgaaaatagcttatagattata 42419990  T
Q  707 caaaaaca 714  Q
    ||||||||    
T  42419989 caaaaaca 42419982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 591 - 716
Target Start/End: Complemental strand, 1626009 - 1625883
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||| ||||| |||||||||||||||||||  || | |||||| ||||||||   |||||| | || |||||| |||| |||||| ||||||||||||||    
T  1626009 ttgtaagactatttgagagaacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaa 1625910  T
Q  690 acaagttatttattatacaaaaacaat 716  Q
    |||| ||||   |||||| ||||||||    
T  1625909 acaacttataacttatacgaaaacaat 1625883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 599 - 693
Target Start/End: Complemental strand, 15120283 - 15120189
Alignment:
Q  599 ctgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    ||||||| |||| |||||| |||||  | |||||||||||||   ||||||||| || ||||| |||||||||||| ||||||||| ||||||||    
T  15120283 ctgtttgggagagcttatggaaacaacttatgacatgttcattagctgttttaagcttattttgataagctctccatgatagcttacgaaaacaa 15120189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 644 - 759
Target Start/End: Complemental strand, 43259889 - 43259772
Alignment:
Q  644 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataa 741  Q
    ||||||| | || |||| |||||||||| || |||| || |||||||||  || || ||||||||||||| ||  ||||| ||||||| ||||||||||     
T  43259889 ctgtttttagcttatttccataagctcttcaagatacctaatgaaaacagcttgttgattatacaaaaactatttgactttattttatcttgtgttatag 43259790  T
Q  742 aaatagcttatccataag 759  Q
    ||||||||||||| ||||    
T  43259789 aaatagcttatccgtaag 43259772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 1939331 - 1939395
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||| ||||  ||||||| |||| |||| |||||||||||||| ||||||||||||||||    
T  1939331 atgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaaca 1939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 583 - 650
Target Start/End: Original strand, 5902503 - 5902570
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgtttt 650  Q
    |||| ||||||| ||||||||||  ||||||||||||||||| | ||||||||||||||  |||||||    
T  5902503 ataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcataaactgtttt 5902570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 662 - 766
Target Start/End: Complemental strand, 10143209 - 10143103
Alignment:
Q  662 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataag 759  Q
    ||||| ||||||| ||||||||||||||| || ||||   ||||| ||||||| |  ||||||||||||| || ||||||| ||||| ||||| ||||||    
T  10143209 cataaactctccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataag 10143110  T
Q  760 cgcttat 766  Q
    | |||||    
T  10143109 cacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 549 - 678
Target Start/End: Original strand, 43529776 - 43529907
Alignment:
Q  549 ctgtttggattgacttatttgaggctat-tcttg-tataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctg 646  Q
    ||||||| |||||||||||||||  ||| | ||| ||||||||||| | | |||||||| ||||| |||||||||||| | ||| ||||||||||  ||     
T  43529776 ctgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataagcta 43529875  T
Q  647 ttttaaactcattttcataagctctccaggat 678  Q
    |||| |  | |||||||||||||||| |||||    
T  43529876 ttttcagtttattttcataagctctctaggat 43529907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 641
Target Start/End: Complemental strand, 1801784 - 1801726
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    |||||||||||| | | |||||| |||||||||||||||||| | ||||||||||||||    
T  1801784 ataagcacttgtgatattgtttgggagaacttatgaaaacagcttatgacatgttcata 1801726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 641
Target Start/End: Complemental strand, 4350806 - 4350748
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    ||||||||||   ||| ||||||||||||||||||||||||| | ||||||||||||||    
T  4350806 ataagcacttaagagattgtttgagagaacttatgaaaacagcttatgacatgttcata 4350748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 698
Target Start/End: Complemental strand, 9477999 - 9477953
Alignment:
Q  652 aactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||    
T  9477999 aacttattttcataacctctccaggatagcttatgaaaacaacttat 9477953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 690
Target Start/End: Original strand, 34652035 - 34652097
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    ||||||||| ||||  ||||||| |||| |||| ||||||||||||| |||||||||||||||    
T  34652035 atgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 698
Target Start/End: Original strand, 36863648 - 36863694
Alignment:
Q  652 aactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||    
T  36863648 aacttattttcataagctctccaagatagcttatgaaaacaatttat 36863694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 774
Target Start/End: Complemental strand, 11514012 - 11513824
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| ||||||||| ||||| |||||||||||||  |||| ||||   |||  || |||| | || |||| || ||| |||||| |||||||    
T  11514012 ataagcacttgtgagactgttttagagagcttatgaaaacag--catggcatgcctataagctattttcagcttatttccaaaagttctccatgatagct 11513915  T
Q  683 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 774  Q
    ||||||||||| ||||   |||||  |||||||  |||||| ||||||| || |||| |   |||| ||||| ||||| | |||||||||||||    
T  11513914 tatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgttgt---aataacttatacataaacccttatatgataag 11513824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 667
Target Start/End: Complemental strand, 13220534 - 13220465
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataag 667  Q
    ||||||||||||||||||| ||||||  | ||||| ||||||||  |||||||||||| |||| ||||||    
T  13220534 actgtttgagagaacttataaaaacaacttatgacttgttcataagctgttttaaacttatttgcataag 13220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 692
Target Start/End: Complemental strand, 16867854 - 16867746
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| | ||||||| ||||| |||| |||   |||| ||||||| ||||||   |||||| |||| |||| ||||||||||||| |||||||    
T  16867854 ataagcacttgtgacactgttttagagagcttaagaagt-agtttatgacatattcataagttgttttcaacttatttccataagctctccaagatagct 16867756  T
Q  683 tatgaaaaca 692  Q
    | ||||||||    
T  16867755 tgtgaaaaca 16867746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 596 - 689
Target Start/End: Original strand, 32106766 - 32106859
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||||||||| |||||||||||||||||| | ||||||| |   ||  ||||||| || | || |||||||||||| ||||||| |||||||||    
T  32106766 agactgtttgtgagaacttatgaaaacagcttatgacatatctgtaagctgttttcaaattatgttcataagctcttcaggataacttatgaaa 32106859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 691
Target Start/End: Complemental strand, 33256837 - 33256748
Alignment:
Q  602 tttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaac 691  Q
    |||| |||| ||||||||||||| | ||||||||||||||  ||||| | | || ||||||||| | ||| |||||| ||||||||||||    
T  33256837 tttgggagagcttatgaaaacagcttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaac 33256748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 677
Target Start/End: Complemental strand, 38809425 - 38809348
Alignment:
Q  600 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccagga 677  Q
    |||||| |||||||||| ||| ||| | |||||||||| |||  ||||||| |||| |||| ||||||||||||||||    
T  38809425 tgtttgggagaacttattaaaccagcttatgacatgttaataatctgttttcaacttatttccataagctctccagga 38809348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 657 - 698
Target Start/End: Complemental strand, 39983384 - 39983343
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  39983384 attttcattagctctccaggatagcttatgaaaacaacttat 39983343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 644 - 757
Target Start/End: Complemental strand, 4090404 - 4090289
Alignment:
Q  644 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataa 741  Q
    ||||||| |||  |||| ||| |||||||  |||||||||||| |||||| ||||  |||||||  |||||||  ||||| ||||||| |||||||||      
T  4090404 ctgttttcaacatatttccatgagctctcagggatagcttatgtaaacaacttatagattataccgaaacaatttgactttattttatcttgtgttatgg 4090305  T
Q  742 aaatagcttatccata 757  Q
    ||||||||||| ||||    
T  4090304 aaatagcttattcata 4090289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 692
Target Start/End: Original strand, 10884544 - 10884584
Alignment:
Q  652 aactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  10884544 aacttattttcataagctctctaggatagcttatgaaaaca 10884584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 591 - 698
Target Start/End: Complemental strand, 20952464 - 20952356
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgac-atgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||||||||| ||| ||||||||||||||||||||| ||| | || |||||   || |||| |||| ||||||||||| ||||||  |||||| || |||    
T  20952464 ttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttttttcaacttattttcataagttctccaatatagctaataaaa 20952365  T
Q  690 acaagttat 698  Q
    |||| ||||    
T  20952364 acaacttat 20952356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 657 - 693
Target Start/End: Complemental strand, 24097850 - 24097814
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaa 693  Q
    ||||||||||||||||||||||| |||||||||||||    
