View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9733_low_18 (Length: 254)
Name: NF9733_low_18
Description: NF9733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9733_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 7290496 - 7290258
Alignment:
| Q |
15 |
caaagggccgtatttttctattgtgatttgttatgtctatatataatgaactttttggtttgtcactccctataaatcaaaatagcactgtaatgtaacc |
114 |
Q |
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| T |
7290496 |
caaagggccatatttttctattgtgatttgttatgtctatatataatgaactttttggtttgtcactccctataaatcaaaataataatgtaatgtaacc |
7290397 |
T |
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| Q |
115 |
ttacatcaaccataacttggaccttgaaggcactaccatgcaagacataaaagataagtttattttacctaaagtatgtttgtgcataattctgcccaac |
214 |
Q |
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| T |
7290396 |
ttaaatcaaccataacttggaccttgaaggcaccaccatgcaaggcataaaagacaagtttattttacctaaagtatgtttgtgcataattctgccaaac |
7290297 |
T |
|
| Q |
215 |
ataccaaaagacgattatcatcaacttgcatcaagaata |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
7290296 |
ataccaaaagacgattatcatcaacttgcatcaagaata |
7290258 |
T |
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