View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9735_2 (Length: 910)

Name: NF9735_2
Description: NF9735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9735_2
NF9735_2
[»] chr1 (30 HSPs)
chr1 (28-720)||(4229646-4230340)
chr1 (280-720)||(4361436-4361872)
chr1 (264-554)||(27901909-27902200)
chr1 (280-700)||(2603305-2603720)
chr1 (286-642)||(21168216-21168566)
chr1 (276-649)||(21381909-21382278)
chr1 (319-676)||(50826323-50826674)
chr1 (288-554)||(23511525-23511791)
chr1 (368-554)||(21137648-21137836)
chr1 (794-888)||(4229452-4229546)
chr1 (371-554)||(21076556-21076741)
chr1 (404-554)||(27131736-27131887)
chr1 (371-554)||(22684592-22684778)
chr1 (374-514)||(21550522-21550662)
chr1 (371-554)||(21310725-21310911)
chr1 (375-554)||(16406729-16406910)
chr1 (367-493)||(31845674-31845802)
chr1 (368-493)||(29305211-29305338)
chr1 (367-493)||(1528665-1528793)
chr1 (367-493)||(22809079-22809207)
chr1 (374-507)||(22086398-22086533)
chr1 (369-493)||(27561892-27562018)
chr1 (79-150)||(27901732-27901803)
chr1 (288-378)||(27130166-27130256)
chr1 (368-496)||(41368674-41368803)
chr1 (76-131)||(50826085-50826141)
chr1 (76-150)||(4361994-4362068)
chr1 (368-496)||(41383581-41383710)
chr1 (405-450)||(18530577-18530622)
chr1 (460-493)||(22794479-22794512)
[»] chr8 (22 HSPs)
chr8 (99-720)||(15337037-15337655)
chr8 (99-720)||(15426102-15426720)
chr8 (99-720)||(15517406-15518024)
chr8 (264-642)||(22697966-22698346)
chr8 (286-642)||(18735283-18735633)
chr8 (368-631)||(41438729-41438988)
chr8 (368-554)||(29708122-29708310)
chr8 (374-554)||(15911712-15911894)
chr8 (360-554)||(27818173-27818371)
chr8 (368-507)||(17426099-17426240)
chr8 (368-507)||(20193157-20193298)
chr8 (368-492)||(22352031-22352157)
chr8 (368-502)||(16667962-16668098)
chr8 (371-554)||(22064583-22064769)
chr8 (94-175)||(32116439-32116519)
chr8 (367-493)||(25388999-25389127)
chr8 (418-514)||(18846794-18846889)
chr8 (76-130)||(22698471-22698525)
chr8 (396-514)||(22698726-22698843)
chr8 (429-514)||(17637865-17637949)
chr8 (367-493)||(12821239-12821367)
chr8 (76-119)||(18735078-18735121)
[»] chr2 (38 HSPs)
chr2 (77-693)||(37130105-37130721)
chr2 (77-709)||(28567522-28568148)
chr2 (290-703)||(23814802-23815215)
chr2 (76-695)||(21256303-21256901)
chr2 (272-709)||(34827439-34827864)
chr2 (77-496)||(23870534-23870950)
chr2 (264-703)||(23803181-23803613)
chr2 (77-496)||(22707874-22708291)
chr2 (442-703)||(23829650-23829908)
chr2 (350-611)||(22593716-22593972)
chr2 (288-634)||(16664561-16664904)
chr2 (288-634)||(22880857-22881199)
chr2 (368-634)||(31817908-31818170)
chr2 (360-554)||(10480355-10480552)
chr2 (404-514)||(21904968-21905078)
chr2 (416-533)||(25349252-25349369)
chr2 (405-511)||(20524168-20524274)
chr2 (373-507)||(23190254-23190390)
chr2 (373-507)||(23611509-23611645)
chr2 (383-514)||(23769379-23769511)
chr2 (371-554)||(39227405-39227591)
chr2 (373-507)||(22648571-22648707)
chr2 (373-507)||(23203870-23204006)
chr2 (373-496)||(23615125-23615250)
chr2 (374-509)||(30051903-30052039)
chr2 (374-509)||(30142947-30143083)
chr2 (396-509)||(30089918-30090031)
chr2 (396-509)||(30126523-30126636)
chr2 (77-149)||(23803720-23803792)
chr2 (367-493)||(24896625-24896753)
chr2 (373-488)||(22633822-22633939)
chr2 (405-506)||(23995665-23995765)
chr2 (76-178)||(23815319-23815420)
chr2 (405-514)||(20442245-20442353)
chr2 (77-150)||(34827975-34828048)
chr2 (368-439)||(24967522-24967594)
chr2 (374-508)||(20281151-20281285)
chr2 (419-521)||(25966176-25966277)
[»] scaffold0190 (1 HSPs)
scaffold0190 (76-720)||(7120-7762)
[»] chr3 (23 HSPs)
chr3 (74-720)||(43135373-43136016)
chr3 (77-709)||(132269-132875)
chr3 (368-554)||(12844523-12844711)
chr3 (371-514)||(13023870-13024014)
chr3 (371-634)||(12021353-12021613)
chr3 (368-507)||(7341461-7341602)
chr3 (368-507)||(7396207-7396348)
chr3 (368-507)||(14683148-14683289)
chr3 (368-493)||(10139754-10139881)
chr3 (371-554)||(12491913-12492099)
chr3 (368-493)||(10171121-10171248)
chr3 (368-507)||(11887252-11887393)
chr3 (368-507)||(13299464-13299605)
chr3 (368-507)||(13310122-13310263)
chr3 (368-502)||(10778975-10779111)
chr3 (368-507)||(10792493-10792634)
chr3 (328-554)||(22444887-22445103)
chr3 (396-514)||(13101848-13101965)
chr3 (374-511)||(14133303-14133439)
chr3 (374-450)||(55002422-55002498)
chr3 (396-514)||(14345569-14345686)
chr3 (454-511)||(1934645-1934702)
chr3 (77-131)||(22444638-22444692)
[»] chr4 (18 HSPs)
chr4 (295-720)||(1658509-1658932)
chr4 (264-703)||(18566816-18567250)
chr4 (275-643)||(10267123-10267491)
chr4 (276-700)||(31079581-31079998)
chr4 (292-634)||(3077825-3078158)
chr4 (360-554)||(49526418-49526616)
chr4 (794-888)||(53304997-53305091)
chr4 (371-634)||(14022308-14022567)
chr4 (368-507)||(18108683-18108824)
chr4 (396-511)||(50687558-50687673)
chr4 (368-507)||(15153618-15153759)
chr4 (368-493)||(14556944-14557071)
chr4 (369-493)||(13277235-13277361)
chr4 (369-493)||(13292613-13292739)
chr4 (377-493)||(14714160-14714278)
chr4 (377-493)||(14775840-14775958)
chr4 (77-150)||(18567357-18567430)
chr4 (460-511)||(27812313-27812364)
[»] scaffold0480 (1 HSPs)
scaffold0480 (75-720)||(3411-4029)
[»] scaffold0077 (1 HSPs)
scaffold0077 (77-642)||(12025-12583)
[»] scaffold0151 (2 HSPs)
scaffold0151 (264-703)||(13950-14389)
scaffold0151 (77-150)||(14496-14569)
[»] chr6 (17 HSPs)
chr6 (75-720)||(11793802-11794446)
chr6 (128-709)||(18257908-18258488)
chr6 (271-720)||(16597047-16597486)
chr6 (288-585)||(26460517-26460809)
chr6 (319-554)||(19272267-19272503)
chr6 (369-501)||(23496542-23496676)
chr6 (369-501)||(23490944-23491078)
chr6 (368-507)||(19405785-19405926)
chr6 (369-507)||(23431904-23432044)
chr6 (369-493)||(19025403-19025529)
chr6 (367-493)||(16209785-16209913)
chr6 (367-493)||(30755542-30755670)
chr6 (369-493)||(19038446-19038572)
chr6 (367-496)||(1557693-1557824)
chr6 (416-507)||(16310102-16310194)
chr6 (78-119)||(16597641-16597682)
chr6 (620-720)||(19272115-19272207)
[»] chr5 (19 HSPs)
chr5 (264-703)||(10624191-10624636)
chr5 (80-558)||(40932585-40933064)
chr5 (264-720)||(18156033-18156479)
chr5 (287-642)||(20024324-20024673)
chr5 (288-582)||(16832018-16832311)
chr5 (555-673)||(40936793-40936909)
chr5 (367-493)||(21530296-21530424)
chr5 (367-493)||(26274110-26274238)
chr5 (367-494)||(21504629-21504758)
chr5 (367-507)||(20506318-20506460)
chr5 (368-493)||(21982626-21982753)
chr5 (76-150)||(10624010-10624084)
chr5 (396-514)||(19859574-19859691)
chr5 (416-511)||(20249243-20249337)
chr5 (76-150)||(18155852-18155926)
chr5 (404-514)||(19212406-19212515)
chr5 (849-888)||(4154468-4154507)
chr5 (561-645)||(18024462-18024547)
chr5 (460-493)||(21507881-21507914)
[»] scaffold0168 (1 HSPs)
scaffold0168 (76-720)||(1208-1836)
[»] chr7 (28 HSPs)
chr7 (77-709)||(40342663-40343274)
chr7 (264-582)||(10827729-10828043)
chr7 (264-582)||(11021521-11021835)
chr7 (292-676)||(18752572-18752945)
chr7 (272-478)||(24876397-24876605)
chr7 (77-382)||(13346726-13347029)
chr7 (264-392)||(10864057-10864184)
chr7 (374-514)||(41239219-41239358)
chr7 (371-554)||(11989350-11989536)
chr7 (368-507)||(44277669-44277810)
chr7 (368-496)||(14035881-14036011)
chr7 (368-496)||(14345911-14346041)
chr7 (448-582)||(10864186-10864314)
chr7 (368-507)||(14323707-14323848)
chr7 (373-507)||(18174864-18175000)
chr7 (368-507)||(18115226-18115366)
chr7 (368-507)||(18141794-18141934)
chr7 (76-150)||(24876718-24876792)
chr7 (367-496)||(1978232-1978363)
chr7 (367-496)||(15758551-15758682)
chr7 (405-507)||(18160094-18160197)
chr7 (381-511)||(16713271-16713400)
chr7 (381-511)||(17687507-17687636)
chr7 (396-511)||(10478189-10478303)
chr7 (77-150)||(10828149-10828222)
chr7 (77-150)||(11021941-11022014)
chr7 (77-150)||(10863879-10863952)
chr7 (404-514)||(18450811-18450920)
[»] scaffold0096 (2 HSPs)
scaffold0096 (264-703)||(36211-36653)
scaffold0096 (85-150)||(36039-36104)
[»] scaffold0063 (2 HSPs)
scaffold0063 (274-642)||(70533-70898)
scaffold0063 (79-132)||(70346-70398)
[»] scaffold0012 (1 HSPs)
scaffold0012 (255-640)||(249957-250337)
[»] scaffold0100 (1 HSPs)
scaffold0100 (296-646)||(8903-9247)
[»] scaffold0770 (2 HSPs)
scaffold0770 (286-514)||(3696-3923)
scaffold0770 (560-642)||(3597-3680)
[»] scaffold0029 (2 HSPs)
scaffold0029 (286-514)||(102000-102227)
scaffold0029 (560-642)||(101901-101984)
[»] scaffold0016 (1 HSPs)
scaffold0016 (293-634)||(200040-200372)
[»] scaffold0014 (2 HSPs)
scaffold0014 (292-642)||(7343-7685)
scaffold0014 (77-131)||(7133-7186)
[»] scaffold0059 (2 HSPs)
scaffold0059 (298-552)||(68064-68321)
scaffold0059 (298-552)||(76169-76426)
[»] scaffold0003 (1 HSPs)
scaffold0003 (371-554)||(33292-33477)
[»] scaffold0013 (4 HSPs)
scaffold0013 (298-552)||(107335-107593)
scaffold0013 (369-554)||(129152-129339)
scaffold0013 (474-554)||(129871-129952)
scaffold0013 (474-554)||(144702-144783)
[»] scaffold0053 (1 HSPs)
scaffold0053 (368-554)||(45187-45376)
[»] scaffold0297 (1 HSPs)
scaffold0297 (360-554)||(8735-8931)
[»] scaffold0854 (2 HSPs)
scaffold0854 (794-888)||(1289-1383)
scaffold0854 (28-65)||(1415-1452)
[»] scaffold0417 (1 HSPs)
scaffold0417 (330-514)||(1251-1436)
[»] scaffold0239 (3 HSPs)
scaffold0239 (368-554)||(16947-17136)
scaffold0239 (375-507)||(5542-5674)
scaffold0239 (425-507)||(3-84)
[»] scaffold0216 (1 HSPs)
scaffold0216 (371-553)||(19925-20110)
[»] scaffold0362 (1 HSPs)
scaffold0362 (371-554)||(11291-11477)
[»] scaffold0101 (2 HSPs)
scaffold0101 (368-507)||(50907-51048)
scaffold0101 (368-507)||(46269-46410)
[»] scaffold0358 (1 HSPs)
scaffold0358 (367-493)||(15703-15831)
[»] scaffold0023 (6 HSPs)
scaffold0023 (427-554)||(116456-116584)
scaffold0023 (368-493)||(6672-6799)
scaffold0023 (367-493)||(84994-85122)
scaffold0023 (367-493)||(62133-62261)
scaffold0023 (367-493)||(71311-71439)
scaffold0023 (368-493)||(22608-22735)
[»] scaffold0270 (2 HSPs)
scaffold0270 (368-493)||(8094-8221)
scaffold0270 (368-493)||(15224-15351)
[»] scaffold0019 (1 HSPs)
scaffold0019 (368-493)||(151416-151543)
[»] scaffold0108 (2 HSPs)
scaffold0108 (369-493)||(23017-23143)
scaffold0108 (373-493)||(44197-44319)
[»] scaffold0740 (1 HSPs)
scaffold0740 (368-507)||(5621-5762)
[»] scaffold0282 (1 HSPs)
scaffold0282 (367-493)||(8774-8902)
[»] scaffold0130 (3 HSPs)
scaffold0130 (373-507)||(39853-39989)
scaffold0130 (367-493)||(29356-29484)
scaffold0130 (368-507)||(28530-28671)
[»] scaffold0046 (1 HSPs)
scaffold0046 (368-493)||(30579-30706)
[»] scaffold0081 (1 HSPs)
scaffold0081 (369-493)||(44276-44402)
[»] scaffold0026 (2 HSPs)
scaffold0026 (367-507)||(118368-118510)
scaffold0026 (367-507)||(142218-142360)
[»] scaffold0323 (1 HSPs)
scaffold0323 (368-507)||(4505-4646)
[»] scaffold0241 (1 HSPs)
scaffold0241 (367-490)||(25069-25194)
[»] scaffold0040 (1 HSPs)
scaffold0040 (368-507)||(41324-41465)
[»] scaffold0022 (1 HSPs)
scaffold0022 (369-496)||(58491-58620)
[»] scaffold0001 (5 HSPs)
scaffold0001 (367-493)||(25104-25232)
scaffold0001 (367-493)||(28602-28730)
scaffold0001 (367-493)||(390070-390198)
scaffold0001 (367-493)||(115361-115489)
scaffold0001 (367-493)||(129913-130040)
[»] scaffold0080 (1 HSPs)
scaffold0080 (369-493)||(2422-2548)
[»] scaffold0795 (1 HSPs)
scaffold0795 (76-149)||(1975-2048)
[»] scaffold0423 (1 HSPs)
scaffold0423 (368-479)||(1721-1834)
[»] scaffold1496 (1 HSPs)
scaffold1496 (374-513)||(1396-1535)
[»] scaffold0021 (2 HSPs)
scaffold0021 (367-493)||(18514-18642)
scaffold0021 (367-493)||(28045-28173)