T  24097850 attttcataagctctccaggataacttatgaaaacaa 24097814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 674
Target Start/End: Original strand, 28677577 - 28677704
Alignment:
Q  549 ctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctg 646  Q
    ||||||||||||| || ||||||  ||||  |||| ||||| |||  | |||||||||| |||||||||||||||||| | ||||||| ||||||   ||    
T  28677577 ctgtttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagcttatgacattttcataagttg 28677676  T
Q  647 ttttaaactcattttcataagctctcca 674  Q
    ||||   || |||| |||||||||||||    
T  28677677 ttttcggcttatttccataagctctcca 28677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 599 - 768
Target Start/End: Complemental strand, 28933923 - 28933753
Alignment:
Q  599 ctgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||||||  ||| ||||||||||||  | ||| |||||||||| | |||||| |||| ||||  || ||||||| |||||||||||||||||||| ||||    
T  28933923 ctgtttggaagagcttatgaaaacaacttatggcatgttcatagc-tgttttcaacttatttctatcagctctctaggatagcttatgaaaacaatttat 28933825  T
Q  699 ttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatat 768  Q
       ||| |  |||| ||  ||| || ||||||| || ||||||| ||||||||||| ||| ||| |||||||    
T  28933824 aacttaaatgaaaataatttgatttgattttatcttttgttatataaatagcttatacatgagcacttatat 28933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 607 - 667
Target Start/End: Complemental strand, 31096393 - 31096333
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataag 667  Q
    |||| ||||||||||||||| || |||||| ||||  |||||||||||| |||||||||||    
T  31096393 gagagcttatgaaaacagttaataacatgtccataagctgttttaaacttattttcataag 31096333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 598 - 690
Target Start/End: Complemental strand, 41817269 - 41817177
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||||||  ||||| |||||||||||  | |||||||||| |||   |||||| | || |||| ||||||||||||||||||| |||||||||    
T  41817269 actgtttaggagaatttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagtttatgaaaa 41817177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 616 - 688
Target Start/End: Original strand, 44438826 - 44438898
Alignment:
Q  616 tgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 688  Q
    ||||||||| | |||||||||||||| |||||||| | || |||| || ||| ||||||||||| ||||||||    
T  44438826 tgaaaacagcttatgacatgttcataacctgttttcagcttatttccacaagatctccaggataacttatgaa 44438898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 689
Target Start/End: Complemental strand, 750779 - 750680
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||| ||| ||||||  |||||||||||||| || | ||||||| |||||||  ||||||| | || |||| |||||| |||||| ||||||||||||||    
T  750779 ttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagcttatttgcataagttctccaagatagcttatgaaa 750680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 1494415 - 1494506
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    ||||||||||||| ||||||||||||| | ||||||||| ||||  ||||||| | || ||||||| || ||| ||| ||| ||| ||||||    
T  1494415 actgtttgagagagcttatgaaaacagcttatgacatgtccataaactgtttttagcttattttcaaaacctcgccatgatggctaatgaaa 1494506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 692
Target Start/End: Complemental strand, 3050016 - 3049981
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||||||||| |||||||||||||||||    
T  3050016 attttcataagctctccatgatagcttatgaaaaca 3049981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 690
Target Start/End: Original strand, 9530758 - 9530789
Alignment:
Q  659 tttcataagctctccaggatagcttatgaaaa 690  Q
    ||||||||||||||||||||||||||||||||    
T  9530758 tttcataagctctccaggatagcttatgaaaa 9530789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 685
Target Start/End: Complemental strand, 25790211 - 25790140
Alignment:
Q  614 tatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    |||| |||||| | || |||||||| ||  ||||||| |||| |||||||||||||||||||||||| ||||    
T  25790211 tatggaaacagcttattacatgttcctaagctgttttgaacttattttcataagctctccaggatagattat 25790140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 624
Target Start/End: Complemental strand, 32837441 - 32837398
Alignment:
Q  581 gtataagcacttgttagactgtttgagagaacttatgaaaacag 624  Q
    ||||||| |||||| |||||||||| ||||||||||||||||||    
T  32837441 gtataagtacttgtgagactgtttgggagaacttatgaaaacag 32837398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 716
Target Start/End: Complemental strand, 40279239 - 40279180
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat 716  Q
    ||||||||||| ||||||  ||||||||||||||||| |||| | |||||| ||||||||    
T  40279239 attttcataagttctccaacatagcttatgaaaacaacttatatcttataccaaaacaat 40279180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 540 - 570
Target Start/End: Complemental strand, 4508342 - 4508312
Alignment:
Q  540 acttacgacctgtttggattgacttatttga 570  Q
    |||||||||||||||||||||||||||||||    
T  4508342 acttacgacctgtttggattgacttatttga 4508312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 774
Target Start/End: Original strand, 17952790 - 17952848
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 774  Q
    |||||| ||||||| || ||||||| |||||||||||  |||||| |||||||||||||    
T  17952790 tgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataag 17952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 698
Target Start/End: Complemental strand, 33942221 - 33942151
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    ||||||||||||||  ||||||| | || |||||||| ||||||| | ||| |||||||||||||| ||||    
T  33942221 atgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttat 33942151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 644 - 698
Target Start/End: Complemental strand, 40279462 - 40279408
Alignment:
Q  644 ctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    ||||||| |||| ||||||||||| ||||||  ||||||||||||||||| ||||    
T  40279462 ctgttttcaacttattttcataagttctccaatatagcttatgaaaacaacttat 40279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 658 - 759
Target Start/End: Original strand, 43299430 - 43299535
Alignment:
Q  658 ttttcataagctctccaggat-agcttatgaaaacaagttattta-ttatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatc 753  Q
    ||||||| ||||| ||||||| ||||||||||||||| ||||  | |||||||||||||   |||||| ||||||| || ||||||| |||||||| ||     
T  43299430 ttttcatgagctcaccaggattagcttatgaaaacaacttatagatttatacaaaaacagtttgactttattttatcttctgttatataaatagctaatt 43299529  T
Q  754 cataag 759  Q
    ||||||    
T  43299530 cataag 43299535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 607 - 688
Target Start/End: Complemental strand, 43570506 - 43570425
Alignment:
Q  607 gagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 688  Q
    |||||||||||||||||| | ||||||| |||||||  || |||||  || ||||||||||||| |||||||| |||||||||    
T  43570506 gagaacttatgaaaacagcttatgacattgttcataagcttttttag-cttattttcataagctttccaggatggcttatgaa 43570425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 613 - 690
Target Start/End: Complemental strand, 680589 - 680512
Alignment:
Q  613 ttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||||||||||| | |||||||||| |||  ||||||| | || ||||||| ||| ||| || |||||||||||||||    
T  680589 ttatgaaaacagcttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaa 680512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 636
Target Start/End: Complemental strand, 1318352 - 1318299
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgt 636  Q
    |||||||||||| |||||||||| |||| ||||||||||||  | |||||||||    
T  1318352 ataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgt 1318299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 685
Target Start/End: Complemental strand, 1647327 - 1647250
Alignment:
Q  608 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    ||||||||||||||||| | |||||||| |||||  ||||||| | || |||| ||||||||||| |  |||||||||    
T  1647327 agaacttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctctctataatagcttat 1647250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 716 - 773
Target Start/End: Complemental strand, 3102674 - 3102617
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    |||||| ||||||| || || |||||||||||||||| |||||||  |||||||||||    
T  3102674 tgactttattttatattttgctataaaaatagcttatacataagcagttatatgataa 3102617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 692
Target Start/End: Complemental strand, 9556331 - 9556246
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||| ||||||||||||  | ||||||||| ||||    | ||| |||| ||||||||||||| || |||||||||||||||||||    
T  9556331 gagagcttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggatagcttatgaaaaca 9556246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 773
Target Start/End: Original strand, 26484193 - 26484230
Alignment:
Q  736 ttataaaaatagcttatccataagcgcttatatgataa 773  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  26484193 ttatagaaatagcttatccataagcacttatatgataa 26484230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 767
Target Start/End: Original strand, 33931618 - 33931710
Alignment:
Q  677 atagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataagcgcttata 767  Q
    ||||||||||||||||  ||||   |||||||||||||||  ||| | ||||||| | |||| ||| ||||||||||| || |||||||||||    
