View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9735_14 (Length: 301)

Name: NF9735_14
Description: NF9735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9735_14
NF9735_14
[»] chr8 (34 HSPs)
chr8 (178-297)||(17469302-17469422)
chr8 (183-265)||(24928039-24928123)
chr8 (183-265)||(32303151-32303235)
chr8 (183-265)||(1063603-1063687)
chr8 (183-265)||(20399682-20399766)
chr8 (183-294)||(34777116-34777234)
chr8 (183-265)||(2075748-2075832)
chr8 (188-265)||(40248290-40248369)
chr8 (178-297)||(5858561-5858693)
chr8 (183-297)||(27932460-27932588)
chr8 (187-265)||(4230648-4230728)
chr8 (178-265)||(29108731-29108820)
chr8 (183-262)||(43113540-43113621)
chr8 (183-265)||(1012708-1012792)
chr8 (187-265)||(35215625-35215705)
chr8 (231-297)||(9642326-9642392)
chr8 (188-265)||(34139536-34139621)
chr8 (191-301)||(37960884-37961007)
chr8 (178-296)||(36131838-36131957)
chr8 (183-296)||(14186368-14186482)
chr8 (178-265)||(11254924-11255013)
chr8 (178-265)||(17220802-17220893)
chr8 (183-265)||(29416101-29416185)
chr8 (176-261)||(17084020-17084107)
chr8 (177-297)||(33631819-33631940)
chr8 (178-265)||(27777107-27777196)
chr8 (183-301)||(39445490-39445621)
chr8 (183-262)||(45236158-45236239)
chr8 (183-265)||(15068502-15068586)
chr8 (183-265)||(24869938-24870022)
chr8 (217-293)||(5700407-5700484)
chr8 (183-265)||(15173794-15173878)
chr8 (178-261)||(28345585-28345672)
chr8 (176-243)||(29089888-29089956)
[»] chr4 (38 HSPs)
chr4 (183-297)||(5902535-5902656)
chr4 (183-265)||(37349208-37349292)
chr4 (183-265)||(43893323-43893407)
chr4 (183-265)||(31918473-31918557)
chr4 (178-267)||(53906248-53906339)
chr4 (183-263)||(55826538-55826620)
chr4 (174-265)||(26564927-26565020)
chr4 (183-301)||(32585538-32585663)
chr4 (174-265)||(44317631-44317724)
chr4 (183-265)||(6382187-6382271)
chr4 (183-265)||(11028169-11028253)
chr4 (183-265)||(21423957-21424041)
chr4 (188-297)||(12825395-12825503)
chr4 (178-265)||(7609066-7609155)
chr4 (183-265)||(11122784-11122868)
chr4 (178-265)||(1724180-1724268)
chr4 (183-263)||(31752554-31752636)
chr4 (183-265)||(47550268-47550352)
chr4 (183-297)||(6481950-6482077)
chr4 (183-262)||(19882971-19883052)
chr4 (183-265)||(7334112-7334196)
chr4 (183-265)||(15987177-15987261)
chr4 (183-245)||(13768367-13768430)
chr4 (183-297)||(32596113-32596226)
chr4 (183-263)||(425861-425942)
chr4 (177-265)||(19534545-19534635)
chr4 (188-296)||(25298765-25298874)
chr4 (176-256)||(39047057-39047139)
chr4 (244-301)||(11173022-11173078)
chr4 (183-265)||(19548853-19548936)
chr4 (178-272)||(568482-568575)
chr4 (205-265)||(7985062-7985124)
chr4 (183-287)||(39188577-39188682)
chr4 (178-243)||(48459600-48459666)
chr4 (217-265)||(43553542-43553591)
chr4 (178-265)||(45065345-45065434)
chr4 (249-301)||(31782662-31782713)
chr4 (205-263)||(39375376-39375436)
[»] chr7 (46 HSPs)
chr7 (183-297)||(26004400-26004515)
chr7 (178-297)||(27850241-27850367)
chr7 (178-265)||(35074565-35074654)
chr7 (183-265)||(10072561-10072645)
chr7 (183-262)||(17885563-17885644)
chr7 (189-296)||(23475195-23475303)
chr7 (183-265)||(21702754-21702838)
chr7 (183-265)||(45885679-45885763)
chr7 (183-263)||(16866266-16866348)
chr7 (177-265)||(18825774-18825864)
chr7 (183-265)||(7780103-7780187)
chr7 (183-293)||(23533530-23533641)
chr7 (183-261)||(30650730-30650810)
chr7 (178-265)||(38152982-38153070)
chr7 (184-297)||(41103708-41103828)
chr7 (187-265)||(44658385-44658465)
chr7 (178-264)||(44734268-44734354)
chr7 (177-297)||(24425432-24425553)
chr7 (183-263)||(24753260-24753342)
chr7 (177-265)||(25905723-25905813)
chr7 (185-265)||(37182369-37182451)
chr7 (183-265)||(17851947-17852031)
chr7 (208-297)||(3920590-3920680)
chr7 (183-297)||(12980429-12980556)
chr7 (191-265)||(37579356-37579432)
chr7 (183-263)||(38139706-38139788)
chr7 (183-263)||(39317092-39317174)
chr7 (183-262)||(18125142-18125223)
chr7 (189-296)||(19439942-19440050)
chr7 (183-293)||(16811785-16811895)
chr7 (184-265)||(16079108-16079191)
chr7 (183-265)||(37195923-37196007)
chr7 (183-265)||(37218100-37218184)
chr7 (207-265)||(39455953-39456013)
chr7 (183-296)||(26623004-26623118)
chr7 (178-265)||(44785167-44785256)
chr7 (189-263)||(23457156-23457232)
chr7 (183-265)||(43507540-43507624)
chr7 (169-262)||(3226846-3226941)
chr7 (177-246)||(41741358-41741428)
chr7 (183-286)||(43550343-43550447)
chr7 (207-263)||(45380204-45380261)
chr7 (187-265)||(44985836-44985916)
chr7 (183-262)||(31000073-31000154)
chr7 (183-297)||(45708785-45708906)
chr7 (210-265)||(3157178-3157234)
[»] chr6 (30 HSPs)
chr6 (183-265)||(10187994-10188078)
chr6 (184-297)||(5863298-5863424)
chr6 (183-265)||(30986343-30986427)
chr6 (183-265)||(3483837-3483921)
chr6 (183-265)||(31496524-31496608)
chr6 (183-265)||(31501910-31501994)
chr6 (183-263)||(32853936-32854018)
chr6 (178-265)||(12141475-12141564)
chr6 (183-265)||(27534774-27534858)
chr6 (183-297)||(14410782-14410896)
chr6 (183-265)||(2367416-2367500)
chr6 (176-278)||(14034568-14034671)
chr6 (183-297)||(14506133-14506248)
chr6 (183-293)||(24602782-24602893)
chr6 (183-265)||(10142432-10142516)
chr6 (183-297)||(32053135-32053255)
chr6 (183-267)||(12309666-12309752)
chr6 (183-267)||(24225792-24225878)
chr6 (189-291)||(9402641-9402744)
chr6 (183-265)||(12678008-12678092)
chr6 (188-297)||(27738819-27738941)
chr6 (187-301)||(15498367-15498494)
chr6 (183-297)||(29199811-29199926)
chr6 (183-265)||(34178249-34178333)
chr6 (210-291)||(32959913-32959995)
chr6 (189-265)||(14255047-14255125)
chr6 (183-263)||(29341348-29341430)
chr6 (192-287)||(7393822-7393918)
chr6 (229-301)||(8320768-8320840)
chr6 (183-265)||(28079610-28079694)
[»] chr5 (36 HSPs)
chr5 (178-301)||(12447424-12447547)
chr5 (178-263)||(4920918-4921005)
chr5 (183-265)||(22694817-22694901)
chr5 (183-263)||(20973411-20973493)
chr5 (183-263)||(33727916-33727998)
chr5 (183-265)||(10127164-10127248)
chr5 (183-265)||(29245866-29245950)
chr5 (183-297)||(38006396-38006511)
chr5 (183-265)||(40517896-40517980)
chr5 (178-265)||(3564650-3564737)
chr5 (183-265)||(5908603-5908687)
chr5 (183-265)||(13401919-13402003)
chr5 (183-264)||(18207109-18207192)
chr5 (185-265)||(12866468-12866550)
chr5 (183-263)||(15890298-15890380)
chr5 (178-265)||(17853203-17853292)
chr5 (183-265)||(1218815-1218899)
chr5 (184-265)||(12834490-12834573)
chr5 (183-265)||(30996686-30996769)
chr5 (183-263)||(4583211-4583293)
chr5 (183-291)||(6810211-6810320)
chr5 (189-265)||(42717551-42717629)
chr5 (178-297)||(35311869-35311992)
chr5 (188-265)||(6092449-6092528)
chr5 (184-297)||(35193917-35194031)
chr5 (183-301)||(12457560-12457679)
chr5 (183-265)||(24207774-24207857)
chr5 (183-265)||(27088288-27088370)
chr5 (183-263)||(40187572-40187654)
chr5 (183-301)||(6155835-6155966)
chr5 (230-297)||(10822501-10822568)
chr5 (183-246)||(18451838-18451902)
chr5 (183-265)||(42987395-42987478)
chr5 (177-264)||(2681307-2681396)
chr5 (228-296)||(8453349-8453414)
chr5 (183-265)||(28568936-28569020)
[»] chr3 (43 HSPs)
chr3 (183-265)||(7469692-7469776)
chr3 (184-297)||(49025727-49025841)
chr3 (183-265)||(29284426-29284510)
chr3 (183-265)||(39655187-39655271)
chr3 (183-297)||(23546862-23546983)
chr3 (183-265)||(29858489-29858573)
chr3 (183-265)||(39728761-39728845)
chr3 (183-265)||(49580154-49580238)
chr3 (178-267)||(44953344-44953435)
chr3 (177-265)||(4015952-4016042)
chr3 (183-267)||(10371187-10371273)
chr3 (178-265)||(42758464-42758553)
chr3 (177-265)||(44106702-44106791)
chr3 (183-262)||(54317237-54317318)
chr3 (183-265)||(6738319-6738403)
chr3 (183-265)||(22535755-22535839)
chr3 (183-265)||(44252837-44252921)
chr3 (183-265)||(52572699-52572783)
chr3 (183-263)||(34026046-34026128)
chr3 (183-297)||(48390731-48390858)
chr3 (183-265)||(4557219-4557303)
chr3 (188-265)||(831092-831171)
chr3 (183-297)||(1337087-1337205)
chr3 (187-262)||(43582670-43582747)
chr3 (183-265)||(44639364-44639448)
chr3 (183-263)||(48305555-48305637)
chr3 (176-263)||(20087089-20087178)
chr3 (183-246)||(12369104-12369168)
chr3 (183-265)||(23153979-23154063)
chr3 (183-293)||(10823616-10823733)
chr3 (183-265)||(23580917-23581001)
chr3 (178-264)||(31271208-31271296)
chr3 (184-265)||(31126746-31126829)
chr3 (183-259)||(53632000-53632078)
chr3 (187-265)||(34119746-34119826)
chr3 (208-265)||(52198245-52198304)
chr3 (266-301)||(55438787-55438822)
chr3 (183-216)||(44172735-44172768)
chr3 (183-216)||(44179435-44179468)
chr3 (183-254)||(17146068-17146140)
chr3 (183-265)||(19111824-19111908)
chr3 (188-262)||(23910171-23910247)
chr3 (219-265)||(42243477-42243525)
[»] chr2 (29 HSPs)
chr2 (183-265)||(30847037-30847121)
chr2 (183-293)||(6027815-6027926)
chr2 (176-262)||(42797908-42797995)
chr2 (183-262)||(9632480-9632561)
chr2 (183-265)||(10920729-10920813)
chr2 (183-265)||(24414046-24414130)
chr2 (188-265)||(13830826-13830905)
chr2 (183-297)||(37472673-37472800)
chr2 (183-265)||(36128020-36128104)
chr2 (188-263)||(31942104-31942181)
chr2 (183-297)||(37106740-37106867)
chr2 (183-265)||(12341691-12341775)
chr2 (183-265)||(13705269-13705353)
chr2 (183-265)||(10208345-10208428)
chr2 (183-293)||(37999535-37999652)
chr2 (176-265)||(12193733-12193825)
chr2 (183-286)||(35409094-35409197)
chr2 (192-265)||(45115651-45115726)
chr2 (184-263)||(8915853-8915934)
chr2 (183-246)||(25213952-25214016)
chr2 (183-265)||(44746023-44746107)
chr2 (207-263)||(7314586-7314644)
chr2 (215-294)||(35965385-35965465)
chr2 (183-263)||(18106032-18106115)
chr2 (255-297)||(15546792-15546833)
chr2 (255-297)||(22900842-22900883)
chr2 (183-297)||(14331575-14331696)
chr2 (183-265)||(19104751-19104835)
chr2 (183-265)||(26755831-26755915)
[»] chr1 (34 HSPs)
chr1 (183-265)||(13390488-13390571)
chr1 (178-265)||(20774657-20774746)
chr1 (183-265)||(36187134-36187218)
chr1 (178-297)||(3627906-3628026)
chr1 (178-265)||(17135038-17135127)
chr1 (183-301)||(19572426-19572557)
chr1 (178-261)||(24236670-24236755)
chr1 (178-265)||(29936513-29936602)
chr1 (183-297)||(44615389-44615516)
chr1 (183-297)||(44793053-44793180)
chr1 (178-261)||(5181134-5181219)
chr1 (183-265)||(23490685-23490769)
chr1 (183-265)||(23968670-23968754)
chr1 (177-301)||(45866094-45866230)
chr1 (183-265)||(9982804-9982888)
chr1 (183-297)||(16433093-16433208)
chr1 (183-265)||(49250687-49250771)
chr1 (183-265)||(51421949-51422033)
chr1 (183-267)||(50426569-50426655)
chr1 (183-262)||(18353994-18354075)
chr1 (183-265)||(28298037-28298121)
chr1 (183-246)||(34611184-34611248)
chr1 (183-297)||(49740940-49741055)
chr1 (183-263)||(24710940-24711022)
chr1 (183-265)||(39616383-39616468)
chr1 (183-265)||(34059062-34059146)
chr1 (176-265)||(34673189-34673280)
chr1 (178-265)||(40087373-40087462)
chr1 (183-265)||(16409033-16409116)
chr1 (176-246)||(38106316-38106387)
chr1 (183-263)||(13020686-13020768)
chr1 (183-236)||(42439584-42439638)
chr1 (183-265)||(19003580-19003664)
chr1 (183-265)||(29871200-29871283)
[»] scaffold0022 (1 HSPs)
scaffold0022 (192-293)||(90648-90756)
[»] scaffold0795 (1 HSPs)
scaffold0795 (183-265)||(314-397)
[»] scaffold0036 (2 HSPs)
scaffold0036 (183-267)||(33487-33573)
scaffold0036 (255-297)||(33440-33481)
[»] scaffold0014 (1 HSPs)
scaffold0014 (178-265)||(14093-14182)
[»] scaffold0519 (1 HSPs)
scaffold0519 (178-265)||(10380-10469)
[»] scaffold0027 (1 HSPs)
scaffold0027 (183-265)||(7786-7870)