[»] scaffold0509 (2 HSPs)
scaffold0509 (368-493)||(1235-1362)
scaffold0509 (368-493)||(7663-7790)
[»] scaffold0304 (1 HSPs)
scaffold0304 (368-493)||(5795-5922)
[»] scaffold0060 (1 HSPs)
scaffold0060 (368-493)||(32065-32192)
[»] scaffold0253 (1 HSPs)
scaffold0253 (368-507)||(15324-15465)
[»] scaffold0035 (1 HSPs)
scaffold0035 (374-496)||(25766-25888)
[»] scaffold0064 (1 HSPs)
scaffold0064 (373-493)||(43134-43256)
[»] scaffold0005 (1 HSPs)
scaffold0005 (377-493)||(63772-63890)
[»] scaffold0193 (1 HSPs)
scaffold0193 (367-493)||(26792-26920)
[»] scaffold0171 (1 HSPs)
scaffold0171 (418-514)||(26923-27018)
[»] scaffold0516 (1 HSPs)
scaffold0516 (460-507)||(11274-11321)
[»] scaffold0058 (1 HSPs)
scaffold0058 (404-514)||(15023-15132)
[»] scaffold0126 (1 HSPs)
scaffold0126 (371-511)||(31222-31362)
[»] scaffold0504 (1 HSPs)
scaffold0504 (374-449)||(683-759)
[»] scaffold0093 (1 HSPs)
scaffold0093 (454-511)||(43669-43726)


Alignment Details
Target: chr1 (Bit Score: 579; Significance: 0; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 579; E-Value: 0
Query Start/End: Original strand, 28 - 720
Target Start/End: Complemental strand, 4230340 - 4229646
Alignment:
Q  28 gacatcatgtgaaggtcgacgacgatggtggtgacgacgactggaggtgtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttg 127  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4230340 gacatcatgtgaaggtcaacagcgatggtggtgacgacgactggaggtgtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttg 4230241  T
Q  128 accttatcatcgaagaaattgttttctcctttcctatcgaagttggacttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagtta 227  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||    
T  4230240 accttatcatcgaagaaattgttttctcatttcctatcgaagttggacttgctgaaaaatactcaaaagcgtgtgtgttagttcgacaggcggaaattta 4230141  T
Q  228 tcgaaggacaattcttgtgctgattcagataaggacaaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagttta 327  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4230140 tcgaaggacaattcttgtggtgattcagataaggtcaaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagtttcgttagttta 4230041  T
Q  328 ctgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaa 426  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||     
T  4230040 ctgcagttatagttttagattcaaatctaggcagttatttctatttgtataaatagtagttttccctaggagaaaagggtcacaattctatcatacaaat 4229941  T
Q  427 aacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaat 526  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  4229940 aacttacgctcaaactatccgcatggaagagataaacgagtcacaagttgcaatgtatgaatatgtgtaccaacttacattcaatcaacacaattcaagt 4229841  T
Q  527 tcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggtt 625  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||| ||||||    
T  4229840 tcatttctttaagtgtctttacaatttacaattcacttgtttcttttgagcaatttatttacagctatttacaccaatttcgattgggttcaagtgggtt 4229741  T
Q  626 gaattcgatagctttttcttactttattttatttatcaaattcttcaagaataacattaaatttctggaagataacaagcacaaatatgtcctta 720  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4229740 gaattcgattgctttttcttactttattttatttatcaaattcttcaagaataacattaaatttctggaagataacaagcacagatatgtcctta 4229646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 280 - 720
Target Start/End: Complemental strand, 4361872 - 4361436
Alignment:
Q  280 caagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataa 379  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  4361872 caagatacattcgaaattcaaatcgaatggataagtattgttagtttactgcagttatagttttaaattgaaatctatgtagttatttctatttgtataa 4361773  T
Q  380 atagtag-ttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgc 477  Q
    ||||||| ||||||||||  ||||| |||||||| || |||||||||||||||||  |||||| |||||||||| ||||||||||||||| |||||||||    
T  4361772 atagtagtttttccctagcgaaaaaaggtcacaattcaatcatacaaaaaacttatactcaaattatccgcatggaagagagaaacgagtaacaagttgc 4361673  T
Q  478 aatgtatgaatatgtgtacaaacttacattcaatcaacacaat----tcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttctttt 572  Q
    ||| |||||| |||||||| || ||||||||||||||  ||||    | || |||||||| |||||||||||||||||||       |||||||||||||    
T  4361672 aatatatgaacatgtgtaccaatttacattcaatcaatgcaatttaattaagttcattttcttaaatgtctttacaattt-------acttgtttctttt 4361580  T
Q  573 gagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttca 672  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||| |||||   ||||||| ||||||||||||| |||||||    
T  4361579 gagcaattcatttacctttatttacaccaatttcgattgagttcaactgggttgaattcgattgcttt---ttactttcttttatttatcaagttcttca 4361483  T
Q  673 agaataacattaaatttctggaagataacaagcacaaatatgtcctta 720  Q
    | ||||||||||||||||||  | ||||||| ||| ||||||||||||    
T  4361482 acaataacattaaatttctgagaaataacaaacac-aatatgtcctta 4361436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 264 - 554
Target Start/End: Original strand, 27901909 - 27902200
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || | ||||||||| ||||||||||| ||||||    
T  27901909 aaacaacggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtt-actacaatcatagttttaaattcaaatctaggcagtt 27902007  T
Q  364 atttctatttgtataaatagtagtttt-ccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaa 462  Q
    ||||||||||||||||||||||||||| ||| ||  |||| ||||||||  | |||||||| ||||||||| |||||| ||||| |||| ||||||||||    
T  27902008 atttctatttgtataaatagtagtttttcccaagggaaaaaggtcacaatccaatcatacacaaaacttacactcaaattatccacatggaagagagaaa 27902107  T
Q  463 cgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattttt-taaatgtctttacaatttac 554  Q
     |||||||||||||||||||||||| |||||||| || ||||||||||||||  ||||| || ||||||||| ||||||||||| ||||||||    
T  27902108 ggagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagttcatttttctaaatgtctttgcaatttac 27902200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 280 - 700
Target Start/End: Complemental strand, 2603720 - 2603305
Alignment:
Q  280 caagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataa 379  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  2603720 caagatacattcgaaattcaaatagaatggataagtattgttagtttactgcagttatagttttaaattcaaatctaggtagttatttctatttgtataa 2603621  T
Q  380 atagtag-------ttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgag-tcac 470  Q
    |||||||       |||||  || | ||||||||| |||| || ||||||| |||||||||  |||||| |||||||||| |||||||||||||| ||||    
T  2603620 atagtagtagtagtttttctgtagggaaaaagggttacaattcaatcatac-aaaaacttaaactcaaattatccgcatggaagagagaaacgagatcac 2603522  T
Q  471 aagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttct 569  Q
    ||||||||||||||||| |||| ||| || ||||||||||||||  ||||| || |||||||| |||||||||||||||||||       ||||||||||    
T  2603521 aagttgcaatgtatgaacatgtataccaatttacattcaatcaatgcaatttaagttcattttcttaaatgtctttacaattt-------acttgtttct 2603429  T
Q  570 tttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattct 669  Q
    |||||| |||||||||||  ||||||||||  |||| |||||||||||||| |||||||||| ||  ||||   ||||||| |    |||||||| ||||    
T  2603428 tttgagtaattcatttacctttatttacactgatttagattgggttcaacttggttgaattctattacttt---ttactttct----tttatcaagttct 2603336  T
Q  670 tcaagaataacattaaatttctggaagataa 700  Q
    ||||||| || ||||||||||||||| ||||    
T  2603335 tcaagaacaatattaaatttctggaaaataa 2603305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 286 - 642
Target Start/End: Complemental strand, 21168566 - 21168216
Alignment:
Q  286 acattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagta 385  Q
    |||||||||||||||||| ||||| |||| || |||||||| ||||| ||||| ||||| |  |||||||| ||||||||||||||||||||||||||||    
T  21168566 acattcgaaattcaaatcaaatggctaagattagttagttttctgcaattataattttaaac-caaatctaggcagttatttctatttgtataaatagta 21168468  T
Q  386 gttttccct-agaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtat 484  Q
    ||||| | | |  |||||||||||||| || ||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  21168467 gtttttcttaacgaaaaagggtcacaattcaatcatac-aaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtat 21168369  T
Q  485 gaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcat 583  Q
    |||||||||||  ||  |||||||||||||  ||||| || |||||||| ||| |||||||| ||||||       ||||||||||||||||||||||||    
T  21168368 gaatatgtgtagcaatctacattcaatcaatgcaatttaagttcattttcttacatgtctttgcaattt-------acttgtttcttttgagcaattcat 21168276  T
Q  584 ttacggttatttacaccaat-ttcgattgggttcaactgggttgaattcgatagcttttt 642  Q
    | ||  ||||||| |||  | ||||||||| ||||||||||||||||||||| |||||||    
T  21168275 tcacttttatttataccggtcttcgattggattcaactgggttgaattcgattgcttttt 21168216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 276 - 649
Target Start/End: Complemental strand, 21382278 - 21381909
Alignment:
Q  276 ttttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgt 375  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||| |||| || ||| |||| |||||||||    
T  21382278 ttttaaagacacattcgaaattcaaatcgaatggataagttctgttagtt-actgcagttatagtttttaatttaaatttaggcaattatctctatttgt 21382180  T
Q  376 ataaatagtagttt--tccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaag 473  Q
    ||||||||| ||||  |||  || |||| ||||||| | || |||||||||||| ||||| |||||| ||| |||||| |||||||||||||||||||||    
T  21382179 ataaatagtggtttcctccaaaggaaaaggggtcacgattcaatcatacaaaaagcttacactcaaattattcgcatggaagagagaaacgagtcacaag 21382080  T
Q  474 ttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttctttt 572  Q
    || ||||||||||| |||||||| ||  || |||| |||||  ||||| || |||||||| |||||||||||||||  ||        ||||||||||||    
T  21382079 ttacaatgtatgaacatgtgtaccaatctatattcgatcaatgcaatttaagttcattttcttaaatgtctttacacctt-------tcttgtttctttt 21381987  T
Q  573 gagcaattcatttacggttatttacaccaat-ttcgattgggttcaactgggttgaattcgatagctttttcttactt 649  Q
    |||||||||||||||  ||||||| |||| | ||||||||| |||||||||||| |||||||| ||||||||||||||    
T  21381986 gagcaattcatttacttttatttataccagtcttcgattggattcaactgggttaaattcgattgctttttcttactt 21381909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 319 - 676
Target Start/End: Original strand, 50826323 - 50826674
Alignment:
Q  319 gttagtttactgcagttatagttttagattcaaatctatgcagttatt-tctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatcta 416  Q
    |||||||| ||||||||||||||||| ||| ||| ||| ||||||||| |||||||||||||||| || |||| | ||| |||||||||| |||| || |    
T  50826323 gttagttttctgcagttatagttttaaatttaaa-ctaggcagttattctctatttgtataaataataatttttcttaggaaaaaagggttacaattcaa 50826421  T
Q  417 tcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaaca 516  Q
    ||||||||||| ||||| |||||| ||||||  || ||| ||||||||||||||| |||||||| ||||||| |||| || |||||||||||||||||      
T  50826422 tcatacaaaaa-cttacactcaaattatccgtttggaagcgagaaacgagtcacaggttgcaatctatgaatctgtgcactaacttacattcaatcaatg 50826520  T
Q  517 caattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacggttatttacacca-atttcgattgggt 614  Q
    ||||| || ||||||| ||||||||||||| ||||||       ||||||||||||| || |||||||||||   ||||| || || |  |||||||| |    
T  50826521 caatttaagttcatttctttaaatgtctttgcaattt-------acttgtttcttttaagtaattcatttacttctatttgcatcatacctcgattggat 50826613  T
Q  615 tcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttcaagaa 676  Q
    |||||||||||||||||||| || |||| ||  ||| || | | ||||||||||||||||||    
T  50826614 tcaactgggttgaattcgattgccttttatttattt-ttatttgtatcaaattcttcaagaa 50826674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 288 - 554
Target Start/End: Original strand, 23511525 - 23511791
Alignment:
Q  288 attcgaaattcaaatcgaatggataagttttgttagttta-ctgcagttatagttttagattcaaatctatgcagttatt-tctatttg-tataaatagt 384  Q
    |||||| |||||||||| |||| |||| || | ||||||  ||||||||||||||||      ||| ||| | ||||||| |||||||| ||||||||||    
T  23511525 attcgatattcaaatcggatggctaagattaggtagtttttctgcagttatagttttt-----aaaactaggtagttattctctatttggtataaatagt 23511619  T
Q  385 agttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgta 483  Q
    |||||| | ||| ||||| ||||||||| || ||||||| |||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||||    
T  23511620 agtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacgctcaaactatccgtatggaagcgataaacgagtcacaagttgcaatgta 23511719  T
Q  484 tgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||||||||| |||||||||||| ||||  ||||| |||| ||||| |||||||| |||| ||||||||    
T  23511720 tgaatatgtgtaccaacttacattcagtcaatgcaatttaaatacatttctttaaatgcctttgcaatttac 23511791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 368 - 554
Target Start/End: Original strand, 21137648 - 21137836
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaagggt-cacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgag 466  Q
    ||||||||||||||||||||||| | ||| |||||  || ||||| || ||||||| |||||||||||||||||||||||| ||| ||| || |||||||    
T  21137648 ctatttgtataaatagtagtttttcttaggaaaaactgttcacaattcaatcatactaaaaacttacgctcaaactatccgtatggaagcgataaacgag 21137747  T
Q  467 tcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||  |||||  ||| ||||| |||||||| |||| ||||||||    
T  21137748 tcacaagttgcaatgtatgaatatgtgtaccaacttacattcagtcaatgcaatttcaatacatttctttaaatgcctttgcaatttac 21137836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 794 - 888
Target Start/End: Complemental strand, 4229546 - 4229452
Alignment:
Q  794 ggaagaggtgtggtgctgacattgggaggatggtggtggtggggaggacgacggcgggagatctggaggacagtgagacttcagagagatggaga 888  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  4229546 ggaagaggtgtggtgctgacaatgggaggatggtggtggtggggaggacgacggcgagagatctggaggacagtgagagttcagagagatggaga 4229452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 371 - 554
Target Start/End: Original strand, 21076556 - 21076741
Alignment:
Q  371 tttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtca 469  Q
    |||||||||||||||||||| | ||| |||||| |||||||| || ||||||| |||||||||| |||||| |||||| ||| ||| ||   ||||||||    
T  21076556 tttgtataaatagtagtttttcttaggaaaaaatggtcacaattcaatcatactaaaaacttacactcaaattatccgtatggaagcgactgacgagtca 21076655  T
Q  470 caagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
     |||||||||||||||||||||||||| |||||||||||||||||  |||||  ||| ||||| ||||||||||||| ||||||||    
T  21076656 taagttgcaatgtatgaatatgtgtaccaacttacattcaatcaatgcaatttcaatacatttctttaaatgtctttgcaatttac 21076741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 404 - 554
Target Start/End: Original strand, 27131736 - 27131887
Alignment:
Q  404 ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaactta 503  Q
    ||||||||  |||||||||| ||||||||| |||||| ||||| |||| |||||||||||||||||||||||||| |||||||| |||||||| || |||    
T  27131736 ggtcacaatcctatcatacacaaaacttacactcaaattatcctcatggaagagagaaacgagtcacaagttgcactgtatgaacatgtgtaccaattta 27131835  T
Q  504 cattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttac 554  Q
    ||| |||||||  ||||| || |||||||| |||||||||||||||||||||    
T  27131836 catccaatcaatgcaatttaagttcattttcttaaatgtctttacaatttac 27131887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 371 - 554
Target Start/End: Complemental strand, 22684778 - 22684592
Alignment:
Q  371 tttgtataaatagtagttttccctagaaaaa-agggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtc 468  Q
    |||||||||||||||||||||  ||| |||| |||||||||| || ||||||| |||||||||||||||| ||| |||| ||| ||| || ||| |||||    
T  22684778 tttgtataaatagtagttttctttaggaaaacagggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaatgagtc 22684679  T
Q  469 acaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||||||| |||||||  ||||||| ||||| |||||||||||  |||||  ||| ||||| ||||||| ||||| ||||||||    
T  22684678 acaagttgcaaagtatgaacctgtgtaccaactttcattcaatcaatgcaattttaatacatttctttaaatatctttgcaatttac 22684592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 374 - 514
Target Start/End: Original strand, 21550522 - 21550662
Alignment:
Q  374 gtataaatagtagttttccctagaaaaaaggg-tcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    ||||||||||||||||| | ||| ||||| || |||||| || |||||||| ||||||||| ||||||||||||||||  | ||||||||||||| ||||    
T  21550522 gtataaatagtagtttttcataggaaaaacggatcacaattcaatcatacagaaaacttacactcaaactatccgcattca-gagagaaacgagtaacaa 21550620  T
Q  473 gttgcaatgtatgaatatgtgtacaaacttacattcaatcaa 514  Q
    ||  |||||||||||||||||||| || ||||||||||||||    
T  21550621 gtcacaatgtatgaatatgtgtaccaatttacattcaatcaa 21550662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 371 - 554
Target Start/End: Original strand, 21310725 - 21310911
Alignment:
Q  371 tttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtc 468  Q
    |||||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||||    
T  21310725 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtc 21310824  T
Q  469 acaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    | ||||||||||||||||| ||||| || |||||  ||||| || |  |||||  ||| ||||| ||||||||||||| ||||||||    
T  21310825 agaagttgcaatgtatgaacatgtgcaccaacttttattcagtccatgcaatttcaatacatttctttaaatgtctttgcaatttac 21310911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 375 - 554
Target Start/End: Complemental strand, 16406910 - 16406729
Alignment:
Q  375 tataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaag 473  Q
    |||||||||||||||| | || ||||||   |||||||| | ||||||||  |||||||| || ||||||||| |||  |||||||||||||||||||||    
T  16406910 tataaatagtagtttttcataagaaaaacatgtcacaaaccgatcatacacgaaacttacacttaaactatccacattcaagagagaaacgagtcacaag 16406811  T
Q  474 ttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttac 554  Q
    ||  |||||||||| |||||||| || | ||||||||||||  ||||| || || ||||| |||||||||||| ||||||||    
T  16406810 ttataatgtatgaacatgtgtaccaattgacattcaatcaatgcaatttaagtttattttcttaaatgtctttgcaatttac 16406729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 31845802 - 31845674
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||| || |||||||  ||||||||| ||||| ||| |||| ||| ||| || |||||    
T  31845802 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttacactcaatactgtccgtatggaagcgacaaacg 31845703  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  31845702 agtcacaagttgcaaagtatgaatatgtg 31845674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 368 - 493
Target Start/End: Original strand, 29305211 - 29305338
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  29305211 ctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 29305310  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| ||||||| |||||    
T  29305311 gtcacaagttgcaaagtatgaacatgtg 29305338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 1528793 - 1528665
Alignment:
Q  367 tctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||||||||||||| |||||| | || |||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||  || |||||    
T  1528793 tctatttgtataaatagaagtttttcttacgaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaaacgacaaacg 1528694  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  1528693 agtcacaagttgcaaagtatgaatatgtg 1528665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 22809207 - 22809079
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||| ||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| |||  | |||||    
T  22809207 tctatttgtataaatagtggtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcaacaaacg 22809108  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  22809107 agtcacaagttgcaaagtatgaatatgtg 22809079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 374 - 507
Target Start/End: Original strand, 22086398 - 22086533
Alignment:
Q  374 gtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcaca 471  Q
    ||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| || || ||| |||| ||| ||| || ||||||||||||    
T  22086398 gtataaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacacttaatactgtccgtatggaagcgacaaacgagtcaca 22086497  T
Q  472 agttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||| || |||||||||||||||| ||||| ||||    
T  22086498 agttgaaaagtatgaatatgtgtaccaactttcatt 22086533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 369 - 493
Target Start/End: Original strand, 27561892 - 27562018
Alignment:
Q  369 tatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    ||||||||||||||| |||||| | || ||||||  |||||||| || || ||||||||||||||| ||||| ||| |||| ||| ||| || |||||||    
T  27561892 tatttgtataaatagaagtttttcttaagaaaaacaggtcacaattcaataatacaaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 27561991  T
Q  467 tcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||| || |||||||||||||    
T  27561992 tcacaagttgtaaagtatgaatatgtg 27562018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 27901732 - 27901803
Alignment:
Q  79 ttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    ||||||||||||||||||||  |||||| |||   ||||||||||||||||||||| ||||||| |||||||    
T  27901732 ttagccaatatttttaaagggcatcattaaatatagtcaaaataggttgaccttataatcgaaggaattgtt 27901803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 27130166 - 27130256
Alignment:
Q  288 attcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtata 378  Q
    |||||||||||||||| ||| ||||||| |||||||||||  |||||| |||||| | |||||||| || | | ||||||||||| |||||    
T  27130166 attcgaaattcaaatccaatagataagtgttgttagtttatagcagttttagtttcaaattcaaatataggtatttatttctattcgtata 27130256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 368 - 496
Target Start/End: Complemental strand, 41368803 - 41368674
Alignment:
Q  368 ctatttgtataaatagtagttttccct-agaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||| |||||||  || || |||||||||||||| || ||||||| |||| ||||| ||||| | | |||| ||| ||| || ||||||    
T  41368803 ctatctgtataaataatagttttttcttaggaaaaagggtcacaattcaatcatactaaaa-cttacactcaatattgtccgtatggaagcgacaaacga 41368705  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtac 496  Q
    || ||||||||||| ||||||||||||||||    
T  41368704 gttacaagttgcaaagtatgaatatgtgtac 41368674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 50826085 - 50826141
Alignment:
Q  76 gtgttagccaatatttttaaa-ggttatcatttaatgcggtcaaaataggttgacct 131  Q
    ||||||||||||||||||||| || ||||||||||||||||||||  ||||||||||    
T  50826085 gtgttagccaatatttttaaaaggctatcatttaatgcggtcaaagaaggttgacct 50826141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 4362068 - 4361994
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    |||||||||||||||||||| || ||||||| |||||  ||||| |||||||||||| | ||||||  |||||||    
T  4362068 gtgttagccaatatttttaagggctatcattaaatgcactcaaagtaggttgaccttgtaatcgaaagaattgtt 4361994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 368 - 496
Target Start/End: Complemental strand, 41383710 - 41383581
Alignment:
Q  368 ctatttgtataaatagtagttttccct-agaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||| |||||||  || || |||||||||||||| || ||||||| |||| ||||| ||||| ||| |||  ||| ||| || ||||||    
T  41383710 ctatctgtataaataatagttttttcttaggaaaaagggtcacaattcaatcatactaaaa-cttacactcaatactgtccatatggaagcgacaaacga 41383612  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtac 496  Q
    || |||||| |||| ||||||||||||||||    