T  33931618 atagcttatgaaaacagcttatagcttatacaaaaacaatctgaccttattttatctagtgtaatagaaatagcttattcacaagcgcttata 33931710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 607 - 692
Target Start/End: Original strand, 35378510 - 35378595
Alignment:
Q  607 gagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||||||||| | ||||| ||||||||   | |||| | || ||||||||||||| |||| ||| ||||| |||||||    
T  35378510 gagaacttatgaaaacagctgatgacttgttcataagttattttcagcttattttcataagctatccaagattgcttacgaaaaca 35378595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 693
Target Start/End: Complemental strand, 43173301 - 43173228
Alignment:
Q  620 aacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    ||||||| ||||||||| || |  |||||||||||| |||| |||||| |||||| |||||| ||| |||||||    
T  43173301 aacagtttatgacatgtccacatgctgttttaaacttatttccataagatctccaagatagcctataaaaacaa 43173228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 752
Target Start/End: Original strand, 43279488 - 43279652
Alignment:
Q  591 ttgttagactgtttg--agagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatga 687  Q
    |||| ||||||||||  |||||| |||||||||||| | |||||| | ||||||  || |||| |||| ||||||| ||| ||||||  ||||||||| |    
T  43279488 ttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcacaagttctccaatatagcttataa 43279587  T
Q  688 aaacaagttatttattatacaaaaacaatg--acttaattttatgttgtgttataaaaatagcttat 752  Q
    |||||| ||||  |  |||||||||||||   || | ||||||| || || ||||||||||||||||    
T  43279588 aaacaacttat--agcatacaaaaacaatttcacattattttatcttttgatataaaaatagcttat 43279652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 716 - 773
Target Start/End: Original strand, 43530200 - 43530257
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    |||||| ||||||| ||||  |||| ||||||||||| |||||| |||||||||||||    
T  43530200 tgactttattttatcttgtcctatagaaatagcttattcataagtgcttatatgataa 43530257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 698
Target Start/End: Original strand, 43985031 - 43985072
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    ||||||||||||||| || |||||||||||||||||| ||||    
T  43985031 attttcataagctcttcaagatagcttatgaaaacaacttat 43985072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 4e-19; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 586 - 752
Target Start/End: Complemental strand, 33887943 - 33887775
Alignment:
Q  586 agcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    ||||||||| | | |||||||||||| ||||||||| || | |||||||||||| |   |||||| |||| |||| |||||||  | |||||||||||||    
T  33887943 agcacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttat 33887844  T
Q  686 gaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttat 752  Q
    |||||||  ||||| ||||||| ||||||   ||| ||  |||||| |||||||||||||||| |||||    
T  33887843 gaaaacagtttattgattatactaaaacagtttgagtttgttttatcttgtgttataaaaatatcttat 33887775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 591 - 716
Target Start/End: Original strand, 20368142 - 20368267
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||| ||||| |||| |||||||||||||||||  | ||||||||||||||  ||  ||| |||| ||||||||||| |||||| || ||||||||||||    
T  20368142 ttgtaagactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaa 20368241  T
Q  691 caagttatttattatacaaaaacaat 716  Q
    ||| ||||   | |||||||||||||    
T  20368242 caacttataactcatacaaaaacaat 20368267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 608 - 692
Target Start/End: Complemental strand, 31624181 - 31624097
Alignment:
Q  608 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||||| | ||||||||||||||  ||||||| |||| ||||||||||  |||||| |||||| ||||||||||    
T  31624181 agaacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaaca 31624097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 749
Target Start/End: Original strand, 31776303 - 31776396
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagct 749  Q
    |||| ||| |||||||||  ||||||||||||||||| ||||| |||||||||||||||  |||||| ||||||| |||||||||| ||||||||    
T  31776303 atttccattagctctccattatagcttatgaaaacaacttattaattatacaaaaacaatttgactttattttat-ttgtgttatagaaatagct 31776396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 602 - 774
Target Start/End: Original strand, 9093528 - 9093704
Alignment:
Q  602 tttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttattt 700  Q
    |||| |||| |||||||||| || | ||||||| ||| ||| |||||||| | || |||||| |||| |||| | || ||||||||||||||  ||||      
T  9093528 tttgtgagagcttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatag 9093627  T
Q  701 attatacaaaaacaatg--acttaattttatgttgtgttataaaaatagcttatccataagcgcttat-atgataag 774  Q
     |||||| ||||||||   |||| ||||||| || || |||| ||||||||||||||||||||||||| ||||||||    
T  9093628 cttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataagcgcttatcatgataag 9093704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 715
Target Start/End: Original strand, 31812041 - 31812099
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa 715  Q
    |||||||||||||||||| |||||||||||||||||| |||| | |||||||| |||||    
T  31812041 attttcataagctctccaagatagcttatgaaaacaacttatatcttatacaataacaa 31812099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 717 - 766
Target Start/End: Original strand, 3171521 - 3171570
Alignment:
Q  717 gacttaattttatgttgtgttataaaaatagcttatccataagcgcttat 766  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  3171521 gacttaattttatcttttgttataaaaatagcttatgcataagcgcttat 3171570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 596 - 693
Target Start/End: Original strand, 8035115 - 8035212
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    ||||| |||| ||||||||| |||||||  | |||||||| ||||| | |||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  8035115 agactatttgggagaacttaagaaaacaacttatgacatggtcataacttgttttcaacttattttcgtaagctttctaggataacttatgaaaacaa 8035212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 587 - 692
Target Start/End: Original strand, 31686321 - 31686426
Alignment:
Q  587 gcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatg 686  Q
    |||||||| | | ||||||||||||||||| ||||||  | |||||| ||| |||  ||||||| | || || | | |||||||||||||||||||||||    
T  31686321 gcacttgtgacattgtttgagagaacttatcaaaacaacttatgacaagtttataatctgttttcagcttatgtccgtaagctctccaggatagcttatg 31686420  T
Q  687 aaaaca 692  Q
    ||||||    
T  31686421 aaaaca 31686426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 583 - 692
Target Start/End: Original strand, 32171337 - 32171446
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||  ||||||||||||||| ||||||||||||| | |||||| || || |  || |||| | || |||| |||||||| ||||||||| ||    
T  32171337 ataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagctatccaggataact 32171436  T
Q  683 tatgaaaaca 692  Q
     |||||||||    
T  32171437 aatgaaaaca 32171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 591 - 692
Target Start/End: Complemental strand, 33089614 - 33089513
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||| ||||| ||| ||||||||||||||||||| | | |||||||| |||   |||||||  || ||||||||| |||| ||| |||||||||||||||    
T  33089614 ttgtgagactatttcagagaacttatgaaaacagcttaggacatgtttataagttgttttacgcttattttcataggctccccaagatagcttatgaaaa 33089515  T
Q  691 ca 692  Q
    ||    
T  33089514 ca 33089513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 657 - 766
Target Start/End: Complemental strand, 4006756 - 4006645
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatcc 754  Q
    |||||||||| |||||  ||||||||||||||||||| ||||   ||||| ||||||||  |||||| |||||||  | ||||||| ||||| ||||| |    
T  4006756 attttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgc 4006657  T
Q  755 ataagcgcttat 766  Q
    |||||| |||||    
T  4006656 ataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 662 - 775
Target Start/End: Complemental strand, 4248995 - 4248880
Alignment:
Q  662 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataag 759  Q
    ||||||||||||  ||||||||| |||||||  |||||  |||||||||| ||||  ||||| ||||||| || ||||||  |||||||||||  |||||    
T  4248995 cataagctctccgagatagcttaggaaaacaccttattgtttatacaaaatcaatttgactttattttatcttttgttattgaaatagcttatatataag 4248896  T
Q  760 cgcttatatgataagc 775  Q
    | ||||||||| ||||    
T  4248895 cacttatatgacaagc 4248880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 6647458 - 6647394
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||   |||||| |||| |||||||||||||||| | |||||||||||||||||    
T  6647458 atgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaaca 6647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 713
Target Start/End: Original strand, 7945900 - 7945967
Alignment:
Q  645 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaac 713  Q
    |||||||| || |||| |||||||||||||||||||| |||||||||| |||||  |||||||||||||    
T  7945900 tgttttaagcttatttccataagctctccaggatagc-tatgaaaacaggttatagattatacaaaaac 7945967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 721 - 773
Target Start/End: Original strand, 31668779 - 31668831
Alignment:
Q  721 taattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    |||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||    
T  31668779 taattttatgttttgttatagaaatagcttatacataagcacttatatgataa 31668831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 693