Alignment Details
Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 17469422 - 17469302
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggtttttccccga 275  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  17469422 ctaggcatggcaacaaaacccatacccgtagttacccacccgaaccaaacccaatttgacggattttccccgttttgactgggtttggg-ttttccccga 17469324  T
Q  276 tttaaaaacacgggtatgggac 297  Q
    ||| ||||||||||||||||||    
T  17469323 tttcaaaacacgggtatgggac 17469302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 24928123 - 24928039
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24928123 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggt 24928039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 32303235 - 32303151
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||    
T  32303235 catggcaacaaaacccatacccgtggttacccgcccgaaacaaacccaatttgacgggttttccccgttttgactgggtttgggt 32303151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 1063687 - 1063603
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| |||||    
T  1063687 catggcaacaaaactcatacccgtggttacccgcccgaaccaaacccgatttgacgggttttccccgttttgactgggtgtgggt 1063603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 20399766 - 20399682
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  20399766 catggcaacaaaaccaatacccgtggttacccgctcgaaccaaacccaatttgacgagttttccccgttttgactgggtttgggt 20399682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 34777234 - 34777116
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt-----ttttccccga 275  Q
    |||||||||||||| |||||||||| ||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||     |||| |||||    
T  34777234 catggcaacaaaactcatacccgtgattacccgtccgaaccaaacccaatttaacgggtttttcccgttttgactgggtttgggtatgggtttttcccga 34777135  T
Q  276 tttaaaaacacgggtatgg 294  Q
    | | |||||||||||||||    
T  34777134 tctcaaaacacgggtatgg 34777116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 2075748 - 2075832
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  2075748 catggcaacaaaactcatatccgtggttacccgcctgaaccaaacccaatttgacggattttctccgttttgactgggtttgggt 2075832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 40248290 - 40248369
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    |||||||||||||||||| |||||| |||| |||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  40248290 caacaaaacccatacccgcggttactcgcctgaaccaaacccaatttgacgggtttttcccgttttgactgggtttgggt 40248369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 5858561 - 5858693
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt---------- 265  Q
    |||| ||||||||||||| ||||||| |||||||||  ||||||||||| ||||||||||||||||| |||||||||| |||||||||||              
T  5858561 ctagacatggcaacaaaatccatacctgtggttacctacccgaaccaaatccaatttgacgggttttccccgttttgattgggtttgggtatgggtttgg 5858660  T
Q  266 -ttttccccgatttaaaaacacgggtatgggac 297  Q
     |||| |||||||||||||||||||||||||||    
T  5858661 gtttttcccgatttaaaaacacgggtatgggac 5858693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 27932588 - 27932460
Alignment:
Q  183 catggcaacaaaacccatacccgtgg-ttacccgcccgaaccaaacc-aatttgacgggttttccc-gttttgactgggtttgggt-----------ttt 268  Q
    |||| ||||||||| |||||||| || |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||           |||    
T  27932588 catgacaacaaaactcatacccgcgggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttt 27932489  T
Q  269 tccccgatttaaaaacacgggtatgggac 297  Q
    |||||||||| ||||||||||||||||||    
T  27932488 tccccgatttcaaaacacgggtatgggac 27932460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 4230648 - 4230728
Alignment:
Q  187 gcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  4230648 gcaacaaaatccatacatgtggttacccgcccgaaccaaacccaatttgacgggttttccccattttgactgggtttgggt 4230728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 29108731 - 29108820
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| ||||||| ||||||||||| | | |||||| || |||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  29108731 ctagacatggcagcaaaacccataactgcggttactcgtccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggt 29108820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 43113540 - 43113621
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttccc-gttttgactgggtttg 262  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||||| | ||||||||||||||    
T  43113540 catggcaataaaactcatacccgtggttacccacccgaaccaaacccaatttaacgggttttccctgctttgactgggtttg 43113621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 1012792 - 1012708
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcc-cgttttgactgggtttgggt 265  Q
    |||||||| |||| |||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||||| || ||||||||    
T  1012792 catggcaataaaatccatacccgtggttacccacccgaatcaaacccaatttgacgggttttcctcgttttgattgagtttgggt 1012708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 35215705 - 35215625
Alignment:
Q  187 gcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttga-cgggttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||||||||| ||| ||||||||||||||| ||||||||||    
T  35215705 gcaacaaaacccatatccgtggttacccgtccgacccaaacccaatttgaccggtttttcccgttttgaccgggtttgggt 35215625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 9642326 - 9642392
Alignment:
Q  231 tttgacgggttttccc-gttttgactgggtttgggtttttccccgatttaaaaacacgggtatgggac 297  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  9642326 tttgacgggttttccccgctttgactgggtttgggtttt-ccccgatttcaaaacacgggtatgggac 9642392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 34139621 - 34139536
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaaccaaac-------caatttgacgggttttcc-cgttttgactgggtttgggt 265  Q
    ||||||||| |||||||||||||| |||||||||||||||       |||||||||||||||||| ||||||||||||||||||||    
T  34139621 caacaaaactcatacccgtggttatccgcccgaaccaaactcaaacccaatttgacgggttttcctcgttttgactgggtttgggt 34139536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 37960884 - 37961007
Alignment:
Q  191 caaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgggt-----------ttttccccgatt 277  Q
    |||||| |||| |||| ||||||| |||||||| |||| ||||||| ||||||| |||||||||||| |||||||||           ||||||||||||    
T  37960884 caaaactcatatccgtagttacccacccgaaccgaacctaatttgatgggtttttcccgttttgactaggtttgggtatgagtttgggttttccccgatt 37960983  T
Q  278 taaaaacacgggtatgggacaggt 301  Q
    ||||||||||||||||||||||||    
T  37960984 taaaaacacgggtatgggacaggt 37961007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 296
Target Start/End: Original strand, 36131838 - 36131957
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgg-gttttcccgttttgactgggtttgggtttttccccga 275  Q
    |||| |||| ||||||||  |||| |||||||||||| ||||||||||||| ||||||| ||  |||| ||||||||| |||||||| | |||||||| |    
T  36131838 ctaggcatgacaacaaaattcatatccgtggttacccacccgaaccaaacctaatttgatggattttttccgttttgattgggtttgag-ttttccccta 36131936  T
Q  276 tttaaaaacacgggtatggga 296  Q
    ||| |||||||| ||||||||    
T  36131937 tttcaaaacacgagtatggga 36131957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 14186482 - 14186368
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacca-atttgacgggttttc-ccgttttgactgggtttgggtttttccccgatttaa 280  Q
    |||| ||||||||| ||||| ||||||||| ||  | || ||||||  ||||||||||||||| ||||||||| |||||||| ||||||| | ||||| |    
T  14186482 catgacaacaaaactcatactcgtggttactcgttctaatcaaacctgatttgacgggttttctccgttttgattgggtttgagtttttctc-gatttca 14186384  T
Q  281 aaacacgggtatggga 296  Q
    ||||||||||||||||    
T  14186383 aaacacgggtatggga 14186368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 11254924 - 11255013
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    |||| |||| |||||||||||||||  | ||||||| | |||||||||| ||||||||||||| |||| ||||||||||| |||||||||    
T  11254924 ctaggcatgacaacaaaacccatacatgcggttacctgtccgaaccaaatccaatttgacgggttttttccgttttgactaggtttgggt 11255013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 17220893 - 17220802
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtg--gttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||| |||||||||| ||||||| |  ||||||||| ||||||||| ||||||||||||||||| ||| ||||||||| ||||||||    
T  17220893 ctaggcatgacaacaaaacctatacccgcgcggttacccgcacgaaccaaatccaatttgacgggttttccccattttgactgagtttgggt 17220802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 29416101 - 29416185
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||  ||||| |  || ||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  29416101 catggcaacaaaattcatactcccgggtacccacccgaaccaaatccaatttgacgggttttccccgttttgactgagtttgggt 29416185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 17084020 - 17084107
Alignment:
Q  176 atctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggttt 261  Q
    |||||| |||| |||||||||||||||  |||| ||||| |||||||||||  ||| |||||||||||| |||| |||||||||||||    
T  17084020 atctagacatgacaacaaaacccatacttgtgggtacccacccgaaccaaattcaagttgacgggttttccccgctttgactgggttt 17084107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 297
Target Start/End: Original strand, 33631819 - 33631940
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggtttttccccg 274  Q
    ||||| |||||||||||| ||||||||||||| ||| | ||||||||||| | || |||||||| |||||||| ||||||||  ||| || |||| || |    
T  33631819 tctagacatggcaacaaagcccatacccgtgggtacgcacccgaaccaaatctaaattgacgggtttttcccgctttgactgaattt-ggattttacctg 33631917  T
Q  275 atttaaaaacacgggtatgggac 297  Q
    || | |||||| |||||||||||    
T  33631918 atctcaaaacatgggtatgggac 33631940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 27777107 - 27777196
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||| |||| ||||||||| ||||||||  | ||||   |||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  27777107 ctaggcatgacaacaaaactcatacccgcaggtacctatccgaaccaaacttaatttgacgggttttctccgttttgactgggtttgggt 27777196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 39445490 - 39445621
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttccc-gttttgactgggtttgggt-----------tttt 269  Q
    |||||||| |||| | ||| ||| |||||| || ||||||||||| ||||||||||| ||||||| ||||||||| |||||||||           ||||    
T  39445490 catggcaataaaatcaatatccgcggttactcgtccgaaccaaactcaatttgacggattttccccgttttgactaggtttgggtatgggtatgggtttt 39445589  T
Q  270 ccccgatttaaaaacacgggtatgggacaggt 301  Q
     |||||||| ||||||||||||||||||||||    
T  39445590 tcccgatttcaaaacacgggtatgggacaggt 39445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 45236239 - 45236158
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttg 262  Q
    ||||||||||||||||| |||||  |||||| | | || ||||| ||||||||||||||||| ||||||||||||| |||||    
T  45236239 catggcaacaaaacccaaacccgcagttacctgtctgagccaaaaccaatttgacgggttttccccgttttgactgagtttg 45236158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 15068502 - 15068586
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaa-accaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||| | ||| ||| ||||||||| ||||||  || |||||||||||||| |||| ||||||||||| |||||    
T  15068502 catggcaacaaaacccgtgcccatgggtacccgcccaaaccaaccccgatttgacgggttttccccgatttgactgggtctgggt 15068586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 24869938 - 24870022
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||| ||||  ||||| |||| |||| |||| ||||||||||||||||| |||||||||||||  |||||||    
T  24869938 catgacaacaaaacccacacccacggttatccgctcgaatcaaatccaatttgacgggtttttcccgttttgactgaatttgggt 24870022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 5700484 - 5700407
Alignment:
Q  217 ccgaaccaaaccaattt-gacgggttttc-ccgttttgactgggtttgggtttttccccgatttaaaaacacgggtatg 293  Q
    |||||||||||| |||| ||||||||||  |||||||||||||||||  |||||| |||||||| ||||||| ||||||    
T  5700484 ccgaaccaaacctattttgacgggttttttccgttttgactgggtttaagttttt-cccgatttcaaaacacaggtatg 5700407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 15173794 - 15173878
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    ||||||||||||| || || || ||| ||||||||| |||||| | | ||||||||||||||| | | |||||||||||||||||    
T  15173794 catggcaacaaaatccttatccatgggtacccgcccaaaccaacctcgatttgacgggttttctctgatttgactgggtttgggt 15173878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 28345672 - 28345585
Alignment:
Q  178 ctagccatggcaacaaaacccata--cccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggttt 261  Q
    |||| |||||||||||||| ||||  |||| |  ||||||||||||||||| ||  ||||||||||||| |||| |||||||||||||    
T  28345672 ctaggcatggcaacaaaactcatatacccgcgactacccgcccgaaccaaatcctttttgacgggtttttcccgctttgactgggttt 28345585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 29089956 - 29089888
Alignment:
Q  176 atctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt 243  Q
    |||||| |||||||||||| ||||||    ||||||||| |||||| |||| |||||||||||||||||    
T  29089956 atctaggcatggcaacaaagcccatatttatggttacccacccgaatcaaacccaatttgacgggtttt 29089888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 5902535 - 5902656
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt-----ttttccccga 275  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||     ||||||||||    
T  5902535 catggcaacaaaacctatacccgtggttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgggttttccccga 5902634  T
Q  276 tttaaaaacacgggtatgggac 297  Q
    | |  |||||||||||||||||    
T  5902635 tctcgaaacacgggtatgggac 5902656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 37349292 - 37349208
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||    
T  37349292 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacaggttttccccgttttgactgggtttgggt 37349208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 43893407 - 43893323
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  43893407 catggcaacaaaacccatacccgtggttacccgcccgagccaaacccaatttgacgggttttccccgttttgactgggtttgggt 43893323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 31918473 - 31918557
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  31918473 catggcaacaaaacccatatccgtggttacctgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggt 31918557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 53906248 - 53906339
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggttt 267  Q
    |||| ||||||||||||||||||||||  ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  53906248 ctaggcatggcaacaaaacccatacccacggttatccgcccgaaccaaacccaatttgacgggtttttcccgttttgactgggtttgggttt 53906339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 55826538 - 55826620
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttccc-gttttgactgggtttgg 263  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  55826538 catggcaacaaaacccatacccgtggttacccgtccgaaccaaatccaatttgacggattttccctgttttgactgggtttgg 55826620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 26565020 - 26564927
Alignment:
Q  174 aaatctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||  ||||||||||||||||||||    
T  26565020 aaatttaggcatggcaacaaaacccatacccgtggttacccacccgaaccaaatccaatttgacggattttcttcgttttgactgggtttgggt 26564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 301
Target Start/End: Complemental strand, 32585663 - 32585538
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt-----ttttccccga 275  Q
    |||||||||||||| |||||||| ||||| |||||| ||||||| |||||||||| |||||| ||| ||||||||||||||||||     ||||| ||||    
T  32585663 catggcaacaaaactcatacccgcggttatccgcccaaaccaaacccaatttgaccggttttcccctttttgactgggtttgggtatgaattttctccga 32585564  T
Q  276 tttaaaaacacgggtatgggacaggt 301  Q
    ||| ||||||||||||||||||||||    
T  32585563 tttcaaaacacgggtatgggacaggt 32585538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 265
Target Start/End: Complemental strand, 44317724 - 44317631
Alignment:
Q  174 aaatctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||| |||| |||||||||||| |||| ||||||||||||||||||||||    
T  44317724 aaatctaggcaaggcaacaaaacccatacccgtggttactcgcccgaatcaaacccaatttgacggattttccccgttttgactgggtttgggt 44317631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 6382187 - 6382271
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||    
T  6382187 catggcaataaaacccatacccgtggttacccgcccgaatcaaacccaatttgacgggttttccccgctttgactgggtttgggt 6382271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 11028253 - 11028169
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  11028253 catggcaacaaaacccatacacgtggttacccacccgaaccaaacccaatttgacgggttttctccgttttgactggatttgggt 11028169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 21424041 - 21423957
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgg-gttttcccgttttgactgggtttgggt 265  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  21424041 catggcaataaaactcatacccgtggttacccgcccgaaccaaatccaatttgacggatttttcccgttttgactgggtttgggt 21423957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 297
Target Start/End: Original strand, 12825395 - 12825503
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttcccgttttgactgggtttgggtttttccccgatttaaaaacac 286  Q
    ||||||||||||||||| || ||||||| | |||| ||||  ||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  12825395 caacaaaacccatacccttgattacccgtc-gaacaaaacttaatttgacgtgttttcccgttttgactgagtttggg-ttttccccgatttcaaaacac 12825492  T
Q  287 gggtatgggac 297  Q
    |||||||||||    
T  12825493 gggtatgggac 12825503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 7609155 - 7609066
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||||||| |||||||||||||| |||||||    
T  7609155 ctagacatggcaacaaaacccatactcgtggttacccacccgaactaaacccaatttgacgggttttccccgttttgactggatttgggt 7609066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 11122784 - 11122868
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgg-gttttcccgttttgactgggtttgggt 265  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||| ||||||||    
T  11122784 catggcaacaaaactcatacccgtggttacccgcccgaaccaaactcaatttgacggattttttccgttttgactgagtttgggt 11122868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 1724180 - 1724268
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcccgttttgactgggtttgggt 265  Q
    |||| ||||| |||||||| |||||||||| |||||| |||||||||||| |||||||||| ||||||||  |||||||||||||||||    
T  1724180 ctaggcatggtaacaaaactcatacccgtgtttacccacccgaaccaaactcaatttgacgtgttttccccgtttgactgggtttgggt 1724268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 31752636 - 31752554
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgg 263  Q
    |||| |||||||||||||||||| ||||||||||||||| |||| ||||||||||||| |||| ||||||||| |||||||||    
T  31752636 catgacaacaaaacccatacccgcggttacccgcccgaatcaaatccaatttgacgggtttttaccgttttgattgggtttgg 31752554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 47550268 - 47550352
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||| ||||||| ||| |||| ||| ||||||||||||||||||    
T  47550268 catggaaacaaaacccatacatgtggttacccgcccgaaccaaactcaatttggcggattttccccattttgactgggtttgggt 47550352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 6481950 - 6482077
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttc-ccgttttgactgggtttgggt-----------tttt 269  Q
    ||||||||||||||| ||||||||||||| || |||||| ||||| ||||||||||| ||||| | ||||||| |||||||||||           ||||    
T  6481950 catggcaacaaaacctatacccgtggttatccacccgaatcaaactcaatttgacggattttctctgttttgattgggtttgggtatgggtttgggtttt 6482049  T
Q  270 ccccgatttaaaaacacgggtatgggac 297  Q
    |||| |||||||||||||||||||||||    
T  6482050 ccccaatttaaaaacacgggtatgggac 6482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 19882971 - 19883052
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttg 262  Q
    |||||||||||||||||||| || |  ||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||    
T  19882971 catggcaacaaaacccatactcgcgaatacccgcccgaaccaaacccaatttgacgggtttttcccgctttgattgggtttg 19883052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 7334112 - 7334196
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||  | || || ||||| |||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  7334112 catggcaacaaaacccatacttgcgggtatccgcctgaaccaaacctaatttgacgggtttttcccgctttgactgggtttgggt 7334196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 15987177 - 15987261
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    ||||||||||||||||| |  || |||||||| ||||||||||| |||||||||||||||||| || |||||| |||||||||||    
T  15987177 catggcaacaaaacccacattcgcggttacccacccgaaccaaacccaatttgacgggttttctccattttgattgggtttgggt 15987261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 245
Target Start/End: Original strand, 13768367 - 13768430
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcc 245  Q
    ||||||||||||||| |||||| ||||||||| |||||| ||||| ||||||||||||||||||    
T  13768367 catggcaacaaaaccgatacccatggttacccacccgaatcaaactcaatttgacgggttttcc 13768430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 32596113 - 32596226
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcccgttttgactgggtttgggtttttccccgatttaaa 281  Q
    ||||||||||||||||| || |  ||||| ||| || |||||||| ||||||||| | |||||  ||||||| |||||| ||||||| ||||||||| ||    
T  32596113 catggcaacaaaacccacactcacggttatccgtccaaaccaaactcaatttgacagattttct-gttttgaatgggttggggtttt-ccccgatttcaa 32596210  T
Q  282 aacacgggtatgggac 297  Q
    ||||||||||||||||    
T  32596211 aacacgggtatgggac 32596226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 425942 - 425861
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttcccgttttgactgggtttgg 263  Q
    |||| ||||||||| ||||| |||||||| ||| ||||||| |||| ||||||  || ||||||||||||||||||||||||    
T  425942 catgacaacaaaactcatactcgtggttatccgtccgaacctaacctaatttgggggtttttcccgttttgactgggtttgg 425861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 19534635 - 19534545
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    ||||| |||||||| |||||| ||| ||||| ||||| | || ||||||| |||||||||||||||||| ||||||| | |||||||||||    
T  19534635 tctaggcatggcaaaaaaaccaatatccgtgattacctgtccaaaccaaatccaatttgacgggttttctccgttttcattgggtttgggt 19534545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 296
Target Start/End: Original strand, 25298765 - 25298874
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggtttttccccgatttaaaaaca 285  Q
    ||||||||| ||||| |  || ||||||||||| |||||  ||||||||||| |||| |||  ||||||||||||||||||||| || ||||| ||||||    
T  25298765 caacaaaactcatactcacggatacccgcccgacccaaattcaatttgacggatttttcccactttgactgggtttgggttttt-ccggatttcaaaaca 25298863  T
Q  286 cgggtatggga 296  Q
    |||||| ||||    
T  25298864 cgggtacggga 25298874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 39047139 - 39047057
Alignment:
Q  176 atctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactg 256  Q
    |||||| ||||||||||||||| ||| ||  ||||||||| ||||| |||| ||||||||| |||||||| ||||||||||||    
T  39047139 atctaggcatggcaacaaaacctatatccacggttacccgtccgaatcaaacccaatttgatgggttttctccgttttgactg 39047057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 11173078 - 11173022
Alignment:
Q  244 cccgttttgactgggtttgggtttttccccgatttaaaaacacgggtatgggacaggt 301  Q
    |||| |||||||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  11173078 cccgatttgactgggtttgggtttt-ccccgatttcaaaatacgggtacgggacaggt 11173022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 19548853 - 19548936
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttcccgttttgactgggtttgggt 265  Q
    |||| ||||||||| ||||||  ||| ||||  ||||||||||||| |||||||||| ||| |||  |||||||||||||||||    
T  19548853 catgacaacaaaactcatacctatgggtacctacccgaaccaaacccaatttgacggttttcccctctttgactgggtttgggt 19548936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 568575 - 568482
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttccc-gttttgactgggtttgggtttttccc 272  Q
    |||| |||||||||||||||||| ||| ||| |    |||| |||||| || |||||||||||||||||| | ||||||| ||||||||||||||||    
T  568575 ctaggcatggcaacaaaacccatgcccatgggtt---gcccaaaccaaccctaatttgacgggttttccccgatttgactaggtttgggtttttccc 568482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 7985062 - 7985124
Alignment:
Q  205 gtggttacccgcccgaaccaaacc-aatttgacgggttttcc-cgttttgactgggtttgggt 265  Q
    ||||||| ||||| |||||||||| |||||||||||||||||  ||||||| |||||||||||    
T  7985062 gtggttatccgcctgaaccaaacccaatttgacgggttttcctggttttgattgggtttgggt 7985124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 39188682 - 39188577
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttccc-gttttgactgggtttgggtttttccccgatttaa 280  Q
    |||| ||||||||| ||||| |||||||||  | |||||| ||||| ||||||| |||||||  | ||||||| |||||||||| ||||||| ||||| |    
T  39188682 catgacaacaaaactcatacacgtggttacttgtccgaactaaacccaatttgatgggttttttctgttttgattgggtttggg-ttttccctgatttta 39188584  T
Q  281 aaacacg 287  Q
    |||||||    
T  39188583 aaacacg 39188577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 48459666 - 48459600
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggtttt 243  Q
    |||| ||||||||||||| ||||| ||| ||||||||| ||||| |||||| ||||||| |||||||    
T  48459666 ctaggcatggcaacaaaatccatatccgcggttacccgtccgaatcaaaccaaatttgatgggtttt 48459600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 43553591 - 43553542
Alignment:
Q  217 ccgaaccaaaccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    ||||||||| |||||||||||||||||| ||| |||||||| ||||||||    
T  43553591 ccgaaccaacccaatttgacgggttttctccgctttgactgagtttgggt 43553542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 45065434 - 45065345
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaa-accaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||||| | ||| ||| ||||||||| ||||||  || |||||||| ||||| |||  |||||||||||||||||    
T  45065434 ctaggcatggcaacaaaacccgtgcccatgggtacccgcccaaaccaaccccgatttgacgagttttccccaatttgactgggtttgggt 45065345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 31782713 - 31782662
Alignment:
Q  249 tttgactgggtttgggtttttccccgatttaaaaacacgggtatgggacaggt 301  Q
    |||||||||||||||||||| ||||||||| |||| ||||||| || ||||||    
T  31782713 tttgactgggtttgggtttt-ccccgatttcaaaatacgggtacggtacaggt 31782662  T