T  41383611 gttacaagtcgcaaagtatgaatatgtgtac 41383581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 18530577 - 18530622
Alignment:
Q  405 gtcacaaatctatcatacaaaaaacttacgctcaaactatccgcat 450  Q
    ||||||| || | |||||||||||||||| ||||||||||||||||    
T  18530577 gtcacaattcaaccatacaaaaaacttacactcaaactatccgcat 18530622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 493
Target Start/End: Complemental strand, 22794512 - 22794479
Alignment:
Q  460 aaacgagtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||||||||| |||||||||||||    
T  22794512 aaacgagtcacaagttgcaaagtatgaatatgtg 22794479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 354; Significance: 0; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 99 - 720
Target Start/End: Original strand, 15337037 - 15337655
Alignment:
Q  99 ttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggacttgatgaaaaatactcaaaagcg 198  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||    
T  15337037 ttatcatttaatgcagtcaaaataggttgatcttatcatcgaagaaattgttttctcatt-cctatcgaagttggacttgat-aaaaatactcgaaagcg 15337134  T
Q  199 tgtgtgttagttcgacatgcggaaagttatcgaaggacaattctt-gtgctgattcagataaggacaaacaatggatattttcaagacacattcgaaatt 297  Q
    ||||| ||||||||||| ||||||||||||||||||||| || || ||  || ||||||||||| ||| |||  ||||||||||||||||||||||||||    
T  15337135 tgtgttttagttcgacaggcggaaagttatcgaaggacagttttttgttgtggttcagataaggtcaagcaacagatattttcaagacacattcgaaatt 15337234  T
Q  298 caaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttcccta-g 396  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |    
T  15337235 caaatcgaatggataagtatcgttagtttactgcagttatagttttaaattcaaatctaggcagtaatttctatttgtataaatagtagttttccctagg 15337334  T
Q  397 aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtac 496  Q
     ||||| | |||||| ||||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  15337335 gaaaaaagatcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagcaacgagtcacaagttgcaatgtatgaacatgtgtac 15337434  T
Q  497 aaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacggttattt 595  Q
     || |||||||||||||| |||||| || |||||||  ||||| |||||| |||||||||||| ||||||||||||||||||| |||||||  |||||||    
T  15337435 caatttacattcaatcaatacaatttaagttcatttccttaaaagtctttgcaatttacaatttacttgtttcttttgagcaa-tcatttatcgttattt 15337533  T
Q  596 acaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttcaagaataacattaaatttctggaa 695  Q
    ||||| |||||||||||||||||||||||||||||||||  | |||  ||||||| ||||| ||||||  |||||||||||||||||||||||||| |||    
T  15337534 acaccgatttcgattgggttcaactgggttgaattcgattaccttt--ttactttcttttacttatcaggttcttcaagaataacattaaatttctagaa 15337631  T
Q  696 gataacaagcacaaatatgtcctta 720  Q
     ||||||| ||| ||||||||||||    
T  15337632 aataacaaacac-aatatgtcctta 15337655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 99 - 720
Target Start/End: Original strand, 15426102 - 15426720
Alignment:
Q  99 ttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggacttgatgaaaaatactcaaaagcg 198  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||    
T  15426102 ttatcatttaatgcagtcaaaataggttgatcttatcatcgaagaaattgttttctcatt-cctatcgaagttggacttgat-aaaaatactcgaaagcg 15426199  T
Q  199 tgtgtgttagttcgacatgcggaaagttatcgaaggacaattctt-gtgctgattcagataaggacaaacaatggatattttcaagacacattcgaaatt 297  Q
    ||||| ||||||||||| ||||||||||||||||||||| || || ||  || ||||||||||| ||| |||  ||||||||||||||||||||||||||    
T  15426200 tgtgttttagttcgacaggcggaaagttatcgaaggacagttttttgttgtggttcagataaggtcaagcaacagatattttcaagacacattcgaaatt 15426299  T
Q  298 caaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttcccta-g 396  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |    
T  15426300 caaatcgaatggataagtatcgttagtttactgcagttatagttttaaattcaaatctaggcagtaatttctatttgtataaatagtagttttccctagg 15426399  T
Q  397 aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtac 496  Q
     ||||| | |||||| ||||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  15426400 gaaaaaagatcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagcaacgagtcacaagttgcaatgtatgaacatgtgtac 15426499  T
Q  497 aaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacggttattt 595  Q
     || |||||||||||||| |||||| || |||||||  ||||| |||||| |||||||||||| ||||||||||||||||||| |||||||  |||||||    
T  15426500 caatttacattcaatcaatacaatttaagttcatttccttaaaagtctttgcaatttacaatttacttgtttcttttgagcaa-tcatttatcgttattt 15426598  T
Q  596 acaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttcaagaataacattaaatttctggaa 695  Q
    ||||| |||||||||||||||||||||||||||||||||  | |||  ||||||| ||||| ||||||  |||||||||||||||||||||||||| |||    
T  15426599 acaccgatttcgattgggttcaactgggttgaattcgattaccttt--ttactttcttttacttatcaggttcttcaagaataacattaaatttctagaa 15426696  T
Q  696 gataacaagcacaaatatgtcctta 720  Q
     ||||||| ||| ||||||||||||    
T  15426697 aataacaaacac-aatatgtcctta 15426720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 99 - 720
Target Start/End: Original strand, 15517406 - 15518024
Alignment:
Q  99 ttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggacttgatgaaaaatactcaaaagcg 198  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||    
T  15517406 ttatcatttaatgcagtcaaaataggttgatcttatcatcgaagaaattgttttctcatt-cctatcgaagttggacttgat-aaaaatactcgaaagcg 15517503  T
Q  199 tgtgtgttagttcgacatgcggaaagttatcgaaggacaattctt-gtgctgattcagataaggacaaacaatggatattttcaagacacattcgaaatt 297  Q
    ||||| ||||||||||| ||||||||||||||||||||| || || ||  || ||||||||||| ||| |||  ||||||||||||||||||||||||||    
T  15517504 tgtgttttagttcgacaggcggaaagttatcgaaggacagttttttgttgtggttcagataaggtcaagcaacagatattttcaagacacattcgaaatt 15517603  T
Q  298 caaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttcccta-g 396  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |    
T  15517604 caaatcgaatggataagtatcgttagtttactgcagttatagttttaaattcaaatctaggcagtaatttctatttgtataaatagtagttttccctagg 15517703  T
Q  397 aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtac 496  Q
     ||||| | |||||| ||||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  15517704 gaaaaaagatcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagcaacgagtcacaagttgcaatgtatgaacatgtgtac 15517803  T
Q  497 aaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacggttattt 595  Q
     || |||||||||||||| |||||| || |||||||  ||||| |||||| |||||||||||| ||||||||||||||||||| |||||||  |||||||    
T  15517804 caatttacattcaatcaatacaatttaagttcatttccttaaaagtctttgcaatttacaatttacttgtttcttttgagcaa-tcatttatcgttattt 15517902  T
Q  596 acaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttcaagaataacattaaatttctggaa 695  Q
    ||||| |||||||||||||||||||||||||||||||||  | |||  ||||||| ||||| ||||||  |||||||||||||||||||||||||| |||    
T  15517903 acaccgatttcgattgggttcaactgggttgaattcgattaccttt--ttactttcttttacttatcaggttcttcaagaataacattaaatttctagaa 15518000  T
Q  696 gataacaagcacaaatatgtcctta 720  Q
     ||||||| ||| ||||||||||||    
T  15518001 aataacaaacac-aatatgtcctta 15518024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 264 - 642
Target Start/End: Complemental strand, 22698346 - 22697966
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||| | |||||||||||||||| | ||||| | ||||||||||| || |||    
T  22698346 aaacaacggatacttccaagacacattcgaaattcaaatcgaatggataagtatagttagtttactgcagtaaaagtttaaaattcaaatctaggcggtt 22698247  T
Q  364 atttctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaa 462  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  22698246 atttctatttgtataaatagtagttttccctaggaaaaaagggtcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagaaa 22698147  T
Q  463 cgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcac 561  Q
    ||||||||||||||||||||||||| |||||||| || ||||| |||||||| ||| || || |||||||| |||||||||||  || | ||||||| ||    
T  22698146 cgagtcacaagttgcaatgtatgaacatgtgtaccaatttacagtcaatcaatacattttaagttcattttcttaaatgtcttggcagtctacaatttac 22698047  T
Q  562 ttgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagcttttt 642  Q
    |||||||||||||| |||||||||||  |||||||||||  |||||||||||||||||| ||||||||||||| |||||||    
T  22698046 ttgtttcttttgagtaattcatttacctttatttacaccgctttcgattgggttcaactaggttgaattcgattgcttttt 22697966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 286 - 642
Target Start/End: Original strand, 18735283 - 18735633
Alignment:
Q  286 acattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagta 385  Q
    ||||| |||||||||||| ||||| |||| || |||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  18735283 acatttgaaattcaaatcaaatggctaagattagttagttttctgcagttatagttttaaat-caaatctaggcagttatttctatttgtataaatagta 18735381  T
Q  386 gttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtat 484  Q
    ||||  | || |||||||||||||||| || |||||||||||| ||||| |||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  18735382 gtttctcttaagaaaaaagggtcacaattcaatcatacaaaaa-cttacactcaaattatccgcatggaagaaagaaacgagtcacaagttgcaatgtat 18735480  T
Q  485 gaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcat 583  Q
    |||||| ||||| ||  |||||||||||||  ||||| || |||||||| |||||||||||| ||||||       ||||||||||||||||||||||||    
T  18735481 gaatatctgtaccaatctacattcaatcaatgcaatttaagttcattttcttaaatgtctttgcaattt-------acttgtttcttttgagcaattcat 18735573  T
Q  584 ttacggttatttacaccaat-ttcgattgggttcaactgggttgaattcgatagcttttt 642  Q
    | ||  ||||||| |||  | ||||||||||||||||||| ||||||||||| |||||||    
T  18735574 tcacttttatttataccggtcttcgattgggttcaactggattgaattcgattgcttttt 18735633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 368 - 631
Target Start/End: Complemental strand, 41438988 - 41438729
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgag 466  Q
    |||| |||||||||||||||||| | ||| ||||||||||||||| || ||||||| ||||||||||||||||| |||||| ||| ||| ||  ||||||    
T  41438988 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacgctcaaaatatccgtatggaagcgatgaacgag 41438889  T
Q  467 tcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgt 565  Q
    |||||||||||||||||||||||||| ||| ||||||||| || ||||  |||||  ||| ||||| ||||||||||||| ||||||       ||||||    
T  41438888 tcacaagttgcaatgtatgaatatgtataccaacttacatccagtcaatgcaatttcaatacatttctttaaatgtctttgcaattt-------acttgt 41438796  T
Q  566 ttcttttgagcaattcatttacggttatttacacca-atttcgattgggttcaactgggttgaattc 631  Q
    || ||||||| |||||||||||  |||||  || || | ||||||||| ||||||||||||| ||||    
T  41438795 ttattttgagtaattcatttacttttattcgcatcatacttcgattggattcaactgggttggattc 41438729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 368 - 554
Target Start/End: Complemental strand, 29708310 - 29708122
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgag 466  Q
    |||| |||||||||||||||||| | ||| ||||| ||||||||| || ||||||| ||||||||||||||||| | || | ||| ||| ||  ||||||    
T  29708310 ctatctgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacgctcaaattgtctgtatggaagcgactaacgag 29708211  T
Q  467 tcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||  |||||  ||| ||||| ||||||||| ||| ||||||||    
T  29708210 tcacaagttgcaatgtatgaatatgtgcaccaacttacattcaatcaatgcaatttcaatacatttctttaaatgtttttgcaatttac 29708122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 374 - 554
Target Start/End: Original strand, 15911712 - 15911894
Alignment:
Q  374 gtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    ||||||||||||||||| | || | ||||  ||||||||| | |||||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  15911712 gtataaatagtagtttttcataaggaaaataggtcacaaaccaatcatacacaaaacttacactcaaactatccgcattcaagagagaaacgagtcacaa 15911811  T