Target Start/End: Complemental strand, 103530 - 103437
Alignment:
Q  600 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    |||| |||||||||||  ||||||| | ||||||| ||||||  ||||||  | ||  ||||||| || |||||||||||||||||||||||||    
T  103530 tgttcgagagaacttacaaaaacagcttatgacatattcataaactgtttacagcttgttttcattagatctccaggatagcttatgaaaacaa 103437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 692
Target Start/End: Complemental strand, 34403971 - 34403862
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||| |||||||||||||||||  ||||| ||| |||||||  | ||||||||||||||   |||||| | || |||| ||||||||||  || | ||||    
T  34403971 ataaacacttgttagactgtttaggagaagttaagaaaacaacttatgacatgttcataaggtgttttcaccttatttccataagctctttagtacagct 34403872  T
Q  683 tatgaaaaca 692  Q
    ||||||||||    
T  34403871 tatgaaaaca 34403862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 598 - 690
Target Start/End: Complemental strand, 2263293 - 2263201
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    ||||||||||||||||||||||||||    |||||||||||||| | |||||| ||||  |||  ||||| |||| | |||||||||| ||||    
T  2263293 actgtttgagagaacttatgaaaacaacatatgacatgttcatagcgtgttttcaacttctttctataaggtctcgaagatagcttataaaaa 2263201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 596 - 752
Target Start/End: Complemental strand, 2735173 - 2735014
Alignment:
Q  596 agactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaag 694  Q
    ||||||||||||| ||||||||||||| | | |||||| | ||||||  |||||||   || ||||||||||| | | || ||| |||||||||||||      
T  2735173 agactgtttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagc 2735074  T
Q  695 ttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttat 752  Q
    ||||  |||||||||||| ||  | |||| ||||||| || ||||||| | |||||||||    
T  2735073 ttatagattatacaaaaataatttaactttattttatcttttgttatagacatagcttat 2735014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 692
Target Start/End: Original strand, 28641732 - 28641812
Alignment:
Q  612 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||| | || |||||||||||  ||||||| | || ||||||||||||||| ||| ||||||  ||||||||    
T  28641732 cttatgaaaacagcttataacatgttcataagctgtttttagcttattttcataagctctgcagaatagctattgaaaaca 28641812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 581 - 693
Target Start/End: Original strand, 32386515 - 32386627
Alignment:
Q  581 gtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatag 680  Q
    ||||||| |||||| |||| |||||| ||| |||||| ||| |  | || |||||| || | | |||||| | || |||||||||||||||||||||||     
T  32386515 gtataagtacttgtgagaccgtttgaaagagcttatggaaatatcttataacatgtccacaacttgttttcagcttattttcataagctctccaggataa 32386614  T
Q  681 cttatgaaaacaa 693  Q
    || ||||||||||    
T  32386615 ctaatgaaaacaa 32386627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 692
Target Start/End: Complemental strand, 769256 - 769146
Alignment:
Q  581 gtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatag 680  Q
    |||||| ||||||| ||||||||||   |||||||||||||||  | ||||||||||||||  ||||||| |||| | |||| |||| ||  || | |||    
T  769256 gtataaacacttgtgagactgtttggatgaacttatgaaaacatcttatgacatgttcataagctgttttcaacttactttcttaag-tcctcaagttag 769158  T
Q  681 cttatgaaaaca 692  Q
    ||||||||||||    
T  769157 cttatgaaaaca 769146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 718 - 769
Target Start/End: Complemental strand, 32861407 - 32861356
Alignment:
Q  718 acttaattttatgttgtgttataaaaatagcttatccataagcgcttatatg 769  Q
    |||||||||||| || ||||||| ||||||| ||||||||||| ||||||||    
T  32861407 acttaattttatcttttgttatagaaatagcgtatccataagcacttatatg 32861356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 608 - 666
Target Start/End: Complemental strand, 1575986 - 1575928
Alignment:
Q  608 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataa 666  Q
    ||||||||||||||||  | ||||||||||||||  ||||||| |||| ||||||||||    
T  1575986 agaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 692
Target Start/End: Complemental strand, 4246483 - 4246417
Alignment:
Q  626 tcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||| ||||  ||||||| |||| ||||| ||| ||||||||  ||||||||||||||||    
T  4246483 tcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaaca 4246417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 598 - 692
Target Start/End: Original strand, 4324423 - 4324516
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||||||| ||||||  | ||||||||| | ||  ||| ||| | || |||| |||||| | ||||||||||||||||||||||    
T  4324423 actgtttgagagaacttat-aaaacaacttatgacatgtccctaaactgcttttagcttatttgcataagttttccaggatagcttatgaaaaca 4324516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 690
Target Start/End: Complemental strand, 4420714 - 4420652
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    ||||||||||||||  ||||||| | || |||| ||||||||||||| ||||||||| |||||    
T  4420714 atgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaa 4420652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 591 - 641
Target Start/End: Original strand, 9202952 - 9203002
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    |||| |||||||||||||||||||||||||| |  ||||| ||||||||||    
T  9202952 ttgtgagactgtttgagagaacttatgaaaataactcatggcatgttcata 9203002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 715 - 769
Target Start/End: Complemental strand, 33259798 - 33259744
Alignment:
Q  715 atgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatg 769  Q
    ||||||| | ||||| || ||||||||||||||||||| ||||||| ||||||||    
T  33259798 atgacttcaatttatcttttgttataaaaatagcttatacataagcacttatatg 33259744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 674 - 779
Target Start/End: Original strand, 33826780 - 33826884
Alignment:
Q  674 aggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgat 771  Q
    |||||| ||||| |||||   |||| ||||||||||||||| |  ||||| |||| || || ||||||| |||||||||||   | ||||||||||||||    
T  33826780 aggataacttataaaaactgcttatatattatacaaaaacagtttgactttatttaatcttctgttatataaatagcttat---ttagcgcttatatgat 33826876  T
Q  772 aagcactt 779  Q
    ||||||||    
T  33826877 aagcactt 33826884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 716 - 773
Target Start/End: Original strand, 3217279 - 3217336
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    |||||| ||||||| || | ||| ||||||||||||| ||||||| ||||||||||||    
T  3217279 tgactttattttatcttctcttacaaaaatagcttatacataagcacttatatgataa 3217336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 662 - 768
Target Start/End: Complemental strand, 6654652 - 6654544
Alignment:
Q  662 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataag 759  Q
    ||||||||||||| |||||| ||| ||||||  |||    ||| |||||||||||  |||||||||||||  | ||||||| ||||| ||||| ||||||    
T  6654652 cataagctctccaagatagcatattaaaacagcttaaagtttaaacaaaaacaatttgacttaattttattatttgttatagaaataacttatacataag 6654553  T
Q  760 cgcttatat 768  Q
    | |||||||    
T  6654552 cccttatat 6654544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 632
Target Start/End: Original strand, 10353715 - 10353764
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgac 632  Q
    |||||||||||| |||||||||| |||| ||| ||||||||||| |||||    
T  10353715 ataagcacttgtgagactgtttgggagagcttgtgaaaacagtttatgac 10353764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 692
Target Start/End: Complemental strand, 33116696 - 33116591
Alignment:
Q  587 gcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatg 686  Q
    |||||||| |||||||||||| ||| |||||||||||  | ||||||||| ||||  || ||||||  | |||| ||||||||    |||| ||||||||    
T  33116696 gcacttgtgagactgtttgagggaatttatgaaaacaacttatgacatgtgcataaactcttttaagtttatttccataagcttgttaggaaagcttatg 33116597  T
Q  687 aaaaca 692  Q
    ||||||    
T  33116596 aaaaca 33116591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 672
Target Start/End: Original strand, 35070421 - 35070510
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctc 672  Q
    ||||||||||||  ||||||||| ||||||  |||||||||| | | | || | |||||  ||||||| |||| ||||||||||||||||    
T  35070421 ataagcacttgtgggactgtttgggagaacaaatgaaaacagcttaaggcaagatcataagctgttttcaacttattttcataagctctc 35070510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 662 - 779
Target Start/End: Original strand, 912681 - 912801
Alignment:
Q  662 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat---gacttaattttatgttgtgttataaaaatagcttatccataa 758  Q
    |||||||| |||| ||||| |||| ||||||| |||||  |||||  ||||||||   ||||| ||||||| |||||||||| ||||| ||||| |||||    
T  912681 cataagctttccaagatagtttataaaaacaacttattgcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttattcataa 912780  T
Q  759 gcgcttatatgataagcactt 779  Q
     ||||||||||||||||||||    
T  912781 acgcttatatgataagcactt 912801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 605 - 752
Target Start/End: Complemental strand, 17368770 - 17368621
Alignment:
Q  605 gagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttatta 704  Q
    |||||||||||||||||||  | ||||||||||||||  | ||||| | || |||| ||||| ||||||| |||||||||||||||||| ||||  ||||    
T  17368770 gagagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatagatta 17368671  T