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Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 39375436 - 39375376
Alignment:
Q  205 gtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgg 263  Q
    ||||||||||||||||||||||  |||||||||||| ||||||  ||||||||| ||||||    
T  39375436 gtggttacccgcccgaaccaaattcaatttgacgggtttttcctattttgactgagtttgg 39375376  T

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Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 26004400 - 26004515
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacggg-ttttcccgttttgactgggtttgggtttttccccgatttaa 280  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||| |||||| |    
T  26004400 catggcaacaaaactcatacccgtggttacccgcccgaaccaaacacaatttgatgggtttttcccgttttgactgggtttggg-ttttcctcgatttca 26004498  T
Q  281 aaacacgggtatgggac 297  Q
    ||||  |||||||||||    
T  26004499 aaacttgggtatgggac 26004515  T

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Target: chr7; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 27850241 - 27850367
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt-----ttttc 270  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||||||     |||||    
T  27850241 ctaggcatggcaacaaaactcatatccgtggttacccgcccgaaccaaacccaatttgacggtttttccccgttttgattgggtttgggtatgggttttc 27850340  T
Q  271 cccgatttaaaaacacgggtatgggac 297  Q
    |||||||| ||||||||||||||||||    
T  27850341 cccgatttcaaaacacgggtatgggac 27850367  T

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Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 35074654 - 35074565
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  35074654 ctaggcatggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaattagacgggttttccccgttttgactgggtttgggt 35074565  T

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Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 10072645 - 10072561
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  10072645 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggt 10072561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 17885644 - 17885563
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttg 262  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  17885644 catggcaacaaaacccatacccgtggttacctgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttg 17885563  T

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Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 23475195 - 23475303
Alignment:
Q  189 aacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggtttttccccgatttaaaaacac 286  Q
    |||||||||||||||||||| ||||| | |||||||||| |||||||||||||||| |||| ||||||||||||||||||||| |||||||| |||||||    
T  23475195 aacaaaacccatacccgtggataccctctcgaaccaaactcaatttgacgggttttccccgctttgactgggtttgggttttt-cccgatttcaaaacac 23475293  T
Q  287 gggtatggga 296  Q
    |||| |||||    
T  23475294 gggtttggga 23475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 21702838 - 21702754
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgg-gttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  21702838 catggcaacaaaacccatatccgtggttacccgcccgaaccaaacccaatttgacggatttttcccgttttgactgggtttgggt 21702754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 45885679 - 45885763
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  45885679 catggcaacaaaacccatacccgtggttacccgctcgaaccaaacccaatttaacgggttttctccgttttgactgggtttgggt 45885763  T