Q  473 gttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatt-ttttaaatgtctttacaatttac 554  Q
    ||| ||||||||||| |||||||| || ||||||||||||||  ||||| || ||  || | |||| ||||||||||||||||    
T  15911812 gttacaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgttctcttaattgtctttacaatttac 15911894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 360 - 554
Target Start/End: Original strand, 27818173 - 27818371
Alignment:
Q  360 agttatttctatttgtataaatagtagttttccct-agaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaa--ctatccgcatgaaaga 456  Q
    ||||| ||||||| ||||||||||||||||| ||| ||  ||| |||||||||  | || ||||| ||||||||| || |||  ||||||  ||| ||||    
T  27818173 agttacttctattagtataaatagtagtttttccttagggaaaggggtcacaatccaatgatacacaaaacttacacttaaaaactatccatatgcaaga 27818272  T
Q  457 gagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttac 554  Q
    ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||  ||||| || ||  |||| |||||||||||| ||||||||    
T  27818273 gagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgttttcttaaatgtctttgcaatttac 27818371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 17426240 - 17426099
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  17426240 ctatctgtataaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 17426141  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| |||||||||||||||| ||||| ||||    
T  17426140 gtcacaagttgcaaagtatgaatatgtgtaccaactttcatt 17426099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 20193298 - 20193157
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||||||||| ||||||||| ||  |||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  20193298 ctatctgtataaatagtagtttttcttagaaaaaatgggtcacaattcagtcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 20193199  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| |||||||||||||||| ||||| ||||    
T  20193198 gtcacaagttgcaaagtatgaatatgtgtaccaactttcatt 20193157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 368 - 492
Target Start/End: Complemental strand, 22352157 - 22352031
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  22352157 ctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 22352058  T
Q  466 gtcacaagttgcaatgtatgaatatgt 492  Q
    |||||||||||||| ||||||||||||    
T  22352057 gtcacaagttgcaaagtatgaatatgt 22352031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 368 - 502
Target Start/End: Complemental strand, 16668098 - 16667962
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| |||||| |||||||| || ||||||| |||||||||| ||||| ||| |||  ||| ||| || ||||||    
T  16668098 ctatctgtataaatagtagtttttcttaggaaaaagtggtcacaattcaatcatactaaaaacttacactcaatactgtccatatggaagcgacaaacga 16667999  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaactt 502  Q
    || ||||||||||| |||||||||||||||| |||||    
T  16667998 gttacaagttgcaaagtatgaatatgtgtaccaactt 16667962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 371 - 554
Target Start/End: Original strand, 22064583 - 22064769
Alignment:
Q  371 tttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtc 468  Q
    |||||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| || ||   | |||| ||| ||| || |||||||||    
T  22064583 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacacttaatgatgtccgtatggaagcgacaaacgagtc 22064682  T
Q  469 acaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    |||||||||||||||||||  |||| || |||||  ||||| ||||  |||||  ||| ||||| |||||||| |||| ||||||||    
T  22064683 acaagttgcaatgtatgaacgtgtgcaccaacttttattcagtcaatgcaatttcaatacatttctttaaatgactttgcaatttac 22064769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 32116439 - 32116519
Alignment:
Q  94 aaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggac 175  Q
    |||| |||||||||||||| ||||||||| ||||| |||||| |||||||||||||||||| | ||||||||||||||||||    
T  32116439 aaagattatcatttaatgcagtcaaaataagttgatcttatcgtcgaagaaattgttttct-cattcctatcgaagttggac 32116519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 25389127 - 25388999
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| |||||  |||||||| || |||||||  ||||||||| ||||| ||| |||| ||| ||| || |||||    
T  25389127 tctatttgtataaatagtagtttttcttaggaaaaattggtcacaattcaatcatactcaaaacttacactcaatactgtccgtatggaagcgacaaacg 25389028  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| ||||||| |||||    
T  25389027 agtcacaagttgcaaagtatgaacatgtg 25388999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 418 - 514
Target Start/End: Original strand, 18846794 - 18846889
Alignment:
Q  418 catacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaa 514  Q
    |||||| ||||||||| || |||||||||| ||  | ||||||||||||| ||||||   ||||||||||| |||||||||| ||||||||||||||    
T  18846794 catacagaaaacttacacttaaactatccgtatcta-gagagaaacgagtaacaagtcagaatgtatgaatctgtgtacaaatttacattcaatcaa 18846889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 22698525 - 22698471
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgacc 130  Q
    |||||||||| |||||||||||| ||||||| ||||| |||||||||||||||||    
T  22698525 gtgttagccagtatttttaaaggctatcattaaatgcagtcaaaataggttgacc 22698471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 514
Target Start/End: Complemental strand, 22698843 - 22698726
Alignment:
Q  396 gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgta 495  Q
    |||||||||||||||| || | |||||| ||||||||| |||||| ||||||||||  ||||||||| |||| |||| |   ||||||||||||||  ||    
T  22698843 gaaaaaagggtcacaattcaaccatacagaaaacttacactcaaattatccgcatg-tagagagaaatgagttacaaatcaaaatgtatgaatatgcata 22698745  T
Q  496 caaacttacattcaatcaa 514  Q
    | || |||| |||||||||    
T  22698744 ccaatttactttcaatcaa 22698726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 429 - 514
Target Start/End: Complemental strand, 17637949 - 17637865
Alignment:
Q  429 cttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaa 514  Q
    ||||| ||||||||||||||||  | ||||||||||||| ||||||  ||||||||||||  |||||| || ||||||||||||||    
T  17637949 cttacactcaaactatccgcattca-gagagaaacgagtaacaagtcacaatgtatgaatccgtgtaccaatttacattcaatcaa 17637865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 12821367 - 12821239
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaagg-gtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||||||||||||| |||||| | ||| |||||   ||||||| || |||||||  |||||||||  |||| ||| |||| ||| ||| || |||||    
T  12821367 tctatttgtataaatagcagtttttcttaggaaaaacatgtcacaattcaatcatactcaaaacttacaatcaatactgtccgtatggaagcgacaaacg 12821268  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||| ||||||||| |||||||||||||    
T  12821267 agtcataagttgcaaagtatgaatatgtg 12821239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 18735078 - 18735121
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaa 119  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||    
T  18735078 gtgttagccaatatttttaaaggctatcatttaatacggtcaaa 18735121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 341; Significance: 0; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 77 - 693
Target Start/End: Original strand, 37130105 - 37130721
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggact 176  Q
    ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  37130105 tgttaaccaatatttttaaaggctatcatttaatgcagtcaaaataggttgaccttatcatcgaagaaattgttttctcatt-cctatcgaagttggact 37130203  T
Q  177 tgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaa-gttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggata 275  Q
    || |||||| | ||| ||||| ||||| ||||||||||| ||| ||| |||| |||||||||||| | ||  || ||| ||||||| ||| ||| |||||    
T  37130204 tgctgaaaa-tgctcgaaagcatgtgttttagttcgacaggcgaaaaagttaccgaaggacaatt-tggttgtggttcggataaggtcaagcaacggata 37130301  T
Q  276 ttttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgt 375  Q
    |||||||||||| ||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  37130302 ttttcaagacacgttcgaaattcaaatcaaatggataagtatcgttagtttactgcagttatagttttaaattcaaatctaggcagttatttctatttgt 37130401  T
Q  376 ataaatagtag-ttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaag 473  Q
    ||||||||||| ||||||||| | |||||||||| ||| || ||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||    
T  37130402 ataaatagtagtttttccctagggaaaaagggtcgcaattcaatcatacaaaaaacttacaatcaaattatccgcatggaagagagaaacgagtcacaag 37130501  T
Q  474 ttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttctttt 572  Q
    |||||||||||||| |||||||| || |||||||||||||  |||||| || |||||||  ||||||||||||| |||||||| || |||||||||||||    
T  37130502 ttgcaatgtatgaacatgtgtaccaatttacattcaatcagtacaatttaagttcatttccttaaatgtctttataatttacagtttacttgtttctttt 37130601  T
Q  573 gagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttca 672  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||||| || ||||||| ||||||| |||| |||||||| |||||||    
T  37130602 gagcaattcatttaccgttatttacaccgatttcgattgggttcaactaagttgaattcaattgcttttt-ttactttcttttctttatcaagttcttca 37130700  T
Q  673 agaataacattaaatttctgg 693  Q
    |||||||||||||||||||||    
T  37130701 agaataacattaaatttctgg 37130721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 77 - 709
Target Start/End: Complemental strand, 28568148 - 28567522
Alignment:
Q  77 tgttagccaatatttttaaa-ggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggac 175  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||    
T  28568148 tgttagccaatatttttaaaaggttatcatttaatgcagtcaaaataggttgaccttatcatcgaagaaattgttttctcatt-cctatcgaagttagac 28568050  T
Q  176 ttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggata 275  Q
    ||| |||||||  ||| ||||| ||||| ||| ||||||| ||| ||||||||||||||||| || ||||  || ||||||||||| ||| |||   | |    
T  28568049 ttgctgaaaaag-ctcgaaagcatgtgt-ttaattcgacaggcgaaaagttatcgaaggacagtt-ttgttgtggttcagataaggtcaagcaacaaaca 28567953  T
Q  276 ttttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgt 375  Q
    |||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  28567952 ttttcaagaca--ttcgaaattcaaatcgaatggataagtatcgttagtttactgcagttatagttttaaattcaaatctaggcagttatttctatttgt 28567855  T
Q  376 ataaatagtagttttccct-agaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagt 474  Q
    | ||||||||||||||| | || ||||| |||||||| |||||||||| |||||||||| |||||| |||||||||| |||||||||| |||||||||||    
T  28567854 agaaatagtagttttccttcaggaaaaaaggtcacaattctatcatac-aaaaacttacactcaaattatccgcatggaagagagaaatgagtcacaagt 28567756  T
Q  475 tgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttg 573  Q
    ||||||||||||| |||||||| || |||||||||||||| | |||| || |||||||  |||||||||||| |||||||||| | | ||||||||||||    
T  28567755 tgcaatgtatgaacatgtgtaccaatttacattcaatcaatataatttaagttcatttccttaaatgtctttgcaatttacaacttaattgtttcttttg 28567656  T
Q  574 agcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttcaa 673  Q
    |||||||||||||  |||| |||||||  ||||||||||||||||||| ||||||||| ||  | |||  ||||||| |||||||||||| |||||||||    
T  28567655 agcaattcatttatcgttaattacaccggtttcgattgggttcaactgagttgaattcaattaccttt--ttactttcttttatttatcacattcttcaa 28567558  T
Q  674 gaataacattaaatttctggaagataacaagcacaa 709  Q
    ||||| |||||||||| ||||| ||||||| |||||    
T  28567557 gaatagcattaaatttttggaaaataacaaacacaa 28567522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 290 - 703
Target Start/End: Complemental strand, 23815215 - 23814802