Q  705 tacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttat 752  Q
     |||||||||   |||||| |||| ||  ||||||||  |||||||||||    
T  17368670 cacaaaaacagtttgacttcatttaatactgtgttattgaaatagcttat 17368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 602 - 779
Target Start/End: Complemental strand, 39105562 - 39105381
Alignment:
Q  602 tttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttattt 700  Q
    |||| ||||| |||||||||||| | ||||||| |||||||  || |||| | || ||||||||||| |||||| |||||||||||||||||  ||||      
T  39105562 tttgggagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatag 39105463  T
Q  701 attatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttat-atgataagcactt 779  Q
     |||||| |||||||  | |||| |||| || ||  | |||| ||||||||||| ||||||||||||| |||||||||||||    
T  39105462 cttatacgaaaacaatttaacttcatttcatatttagctatagaaatagcttatacataagcgcttatcatgataagcactt 39105381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 583 - 692
Target Start/End: Original strand, 17258837 - 17258946
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| | | | |||| |||||| |||||||| || | ||||||||||||||  ||||||| | || ||||||||||||||| |||||||| |    
T  17258837 ataagcacttgtgacattctttgggagaacctatgaaaatagcttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtt 17258936  T
Q  683 tatgaaaaca 692  Q
    ||||||||||    
T  17258937 tatgaaaaca 17258946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 659 - 779
Target Start/End: Original strand, 18543226 - 18543349
Alignment:
Q  659 tttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa---tgacttaattttatgttgtgttataaaaatagcttatcca 755  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||   |||||| |||| || || ||| ||| ||||||||| | |     
T  18543226 tttcataagctctccaggatagcttatgaaaacaacttatatcttatataaaaacaagtttgactttatttaatattttgtgatacaaatagcttttacg 18543325  T
Q  756 taagcgcttatatgataagcactt 779  Q
    ||||| | ||||||||||| ||||    
T  18543326 taagcccctatatgataagtactt 18543349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 608 - 758
Target Start/End: Original strand, 18857377 - 18857531
Alignment:
Q  608 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcata--agctctccaggatagcttatgaaaacaagttatttattat 705  Q
    |||| |||||||||||| | ||||||||||||||  ||||||| |||| | |||||||  | ||||||| || ||||||||||||||  ||||  |||||    
T  18857377 agaatttatgaaaacagctaatgacatgttcataagctgtttttaacttaatttcataacacctctccaagacagcttatgaaaacagcttatagattat 18857476  T
Q  706 acaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataa 758  Q
    | ||||||||  |||||| |||||||  ||||||||  ||||||||||| |||||    
T  18857477 agaaaaacaatttgactttattttatcgtgtgttattgaaatagcttattcataa 18857531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 589 - 693
Target Start/End: Original strand, 37611175 - 37611279
Alignment:
Q  589 acttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 688  Q
    |||||| ||| ||||||||||| ||||||||||||  |  |||||||||||||  ||||||| |  | |||| ||||||||||||| |||||||||||||    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaa 37611274  T
Q  689 aacaa 693  Q
    |||||    
T  37611275 aacaa 37611279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 589 - 693
Target Start/End: Original strand, 37787905 - 37788009
Alignment:
Q  589 acttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 688  Q
    |||||| ||| ||||||||||| ||||||||||||  |  |||||||||||||  ||||||| |  | |||| ||||||||||||| |||||||||||||    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaa 37788004  T
Q  689 aacaa 693  Q
    |||||    
T  37788005 aacaa 37788009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 692
Target Start/End: Original strand, 13604825 - 13604912
Alignment:
Q  605 gagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||| ||||||||||||| | ||||||||| |||||  |||||| |||| ||||||||||||||| || |||| ||||||||||||    
T  13604825 gagagagcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagataacttatgaaaaca 13604912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 584 - 698
Target Start/End: Complemental strand, 2568773 - 2568659
Alignment:
Q  584 taagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagctt 683  Q
    ||||||||||  |||||||||   ||||||||||||||||| | ||||||| ||||||   | |||| | || |||||||| ||||||||| ||||||||    
T  2568773 taagcacttgagagactgtttagaagaacttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagctt 2568674  T
Q  684 atgaaaacaagttat 698  Q
    |||||||||| ||||    
T  2568673 atgaaaacaacttat 2568659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 612 - 692
Target Start/End: Original strand, 21768180 - 21768260
Alignment:
Q  612 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||| | ||||||||| ||||| ||||||| |||| |||||| |||||||| || |||| ||||||||||||    
T  21768180 cttatgaaaacagcttatgacatgtccatacgctgttttcaacttattttcgtaagctcttcaagataacttatgaaaaca 21768260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 583 - 698
Target Start/End: Original strand, 12459955 - 12460070
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||| ||| |||||||||| |||||| ||||||||||  | ||||||||||||||   ||||||   || ||||||||||||||| || |||||||    
T  12459955 ataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagct 12460054  T
Q  683 tatgaaaacaagttat 698  Q
    | |||| |||| ||||    
T  12460055 tgtgaagacaacttat 12460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 723 - 781
Target Start/End: Complemental strand, 11684397 - 11684339
Alignment:
Q  723 attttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttct 781  Q
    ||||||| || ||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  11684397 attttatattttgttataaaaatagcttatacattagcacttatatgataagcacttct 11684339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 641
Target Start/End: Original strand, 25720371 - 25720429
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    |||||||||||| ||||||| ||||||| ||||| |||||| |||||||||||||||||    
T  25720371 ataagcacttgtgagactgtctgagagagcttataaaaacaattcatgacatgttcata 25720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 583 - 688
Target Start/End: Complemental strand, 4619823 - 4619718
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||  | |||||||| |||| ||||||||||||  | ||||||||||||||  ||| ||| | || |||| |||||| |||||| |||||||    
T  4619823 ataagcacttgcaacactgtttgggagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataagttctccatgatagct 4619724  T
Q  683 tatgaa 688  Q
    ||||||    
T  4619723 tatgaa 4619718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 634 - 766
Target Start/End: Original strand, 4014429 - 4014563
Alignment:
Q  634 tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgt 731  Q
    ||||||||  ||||||| | || ||||||||||| |||||| |||||||||||||||||  ||||   || | |||||||||  | |||| ||||||| |    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatct 4014528  T
Q  732 tgtgttataaaaatagcttatccataagcgcttat 766  Q
    | || |||| ||||||||||| |||| ||||||||    
T  4014529 tttgctatagaaatagcttatacataggcgcttat 4014563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 716
Target Start/End: Original strand, 6587067 - 6587194
Alignment:
Q  589 acttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaa 688  Q
    |||||||| ||||||||  ||||||||  ||||||| | |||||| |||||||  ||||||  | || ||||||| ||| ||||||  ||||||||||||    
T  6587067 acttgttaaactgtttggaagaacttaaaaaaacagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatagcttatgaa 6587166  T
Q  689 aacaagttatttattatacaaaaacaat 716  Q
    ||||| ||||   |||||| ||||||||    
T  6587167 aacaacttatagcttatacgaaaacaat 6587194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 716 - 779
Target Start/End: Original strand, 20982224 - 20982287
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcactt 779  Q
    |||||| |||||||  | ||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  20982224 tgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcactt 20982287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 591 - 698
Target Start/End: Original strand, 37526161 - 37526268
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||| ||||||||||||||| |||||||| |||    |||||||||| |||  ||||||| | || |||| |||||||||||||| | | ||||||||||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaa 37526260  T
Q  691 caagttat 698  Q
    ||| ||||    
T  37526261 caacttat 37526268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 591 - 698
Target Start/End: Original strand, 37588322 - 37588429
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||| ||||||||||||||| |||||||| |||    |||| ||||| |||  ||||||| | || |||| |||||||||||||| ||| ||||||||||    
T  37588322 ttgtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaa 37588421  T
Q  691 caagttat 698  Q
    ||| ||||    
T  37588422 caacttat 37588429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 583 - 637
Target Start/End: Original strand, 499685 - 499739
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgtt 637  Q
    |||||||| |||||| ||||||| |||||||||||||||||| | ||||||||||    
T  499685 ataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgtt 499739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 602 - 692
Target Start/End: Complemental strand, 11707152 - 11707062
Alignment:
Q  602 tttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||||||||||| |||| || | |||||||||| |||   |||||| | || ||||||| ||||||| || |||||||||||||||||    
T  11707152 tttgagagaacttatcaaaatagattatgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaaca 11707062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 775
Target Start/End: Complemental strand, 31694572 - 31694440
Alignment:
Q  645 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaa 742  Q
    |||||| |||| ||||||||||||||| || |  |||||| || ||||| ||||   || || ||||||| |  ||||| | |||||||| ||||||| |    
T  31694572 tgttttcaacttattttcataagctctacaagtgagcttaagagaacaacttatagtttgtataaaaacagtttgactttagtttatgttttgttataga 31694473  T
Q  743 aatagcttatccataagcgcttatatgataagc 775  Q
     ||||||||| ||||||| ||||||||||||||    
T  31694472 catagcttattcataagcacttatatgataagc 31694440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 692
Target Start/End: Original strand, 33533494 - 33533602
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| | ||||||| ||||| |||| |||   |||| ||||||| ||||||   |||||| |||| |||| ||||||||||||| |||||||    
T  33533494 ataagcacttgtgacactgttttagagagcttaagaagt-agtttatgacatattcataagttgttttcaacttatttccataagctctccaagatagct 33533592  T
Q  683 tatgaaaaca 692  Q
    | ||||||||    
T  33533593 tgtgaaaaca 33533602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 586 - 690
Target Start/End: Original strand, 10125675 - 10125779
Alignment:
Q  586 agcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttat 685  Q
    ||||||||| | | ||| |||||||||||||| |||||  | |||||||||| |||   |||||| | || |||||||||||||||||| | || |||||    
T  10125675 agcacttgtgacattgtctgagagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataagctctccatggtaacttat 10125774  T
Q  686 gaaaa 690  Q
    |||||    
T  10125775 gaaaa 10125779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 591 - 698
Target Start/End: Complemental strand, 29925950 - 29925842
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||| |||| ||||| |||||||||||||||||| | |||||| |||||||    | |||| |||| ||||||||||| ||||||  |||||||||| ||    
T  29925950 ttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagcttatgtaa 29925851  T
Q  690 acaagttat 698  Q
    |||| ||||    
T  29925850 acaacttat 29925842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 592 - 692
Target Start/End: Complemental strand, 36638854 - 36638754
Alignment:
Q  592 tgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaac 691  Q
    |||||||||||| | || |  |||||||||| ||  ||||||||||||||  || |||| | || |||| ||||||||||| |||||| |||||||||||    
T  36638854 tgttagactgttggggaaagtttatgaaaactgtgtatgacatgttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaac 36638755  T
Q  692 a 692  Q
    |    
T  36638754 a 36638754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 729
Target Start/End: Original strand, 10272459 - 10272533
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttat 729  Q
    |||||||||| ||||||| ||| |||||||||||||| ||||   |||||| |||||||  ||||||||||||||    
T  10272459 attttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttat 10272533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 774
Target Start/End: Complemental strand, 10391327 - 10391276
Alignment:
Q  723 attttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 774  Q
    ||||||| || ||||||||||||||||||| | ||||| |||||||||||||    
T  10391327 attttatcttttgttataaaaatagcttatacgtaagcacttatatgataag 10391276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 692
Target Start/End: Complemental strand, 40731511 - 40731476
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||||||| |||||||||||||||||||    
T  40731511 attttcataagctctcaaggatagcttatgaaaaca 40731476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 645 - 779
Target Start/End: Complemental strand, 12425625 - 12425488
Alignment:
Q  645 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaa 742  Q
    |||||| |||| ||||||||||| |||||| |||||||| ||||||||  ||||   |||||| |||||||  | |||| ||||||| || |  |||| |    
T  12425625 tgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttactatata 12425526  T
Q  743 aatagcttatccataagcgcttat-atgataagcactt 779  Q
    ||||| |||| |||||||| |||| ||||||| |||||    
T  12425525 aatagtttatacataagcgtttatcatgataaacactt 12425488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 698
Target Start/End: Original strand, 14674899 - 14674969
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||||||||| |||  |||||||||||  ||||||||||| ||| ||||||| ||||||| ||||| ||||    
T  14674899 atgacatgtttataaactgttttaaacatattttcataagttctacaggatatcttatgagaacaacttat 14674969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 698
Target Start/End: Original strand, 15308992 - 15309062
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||| ||||||||| |||||||| | || ||||||||||| |||| | ||||||| |||||||||| ||||    
T  15308992 atgatatgttcataacctgttttcatcttattttcataagatctcaatgatagctaatgaaaacaacttat 15309062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 779
Target Start/End: Complemental strand, 19177459 - 19177397
Alignment:
Q  717 gacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcactt 779  Q
    ||||||||||||| || |||| || |||||| |||| ||||||| |||||||||||| |||||    
T  19177459 gacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgataatcactt 19177397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 662 - 692
Target Start/End: Original strand, 38047888 - 38047918
Alignment:
Q  662 cataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||||||||||||||||||||||    
T  38047888 cataagctctccaggatagcttatgaaaaca 38047918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 663 - 693
Target Start/End: Original strand, 40205108 - 40205138
Alignment:
Q  663 ataagctctccaggatagcttatgaaaacaa 693  Q
    |||||||||||||||||||||||||||||||    
T  40205108 ataagctctccaggatagcttatgaaaacaa 40205138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 774
Target Start/End: Complemental strand, 1961972 - 1961915
Alignment:
Q  717 gacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 774  Q
    ||||||||||||  || |||||||||||||||||||  ||| || |||||||||||||    
T  1961972 gacttaattttacattttgttataaaaatagcttatatataggcacttatatgataag 1961915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 692
Target Start/End: Complemental strand, 28777093 - 28777000
Alignment:
Q  600 tgtttgagagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||| |||||||||| |||| |||| ||||||| ||||| |  || |||| | || |||||||| || |||||| |||||||||||||||||    
T  28777093 tgtttgtgagaacttataaaaatagtttatgacattgttcaaaaactatttttatcttattttcattagttctccaagatagcttatgaaaaca 28777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 692
Target Start/End: Original strand, 41957441 - 41957514
Alignment:
Q  619 aaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||| | ||||||||| ||||   |||||| | || ||||||||||| |||| |||||||||||||||||||    
T  41957441 aaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaaca 41957514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 766
Target Start/End: Complemental strand, 42646954 - 42646846
Alignment:
Q  660 ttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaatg--acttaattttatgttgtgttataaaaatagcttatccata 757  Q
    ||||||||||||||| ||| | |||||||||||  ||||   ||| |||||||||||   ||||||||||||  | ||||||||||||| ||||| ||||    
T  42646954 ttcataagctctccaagatcgtttatgaaaacaccttatagcttaaacaaaaacaatttaacttaattttatcctttgttataaaaatatcttatacata 42646855  T
Q  758 agcgcttat 766  Q
      |||||||    
T  42646854 cccgcttat 42646846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 9e-17; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 583 - 765
Target Start/End: Complemental strand, 28165207 - 28165023
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||| | ||||| ||||||| | |||||| |||||| ||| ||| ||||||||  ||||||| |||| |||| ||||||||||||| |||||||    
T  28165207 ataagcacttatgagactctttgagatagcttatggaaacagctcaagacctgttcataagctgttttcaacttatttccataagctctccatgatagct 28165108  T
Q  683 tatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgctta 765  Q
    ||| || |||  ||||   |||||  |||||||  |||||| ||||||| || ||||||| ||| | ||||| ||||||| ||||    
T  28165107 tataaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 766
Target Start/End: Complemental strand, 12110447 - 12110291
Alignment:
Q  612 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaa 711  Q
    ||||||||||||  | |||||||||||| |  ||||||| |  | ||||||||||| ||| || |||||||||||||||||  ||||   |||||| |||    
T  12110447 cttatgaaaacaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaa 12110348  T
Q  712 acaa--tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttat 766  Q
    ||||  |||||| ||||||| |||||| ||| |||||| |||| |||||| ||||||    
T  12110347 acaatttgactttattttatcttgtgtaatagaaataggttattcataagtgcttat 12110291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 657 - 774
Target Start/End: Complemental strand, 47941365 - 47941243
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttat---gttgtgttataaaaatagctta 751  Q
    |||||||||| |||||| ||||||||||||||||||  ||||  ||||||| |||| |||  ||| | ||||| |   ||||||||||| ||||||||||    
T  47941365 attttcataaactctccgggatagcttatgaaaacagtttatagattatactaaaataatttgaccttattttgtcttgttgtgttatagaaatagctta 47941266  T