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Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 16866348 - 16866266
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgg 263  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16866348 catggcaacaaaactcatatccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgg 16866266  T

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Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 18825774 - 18825864
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||| |||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  18825774 tctaggcatggcaacaaaacccatacccatggttaaccgtccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggt 18825864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 7780187 - 7780103
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  7780187 catggcaacaaaacccatacccgtggttacccatccgaaccaaactcaatttgacggattttccccgttttgactgggtttgggt 7780103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 23533530 - 23533641
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggtttttccccgatttaa 280  Q
    |||| |||||||| ||||||||| || ||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||||| |    
T  23533530 catgacaacaaaatccatacccgcgggtaccctcccgaaccaaacccaatttgacgggtttttcccgatttgactgggtttggg-ttttccccgatttga 23533628  T
Q  281 aaacacgggtatg 293  Q
    ||| |||||||||    
T  23533629 aaatacgggtatg 23533641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 30650810 - 30650730
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggttt 261  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  30650810 catgtcaacaaaactcatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggttt 30650730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 38153070 - 38152982
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcccgttttgactgggtttgggt 265  Q
    |||| ||||||||||||| | ||||||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  38153070 ctaggcatggcaacaaaaactatacccacggttacccgcccgaaccaaactcaatttgacggattttcccgttttgactgggtttgggt 38152982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 297
Target Start/End: Complemental strand, 41103828 - 41103708
Alignment:
Q  184 atggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgg-gttttcccgttttgactgggtttgggt-----ttttccccgat 276  Q
    ||||||||||||| |||||| |||||||||||| ||||||||| || |||||||||  |||||||||||||||||||| |||||     |||||||||||    
T  41103828 atggcaacaaaactcatacctgtggttacccgcgcgaaccaaatccgatttgacggatttttcccgttttgactgggtgtgggtatgggttttccccgat 41103729  T
Q  277 ttaaaaacacgggtatgggac 297  Q
    || ||||||||||||||||||    
T  41103728 ttcaaaacacgggtatgggac 41103708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 44658385 - 44658465
Alignment:
Q  187 gcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcc-cgttttgactgggtttgggt 265  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  44658385 gcaacaaaacccatacccgcggttacctgcccgaaccaaatccaatttgacgggttttcctcgttttgactgggtttgggt 44658465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 44734268 - 44734354
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcccgttttgactgggtttggg 264  Q
    |||| |||||||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  44734268 ctaggcatggcaacaaaactcatactcgcggttacccgcccgaaccaaacccaatttgacgggttttccc-ttttgactgggtttggg 44734354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 297
Target Start/End: Complemental strand, 24425553 - 24425432
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggtttttccccg 274  Q
    ||||| |||||||||||||| ||||| |||||||||| |||||||||||| |||||||||||| ||||| ||||||||| ||||||| |  ||||| | |    
T  24425553 tctaggcatggcaacaaaactcatacacgtggttaccagcccgaaccaaacccaatttgacggattttctccgttttgattgggttt-gaattttctctg 24425455  T
Q  275 atttaaaaacacgggtatgggac 297  Q
    |||| ||||||||||||||||||    
T  24425454 atttcaaaacacgggtatgggac 24425432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 24753342 - 24753260
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgg 263  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  24753342 catggcaacaaaacccatacccgtggttacccgtccgaaccaaattcaatttgacggattttctccgttttgactgggtttgg 24753260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 25905813 - 25905723
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||| ||| ||||||||||||||||||    
T  25905813 tctaggcatggcaacaaaacccatacccgtggttacccgctcgaactaaacccaatttgacaggttttcccctttttgactgggtttgggt 25905723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 37182451 - 37182369
Alignment:
Q  185 tggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  37182451 tggcaacaaaacccatatccgcggttacccgcccgaatcaaactcaatttgacgggttttccccgttttgactgggtttgggt 37182369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 17852031 - 17851947
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||  |||||||||||||||||||||| ||||||||| || ||||| |||||||||||||||||||||    
T  17852031 catggcaacaaaacccatacttgtggttacccgcccgaaccaaacccaatttgatggattttctccgttttgactgggtttgggt 17851947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 3920680 - 3920590
Alignment:
Q  208 gttacccgcccgaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgggtttttccccgatttaaaaacacgggtatgggac 297  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  3920680 gttacccacccgaaccaaacccaatttgatgggtttttcccgttttgactgggtttggg-ttttccccgatttcaaaacactggtatgggac 3920590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 12980556 - 12980429
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt-----------tttt 269  Q
    |||||||||||||| |||||||||||||||||||  ||||||||| |||||| ||||||||| ||| ||||||||||||||||||           ||||    
T  12980556 catggcaacaaaactcatacccgtggttacccgctagaaccaaactcaatttaacgggttttccccattttgactgggtttgggtatgggttttggtttt 12980457  T
Q  270 ccccgatttaaaaacacgggtatgggac 297  Q
    ||||||||| ||||||||||||||||||    
T  12980456 ccccgatttcaaaacacgggtatgggac 12980429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 37579432 - 37579356
Alignment:
Q  191 caaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||||| |||||||||    
T  37579432 caaaacccatacgcgtggttacccgcccgaaccaaacccaattagacgggttttccccgttttgactaggtttgggt 37579356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 38139706 - 38139788
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgg 263  Q
    |||||||| |||||||||| ||| |||||||||||||||||||| ||||||||| || |||| ||||||||||||||||||||    
T  38139706 catggcaagaaaacccatatccgcggttacccgcccgaaccaaacccaatttgatggattttccccgttttgactgggtttgg 38139788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 39317174 - 39317092
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgg 263  Q
    |||||||||||||  ||||| || ||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  39317174 catggcaacaaaattcatactcgcggttatccgcccgaaccaaactcaatttgacgggttttccccgttttgactgggtttgg 39317092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 18125142 - 18125223
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttg 262  Q
    |||| ||||||||  |||| |||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  18125142 catgacaacaaaattcatatccgtggttactcgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttg 18125223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 19439942 - 19440050
Alignment:
Q  189 aacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggtttttccccgatttaaaaacac 286  Q
    ||||||| ||||||||| || ||||| | ||||||||| ||||||||||||||||| |||| |||||||||||||| | ||||||| ||||| |||||||    
T  19439942 aacaaaaaccatacccgcgggtaccctctcgaaccaaacccaatttgacgggttttccccgctttgactgggtttgag-ttttccctgatttgaaaacac 19440040  T
Q  287 gggtatggga 296  Q
    |||| |||||    
T  19440041 gggtttggga 19440050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 16811895 - 16811785
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttc-ccgttttgactgggtttgggtttttccccgatttaa 280  Q
    ||||||||||||||| |||| ||||||||| |||||||||| ||| ||||||||| ||||||| || ||||||||| |||||| |||| ||||||| | |    
T  16811895 catggcaacaaaacc-atactcgtggttactcgcccgaacctaactcaatttgacaggttttctccattttgactgagtttggatttt-ccccgatctca 16811798  T
Q  281 aaacacgggtatg 293  Q
    |||||||||||||    
T  16811797 aaacacgggtatg 16811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 16079191 - 16079108
Alignment:
Q  184 atggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacg-ggttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| ||||||||| | |||| | |||||||||| ||||||||    
T  16079191 atggcaacaaaacccatactcgtggttacccgcccgaagcaaacctaatttgacgagttttttcggttttgactgagtttgggt 16079108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 37195923 - 37196007
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttccc-gttttgactgggtttgggt 265  Q
    |||| |||||||| ||||||||||||||| |||||| |||||||| ||||||||||| ||||||| ||||||| | |||||||||    
T  37195923 catgacaacaaaatccatacccgtggttatccgcccaaaccaaactcaatttgacggattttccctgttttgattaggtttgggt 37196007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 37218184 - 37218100
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttccc-gttttgactgggtttgggt 265  Q
    |||| ||||||||| |||||| | || ||||| |||||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  37218184 catgacaacaaaactcataccagcggatacccacccgaaccaaactcaatttgatgggttttccccgttttgactgggtttgggt 37218100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 39455953 - 39456013
Alignment:
Q  207 ggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  39455953 ggttacccgcccgaaccaaacccaatttgacgagttttccccgttttgactgggtttgggt 39456013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 26623118 - 26623004
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttccc-gttttgactgggtttgggtttttccccgatttaa 280  Q
    |||| ||||||||| |||||||||| ||| | | ||||||||||  || |||| ||| ||||||| ||||||| |||||||||||||| ||| ||||| |    
T  26623118 catgacaacaaaactcatacccgtgtttatcggtccgaaccaaattcattttgtcggattttccccgttttgagtgggtttgggtttt-ccctgatttca 26623020  T
Q  281 aaacacgggtatggga 296  Q
    ||||||||||||||||    
T  26623019 aaacacgggtatggga 26623004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 44785167 - 44785256
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||  |||||  ||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||  ||||||||    
T  44785167 ctaggcatggcaacaaaattcatacatgtggttacccgcccgaatcaaacccaatttgacgagttttccccgttttgactaagtttgggt 44785256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 23457232 - 23457156
Alignment:
Q  189 aacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgg 263  Q
    |||||||| |||||||| || ||||| | ||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  23457232 aacaaaactcatacccgcgggtaccctctcgaaccaaacccaatttgacgggttttccccgctttgactgggtttgg 23457156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 43507624 - 43507540
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttccc-gttttgactgggtttgggt 265  Q
    |||||||| ||||  |||| ||| ||||||||| | |||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  43507624 catggcaataaaattcatatccgcggttacccgtctgaaccaaacccaatttgatgggttttccccgttttgactgggtttgggt 43507540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 262
Target Start/End: Original strand, 3226846 - 3226941
Alignment:
Q  169 ccctaaaatctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcc-cgttttgactgggtttg 262  Q
    |||| |||| ||| ||||||||||||| ||||||  | ||||||||| |||||||||| |||||||||||| |||||| |||||| |||| |||||    
T  3226846 cccttaaatttaggcatggcaacaaaatccatacatgcggttacccgtccgaaccaaacccaatttgacggattttcctcgttttaactgagtttg 3226941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 41741358 - 41741428
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttccc 246  Q
    ||||| |||||||||||||||||||   | |||||||||||||||||||| ||||||||| | ||||||||    
T  41741358 tctaggcatggcaacaaaacccatatttgcggttacccgcccgaaccaaacccaatttgatgagttttccc 41741428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 43550343 - 43550447
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgggtttttccccgatttaa 280  Q
    |||| ||||||||| |||| |||||| |||||| | ||| |||||| ||||||||||||||| ||| |||||| |||||||| | ||||||||| ||| |    
T  43550343 catgacaacaaaactcatatccgtggatacccgtctgaatcaaacctaatttgacgggttttccccattttgattgggtttgag-ttttccccgttttta 43550441  T
Q  281 aaacac 286  Q
    ||||||    
T  43550442 aaacac 43550447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 45380261 - 45380204
Alignment:
Q  207 ggttacccgcccgaaccaaacc-aatttgacgggttttcccgttttgactgggtttgg 263  Q
    ||||||||| |||||||||||| |||||||||| ||| || |||||||||||||||||    
T  45380261 ggttacccgtccgaaccaaacccaatttgacggttttccctgttttgactgggtttgg 45380204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 44985836 - 44985916
Alignment:
Q  187 gcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||||||||| ||||| || ||||||||  |||||||||| | |||||||||| ||||| ||||||||| |||||||||||    
T  44985836 gcaacaaaactcatactcgcggttacccatccgaaccaaatctaatttgacggattttctccgttttgattgggtttgggt 44985916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 31000154 - 31000073
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttg 262  Q
    ||||||||||||||||||||||  ||  |||||||| ||| ||| ||||||| ||||||||| |||| ||||||| ||||||    
T  31000154 catggcaacaaaacccatacccacggacacccgcccaaactaaacccaatttaacgggttttacccgctttgactaggtttg 31000073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 45708785 - 45708906
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcc-cgttttgactgggtttgggt-----ttttccccga 275  Q
    |||||||||||||| ||||  |||| ||| ||||||||| |||| |||||||||  | |||||| |||||||||||||||| |||     ||||| ||||    
T  45708785 catggcaacaaaactcatatacgtgattatccgcccgaatcaaatccaatttgatagattttcctcgttttgactgggttttggtatgggttttctccga 45708884  T
Q  276 tttaaaaacacgggtatgggac 297  Q
    | | ||||||||||||| ||||    
T  45708885 tctcaaaacacgggtattggac 45708906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 3157234 - 3157178
Alignment:
Q  210 tacccgcccgaaccaaacc-aatttgacgggttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||| |||||| ||| ||| |||| ||||||| |||||||||    
T  3157234 tacccgcccgaaccaaacctaatttgtcggttttccccgctttgacttggtttgggt 3157178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 10187994 - 10188078
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  10187994 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggt 10188078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 184 - 297
Target Start/End: Original strand, 5863298 - 5863424
Alignment:
Q  184 atggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt-----------ttttc 270  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||           |||||    
T  5863298 atggcaacaaaacccatacccgtggttacctgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttc 5863397  T
Q  271 cccgatttaaaaacacgggtatgggac 297  Q
    |||||||| ||||||||||||||||||    
T  5863398 cccgatttcaaaacacgggtatgggac 5863424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 30986427 - 30986343
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  30986427 catggcaacaaaacccatacccgtggttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactgagtttgggt 30986343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 3483837 - 3483921
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  3483837 catggcaacaaaacccatactcatggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggt 3483921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 31496608 - 31496524
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31496608 catggcaacaaaacccatacccgtggttacccgtccaaaccaaactcaatttgacgggttttccccgttttgactgggtttgggt 31496524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 31501994 - 31501910
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31501994 catggcaacaaaacccatacccgtggttacccgtccaaaccaaactcaatttgacgggttttccccgttttgactgggtttgggt 31501910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 32854018 - 32853936
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgg 263  Q
    ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  32854018 catggcaacaaaacccatacccgtggttatccgaccgaaccaaacccaatttgacgggttttctccgttttgactgggtttgg 32853936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 12141564 - 12141475
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  12141564 ctaggcatggcaacaaaacccatacctatggttacccgcccgaaccaaattcaatttgacgggttttccccgttttgactgggtttgggt 12141475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 27534858 - 27534774
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  27534858 catggcaacaaaacccatacccgtggttaaccgtccgaaccaaactcaatttgacgggttttccccgttttgattgggtttgggt 27534774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 14410782 - 14410896
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttcccgttttgactgggtttgggtttttccccgatttaaa 281  Q
    |||| |||||||||||||  ||||||||||||| || ||||||| | |||||||||| |||||||||||||||| |||||| | ||||||| ||||| ||    
T  14410782 catgacaacaaaacccatgtccgtggttacccgtccaaaccaaatctaatttgacggattttcccgttttgactaggtttgag-ttttcccagatttcaa 14410880  T
Q  282 aacacgggtatgggac 297  Q
    ||||||||||||||||    
T  14410881 aacacgggtatgggac 14410896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 2367500 - 2367416
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||| |||||||||    
T  2367500 catggcaacaaaacccatatccgtggttacccgtccgaaccaaacccaatttgatgggtttttcccgttttgactaggtttgggt 2367416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 278
Target Start/End: Complemental strand, 14034671 - 14034568
Alignment:
Q  176 atctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggtttttcccc 273  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||| ||| ||| ||||| ||||||| ||||||||||||||||||| | ||||||||    
T  14034671 atctaggcatggcaacaaaacccataaccgtggttacccacccgaactaaacccattttgatgggttttacccgttttgactgggtttgag-ttttcccc 14034573  T
Q  274 gattt 278  Q
    |||||    
T  14034572 gattt 14034568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 14506248 - 14506133
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcccg-ttttgactgggtttgggtttttccccgatttaa 280  Q
    |||| ||| ||||| |||||||||||||| ||  |||||| |||| |||||||||||||||||||  ||||||||||||||||||||| ||||||||| |    
T  14506248 catgacaataaaactcatacccgtggttaaccatccgaacgaaactcaatttgacgggttttccccattttgactgggtttgggtttt-ccccgatttca 14506150  T
Q  281 aaacacgggtatgggac 297  Q
    |||||| ||||||||||    
T  14506149 aaacacaggtatgggac 14506133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 24602782 - 24602893
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttccc-gttttgactgggtttgggtttttccccgatttaa 280  Q
    |||| |||||||| |||||| ||||||||||| ||||||| |||| ||||||||||| ||||||| |||||||||||||||||| ||||||| ||||| |    
T  24602782 catgacaacaaaatccatacacgtggttacccacccgaacgaaactcaatttgacggtttttccctgttttgactgggtttggg-ttttcccagatttca 24602880  T
Q  281 aaacacgggtatg 293  Q
    ||||| |||||||    
T  24602881 aaacatgggtatg 24602893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 10142432 - 10142516
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcc-cgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||  ||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  10142432 catggcaacaaaacccatacttgtggttatccgctcgaaccaaactcaatttggcgggttttcctcgttttgactgggtttgggt 10142516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 32053255 - 32053135