Alignment:
Q  290 tcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttt 389  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  23815215 tcgaaattcaaatcgaatggataagtatagttagtttactgcagttatagttttaaattcaaatctaggcagttatttctatttgtataaatagtagttt 23815116  T
Q  390 tcccta--gaaaaaagggtcacaaatctatcatac-aaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatga 486  Q
    ||||||  |||||||||||||||| |||||||||| ||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  23815115 tccctaaggaaaaaagggtcacaattctatcatacaaaaaaacttacactaaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatga 23815016  T
Q  487 atatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcattt 585  Q
    | |||||||| || |||||||||||||| ||| || || |||||||| |||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  23815015 acatgtgtaccaatttacattcaatcaatacactttaagttcattttcttaaatgtctttgcagtttacaatttacttgtttcttttgagcaattcattt 23814916  T
Q  586 acggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttcaagaataacattaa 685  Q
    ||  |||||||||||  ||| |||||||||||| |||||||||||| ||   | ||| ||||||| | |||||||| || |||||||| ||||| |||||    
T  23814915 acctttatttacaccggttttgattgggttcaagtgggttgaattcaat---tgttttttactttctcttatttattaagttcttcaa-aataatattaa 23814820  T
Q  686 atttctggaagataacaa 703  Q
    |||| ||||| |||||||    
T  23814819 atttttggaaaataacaa 23814802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 76 - 695
Target Start/End: Complemental strand, 21256901 - 21256303
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggac 175  Q
    |||||||||  |||||| ||||| ||||||||||||| |||||||||| |||| ||| |||||||| ||||||||||||| |||  |||| |||||||||    
T  21256901 gtgttagccggtattttcaaaggctatcatttaatgcagtcaaaatagattgatcttgtcatcgaataaattgttttctctttta-tatcaaagttggac 21256803  T
Q  176 ttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaa-gttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggat 274  Q
    ||| |||||| | ||| |||||| |||| ||||||||||| ||| ||| ||||||||||| || || ||||  || ||  ||||||| ||| ||| | ||    
T  21256802 ttgctgaaaa-tgctcgaaagcgcgtgttttagttcgacaggcgaaaaagttatcgaagggcagtt-ttgttgtggtttggataaggtcaagcaacgaat 21256705  T
Q  275 attttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttg 374  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||| |||| || | |||||||||||||||    
T  21256704 attttcaagacacattcaaaattcaaatcgaatggataagtattgttagtttaccacagttatagttttaaatttaaatataggtagttatttctatttg 21256605  T
Q  375 tataaatagtagttttccct-agaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaag 473  Q
    |||||||||||||||||||| || ||||  |||||||| || |||||||||||||||||| |||||| |||||||||| |||||||||||||||||        
T  21256604 tataaatagtagttttccctaaggaaaagtggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtca---- 21256509  T
Q  474 ttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttctttt 572  Q
       ||||||||||| |||||||| || ||||||||||||||  ||||| || || ||||| |||||||||||||||||||       |||||||||||||    
T  21256508 ---caatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttattttcttaaatgtctttacaattt-------acttgtttctttt 21256419  T
Q  573 gagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttca 672  Q
    |||||||||||||||  || |||||||| ||||| ||||  ||||||||||||||||||||| |||||   ||||||| |    |||||| | |||||||    
T  21256418 gagcaattcatttacctttgtttacaccgatttcaattgaattcaactgggttgaattcgattgcttt---ttactttct----tttatcgagttcttca 21256326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 272 - 709
Target Start/End: Complemental strand, 34827864 - 34827439
Alignment:
Q  272 gatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctat 371  Q
    |||| |||||| | |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| | ||||||||||||    
T  34827864 gatactttcaaaatacattcgaaattcaaatcgaatggataagtattgttagtttaccgcagttatagttttaaattcaaatctaggtagttatttctat 34827765  T
Q  372 ttgtataaatagtagtttt-ccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcac 470  Q
    || |||||||||||||||| |||||| |||||||||||||| || |||||||||||||||||| |||||| |||| ||||| ||||||||||||||||||    
T  34827764 ttatataaatagtagtttttccctaggaaaaagggtcacaattcaatcatacaaaaaacttacactcaaattatctgcatggaagagagaaacgagtcac 34827665  T
Q  471 aagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttct 569  Q
    |||||| |||||||||| |||||||| || ||||||||||||||  ||||| || |||||||| ||||||||||||||| |||       ||||||||||    
T  34827664 aagttgtaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagttcattttcttaaatgtctttacagttt-------acttgtttct 34827572  T
Q  570 tttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattct 669  Q
    ||||||||||||||||||  ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||   ||||||| |    |||||||| ||||    
T  34827571 tttgagcaattcatttacctttatttacaccgatttcgattggattcaagtgggttgaattcgattgcttt---ttactttct----tttatcaagttct 34827479  T
Q  670 tcaagaataacattaaatttctggaagataacaagcacaa 709  Q
    ||||||| || ||||||||||||||| ||||||| |||||    
T  34827478 tcaagaacaatattaaatttctggaaaataacaaacacaa 34827439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 77 - 496
Target Start/End: Complemental strand, 23870950 - 23870534
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggact 176  Q
    ||||| |||||||||||||||| ||| || |||||| ||||||||||||||||||| |||||||||||||||||||||| | ||| ||||||||||||||    
T  23870950 tgttaaccaatatttttaaaggctataatataatgcagtcaaaataggttgaccttctcatcgaagaaattgttttctc-tctccgatcgaagttggact 23870852  T
Q  177 tgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggatat 276  Q
    || |||||| | ||| ||||||||||| ||||||||||  |||||||||||||||||| || || ||||  || ||| ||||||| ||| |||  |||||    
T  23870851 tgctgaaaa-tgctcgaaagcgtgtgttttagttcgacgggcggaaagttatcgaagggcagtt-ttgttgtggttcggataaggtcaagcaacagatat 23870754  T
Q  277 tttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgta 376  Q
    || |||||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||||    
T  23870753 tt-caagacactttcgaaattcaaatcgaatgaataagtattgttagtttactgccgttatagttttaaattcaaatctaggtagttatttctatttgta 23870655  T
Q  377 taaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagtt 475  Q
    |||||||||||||| |||| ||||||| |||||||| || |||||||||||||||||| |||||| |||  ||| || ||||||||||||||||||||||    
T  23870654 taaatagtagtttttcctaaaaaaaagtggtcacaattcaatcatacaaaaaacttacactcaaattatttgcacgagagagagaaacgagtcacaagtt 23870555  T
Q  476 gcaatgtatgaatatgtgtac 496  Q
    |||||||||||| ||||||||    
T  23870554 gcaatgtatgaacatgtgtac 23870534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 264 - 703
Target Start/End: Complemental strand, 23803613 - 23803181
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| ||||| || |||||| ||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||| | ||||    
T  23803613 aaacaacggatacttccaagactcattcgaaattcaaatcgagtggataagtatagttagtttactgcagttatagttttaaattcaaatctaggtagtt 23803514  T
Q  364 atttctatttgtataaatagtagttttccct----agaaaaaagggtcacaaatctatcatac-aaaaaacttacgctcaaactatccgcatgaaagaga 458  Q
    ||||||||||||||||||||||||||| |||    | ||||||||||||||| |||||||||| ||||||||| | |||||| |||||||||| ||||||    
T  23803513 atttctatttgtataaatagtagtttttcctataaataaaaaagggtcacaattctatcatacaaaaaaacttgcactcaaattatccgcatggaagaga 23803414  T
Q  459 gaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacaca-attcaaattcatttt-ttaaatgtctttacaatttacaa 556  Q
    ||||||||| ||||||||||||||||||| |||||||| || |||||||||||||| |||  || || |||||||| |||||| |||||||||| |||||    
T  23803413 gaaacgagtaacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatacacttttaagttcattttcttaaatatctttacaatctacaa 23803314  T
Q  557 ttcacttgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttatttta 656  Q
    || ||||||||||||||||||||||||||||  |||||||||||          || ||||| ||||||||||||||| |||||   ||||||| || ||    
T  23803313 tttacttgtttcttttgagcaattcatttacctttatttacacc----------ggtttcaattgggttgaattcgattgcttt---ttactttcttcta 23803227  T
Q  657 tttatcaaattcttcaagaataacattaaatttctggaagataacaa 703  Q
    |||||||| |||||||| ||||| ||||||||||||||| |||||||    
T  23803226 tttatcaagttcttcaa-aataatattaaatttctggaaaataacaa 23803181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 77 - 496
Target Start/End: Original strand, 22707874 - 22708291
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggact 176  Q
    ||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||    
T  22707874 tgttaaccaatatttttaaaggctataatttaatgcagtcaaaataggttgaccttgtcatcgaagaaattgttttct-ctctccgatcgaagttggact 22707972  T
Q  177 tgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgc-ggaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggata 275  Q
    || || ||||| ||| ||||||||||| ||||||||||  ||   ||||||||| ||||||| || ||||  || ||| ||||||| ||| |||  ||||    
T  22707973 tgctg-aaaatgctcgaaagcgtgtgttttagttcgacgggcaaaaaagttatccaaggacagtt-ttgttgtggttcggataaggtcaagcaacagata 22708070  T
Q  276 ttttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgt 375  Q
     ||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||||| | |||||||||||||| |    
T  22708071 -tttcaagacacattcgaaattcaaatcgaatggataagtattattaatttactgcagttatagttttaaattcaaatctaggtagttatttctatttct 22708169  T
Q  376 ataaatagtagttttccct-agaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagt 474  Q
    ||||||||||||||| ||| || ||||  |||||||| || || ||||||||||||||| || ||| |||||||||| ||||||||||||| |||||| |    
T  22708170 ataaatagtagtttttcctcaggaaaagtggtcacaattcaattatacaaaaaacttacacttaaattatccgcatgcaagagagaaacgaatcacaaat 22708269  T
Q  475 tgcaatgtatgaatatgtgtac 496  Q
    ||||||||||||| ||||||||    
T  22708270 tgcaatgtatgaacatgtgtac 22708291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 442 - 703
Target Start/End: Complemental strand, 23829908 - 23829650
Alignment:
Q  442 tatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatg 540  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||| || || |||||||| |||||||    
T  23829908 tatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatacactttaagttcattttcttaaatg 23829809  T
Q  541 tctttacaatttacaattcacttgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagcttt 640  Q
    ||||| || | ||||||| ||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||| ||||||||||||| |||||    
T  23829808 tctttgcagtctacaatttacttgtttcttttgagcaattcatttacctttatttacaccggtttcgattgggttcaactaggttgaattcgattgcttt 23829709  T
Q  641 ttcttactttattttatttatcaaattcttcaagaataacattaaatttctggaagataacaa 703  Q
       | ||||| || |||||||||| |||||||| ||||| || |||||||||||| |||||||    
T  23829708 ---taactttcttctatttatcaagttcttcaa-aataaaataaaatttctggaaaataacaa 23829650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 350 - 611
Target Start/End: Original strand, 22593716 - 22593972
Alignment:
Q  350 aaatctatgcagttatttctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgc 448  Q
    ||||||| | |||||||| ||||||||||||||||||||||  ||| |  ||||||||||||| || |||||||||||||||||| |||||| ||| |||    
T  22593716 aaatctaggtagttatttatatttgtataaatagtagttttttctaagggaaaagggtcacaattcaatcatacaaaaaacttacactcaaattatgcgc 22593815  T
Q  449 atgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttac 547  Q
    ||| ||||||||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||  ||||| || |||||||| ||||||||||||||    
T  22593816 atggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttatattcaatcaatgcaatttaagttcattttcttaaatgtctttac 22593915  T
Q  548 aatttacaattcacttgtttcttttgagcaattcatttacggttatttacaccaatttcgattg 611  Q