Q  752 tccataagcgcttatatgataag 774  Q
    | | |||||||||||||||||||    
T  47941265 ttcttaagcgcttatatgataag 47941243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 662 - 775
Target Start/End: Original strand, 39169449 - 39169563
Alignment:
Q  662 cataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttatccataag 759  Q
    ||||||||||| |||||||||||||||||||  ||||  ||||||||||||||   |||||| ||||| | |||||| ||  ||||||||||| | ||||    
T  39169449 cataagctctc-aggatagcttatgaaaacagtttatagattatacaaaaacagtctgacttcattttttcttgtgtaatggaaatagcttattcgtaag 39169547  T
Q  760 cgcttatatgataagc 775  Q
    |||| |||||||||||    
T  39169548 cgctcatatgataagc 39169563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 590 - 689
Target Start/End: Original strand, 27626084 - 27626183
Alignment:
Q  590 cttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    ||||| ||| ||||||||| | |||||| |||||| | ||||||||| ||||  |||||||||||| |||| |||||||||| || ||||||||| ||||    
T  27626084 cttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataagctcttcatgatagcttaggaaa 27626183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 591 - 692
Target Start/End: Complemental strand, 20526555 - 20526453
Alignment:
Q  591 ttgttagactgtttgagagaacttatgaaaacagttcatgaca-tgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaa 689  Q
    |||| ||||||||||||||||||||||||||||||| || ||| | ||| ||  ||||||| | || |||||||| || ||||||  |||||||||||||    
T  20526555 ttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttttagcttattttcattagttctccaaaatagcttatgaaa 20526456  T
Q  690 aca 692  Q
    |||    
T  20526455 aca 20526453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 693
Target Start/End: Original strand, 25670540 - 25670650
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||| ||||| ||||||||||||| ||||||||||||||  | |||||||||| |||   |||||| | || ||||||| |||||||||| ||||  |    
T  25670540 ataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagatatgt 25670639  T
Q  683 tatgaaaacaa 693  Q
    ||| |||||||    
T  25670640 tataaaaacaa 25670650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 760
Target Start/End: Complemental strand, 46945951 - 46945846
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatcc 754  Q
    |||| |||||||||| | |||||||||| |||||||| ||||  ||||||||  ||||||  || || ||||||| |||||||||| ||||||||||| |    
T  46945951 atttccataagctcttcgggatagcttaagaaaacaaattatagattatacatgaacaatttgatttgattttatcttgtgttatacaaatagcttattc 46945852  T
Q  755 ataagc 760  Q
    ||||||    
T  46945851 ataagc 46945846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 657 - 817
Target Start/End: Complemental strand, 48131390 - 48131231
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatcc 754  Q
    |||||||||||||||||| ||||| | ||||||| |  |||    |||||| |||||| |  ||||| |||| ||||| | ||| |||| ||||| || |    
T  48131390 attttcataagctctccatgatagatcatgaaaatagcttaaaggttatactaaaacattttgactttatttcatgttttattacaaaactagctgatac 48131291  T
Q  755 ataagcgcttatatgataagcacttcttatgatgtaagttgcaaattaagttatttatccaaa 817  Q
    ||||||||||||||||||||||   |||||| |||||| |||||| |||||| | ||||||||    
T  48131290 ataagcgcttatatgataagca---cttatgctgtaagctgcaaaataagttgtgtatccaaa 48131231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 529446 - 529382
Alignment:
Q  628 atgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||| |||||||  ||||||| |||  |||||||||||||||||| |||||||||||||||||    
T  529446 atgacaagttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaaca 529382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 549 - 693
Target Start/End: Original strand, 28691754 - 28691899
Alignment:
Q  549 ctgtttggattgacttatttgaggctatt--cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctg 646  Q
    |||||||||||||||||||||||  |||   ||   ||||||| |||| |||||||| | |||| ||||||||||||| | ||||| ||| ||||   ||    
T  28691754 ctgtttggattgacttatttgagtttatctgctaacataagcatttgtgagactgttcg-gagatcttatgaaaacagcttatgacttgtccataaattg 28691852  T
Q  647 ttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    || | |  | ||||||||||| |||||||||||||||||||||||||    
T  28691853 ttatcagtttattttcataagatctccaggatagcttatgaaaacaa 28691899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 651 - 714
Target Start/End: Original strand, 39542322 - 39542385
Alignment:
Q  651 aaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca 714  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| |||| | ||||||| |||||    
T  39542322 aaacttattttcataagctctccaggataacttatggaaacaacttatatcttatacataaaca 39542385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 645 - 716
Target Start/End: Complemental strand, 44822013 - 44821942
Alignment:
Q  645 tgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat 716  Q
    |||||| |||| ||||||||||| ||||||| ||||||||||||||||  ||||   |||||||||||||||    
T  44822013 tgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaat 44821942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 578 - 712
Target Start/End: Complemental strand, 753090 - 752956
Alignment:
Q  578 cttgtataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccagga 677  Q
    |||| |||||||| | | |||||| |||| ||||||||||||||||||| ||||||| |  |||  ||||||| | || ||||||||| |||| ||| ||    
T  753090 cttgcataagcacctctaagactgattgaaagaacttatgaaaacagtttatgacatatcaataagctgtttttagctaattttcatatgctccccaaga 752991  T
Q  678 tagcttatgaaaacaagttatttattatacaaaaa 712  Q
    ||| |||| ||||||  ||||   |||||||||||    
T  752990 tagtttatcaaaacagcttatagcttatacaaaaa 752956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 685
Target Start/End: Original strand, 3836638 - 3836738
Alignment:
Q  584 taagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagctt 683  Q
    ||||||||||| | |||||||| ||||||||||||||| || | ||||||| | ||||  | || || |||| |||||||| ||||||||| ||||||||    
T  3836638 taagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacat-tacataagccgtcttcaacttattttcattagctctccaagatagctt 3836736  T
Q  684 at 685  Q
    ||    
T  3836737 at 3836738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 690
Target Start/End: Complemental strand, 25596087 - 25596042
Alignment:
Q  645 tgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    |||||| |||| |||||||||||||||||| |||||||||||||||    
T  25596087 tgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 684
Target Start/End: Complemental strand, 33894743 - 33894642
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagct 682  Q
    |||||||||||| |||||||||| |||| |||||||||||||   ||||||||| ||||   |||||| | || ||||  |||| || ||||||||||||    
T  33894743 ataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaactttccaggatagct 33894644  T
Q  683 ta 684  Q
    ||    
T  33894643 ta 33894642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 668
Target Start/End: Complemental strand, 44808274 - 44808189
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagc 668  Q
    ||||||| |||| ||||||||||| ||| |||||||||| |  | ||||||||| |||| |||||||| | || ||||||||||||    
T  44808274 ataagcagttgtcagactgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataagc 44808189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 589 - 781
Target Start/End: Original strand, 5628526 - 5628720
Alignment:
Q  589 acttgttagactgtttgagagaacttatg-aaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatga 687  Q
    |||||| ||||| ||||||||| |||| | ||||||||| |||||||||  |||  |||||| |  || ||||||||||||||||   |||| |||||||    
T  5628526 acttgtgagactatttgagagatcttacggaaaacagtttatgacatgtctataagctgtttcag-cttattttcataagctctctgtgatatcttatga 5628624  T
Q  688 aaacaagttatttattatacaaaaacaatg--acttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcacttct 781  Q
    |||||  |||| | ||| |  |||||| |   |||  |||||||  | ||||||||||||||||||| ||||||| ||| |||||||||| |||||    
T  5628625 aaacagcttatatcttaaatgaaaacagttcaactctattttatcatttgttataaaaatagcttatgcataagcccttgtatgataagcccttct 5628720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 600 - 692
Target Start/End: Complemental strand, 7244779 - 7244687
Alignment:
Q  600 tgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaaca 692  Q
    ||||||| ||| || ||| ||||| || |||||||| |||||   |||||| | || ||||||||||||||||||  ||||||||||||||||    
T  7244779 tgtttgaaagagctgatggaaacaatttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 607 - 698
Target Start/End: Complemental strand, 39968013 - 39967921
Alignment:
Q  607 gagaacttatgaaaacagttcatgacat-gttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||||||||||||||||| | ||| ||| |||||||  ||||||| |||| |||||||| || ||||   |||||||||||||||||| ||||    
T  39968013 gagaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttat 39967921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 657 - 693
Target Start/End: Original strand, 48917374 - 48917410
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaa 693  Q
    |||||||||||||||||| ||||||||||||||||||    
T  48917374 attttcataagctctccaagatagcttatgaaaacaa 48917410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 712
Target Start/End: Original strand, 3968785 - 3968840
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaa 712  Q
    |||| ||||| ||||||||||||||||||||||| |  |||| |||||||||||||    