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaaccaatttgacgggtttt-cccgttttgactgggtttgggt-----ttttccccgat 276  Q
    ||||||||||||||||||||||  | ||| ||||| || | || ||||||||||||||||| ||||||||||||||||||||||     |||||||||||    
T  32053255 catggcaacaaaacccatacccacgtttatccgccggaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggttttccccgat 32053156  T
Q  277 ttaaaaacacgggtatgggac 297  Q
    || |||||| || ||||||||    
T  32053155 ttcaaaacatggatatgggac 32053135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 12309752 - 12309666
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaacca-aaccaatttgacgggtttt-cccgttttgactgggtttgggttt 267  Q
    |||| ||||||| |||||||||| |||||||||||||||||| | ||||||||||| ||||| ||| ||||||||||||||||||||    
T  12309752 catgacaacaaaccccatacccgcggttacccgcccgaaccagacccaatttgacgagttttccccattttgactgggtttgggttt 12309666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 24225878 - 24225792
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttccc-gttttgactgggtttgggttt 267  Q
    |||| ||||||||| ||||||| |||||||||| ||||||||||  ||||||||| ||||||||| ||||||| |||||||||||||    
T  24225878 catgacaacaaaactcatacccatggttacccgtccgaaccaaattcaatttgacaggttttccccgttttgattgggtttgggttt 24225792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 9402744 - 9402641
Alignment:
Q  189 aacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggtttttccccgatttaaaaacac 286  Q
    ||||| || |||||||  || ||||||||||||||||| ||||||||| || |||| |||| ||||||||| |||||| ||||||||||||| ||||||     
T  9402744 aacaatactcatacccacgggtacccgcccgaaccaaacccaatttgatggattttccccgctttgactggatttggg-ttttccccgatttcaaaacat 9402646  T
Q  287 gggta 291  Q
    |||||    
T  9402645 gggta 9402641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 12678008 - 12678092
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaaccaat-ttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    ||||||| |||| |||||| |||||||||||| || |||||||||| || | ||| ||||||| |||||||||||||||||||||    
T  12678008 catggcagcaaatcccataaccgtggttacccacctgaaccaaacctatctcgacaggttttcgccgttttgactgggtttgggt 12678092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 27738941 - 27738819
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt-----------ttttccccg 274  Q
    ||||||| ||||||| || ||||||| ||||||||||||  |||||||| ||| |||||||||||||||||||||| |||           |||||||||    
T  27738941 caacaaaccccatactcgcggttacctgcccgaaccaaattcaatttgatgggtttttcccgttttgactgggtttaggtatgggtatgggttttccccg 27738842  T
Q  275 atttaaaaacacgggtatgggac 297  Q
    |||| ||||||||||||||||||    
T  27738841 atttcaaaacacgggtatgggac 27738819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 15498494 - 15498367
Alignment:
Q  187 gcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttc-ccgttttgactgggtttgggt-----------ttttcccc 273  Q
    ||||||||| |||||| |  ||||| ||||||||| |||||| ||||| |||||||||| ||||||||| |||||||||||           ||||||||    
T  15498494 gcaacaaaatccatactcacggttatccgcccgaatcaaacccaatttaacgggttttctccgttttgaatgggtttgggtatggatatgggttttcccc 15498395  T
Q  274 gatttaaaaacacgggtatgggacaggt 301  Q
    ||||| |||||||||||||| |||||||    
T  15498394 gatttcaaaacacgggtatgagacaggt 15498367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 29199811 - 29199926
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacca-atttgacgggttttccc-gttttgactgggtttgggtttttccccgatttaa 280  Q
    ||||||||||||| |||| ||| | | ||||||||| |||||| ||  ||||||||| ||||||| | ||||| ||||||||| |||| ||||||||| |    
T  29199811 catggcaacaaaatccatgcccataggtacccgcccaaaccaaccccgatttgacggattttccccgatttgattgggtttggatttt-ccccgatttca 29199909  T
Q  281 aaacacgggtatgggac 297  Q
    ||| ||||||| |||||    
T  29199910 aaatacgggtacgggac 29199926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 34178249 - 34178333
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttccc-gttttgactgggtttgggt 265  Q
    |||||||| ||||| |||||||| || |||||||| |||||| ||| ||||||| |||| ||||| |||||||| ||||||||||    
T  34178249 catggcaataaaactcatacccgcgggtacccgcctgaaccatacccaatttgatgggtgttccccgttttgacagggtttgggt 34178333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 32959995 - 32959913
Alignment:
Q  210 tacccgcccgaaccaaacc-aatttgacgggttttcc-cgttttgactgggtttgggtttttccccgatttaaaaacacgggta 291  Q
    ||||| |||||| |||||| |||||||||| |||||| |||||||| |||||||||| |||||||  |||| ||||||||||||    
T  32959995 tacccacccgaatcaaacctaatttgacggattttcctcgttttgattgggtttggg-ttttccctaatttcaaaacacgggta 32959913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 14255125 - 14255047
Alignment:
Q  189 aacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcc-cgttttgactgggtttgggt 265  Q
    ||||||| |||||| ||||||||||| | |||| |||| ||| |||||| | |||||| ||||||||||||||||||||    
T  14255125 aacaaaatccatactcgtggttacccactcgaatcaaacccattttgacagattttcctcgttttgactgggtttgggt 14255047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 29341430 - 29341348
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttc-ccgttttgactgggtttgg 263  Q
    ||||||||||||||||||| ||| || ||| ||| |||| ||||| |||||||| | |||||| ||||||||| |||||||||    
T  29341430 catggcaacaaaacccatatccgcgggtactcgctcgaatcaaactcaatttgatgagttttctccgttttgattgggtttgg 29341348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 287
Target Start/End: Original strand, 7393822 - 7393918
Alignment:
Q  192 aaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcccg-ttttgactgggtttgggtttttccccgatttaaaaacacg 287  Q
    |||||||||||   ||||||| || ||||| |||| |||||||||||| |||||||  |||||| ||||||||| |||| ||||||||| ||||||||    
T  7393822 aaaacccatacatttggttacacgtccgaatcaaatccaatttgacggattttccccattttgattgggtttggatttt-ccccgatttcaaaacacg 7393918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 8320768 - 8320840
Alignment:
Q  229 aatttgacgggttttccc-gttttgactgggtttgggtttttccccgatttaaaaacacgggtatgggacaggt 301  Q
    |||||||||| ||||||| | ||||||| |||||||||||| |||| |||| |||||||||||| || ||||||    
T  8320768 aatttgacggattttccccgctttgactaggtttgggtttt-ccccaatttcaaaacacgggtacggaacaggt 8320840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 28079610 - 28079694
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggt-tttcccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||||||| || ||||| |||  |||||| ||| |||||||||| ||||||| |||| ||| ||||||||    
T  28079610 catgacaacaaaacccatacccgcgggtacccacccataccaaacccattttgacgggtatttcccgctttggctgagtttgggt 28079694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 178 - 301
Target Start/End: Complemental strand, 12447547 - 12447424
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcccgttttgactgggtttgggtttttccccgat 276  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||| ||||||||||||||||| ||||||  |||    
T  12447547 ctaggcatggcaacaaaacccatacccgtggttacccacccgaaccaaacccaatttgacggatttccccattttgactgggtttggg-ttttccttgat 12447449  T
Q  277 ttaaaaacacgggtatgggacaggt 301  Q
    |  ||||||| ||||||||||||||    
T  12447448 tgtaaaacacaggtatgggacaggt 12447424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 4921005 - 4920918
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgg 263  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  4921005 ctaggcatggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttctccgttttgactgggtttgg 4920918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 22694817 - 22694901
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgg-gttttcccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||||||||    
T  22694817 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacggaattttcccgttttaactgggtttgggt 22694901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 20973411 - 20973493
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaaccaatt-tgacgggtttt-cccgttttgactgggtttgg 263  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  20973411 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccattctgacgggttttccccgttttgactgggtttgg 20973493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 33727916 - 33727998
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgg 263  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||||    
T  33727916 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacggattttccccgttttgattgggtttgg 33727998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 10127248 - 10127164
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  10127248 catgacaacaaaatccatacccgtggttatccgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgggt 10127164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 29245866 - 29245950
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  29245866 catgacaacaaaacccatacccgcggttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactaggtttgggt 29245950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 38006396 - 38006511
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggtttttccccgatttaa 280  Q
    ||||||||||||||| ||||| || ||||||||||| ||||||| || ||||||||||||||| || ||||||||||||||||| |||||||| |||| |    
T  38006396 catggcaacaaaacctatacctgttgttacccgccctaaccaaatccgatttgacgggttttctccattttgactgggtttggg-ttttccccaatttca 38006494  T
Q  281 aaacacgggtatgggac 297  Q
    ||| |||||||||||||    
T  38006495 aaatacgggtatgggac 38006511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 40517980 - 40517896
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgg-gttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||  ||||||||||||||||||||||||||    
T  40517980 catggcaacaaaacccatacccgtggttacccgcctgaaccaaattcaatttgacggatttttcccgttttgactgggtttgggt 40517896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 3564650 - 3564737
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcccgttttgactgggtttgggt 265  Q
    |||| |||| |||||||| |||||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3564650 ctagacatgacaacaaaatccatactcgcggtt-cccgcccgaaccaaatccaatttgacgggttttcccgttttgactgggtttgggt 3564737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 5908603 - 5908687
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||    
T  5908603 catggcaacaaaatccatacccgtggttatccgcccgaaccaaacccaatttgacgggttttccccattttgattgggtttgggt 5908687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 13401919 - 13402003
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgg-gttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |||| ||||||||||| |||||||||    
T  13401919 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacggattttttccgttttgactaggtttgggt 13402003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 18207192 - 18207109
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacg-ggttttcccgttttgactgggtttggg 264  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||| | |||||||||||||||||||||||||    
T  18207192 catggcaacaaaactcatacccgtggttacccacccaaaccaaacccaatttgacgtgtttttcccgttttgactgggtttggg 18207109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 12866468 - 12866550
Alignment:
Q  185 tggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  12866468 tggcaacaaaacccatacatgtggttacccgtccgaaccaaatccaatttgacgggttttccccattttgactgggtttgggt 12866550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 15890380 - 15890298
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgg 263  Q
    |||| ||||||||||||||| || |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||    
T  15890380 catgacaacaaaacccatactcgcggttacccgcccgaaccaaatccaatttgacgggtttttcccgttttgactaggtttgg 15890298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 17853203 - 17853292
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||| |||||||| |||||||| || |||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  17853203 ctaggcatggcaacaaaacgcatacccgcggttacccacctgaaccaaacctaatttgacgggttttccccgttttgattgggtttgggt 17853292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 1218899 - 1218815
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacg-ggttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||| | |||| || ||||||||||||||||||    
T  1218899 catggcaacaaaacccatacccgcggttacccgctcgaaccaaatccaatttgacgagttttttccattttgactgggtttgggt 1218815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 12834490 - 12834573
Alignment:
Q  184 atggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| ||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  12834490 atggtaacaaaacccatacatgtggttacccgtccgaaccaaactcaatttgacgggttttccccattttgactgggtttgggt 12834573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 30996769 - 30996686
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||| |   ||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  30996769 catggcaacaaaacccatatctacggttatccgtccgaaccaaacccaatttgacggattttcccgttttgactgggtttgggt 30996686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 4583293 - 4583211
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgg 263  Q
    |||||||||||||| |||| ||  |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  4583293 catggcaacaaaactcatatccacggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgg 4583211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 291
Target Start/End: Complemental strand, 6810320 - 6810211
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgg-gttttcccgttttgactgggtttgggtttttccccgatttaa 280  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||| |||||||||||  |||| ||| ||||| || ||||||| ||||||||||||| |    
T  6810320 catggcaacaaaacccatatccgtggatacccgtccgaaccaaactcaatttgacggattttttccgctttgaatgagtttggg-ttttccccgatttta 6810222  T
Q  281 aaacacgggta 291  Q
     ||||||||||    
T  6810221 gaacacgggta 6810211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 42717551 - 42717629
Alignment:
Q  189 aacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    |||||||| |||||| ||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  42717551 aacaaaactcatacctgtggttacccgtccgaaccaaacccaatttgacgggtttttcccgttttgactggatttgggt 42717629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 35311992 - 35311869
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgg-gttttcccgttttgactgggtttgggttt--ttcccc 273  Q
    |||| |||| ||| ||||| |||| ||| |||||||||||||||||||| ||||||||||||  |||| |||||||||||| |||||||| |   |  ||    
T  35311992 ctaggcatgacaataaaactcatatccgcggttacccgcccgaaccaaacccaatttgacggattttttccgttttgactgagtttgggtatggatatcc 35311893  T
Q  274 gatttaaaaacacgggtatgggac 297  Q
    ||||| ||||||||||||||||||    
T  35311892 gatttcaaaacacgggtatgggac 35311869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 6092449 - 6092528
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||| |||||||  ||||||||||||||||||||  |||||| ||||||||| |||||||||| |||||||||||    
T  6092449 caacaaaactcataccctaggttacccgcccgaaccaaattcaatttaacgggttttccccgttttgattgggtttgggt 6092528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 297
Target Start/End: Original strand, 35193917 - 35194031
Alignment:
Q  184 atggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgg-gttttcccgttttgactgggtttgggtttttccccgatttaaa 281  Q
    ||||||||||||| ||||| ||||||||||||||| || |||| ||||||||||||  |||| |||||||| |||| |||||| | ||| | | ||| ||    
T  35193917 atggcaacaaaactcatactcgtggttacccgcccaaatcaaacccaatttgacggattttttccgttttggctggatttggg-tattctctgtttttaa 35194015  T
Q  282 aacacgggtatgggac 297  Q
    ||||||||||||||||    
T  35194016 aacacgggtatgggac 35194031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 301
Target Start/End: Complemental strand, 12457679 - 12457560
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttccc-gttttgactgggtttgggtttttccccgatttaa 280  Q
    ||||||||| |||||| |||||  |  ||| |||||| |||||||| ||||||||||| |||||| | ||||| |||||||||| ||| || |||||| |    
T  12457679 catggcaaccaaacccgtaccctcgagtactcgcccgtaccaaacccaatttgacggggtttccccgctttgattgggtttggggttt-cctcgatttca 12457581  T
Q  281 aaacacgggtatgggacaggt 301  Q
    ||| |||||||||||||||||    
T  12457580 aaatacgggtatgggacaggt 12457560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 24207857 - 24207774
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaaccaa-tttgacgggttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||| ||||||||| || ||||| |||||||||||| || |||||||  |||||||| ||||| || ||||||||    
T  24207857 catggcaacaaaatccatacccgcgggtacccacccgaaccaaactaagtttgacgatttttcccgctttgattgagtttgggt 24207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 27088288 - 27088370
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||| ||||||||||| ||| || |||||||||||| || |||||| ||||| |||||||| ||| |||||||||    
T  27088288 catggcaacaaaatccatacccgtgattatccacccgaaccaaactcattttgac-ggtttccccgttttaactaggtttgggt 27088370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 40187572 - 40187654
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcc-cgttttgactgggtttgg 263  Q
    ||||||| |||||| |||||| | || |||||| ||||||||||| || ||||||||||||||| || |||||||||||||||    
T  40187572 catggcagcaaaactcatacctgcgggtacccgtccgaaccaaactcattttgacgggttttcctcgctttgactgggtttgg 40187654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 6155835 - 6155966
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt-----------tttt 269  Q
    |||||||||||||| |||||| | ||||| || |||| |||||| | ||||| ||||||||||  ||||||||||||||||||||           ||||    
T  6155835 catggcaacaaaactcatacctgcggttatccacccgtaccaaatcaaatttaacgggttttcttcgttttgactgggtttgggtatgtgtttgggtttt 6155934  T
Q  270 ccccgatttaaaaacacgggtatgggacaggt 301  Q
    ||||||||| ||||||||||||| ||||||||    
T  6155935 ccccgatttcaaaacacgggtataggacaggt 6155966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 10822501 - 10822568
Alignment:
Q  230 atttgacgggttttcccg-ttttgactgggtttgggtttttccccgatttaaaaacacgggtatgggac 297  Q
    |||||||||||||||||  |||||||||| |||||||||| | ||||||| ||||||||||||| ||||    
T  10822501 atttgacgggttttccccattttgactggatttgggtttt-ctccgatttcaaaacacgggtataggac 10822568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 18451838 - 18451902
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttccc 246  Q
    |||| ||||||||||||||| ||||| | |||| |||||||||| ||| ||||||||||||||||    
T  18451838 catgacaacaaaacccatacacgtgggttcccgtccgaaccaaacccagtttgacgggttttccc 18451902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 42987395 - 42987478
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||  |||||| | ||| ||||||||||  ||||||| |||||||| ||||||||||||| ||||||||    
T  42987395 catggcaacaaaacccatattcgtggt-atccgtccgaaccaaattcaatttggcgggtttttcccgttttgactgagtttgggt 42987478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 2681396 - 2681307
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttggg 264  Q
    ||||| |||||||||||||| | | ||| ||| |||||| || |||||| | |||||||||||||||| |||| |||||||| |||||||    
T  2681396 tctaggcatggcaacaaaactcgtgcccatgggtacccgtccaaaccaacctcaatttgacgggttttccccgatttgactgagtttggg 2681307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 8453349 - 8453414
Alignment:
Q  228 caatttgacgggttttcccgttttgactgggtttgggtttttccccgatttaaaaacacgggtatggga 296  Q
    |||||||| |||||| || |||||||| ||||||||| |||  |||||||| |||||||||||||||||    
T  8453349 caatttgatgggtttccctgttttgac-gggtttgggcttt--cccgatttcaaaacacgggtatggga 8453414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 28568936 - 28569020
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttccc-gttttgactgggtttgggt 265  Q
    ||||||||||||||||||   ||||| || |||||| |||||  | | ||||||||||||||||| | |||||||||||||||||    
T  28568936 catggcaacaaaacccatgttcgtgggtagccgcccaaaccatcctcgatttgacgggttttccctgatttgactgggtttgggt 28569020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 6e-31; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 7469692 - 7469776
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  7469692 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggt 7469776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 184 - 297
Target Start/End: Complemental strand, 49025841 - 49025727
Alignment:
Q  184 atggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggtttttccccgatttaaa 281  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||||||||| ||| |||||| |||||||||||||||||| ||||||||||| | ||    
T  49025841 atggcaacaaaatccatacccgtggttacccgcctgaaccaaacccaatttgatgggtttttcctgttttgactgggtttggg-ttttccccgatctcaa 49025743  T
Q  282 aacacgggtatgggac 297  Q
    ||||||||||||||||    
T  49025742 aacacgggtatgggac 49025727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 29284510 - 29284426
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  29284510 catggcaacaaaactcatacccgtggttacccgcccgaaccaaacccaatttgacgggttttctccgttttgactgggtttgggt 29284426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 39655187 - 39655271
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||    
T  39655187 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggt 39655271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 23546862 - 23546983
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt-----ttttccccga 275  Q
    ||||||||||||||||||||||||||||||||||  |||||||| ||||||| ||||||||| ||||||||||||||||||||||     ||||||||||    
T  23546862 catggcaacaaaacccatacccgtggttacccgcatgaaccaaacccaatttaacgggttttccccgttttgactgggtttgggtatgggttttccccga 23546961  T
Q  276 tttaaaaacacgggtatgggac 297  Q
    | |  |||||||||||||||||    
T  23546962 tctcgaaacacgggtatgggac 23546983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 29858489 - 29858573
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||    
T  29858489 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttaacggattttccccgttttgactgggtttgggt 29858573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 39728845 - 39728761
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  39728845 catggcaacaaaacccatacccgtggttacccgtccgaaccaaatccaatttgacggattttccccgttttgactgggtttgggt 39728761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 49580238 - 49580154
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  49580238 catgacaacaaaacccatacccgtggttatccgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgggt 49580154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 44953344 - 44953435
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggttt 267  Q
    |||| |||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  44953344 ctaggcatggcaacaaaattcatacccgtggttacccgctcgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggttt 44953435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 4015952 - 4016042
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||| |||||||||||||||| |||||||||    
T  4015952 tctaggcatggcaacaaaacccatacccgtggttacccacccgaacgaaactcaatttgacgggtttttcccgttttgactaggtttgggt 4016042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 10371187 - 10371273
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggttt 267  Q
    |||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  10371187 catgacaacaaaacccagacccgtggttacccgctcgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggttt 10371273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 42758553 - 42758464
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||    
T  42758553 ctaggcatggcaacaaaacccatacccgtggttacccgcccgatccaaacccaatttgacggattttccccgttttaactgggtttgggt 42758464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 44106702 - 44106791
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcccgttttgactgggtttgggt 265  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||||    
T  44106702 tctaggcatggcaacaaaacacatacccgtgattacccgcccgaacaaaactcaatttgacggttttccccgttttgactgggtttgggt 44106791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 54317318 - 54317237
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttg 262  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  54317318 catggcaacaaaatccatatccgtggttacccgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttg 54317237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 6738319 - 6738403
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgac-gggttttcccgttttgactgggtttgggt 265  Q
    |||||||| |||||||||||||| |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  6738319 catggcaataaaacccatacccgcggttacccgcccgaaccaaacccaatttgacaggtttttcccgttttgactgggtttgggt 6738403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 22535755 - 22535839
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  22535755 catggcaacaaaacccatacccgcggttatccgcccgaaccaaactcaatttgatgggttttccccgttttgactgggtttgggt 22535839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 44252921 - 44252837
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||||||    
T  44252921 catggcaacaaaatccatacccgtggttacccgtccgaatcaaaccaaatttgacgggttttccccgttttgactgggtttgggt 44252837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 52572783 - 52572699
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  52572783 catggcaacaaaacccatacccgtggttatccgcccgaaccaaactcaatttgacaggttttccccattttgactgggtttgggt 52572699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 34026128 - 34026046
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaacc-aaaccaatttgacgg-gttttcccgttttgactgggtttgg 263  Q
    ||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  34026128 catggcaacaaaacccatacccgcggttaccctcccgaaccaaaaccaatttgacggttttttcccgttttgactgggtttgg 34026046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 48390731 - 48390858
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt-----------tttt 269  Q
    ||||||||||||||||||||||| |||||||||  ||||||||| |||||||||||| |||| ||||||||||||||||||||||           ||||    
T  48390731 catggcaacaaaacccatacccgcggttacccgttcgaaccaaatccaatttgacggattttccccgttttgactgggtttgggtatgggtatgggtttt 48390830  T
Q  270 ccccgatttaaaaacacgggtatgggac 297  Q
    ||||||||| ||||||||||||||||||    
T  48390831 ccccgatttcaaaacacgggtatgggac 48390858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 4557219 - 4557303
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    |||| ||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  4557219 catgacaacaaaactcatacccgtggttacccacccgaacaaaacccaatttgacgggtttttcccgttttgactgggtttgggt 4557303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 831171 - 831092
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  831171 caacaaaactcatatccgtggttacccgcccaaaccaaaccaaatttgacgggttttccccgttttgactgggtttgggt 831092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 1337205 - 1337087
Alignment:
Q  183 catggcaacaaaacccatacccgtggtta----cccgcccgaaccaaaccaattt-gacgggttttcccgttttgactgggtttgggtttttccccgatt 277  Q
    |||||||||||||||||||||||||||||    |||||| |||| ||||| |||| ||||| ||| ||||||||||||||||||||| ||||| ||||||    
T  1337205 catggcaacaaaacccatacccgtggttaattacccgcctgaactaaacccattttgacggatttccccgttttgactgggtttggg-ttttcaccgatt 1337107  T
Q  278 taaaaacacgggtatgggac 297  Q
    | |||||| | |||||||||    
T  1337106 tcaaaacaagtgtatgggac 1337087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 43582747 - 43582670
Alignment:
Q  187 gcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttg 262  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||    
T  43582747 gcaacaaaacccatatccgcggttacccgcccgaaccaaatccaatttgatgggttttctccgtttttactgggtttg 43582670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 44639448 - 44639364
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||| |||| ||||||||||||| |||||| ||| |||||||||| |||||| ||| ||||||||||||||||||    
T  44639448 catggcaacaaaactcatatccgtggttacccgtccgaacgaaacccaatttgactggttttccccattttgactgggtttgggt 44639364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 48305555 - 48305637
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgg 263  Q
    |||| |||||||| ||||||||| |||||||| ||||||||||| ||||| ||||||||||| ||| ||||||||||||||||    
T  48305555 catgacaacaaaatccatacccgcggttacccacccgaaccaaacccaatctgacgggttttccccattttgactgggtttgg 48305637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 20087178 - 20087089
Alignment:
Q  176 atctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgg 263  Q
    |||||| ||||||||||||| ||||||| | ||||||| ||  |||||||| |||||||||||| ||||| |||||||||||||||||||    
T  20087178 atctaggcatggcaacaaaatccataccagcggttacctgctggaaccaaatccaatttgacggattttctccgttttgactgggtttgg 20087089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 12369168 - 12369104
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttccc 246  Q
    |||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| |||||||    
T  12369168 catggcaacaaaacccatacccgtggttattcacccgaaccaaactcaatttgacggattttccc 12369104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 23153979 - 23154063
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaa-accaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||| ||||| ||| ||||||||||| |||||||  ||||||||||||| |||||||||||| |||| ||||||||    
T  23153979 catggcaacaaaatccatatccgcggttacccgccggaaccaaccccaatttgacgggtttttcccgttttaactgagtttgggt 23154063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 10823616 - 10823733
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacg-ggttttcccgttttgactgggtttgggt-----ttttccccga 275  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||  |||||||||| | |||| || |||||||| |||||||||     ||||| ||||    
T  10823616 catggcaacaaaactcatacccgtcgttacccgcccaaaccaaattcaatttgacgagttttttccattttgactaggtttgggtatgggttttctccga 10823715  T
Q  276 tttaaaaacacgggtatg 293  Q
    | | ||||||||||||||    
T  10823716 tctcaaaacacgggtatg 10823733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 23581001 - 23580917
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| ||||||||| |||||| | ||||||| |||||||  |||  |||||||||||||||| ||||||||||||||||||||||    
T  23581001 catgacaacaaaacacatacctgcggttacctgcccgaattaaattcaatttgacgggtttttcccgttttgactgggtttgggt 23580917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 31271208 - 31271296
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttggg 264  Q
    |||| ||||||||| |||||| |||||| || |||||| ||||| ||||| ||||||||||| |||| |||| ||||||||||||||||    
T  31271208 ctaggcatggcaaccaaacccgtacccgcgggtacccgtccgaatcaaactcaatttgacggatttttcccgctttgactgggtttggg 31271296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 31126746 - 31126829
Alignment:
Q  184 atggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||| |||||||| || ||||||||||||  || |||| ||||||| |||||||||| | |||||||||    
T  31126746 atggcaacaaaacccatacacgtggttaaccacccgaaccaaacttaaattgatgggttttccccgttttgatttggtttgggt 31126829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 53632078 - 53632000
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcc-cgttttgactgggt 259  Q
    |||||||| ||||| ||||||||||||||| ||  ||||||||||  ||||||||||||||||| |||||||| |||||    
T  53632078 catggcaataaaactcatacccgtggttactcgttcgaaccaaacttaatttgacgggttttcctcgttttgaatgggt 53632000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 34119826 - 34119746
Alignment:
Q  187 gcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||| |  ||||||| || ||||||||||| | ||||||||||||||| ||| |||||| |||||||||||    
T  34119826 gcaacaaaacccatccatgtggttaaccacccgaaccaaatctaatttgacgggttttccccattttgattgggtttgggt 34119746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 52198304 - 52198245
Alignment:
Q  208 gttacccgcccgaaccaaacc-aatttgacgggttttccc-gttttgactgggtttgggt 265  Q
    ||||||||||| ||||||||| |||||||||||||||  | |||||||||||||||||||    
T  52198304 gttacccgcccaaaccaaacctaatttgacgggttttttctgttttgactgggtttgggt 52198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 301
Target Start/End: Original strand, 55438787 - 55438822
Alignment:
Q  266 ttttccccgatttaaaaacacgggtatgggacaggt 301  Q
    |||||||| |||||||||||||||||||||||||||    
T  55438787 ttttccccaatttaaaaacacgggtatgggacaggt 55438822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 44172768 - 44172735
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgc 216  Q
    |||||||||||||||||||||| |||||||||||    
T  44172768 catggcaacaaaacccatacccatggttacccgc 44172735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 44179468 - 44179435
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgc 216  Q
    |||||||||||||||||||||| |||||||||||    
T  44179468 catggcaacaaaacccatacccatggttacccgc 44179435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 17146068 - 17146140
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcccgttttgac 254  Q
    |||| ||| ||||||||||   ||||| ||||| || ||||||| |||||||||||||||| |||||||||||    
T  17146068 catgacaataaaacccatatatgtggtcacccgtccaaaccaaatccaatttgacgggtttccccgttttgac 17146140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 19111908 - 19111824
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| ||||||||| |||| |||||||||| | ||  ||||||| |||||||||||| |||| ||| |||||| |||||||||||    
T  19111908 catgacaacaaaactcatatccgtggttactcacctaaaccaaatccaatttgacggatttttccctttttgattgggtttgggt 19111824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 23910171 - 23910247
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaa-ccaaaccaatttgacgg-gttttcccgttttgactgggtttg 262  Q
    ||||||||||||||| |||||||||| | ||||| | ||  |||||||||||  |||| ||||||||||||||||||    
T  23910171 caacaaaacccatactcgtggttacctgtccgaatcgaattcaatttgacggattttttccgttttgactgggtttg 23910247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 42243525 - 42243477
Alignment:
Q  219 gaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  42243525 gaaccaaacccaatttgacgggttttccccggtttgactgggtttgggt 42243477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 30847121 - 30847037
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  30847121 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggt 30847037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 6027815 - 6027926
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggtttttccccgatttaa 280  Q
    |||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |    
T  6027815 catgacaacaaaacccatactcgtggttatccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttggg-ttttccccgatttta 6027913  T
Q  281 aaacacgggtatg 293  Q
    ||||| |||||||    
T  6027914 aaacatgggtatg 6027926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 42797908 - 42797995
Alignment:
Q  176 atctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcccgttttgactgggtttg 262  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||    
T  42797908 atctaggcatggcaacaaaacccatacccgtggttacccgcccgaaccaaatctaatttgacgggtttttctgttttgactgggtttg 42797995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 9632561 - 9632480
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacggg-ttttcccgttttgactgggtttg 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  9632561 catggcaacaaaacccatacccgtggttacccgcccgaaccaaactcaatttgacgggtttttcccgttttgaatgggtttg 9632480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 10920813 - 10920729
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||| ||||||||||||||||||||||    
T  10920813 catggcaacaaaacccatacccgtggttacccgcccgaaccaaatccaatttgataggttttccccgttttgactgggtttgggt 10920729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 24414046 - 24414130
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||    
T  24414046 catggcaacaaaacccatacctgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggt 24414130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 13830905 - 13830826
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  13830905 caacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccattttgactgggtttgggt 13830826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 37472673 - 37472800
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt-----------tttt 269  Q
    ||||| |||||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||           ||||    
T  37472673 catggtaacaaaacccatacccgcagttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgagtatggatttt 37472772  T
Q  270 ccccgatttaaaaacacgggtatgggac 297  Q
    ||||||||| ||||||||||||||||||    
T  37472773 ccccgatttcaaaacacgggtatgggac 37472800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 36128020 - 36128104
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  36128020 catggcaacaaaacccatacccgtggttactcgtccgaaccaaacctaatttgacggattttccccgttttgactgggtttgggt 36128104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 31942104 - 31942181
Alignment:
Q  188 caacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacggg-ttttcccgttttgactgggtttgg 263  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||| |||||||| |||||||||||||||    
T  31942104 caacaaaacccatacccgtggttacccgcccaaaccaaactcaatttgatgggtttttcccgctttgactgggtttgg 31942181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 37106867 - 37106740
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt-----------tttt 269  Q
    |||| ||||||||| ||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||           ||||    
T  37106867 catgacaacaaaactcatactcgcggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgagtttgggtatgggtatgggtttt 37106768  T
Q  270 ccccgatttaaaaacacgggtatgggac 297  Q
    ||||||||| ||||||||||||||||||    
T  37106767 ccccgatttcaaaacacgggtatgggac 37106740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 12341775 - 12341691
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||| |||||||| ||||| ||| |||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  12341775 catggcaacaaaactcatacccgcggttatccgtccgaaccaaacccaatttgacgggttttccccgttttgactgagtttgggt 12341691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 13705269 - 13705353
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaacca-aaccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||| ||||||| |||||||||| |||||||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  13705269 catggcaacaaaactcatacccatggttacccgtccgaaccatacccaatttgacgggttttccccgttttgacagggtttgggt 13705353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 10208345 - 10208428
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcccgttttgactgggtttgggt 265  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||   |||||||||| ||| ||||||||||||||||||||||    