T  3968785 atttccataaactctccaggatagcttatgaaaatagcttatatattatacaaaaa 3968840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 674
Target Start/End: Original strand, 22387850 - 22387941
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctcca 674  Q
    |||| ||| ||| |||||||||| |||| ||||||||||||  | ||| |||||| |||  ||||||| |||| |||| |||||||||||||    
T  22387850 ataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagctctcca 22387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 692
Target Start/End: Original strand, 27378856 - 27378891
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaaca 692  Q
    |||||||||||||||||||||||| |||||||||||    
T  27378856 attttcataagctctccaggatagtttatgaaaaca 27378891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 716 - 775
Target Start/End: Complemental strand, 35536088 - 35536029
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagc 775  Q
    |||||| ||||||| || ||||||| ||||||||||| |||||||  |||||||||||||    
T  35536088 tgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataagc 35536029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 773
Target Start/End: Complemental strand, 45078256 - 45078217
Alignment:
Q  734 tgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  45078256 tgttataaaaatagcttatacataagcacttatatgataa 45078217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 663 - 770
Target Start/End: Original strand, 3610774 - 3610883
Alignment:
Q  663 ataagctctccaggatagcttatgaaaacaagttatttattatacaaaaacaat--gacttaattttatgttgtgttataaaaatagcttatccataagc 760  Q
    |||||||||| ||||||| ||| |||||||| ||||   |||||| |||||| |  | ||| ||||||| || |||| || ||||||||||| |||||||    
T  3610774 ataagctctctaggatagtttacgaaaacaacttatagcttataccaaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataagc 3610873  T
Q  761 gcttatatga 770  Q
     |||||||||    
T  3610874 acttatatga 3610883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 717 - 779
Target Start/End: Complemental strand, 5373205 - 5373143
Alignment:
Q  717 gacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagcactt 779  Q
    ||||| ||||||| || ||||||| ||||||| ||| ||||||| |||| |||||||||||||    
T  5373205 gactttattttatcttttgttatagaaatagcatatacataagcacttacatgataagcactt 5373143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 637
Target Start/End: Complemental strand, 8094422 - 8094368
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgtt 637  Q
    |||||||||||| ||||| |||||||||  |||||||||||| | ||||||||||    
T  8094422 ataagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgtt 8094368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 555 - 624
Target Start/End: Original strand, 13960648 - 13960718
Alignment:
Q  555 ggattgacttatttgaggctattc-ttgtataagcacttgttagactgtttgagagaacttatgaaaacag 624  Q
    |||||||||||||||||  ||| | ||| |||||||||||  ||||| ||||||||| |||||||||||||    
T  13960648 ggattgacttatttgagcttatccattgcataagcacttgcgagactatttgagagagcttatgaaaacag 13960718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 608 - 666
Target Start/End: Original strand, 15740390 - 15740448
Alignment:
Q  608 agaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataa 666  Q
    ||||||||||||||||  | ||||||||||||||  ||||||| |||| ||||||||||    
T  15740390 agaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 657 - 752
Target Start/End: Original strand, 17989051 - 17989148
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttatttattatacaaaaaca--atgacttaattttatgttgtgttataaaaatagcttat 752  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||   |||||  ||||||   |||||| ||||||| || |||||||||| ||| ||||    
T  17989051 attttcataagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttatattttgttataaaactagtttat 17989148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 724 - 774
Target Start/End: Original strand, 22388001 - 22388051
Alignment:
Q  724 ttttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 774  Q
    |||||| || ||||||| ||||||||||||||||||| |||| ||||||||    
T  22388001 ttttatcttttgttatagaaatagcttatccataagcacttaaatgataag 22388051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 583 - 641
Target Start/End: Complemental strand, 36538024 - 36537966
Alignment:
Q  583 ataagcacttgttagactgtttgagagaacttatgaaaacagttcatgacatgttcata 641  Q
    |||| ||||||| ||| |||||||||||||||||| |||||  | ||||||||||||||    
T  36538024 ataaacacttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcata 36537966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 758
Target Start/End: Complemental strand, 1417295 - 1417203
Alignment:
Q  668 ctctccaggatagcttatgaaaacaagttatttattatacaaaaacaa--tgacttaattttatgttgtgttataaaaatagcttatccataa 758  Q
    ||||||| | |||||||||||||||| |||||  |||||  |||||||  |||||| ||||||| || ||||||| |||||| |||| |||||    
T  1417295 ctctccatgctagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataa 1417203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 690
Target Start/End: Original strand, 22551373 - 22551466
Alignment:
Q  597 gactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaa 690  Q
    ||||||||||||||  || ||||||||| | |||||||||||| |   |||||| | || |||| ||||||||||||| |||  ||||||||||    
T  22551373 gactgtttgagagagattttgaaaacagcttatgacatgttcaaatgttgttttcagcttatttacataagctctccaagattacttatgaaaa 22551466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 698
Target Start/End: Original strand, 24363629 - 24363670
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    |||| ||||| |||||||||||||||||||||||||| ||||    
T  24363629 atttccataacctctccaggatagcttatgaaaacaacttat 24363670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 690
Target Start/End: Original strand, 30723067 - 30723100
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaa 690  Q
    ||||||| ||||||||||||||||||||||||||    
T  30723067 attttcaaaagctctccaggatagcttatgaaaa 30723100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 716 - 773
Target Start/End: Original strand, 45593808 - 45593865
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataa 773  Q
    |||||| |||||||||| ||||| | ||||||||||| |||||||  |||||||||||    
T  45593808 tgactttattttatgttttgttacagaaatagcttatacataagcatttatatgataa 45593865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 698
Target Start/End: Original strand, 46104595 - 46104636
Alignment:
Q  657 attttcataagctctccaggatagcttatgaaaacaagttat 698  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||    
T  46104595 attttcataagctcttcagcatagcttatgaaaacaacttat 46104636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 775
Target Start/End: Original strand, 143157 - 143209
Alignment:
Q  723 attttatgttgtgttataaaaatagcttatccataagcgcttatatgataagc 775  Q
    ||||||| |||||||||| |||||||| || ||||||||||||||||||||||    
T  143157 attttatcttgtgttatagaaatagctaattcataagcgcttatatgataagc 143209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 716 - 772
Target Start/End: Original strand, 1163 - 1219
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgata 772  Q
    |||||| ||||||| || ||||||| ||||||||||| ||||||| |||||||||||    
T  1163 tgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 1219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 716 - 776
Target Start/End: Original strand, 9864 - 9924
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataagca 776  Q
    |||||||||||||| || ||||||| ||||| ||||| ||||||| | |||||||||||||    
T  9864 tgacttaattttattttttgttatagaaataacttatacataagcacctatatgataagca 9924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 716 - 772
Target Start/End: Complemental strand, 2812 - 2756
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgata 772  Q
    |||||| ||||||| || ||||||| ||||||||||| ||||||| |||||||||||    
T  2812 tgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 2756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 774
Target Start/End: Original strand, 6726 - 6784
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 774  Q
    |||||||| ||||| || ||||||| |||||| |||| ||||||| |||||||||||||    
T  6726 tgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataag 6784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 716 - 774
Target Start/End: Original strand, 116645 - 116703
Alignment:
Q  716 tgacttaattttatgttgtgttataaaaatagcttatccataagcgcttatatgataag 774  Q
    |||||||| ||||| || ||||||| |||||| |||| ||||||| |||||||||||||    
T  116645 tgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataag 116703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 663
Target Start/End: Original strand, 9606 - 9671
Alignment:
Q  598 actgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttaaactcattttca 663  Q
    ||||||||||||||||||||||||||  | || |||||||||||  ||||||| | || |||||||    
T  9606 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 9671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 693
Target Start/End: Complemental strand, 306413 - 306332
Alignment:
Q  612 cttatgaaaacagttcatgacatgttcataccctgttttaaactcattttcataagctctccaggatagcttatgaaaacaa 693  Q
    |||||| |||||| | ||||||||  ||||  ||||||| | || | || ||||||||||| ||||||||||||||||||||    
T  306413 cttatggaaacagcttatgacatgcccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaa 306332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University