T  10208345 catggcaacaaaactcatacccgtgattatccgcccgaaccaaagttaatttgacggttttccccgttttgactgggtttgggt 10208428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 37999652 - 37999535
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttt-tcccgttttgactgggtttgggt-----ttttccccga 275  Q
    ||||||||||||||||||| |||||||||  |||||||||||||  |||||||||||||||  ||| |||||||||||| |||||     ||||||||||    
T  37999652 catggcaacaaaacccatatccgtggttagtcgcccgaaccaaattcaatttgacgggtttcccccattttgactgggtatgggtatgggttttccccga 37999553  T
Q  276 tttaaaaacacgggtatg 293  Q
    | | ||||||||||||||    
T  37999552 tctcaaaacacgggtatg 37999535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 265
Target Start/End: Original strand, 12193733 - 12193825
Alignment:
Q  176 atctagccatggcaacaaaacccatacccgtg-gttacccgcccgaaccaaa-ccaatttgacgggttttcccg-ttttgactgggtttgggt 265  Q
    |||||| ||||||||||||| ||||||||| | ||||||| ||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  12193733 atctaggcatggcaacaaaaaccatacccgcgcgttacccacccgagccaaacccaatttgacgggtttttccgattttgactgggtttgggt 12193825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 286
Target Start/End: Original strand, 35409094 - 35409197
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcccgttttgactgggtttgggtttttccccgatttaaa 281  Q
    |||||||||||||||||||| |  || ||||||||||||||||| | |||||||||  ||  | ||||||||||||||||||| ||||||||||||| ||    
T  35409094 catggcaacaaaacccatacacacgggtacccgcccgaaccaaatcaaatttgacgatttaacacgttttgactgggtttggg-ttttccccgatttcaa 35409192  T
Q  282 aacac 286  Q
    |||||    
T  35409193 aacac 35409197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 45115726 - 45115651
Alignment:
Q  192 aaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttccc-gttttgactgggtttgggt 265  Q
    |||||||||||||| ||||||  | |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  45115726 aaaacccatacccgcggttacttgtccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgggt 45115651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 8915853 - 8915934
Alignment:
Q  184 atggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgg-gttttcccgttttgactgggtttgg 263  Q
    |||||||||||||||||||| ||||||| |||||| || ||||  |||||||||||  ||||||||||||||||| ||||||    
T  8915853 atggcaacaaaacccatacctgtggttatccgcccaaatcaaattcaatttgacggatttttcccgttttgactgagtttgg 8915934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 25214016 - 25213952
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttccc 246  Q
    ||||||||||||||||||| ||  || ||||| ||||||||||| ||||||||||||||||||||    
T  25214016 catggcaacaaaacccatatccacgggtacccacccgaaccaaatccaatttgacgggttttccc 25213952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 44746023 - 44746107
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||| |||| ||  |||||||| |||| |||||| ||||||||||||||||| |||||||||| || ||||||||    
T  44746023 catggcaacaaaactcatatccacggttacccacccgtaccaaacccaatttgacgggttttccccgttttgattgagtttgggt 44746107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 7314586 - 7314644
Alignment:
Q  207 ggttacccgcccgaaccaaac-caatttgacgggttttccc-gttttgactgggtttgg 263  Q
    ||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  7314586 ggttaaccgcccgaaccaaactcaatttgacggattttccccgttttgactgggtttgg 7314644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 35965465 - 35965385
Alignment:
Q  215 gcccgaaccaaaccaattt-gacgggttttc-ccgttttgactgggtttgggtttttccccgatttaaaaacacgggtatgg 294  Q
    |||||||||||||| |||| ||| ||||||| ||| ||||| |||||||| ||||| ||||||||| |||||||||||||||    
T  35965465 gcccgaaccaaacctattttgactggttttctccgctttgattgggtttgagtttt-ccccgatttcaaaacacgggtatgg 35965385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 18106032 - 18106115
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caa-tttgacgggtttt-cccgttttgactgggtttgg 263  Q
    |||| ||||||||| ||||   ||||||||||||||||| ||||| ||| |||||||| |||| ||||||||||||||||||||    
T  18106032 catgacaacaaaactcatatatgtggttacccgcccgaatcaaactcaattttgacggattttccccgttttgactgggtttgg 18106115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 15546833 - 15546792
Alignment:
Q  255 tgggtttgggtttttccccgatttaaaaacacgggtatgggac 297  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  15546833 tgggtttgggtttt-ccccgatttcaaaacacgggtatgggac 15546792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 22900883 - 22900842
Alignment:
Q  255 tgggtttgggtttttccccgatttaaaaacacgggtatgggac 297  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  22900883 tgggtttgggtttttccc-gatttcaaaacacgggtatgggac 22900842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 14331696 - 14331575
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaacca-aaccaatttgacgggtttt-cccgttttgactgggtttgggt-----ttttccccga 275  Q
    |||||||||||||||| | ||| ||| ||||| ||| |||||   || |||||||||||||| |||| ||||||| |||||||||     |||||||| |    
T  14331696 catggcaacaaaacccgtgcccatgggtacccacccaaaccagctccgatttgacgggttttccccggtttgactaggtttgggtatgggttttccccta 14331597  T
Q  276 tttaaaaacacgggtatgggac 297  Q
    |||||||| || ||||||||||    
T  14331596 tttaaaaatacaggtatgggac 14331575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 19104751 - 19104835
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||| ||||  |||||||||   ||||| |||| ||||||||| ||| |||| ||||||||| |||||||||||    
T  19104751 catggcaacaaaacctatacatgtggttaccaatccgaatcaaacccaatttgatgggttttttccgttttgattgggtttgggt 19104835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 26755915 - 26755831
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacca-atttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| ||||||||||| | ||| ||| |||| |||| |||||| ||  |||||||||||||| |||| |||||||||||||||||    
T  26755915 catgacaacaaaacccgtgcccatgggtacctgcccaaaccaaccccgatttgacgggtttttcccgatttgactgggtttgggt 26755831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 13390571 - 13390488
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  13390571 catggcaacaaaacccatacccacggttacccgcccgaaccaaacccaatttgacgggtttccccgttttgactgggtttgggt 13390488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 20774746 - 20774657
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  20774746 ctaggcatggcaacaaaacccatactcgtggttacccgcccgaaccaaacccaatttgacggattttccccgttttgactgggtttgggt 20774657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 36187134 - 36187218
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  36187134 catggcaacaaaacccatacccgtcgttacccgcccgaaccaaactcaatttggcgggttttccccgttttgactgggtttgggt 36187218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 297
Target Start/End: Original strand, 3627906 - 3628026
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacg-ggttttcccgttttgactgggtttgggtttttccccga 275  Q
    |||| |||| ||||||||| ||||| || ||||||||||||||||||||| |||||||| | | |||||||||||||||||||| | || ||||||||||    
T  3627906 ctaggcatgacaacaaaactcatacacgcggttacccgcccgaaccaaactcaatttgatgagtttttcccgttttgactgggtatagg-ttttccccga 3628004  T
Q  276 tttaaaaacacgggtatgggac 297  Q
    ||| ||||||||||||||||||    
T  3628005 tttcaaaacacgggtatgggac 3628026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 17135127 - 17135038
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||| | |||||||||||||||||||    
T  17135127 ctaggcatggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacggattttctctgttttgactgggtttgggt 17135038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 19572426 - 19572557
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggtttt-cccgttttgactgggtttgggt-----------tttt 269  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||           ||||    
T  19572426 catggcaacaaaacccatacttgtggttacccgcccgaaccaaacctaatttgacgggttttccccattttgactgggtttgggtatgggtatgggtttt 19572525  T
Q  270 ccccgatttaaaaacacgggtatgggacaggt 301  Q
     |||||||| ||||||||||||||||||||||    
T  19572526 tcccgatttcaaaacacgggtatgggacaggt 19572557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 24236670 - 24236755
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacggg-ttttcccgttttgactgggttt 261  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  24236670 ctaggcatggcaacaaaactcatacccatggttacccgcccgaaccaaactcaatttgacgggtttttcccgttttgactgggttt 24236755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 29936602 - 29936513
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||||    
T  29936602 ctaggcatgacaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactaagtttgggt 29936513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 44615389 - 44615516
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacggg-ttttcccgttttgactgggtttgggt-----------tttt 269  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||| ||||||||||||||||||||||||||           ||||    
T  44615389 catggcaacaaaacccatacccgtggttacccacccagaccaaactcaatttgacgggtttttcccgttttgactgggtttgggtatgagtttgggtttt 44615488  T
Q  270 ccccgatttaaaaacacgggtatgggac 297  Q
    ||| ||||||||||||||||||||||||    
T  44615489 ccctgatttaaaaacacgggtatgggac 44615516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 44793180 - 44793053
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacggg-ttttcccgttttgactgggtttgggt-----------tttt 269  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||| ||||||||||||||||||||||||||           ||||    
T  44793180 catggcaacaaaacccatacccgtggttacccacccagaccaaactcaatttgacgggtttttcccgttttgactgggtttgggtatgagtttgggtttt 44793081  T
Q  270 ccccgatttaaaaacacgggtatgggac 297  Q
    ||| ||||||||||||||||||||||||    
T  44793080 ccctgatttaaaaacacgggtatgggac 44793053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 5181219 - 5181134
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggttt 261  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||    
T  5181219 ctaggcatggcaacaaaacccatacccgcggttacccgcccgaaccaaattcaatttgacgggttttccccattttgactgggttt 5181134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 23490685 - 23490769
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    |||||||||||||||||||| | | ||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  23490685 catggcaacaaaacccatactcatagttacccgcccgaaccaaatccaatttgacgggtttttcctgttttgactgggtttgggt 23490769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 23968754 - 23968670
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||| |||||| |||||||||||    
T  23968754 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacggattttccccattttgattgggtttgggt 23968670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 301
Target Start/End: Original strand, 45866094 - 45866230
Alignment:
Q  177 tctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttcccgttttgactgggtttgggt---------- 265  Q
    ||||| |||||||||||||||||||| || |||||||||||||| ||||||| || ||||||||||||| | |||||||| |||||||||              
T  45866094 tctaggcatggcaacaaaacccatactcgcggttacccgcccgagccaaacctaaattgacgggttttctccttttgactaggtttgggtatgggtatgg 45866193  T
Q  266 -ttttccccgatttaaaaacacgggtatgggacaggt 301  Q
     ||||||||||||| |||||||||||||| |||||||    
T  45866194 gttttccccgatttcaaaacacgggtatgagacaggt 45866230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 9982804 - 9982888
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||||||||||||| ||||||||||||||| | ||||||||||| ||||||||| || ||||| |||||||||||||||||||||    
T  9982804 catggcaacaaaactcatacccgtggttactctcccgaaccaaatccaatttgatggattttctccgttttgactgggtttgggt 9982888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 16433093 - 16433208
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggtttttccccgatttaa 280  Q
    |||||||| |||||| ||| ||||||||||||  ||||||||||| ||||||||||| |||| ||| |||||| |||||||| | ||||| ||||||| |    
T  16433093 catggcaataaaacctatatccgtggttacccatccgaaccaaactcaatttgacggattttccccattttgattgggtttgag-ttttctccgatttca 16433191  T
Q  281 aaacacgggtatgggac 297  Q
    |||||||||||||||||    
T  16433192 aaacacgggtatgggac 16433208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 49250687 - 49250771
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||| ||||||||  |||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  49250687 catgacaacaaaattcatacccgtggttatccgcccgaaccaaattcaatttgacgggttttctccgttttgactgggtttgggt 49250771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 51422033 - 51421949
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||| |||| ||||| |||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||||||    
T  51422033 catggcaataaaatccatatccgtggttacccgcccgaaccaaacccaatttgatgggttttccccattttgactgggtttgggt 51421949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 50426569 - 50426655
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttc-ccgttttgactgggtttgggttt 267  Q
    ||||||||||||| ||||||||| ||||||| || ||||||||| ||||||| || ||||||| |||||||||||||||||||||||    
T  50426569 catggcaacaaaatccatacccgcggttaccggctcgaaccaaacccaatttaacaggttttctccgttttgactgggtttgggttt 50426655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 18353994 - 18354075
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttg 262  Q
    |||||||||||||||| |||||| | ||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||    
T  18353994 catggcaacaaaacccgtacccgcgattacccgcccgaaccaaattcaatttgacgggtttttcccgttttgactggatttg 18354075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 28298121 - 28298037
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttccc-gttttgactgggtttgggt 265  Q
    |||| ||||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||| |||||||    
T  28298121 catgtcaacaaaactcatatccgtggttacccacccgaaccaaatccaatttgacgggttttccctgttttgattggatttgggt 28298037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 34611248 - 34611184
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggttttccc 246  Q
    |||| |||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  34611248 catgacaacaaaatccatacccgtggttacccgcctgaaccaaatccaatttgacgggttttccc 34611184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 49740940 - 49741055
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggtttttccccgatttaa 280  Q
    ||||||||||||| ||||||||||||||| || |  ||||||||| ||||||||||| |||| ||| |||||||||||||| || |||||||| |||| |    
T  49740940 catggcaacaaaatccatacccgtggttatccacttgaaccaaactcaatttgacggattttcccctttttgactgggtttagg-ttttccccaatttca 49741038  T
Q  281 aaacacgggtatgggac 297  Q
    ||||| || ||||||||    
T  49741039 aaacatggatatgggac 49741055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 24711022 - 24710940
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgg 263  Q
    |||| |||||||||||| ||||||| ||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  24711022 catgacaacaaaacccacacccgtgattatccacccgaaccaaattcaatttgacgggttttccccgttttgactgggtttgg 24710940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 39616468 - 39616383
Alignment:
Q  183 catggcaacaaaacccataccc-gtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| ||||||||| ||||||| | ||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||||||    
T  39616468 catgacaacaaaactcataccccgcggttacccgcccgaaccaaactcaatttgacgagttttccccgttttgactgagtttgggt 39616383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 34059062 - 34059146
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtt-ttcccgttttgactgggtttgggt 265  Q
    ||||||||||||||||||||||  ||||| ||| ||||||||||  |||||||||||||| |||||||||||||| | |||||||    
T  34059062 catggcaacaaaacccatacccacggttatccgtccgaaccaaattcaatttgacgggttattcccgttttgactagatttgggt 34059146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 265
Target Start/End: Original strand, 34673189 - 34673280
Alignment:
Q  176 atctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||| |||| ||||||||| |||||| ||| |||||||||||||||||| ||||||| |||| |||| ||| |||| |||||||||||||    
T  34673189 atctaggcatgacaacaaaactcataccagtgattacccgcccgaaccaaacccaatttaacggattttccccattttaactgggtttgggt 34673280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 40087373 - 40087462
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||| |||||||| ||||| ||| | ||||||||  ||||||||||| |||| ||||||||||||| ||||||||    
T  40087373 ctaggcatggcaacaaaactcatacccgcggttatccgtctgaaccaaattcaatttgacggattttccccgttttgactgagtttgggt 40087462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 16409116 - 16409033
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacc-aatttgacgggttttccc-gttttgactgggtttgggt 265  Q
    |||| ||||||||||||||| |  |||||||| | |||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  16409116 catgacaacaaaacccatacacacggttaccc-ctcgaatcaaacccaatttgacgggttttccccgttttgactgggtttgggt 16409033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 38106387 - 38106316
Alignment:
Q  176 atctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttccc 246  Q
    |||||| |||||||||||||| ||||| | |||||||||  ||||||||||| |||||||| || |||||||    
T  38106387 atctaggcatggcaacaaaactcatactcatggttacccatccgaaccaaacacaatttgatggattttccc 38106316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 13020768 - 13020686
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttc-ccgttttgactgggtttgg 263  Q
    |||| |||||||||| ||| | | ||||||| | ||||||||||| |||| |||||||||||| |||| ||||||||||||||    
T  13020768 catgacaacaaaacctatatctgcggttacctgtccgaaccaaactcaatctgacgggttttctccgtcttgactgggtttgg 13020686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 42439584 - 42439638
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgac 236  Q
    ||||||||||||| |||||  |||||||| ||||||||||||||| |||||||||    
T  42439584 catggcaacaaaatccatattcgtggttatccgcccgaaccaaactcaatttgac 42439638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 19003580 - 19003664
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaa-accaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||||||||||||||| | ||| ||| ||||||||| || |||  || |||||||||||||| |||| ||||||| |||||||||    
T  19003580 catggcaacaaaacccgtgcccatgggtacccgcccaaagcaaccccgatttgacgggttttccccgatttgactaggtttgggt 19003664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 29871200 - 29871283
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggttttcc-cgttttgactgggtttgggt 265  Q
    |||| ||||||||| ||||| |||||||| ||  |||| |||||| |||||||||||||||||| ||||||||||  ||||||||    
T  29871200 catgacaacaaaactcatactcgtggttatccatccga-ccaaactcaatttgacgggttttcctcgttttgactaagtttgggt 29871283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 90756 - 90648
Alignment:
Q  192 aaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggt-----ttttccccgatttaaaaac 284  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||||||| |||| ||||||||||||||||||||||     ||||||||||||| |||||    
T  90756 aaaactcatacccgtggttacccgcccgaactaaactcaatttgacggattttccccgttttgactgggtttgggtatgggttttccccgatttcaaaac 90657  T
Q  285 acgggtatg 293  Q
    |||||||||    
T  90656 acgggtatg 90648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 397 - 314
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaaccaatttgacgggttttc-ccgttttgactgggtttgggt 265  Q
    |||| |||||||||||||| ||||| ||||||||| |||||||||  | ||||||||||||| |||||||||||| ||||||||    
T  397 catgacaacaaaacccatatccgtgattacccgccagaaccaaactcaattgacgggttttctccgttttgactgagtttgggt 314  T

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Target: scaffold0036 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 33573 - 33487
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaac-caatttgacgggtttt-cccgttttgactgggtttgggttt 267  Q
    ||||||||||||||| ||| |||||||||||| || |||| |||| |||||||||||||||| ||||||||||  ||||||||||||    
T  33573 catggcaacaaaacctatatccgtggttacccacctgaactaaactcaatttgacgggttttacccgttttgatcgggtttgggttt 33487  T

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Target: scaffold0036; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 33481 - 33440
Alignment:
Q  255 tgggtttgggtttttccccgatttaaaaacacgggtatgggac 297  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  33481 tgggtttgggtttt-ccccgatttcaaaacacgggtatgggac 33440  T

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Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 14093 - 14182
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    |||| |||| ||||||||| ||||| ||||||||||| ||| ||||||| ||||||||||||| |||||||||||||  |||||||||||    
T  14093 ctagacatgacaacaaaactcatactcgtggttacccacccaaaccaaacccaatttgacgggtttttcccgttttgtttgggtttgggt 14182  T

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Target: scaffold0519 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 10469 - 10380
Alignment:
Q  178 ctagccatggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacggg-ttttcccgttttgactgggtttgggt 265  Q
    |||| |||| |||||||||||||||  | ||||||| | |||||||||| ||||||||||||| |||| ||||||||||| |||||||||    
T  10469 ctaggcatgacaacaaaacccatacatgcggttacctgtccgaaccaaatccaatttgacgggttttttccgttttgactaggtttgggt 10380  T

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Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 7870 - 7786
Alignment:
Q  183 catggcaacaaaacccatacccgtggttacccgcccgaaccaaa-ccaatttgacgggtttt-cccgttttgactgggtttgggt 265  Q
    |||| |||||||| |||||||||||||||||| ||||||| |||   ||||||||||||||| |||||||||| || ||||||||    
T  7870 catgccaacaaaatccatacccgtggttacccacccgaactaaatttaatttgacgggttttccccgttttgattgagtttgggt 7786  T

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