    |||||       |||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  22593916 aattt-------acttgtttcttttgagcaattcgtttacctttatttacaccaatttcgattg 22593972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 288 - 634
Target Start/End: Complemental strand, 16664904 - 16664561
Alignment:
Q  288 attcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatt-tctatttgtataaatagtag 386  Q
    |||||| |||||||||| |||| |||| || | |||||| || |||||||||||||| | |  || ||| | ||||||  ||||||||||||||||||||    
T  16664904 attcgatattcaaatcgtatggctaagattaggtagttttctacagttatagttttaaaatttaaactaggtagttatcctctatttgtataaatagtag 16664805  T
Q  387 ttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatg 485  Q
    |||| | ||||||||| ||||||||| || ||||||| |||||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||||||    
T  16664804 tttttcttagaaaaaaagggtcacaattcaatcatactaaaaacttacgctcaaactatccgtatggaagcgataaacgagtcacaagttgcaatgtatg 16664705  T
Q  486 aatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatt 584  Q
    ||| | ||||| ||| |||||||| ||||  ||||| || ||||||| ||||||||||||| ||||||       |||||||| ||||||| ||||||||    
T  16664704 aatctatgtaccaacctacattcagtcaatgcaatttaagttcatttctttaaatgtctttgcaattt-------acttgtttattttgagtaattcatt 16664612  T
Q  585 tacggttatttaca-ccaatttcgattgggttcaactgggttgaattcgat 634  Q
    |||  |||||  || |  | ||||||||| |||||||||||||||||||||    
T  16664611 tacttttattcgcatcgtacttcgattggattcaactgggttgaattcgat 16664561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 288 - 634
Target Start/End: Original strand, 22880857 - 22881199
Alignment:
Q  288 attcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatt-tctatttgtataaatagtag 386  Q
    |||||| ||| |||||| |||| |||| || | |||||| ||||||||||||||||| ||||||| ||| | ||||||  ||||||||||||||||||||    
T  22880857 attcgatatttaaatcgtatggctaagattaggtagttttctgcagttatagttttaaattcaaa-ctaggtagttatcctctatttgtataaatagtag 22880955  T
Q  387 ttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatg 485  Q
    |||| | ||| ||||||| ||||||| || ||||||| |||||| || |||||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  22880956 tttttcttaggaaaaaagtgtcacaattcaatcatactaaaaacatatgctcaaactatccgtatgaaagcgataaacgagtcacaagttgcaatgtatg 22881055  T
Q  486 aatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatt 584  Q
    ||||||||||| || ||||||||| ||||   |||| |||| ||||| ||||||||||||| ||||||       |||||||| ||||||| ||||||||    
T  22881056 aatatgtgtaccaagttacattcactcaatgaaatttaaatgcatttctttaaatgtctttgcaattt-------acttgtttattttgagtaattcatt 22881148  T
Q  585 tacggttatttacacca-atttcgattgggttcaactgggttgaattcgat 634  Q
    |||  |||||  || || | ||||||||| ||||| ||||||| |||||||    
T  22881149 tacctttattcgcatcatacttcgattggattcaattgggttggattcgat 22881199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 368 - 634
Target Start/End: Original strand, 31817908 - 31818170
Alignment:
Q  368 ctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgag 466  Q
    |||| |||||||||||||||||| | || |||||| ||||||||| || ||| ||| ||||| |||||||||||||||||| ||| ||| || |||||||    
T  31817908 ctatctgtataaatagtagtttttcttatgaaaaacgggtcacaattcaatcgtactaaaaatttacgctcaaactatccgtatggaagcgataaacgag 31818007  T
Q  467 tcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgt 565  Q
    |||||||||||||| |||||||||| |||| |||||||||||| ||||  |||||  ||||||||| ||||||||| ||| ||||||       ||||||    
T  31818008 tcacaagttgcaatatatgaatatgagtaccaacttacattcagtcaatgcaatttcaattcatttctttaaatgtttttgcaattt-------acttgt 31818100  T
Q  566 ttcttttgagcaattcatttacggttatttacacca-atttcgattgggttcaactgggttgaattcgat 634  Q
    || ||||||| |||||||||||  | |||  || || | ||||||||| |||||| ||||||||||||||    
T  31818101 ttattttgagtaattcatttactttcattcgcatcatacttcgattggattcaaccgggttgaattcgat 31818170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 360 - 554
Target Start/End: Complemental strand, 10480552 - 10480355
Alignment:
Q  360 agttatttctatttgtataaatagtagttttcccta--gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagag 457  Q
    ||||||||||||| ||||||||||||||||| |||   |  |||||||||||||  | |||||||| ||||||||| ||| ||||||||||||  |||||    
T  10480552 agttatttctattagtataaatagtagtttttccttaggggaaaagggtcacaatccaatcatacacaaaacttacactcgaactatccgcattcaagag 10480453  T
Q  458 agaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttac 554  Q
    |||||| |||| |||||||||||||||||| |||||||| || ||||||||||||||  ||||| || ||  |||| |||||||||||| ||||||||    
T  10480452 agaaacaagtcgcaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgttttcttaaatgtctttgcaatttac 10480355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 21905078 - 21904968
Alignment:
Q  404 ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaactta 503  Q
    ||||||||| | |||||||||||||||||| |||||||||||| |||  ||||||| ||||||||||||||| ||||||||||| |||||||| || |||    
T  21905078 ggtcacaaaccaatcatacaaaaaacttacactcaaactatccacattcaagagaggaacgagtcacaagttacaatgtatgaacatgtgtaccaattta 21904979  T
Q  504 cattcaatcaa 514  Q
    |||||||||||    
T  21904978 cattcaatcaa 21904968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 416 - 533
Target Start/End: Complemental strand, 25349369 - 25349252
Alignment:
Q  416 atcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaac 515  Q
    |||||||| ||||||||| ||||||||||||||||  ||||||| ||||||||| ||||||||||||||| |||||||||| || ||||||||||||||     
T  25349369 atcatacacaaaacttacactcaaactatccgcattcaagagaggaacgagtcataagttgcaatgtatggatatgtgtaccaatttacattcaatcaat 25349270  T
Q  516 acaattcaaattcatttt 533  Q
     ||||| || ||||||||    
T  25349269 gcaatttaagttcatttt 25349252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 405 - 511
Target Start/End: Original strand, 20524168 - 20524274
Alignment:
Q  405 gtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttac 504  Q
    ||||||| || |||||||| ||||||||| ||||||||||||||||  |||||| ||||||||||||||||||||||||||||| | ||||| || ||||    
T  20524168 gtcacaattcaatcatacagaaaacttacactcaaactatccgcatttaagagaaaaacgagtcacaagttgcaatgtatgaatttttgtaccaatttac 20524267  T
Q  505 attcaat 511  Q
    |||||||    
T  20524268 attcaat 20524274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 373 - 507
Target Start/End: Complemental strand, 23190390 - 23190254
Alignment:
Q  373 tgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | ||| ||||| ||||||||| || ||| ||| |||||||||| ||||| ||| |||| ||| ||| || |||||||||||    
T  23190390 tgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcgtactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcac 23190291  T
Q  471 aagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  23190290 aagttgcaaagtatgaatatgtgtacaaactttcatt 23190254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 373 - 507
Target Start/End: Complemental strand, 23611645 - 23611509
Alignment:
Q  373 tgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | ||| ||||| ||||||||| || ||| ||| |||||||||| ||||| ||| |||| ||| ||| || |||||||||||    
T  23611645 tgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcgtactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcac 23611546  T
Q  471 aagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  23611545 aagttgcaaagtatgaatatgtgtacaaactttcatt 23611509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 383 - 514
Target Start/End: Complemental strand, 23769511 - 23769379
Alignment:
Q  383 gtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatg 481  Q
    |||||||||| ||| ||||| |||||| |||   |||||||| |||| |||| |||||| |||||||||  ||||||||||||||||||||||| |||||    
T  23769511 gtagttttccataggaaaaacgggtcataaactaatcatacacaaaatttacactcaaattatccgcattcaagagagaaacgagtcacaagttacaatg 23769412  T
Q  482 tatgaatatgtgtacaaacttacattcaatcaa 514  Q
    |||||| |||||||| || ||||||||||||||    
T  23769411 tatgaacatgtgtaccaatttacattcaatcaa 23769379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 371 - 554
Target Start/End: Complemental strand, 39227591 - 39227405
Alignment:
Q  371 tttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtc 468  Q
    |||||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||  || |||||| ||    
T  39227591 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaatcgacaaacgaatc 39227492  T
Q  469 acaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||||||||||||||| ||||| || |||||  ||||| ||||  |||||  ||| ||||| |||||| |||||| ||||||||    
T  39227491 acaagttgcaatgtatgaacatgtgcaccaacttttattcagtcaatgcaatttcaatacatttctttaaacgtctttgcaatttac 39227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 373 - 507
Target Start/End: Original strand, 22648571 - 22648707
Alignment:
Q  373 tgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | ||| |||||  |||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||||||    
T  22648571 tgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcac 22648670  T
Q  471 aagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||| |||||||||||||||| ||||| ||||    
T  22648671 aagttgcaaagtatgaatatgtgtaccaactttcatt 22648707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 373 - 507
Target Start/End: Complemental strand, 23204006 - 23203870
Alignment:
Q  373 tgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | ||| ||||| ||||||||| || ||| ||| |||||||||| ||||| ||| |||| ||| ||| || ||| |||||||    
T  23204006 tgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcgtactaaaaacttacactcaatactgtccgtatggaagcgacaaatgagtcac 23203907  T
Q  471 aagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||| |||||||||||||||| ||||| ||||    
T  23203906 aagttgcaaagtatgaatatgtgtaccaactttcatt 23203870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 373 - 496
Target Start/End: Complemental strand, 23615250 - 23615125
Alignment:
Q  373 tgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | ||| |||||  |||||||| || ||||||| |||||||||| ||||| ||| || | ||| ||| || |||||||||||    
T  23615250 tgtataaatagtagtttttcttaggaaaaataggtcacaattcaatcatactaaaaacttacactcaatactgtctgtatggaagcgacaaacgagtcac 23615151  T
Q  471 aagttgcaatgtatgaatatgtgtac 496  Q
    ||||||||| ||||||||||||||||    
T  23615150 aagttgcaaagtatgaatatgtgtac 23615125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 374 - 509
Target Start/End: Complemental strand, 30052039 - 30051903
Alignment:
Q  374 gtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    ||||||||||||| ||| | ||| ||||| ||||||||| || |||||||| ||||||||| ||||||||||||||||   |||||||||||||| ||||    
T  30052039 gtataaatagtagcttttcataggaaaaatgggtcacaattcaatcatacagaaaacttacactcaaactatccgcat-tcagagagaaacgagtaacaa 30051941  T
Q  473 gttgcaatgta-tgaatatgtgtacaaacttacattca 509  Q
    ||  ||||||| ||||| ||||||| || |||||||||    
T  30051940 gtcacaatgtattgaatctgtgtaccaatttacattca 30051903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 374 - 509
Target Start/End: Complemental strand, 30143083 - 30142947
Alignment:
Q  374 gtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    ||||||||||||| ||| | ||| ||||| ||||||||| || |||||||| ||||||||| ||||||||||||||||   |||||||||||||| ||||    
T  30143083 gtataaatagtagcttttcataggaaaaatgggtcacaattcaatcatacagaaaacttacactcaaactatccgcat-tcagagagaaacgagtaacaa 30142985  T
Q  473 gttgcaatgta-tgaatatgtgtacaaacttacattca 509  Q
    ||  ||||||| ||||| ||||||| || |||||||||    
T  30142984 gtcacaatgtattgaatctgtgtaccaatttacattca 30142947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 509
Target Start/End: Complemental strand, 30090031 - 30089918
Alignment:
Q  396 gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgta-tgaatatgtgt 494  Q
    |||||| ||||||||| || |||||||| ||||||||| ||||||||||||||||   ||||||||| |||| ||||||  ||||||| |||||||||||    
T  30090031 gaaaaacgggtcacaattcaatcatacagaaaacttacactcaaactatccgcat-tcagagagaaatgagtaacaagtcacaatgtattgaatatgtgt 30089933  T
Q  495 acaaacttacattca 509  Q
    || || |||||||||    
T  30089932 accaatttacattca 30089918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 509
Target Start/End: Complemental strand, 30126636 - 30126523
Alignment:
Q  396 gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgta-tgaatatgtgt 494  Q
    |||||| ||||||||| || |||||||| ||||||||| ||||||||||||||||   ||||||||| |||| ||||||  ||||||| |||||||||||    
T  30126636 gaaaaacgggtcacaattcaatcatacagaaaacttacactcaaactatccgcat-tcagagagaaatgagtaacaagtcacaatgtattgaatatgtgt 30126538  T
Q  495 acaaacttacattca 509  Q
    || || |||||||||    
T  30126537 accaatttacattca 30126523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 23803792 - 23803720
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgt 149  Q
    ||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||| | ||||||| ||||||    
T  23803792 tgttagccaatatttttaagggctatcattaaatgcagtcaaaataggttgaccttgtaatcgaaggaattgt 23803720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 367 - 493
Target Start/End: Original strand, 24896625 - 24896753
Alignment:
Q  367 tctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | || |||||| ||||||||| || |||||||  ||||||||| ||||| ||| | || ||| ||| || ||||     
T  24896625 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttacactcaatactgttcgtatggaagcgacaaact 24896724  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| ||||||| |||||    
T  24896725 agtcacaagttgcaaagtatgaacatgtg 24896753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 373 - 488
Target Start/End: Original strand, 22633822 - 22633939
Alignment:
Q  373 tgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | | | |||||  |||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||||||    
T  22633822 tgtataaatagtagtttttctttggaaaaacaggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcac 22633921  T
Q  471 aagttgcaatgtatgaat 488  Q
    ||||||||| ||||||||    
T  22633922 aagttgcaaagtatgaat 22633939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 506
Target Start/End: Complemental strand, 23995765 - 23995665
Alignment:
Q  405 gtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttac 504  Q
    ||||||| || |||||||| ||||||||| ||||||||||| ||||  | ||||||||||||| ||||||  |||||||||||| ||||||| || ||||    
T  23995765 gtcacaattcaatcatacagaaaacttacactcaaactatctgcattta-gagagaaacgagtaacaagtcacaatgtatgaatctgtgtaccaatttac 23995667  T
Q  505 at 506  Q
    ||    
T  23995666 at 23995665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 23815420 - 23815319
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcc-tatcgaagttgga 174  Q
    |||||||||||||||||||| || ||||||| ||||  ||||||||||||||||||| | ||||||| |||  | ||||  ||||| |||||||||||||    
T  23815420 gtgttagccaatatttttaagggctatcattaaatgtagtcaaaataggttgaccttgtaatcgaaggaat--tattcttttttccttatcgaagttgga 23815323  T
Q  175 cttg 178  Q
    ||||    
T  23815322 cttg 23815319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 405 - 514
Target Start/End: Original strand, 20442245 - 20442353
Alignment:
Q  405 gtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttac 504  Q
    ||||||| || |||||||| |||||||||  |||||||||||||||   ||||| |||||||| ||||||  |||||||||||| | ||||| || ||||    
T  20442245 gtcacaattcaatcatacagaaaacttacaatcaaactatccgcat-tcagagataaacgagtaacaagtcacaatgtatgaatctctgtaccaatttac 20442343  T
Q  505 attcaatcaa 514  Q
    |||| |||||    
T  20442344 attcgatcaa 20442353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 34828048 - 34827975
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    ||||||||||||||| |||| | ||||||| ||||| ||||||||||||||||||| | ||||||  |||||||    
T  34828048 tgttagccaatatttctaaaagctatcattaaatgcagtcaaaataggttgaccttgtaatcgaatgaattgtt 34827975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 439
Target Start/End: Original strand, 24967522 - 24967594
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa 439  Q
    |||| |||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| |||||    
T  24967522 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaa 24967594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 374 - 508
Target Start/End: Complemental strand, 20281285 - 20281151
Alignment:
Q  374 gtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    ||||||||||||||||| |  ||||||||  |||||||| ||  ||||||| |||| |||| |||| |||||||||||  | ||||||||||||| ||||    
T  20281285 gtataaatagtagtttttcaaagaaaaaacaggtcacaattcagtcatacagaaaatttacactcatactatccgcattca-gagagaaacgagtaacaa 20281187  T
Q  473 gttgcaatgtatgaatatgtgtacaaacttacattc 508  Q
    ||   ||||||||| | ||||||| || ||||||||    
T  20281186 gtcagaatgtatgattctgtgtaccaatttacattc 20281151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 419 - 521
Target Start/End: Complemental strand, 25966277 - 25966176
Alignment:
Q  419 atacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacaca 518  Q
    ||||| |||| ||||||||||||||||| |||  | ||||||||||||| | ||||  ||||||||||||  |||||  || |||| |||||||||| ||    
T  25966277 atacagaaaatttacgctcaaactatccacattta-gagagaaacgagttaaaagtcacaatgtatgaatccgtgtatcaatttactttcaatcaacgca 25966179  T
Q  519 att 521  Q
    |||    
T  25966178 att 25966176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 340; Significance: 0; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 76 - 720
Target Start/End: Original strand, 7120 - 7762
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggac 175  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||| || ||||||||||||||||    
T  7120 gtgttagccaatatttttaaaggctatcatttaatgcagtcaaaataagttgaccttatcatcgaaaaaattgtcttctcatt-cctatcgaagttggac 7218  T
Q  176 ttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggata 275  Q
    ||| || | | ||||| ||||||||||| ||||||||||| ||||||||||||||||||||| || |  ||  | || |||||||| ||| |||   |||    
T  7219 ttgctggaga-tactcgaaagcgtgtgttttagttcgacaggcggaaagttatcgaaggacagttttgttgtggttttagataaggtcaagcaacatata 7317  T
Q  276 tttt-caagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttg 374  Q
    |||| |||||||||||||||||||||||||||||||||||| | |||||||||||  ||||||||||||| ||||||||||| |||||||||||||||||    
T  7318 tttttcaagacacattcgaaattcaaatcgaatggataagtatcgttagtttactatagttatagttttaaattcaaatctaggcagttatttctatttg 7417  T
Q  375 tataaatagtagttttcccta--gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    |||||||| ||| | ||||||  |||||||| ||||||| || |||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||    
T  7418 tataaataatagctctccctagggaaaaaagagtcacaattcaatcatacaaaaaacatacactcaaattatccgcatggaagagagaaacgagtcacaa 7517  T
Q  473 gttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttt 571  Q
    ||||||||||||||| |||||||  ||||||||||||||||| |||||| || |||||||  ||||||||||||||||||||||||| ||||||||||||    
T  7518 gttgcaatgtatgaacatgtgtatcaacttacattcaatcaatacaattaaagttcatttaattaaatgtctttacaatttacaatttacttgtttcttt 7617  T
Q  572 tgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttc 671  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||||| ||||||||||||| || ||   |||||||  |||||||||||| ||||||    
T  7618 tgagcaattcatttacctttatttacaccgatttcgattgggttcaactaggttgaattcgattgcatt---ttactttcctttatttatcaagttcttc 7714  T
Q  672 aagaataacattaaatttctggaagataacaagcacaaatatgtcctta 720  Q
    |||||||||| ||||||||||||| ||||||| ||| ||||||||||||    
T  7715 aagaataacactaaatttctggaaaataacaaacac-aatatgtcctta 7762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 339; Significance: 0; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 74 - 720
Target Start/End: Complemental strand, 43136016 - 43135373
Alignment:
Q  74 gtgtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttgg 173  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||| || || || ||||||||||||||    
T  43136016 gtgtgttagccaatatttttaa-ggttatcatttaatgcagtcaaaataggttgaccttatcattgaagaaattgtcttttcatt-cctatcgaagttgg 43135919  T
Q  174 acttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagttatcgaaggacaattcttgtgctga-ttcagataaggacaaacaatgg 272  Q
    ||||| |||| |  |||  ||||||||||| |  ||||||||  | |||||||||| |||| || || |||| |||| ||||||||||| ||| ||| ||    
T  43135918 acttgctgaagac-acttgaaagcgtgtgtttcggttcgacagacagaaagttatcaaagggcattt-ttgttctgaattcagataaggtcaagcaacgg 43135821  T
Q  273 atattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatt 372  Q
    ||||||||||||||| |||||||||||||| |||||||||||| | |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  43135820 atattttcaagacacgttcgaaattcaaattgaatggataagtatagttagtttactgcaattatagttttaaattcaaatctaggcagttatttctatt 43135721  T
Q  373 tgtataaatagtagttttccctag--aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcac 470  Q
    ||||||||||||||||||||||||  |||||| |||||||| || |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  43135720 tgtataaatagtagttttccctaggaaaaaaaaggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcac 43135621  T
Q  471 aagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttct 569  Q
    |||||| |||||||||| |||||||| || |||||||||||||| |||||| || |||||||| |||||||||||| |||| ||||||| ||||||||||    
T  43135620 aagttgtaatgtatgaacatgtgtaccaatttacattcaatcaatacaatttaagttcattttcttaaatgtctttgcaatatacaatttacttgtttct 43135521  T
Q  570 tttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaa-attc 668  Q
    ||||| |||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||||||   | ||| ||||||| ||||||||||||| ||||    
T  43135520 tttgaacaattcatttaccgttatttacaccgatttcgattgagttcaacagggttgaattcgat---tgttttttactttcttttatttatcaagattc 43135424  T
Q  669 ttcaagaataacattaaatttctggaagataacaagcacaaatatgtcctta 720  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  43135423 ttcaagaataacattaaatttctggaaaataacaaacac-aatatgtcctta 43135373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 77 - 709
Target Start/End: Complemental strand, 132875 - 132269
Alignment:
Q  77 tgttagccaatatttttaaaggt--tatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttgga 174  Q
    |||||||||||||||| ||| |   ||||||| ||||| || |||||||||||||||||| ||||||||||||||| |||| || | |||||||||||||    
T  132875 tgttagccaatattttcaaaagcgctatcattaaatgcagttaaaataggttgaccttataatcgaagaaattgttatctcatt-cttatcgaagttgga 132777  T
Q  175 cttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggat 274  Q
    |||| || | | ||||| |||||| ||||||  ||||||||   ||||| |  ||||||| ||||| ||    ||     ||||||| |||  ||  |||    
T  132776 cttgctggaga-tactcgaaagcgcgtgtgtcggttcgacaaatggaaactc-tcgaagggcaattttt----tg-----gataaggtcaagtaacagat 132688  T
Q  275 attttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttg 374  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| || | ||||||||||||||     
T  132687 atttccaagacacattcgaaattcaaatcgaatggataaatattgttagtttactgcagttatagatttaaattcaaatttaggtagttatttctattta 132588  T
Q  375 tataaatagtag-ttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    |||||||||||| ||||||||| |||||||||||||||| || |||||||||||||||||| | |||| |||  ||||| ||||||||||||||||||||    
T  132587 tataaatagtagcttttccctaggaaaaaagggtcacaattcaatcatacaaaaaacttacacgcaaattatttgcatggaagagagaaacgagtcacaa 132488  T
Q  473 gttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttt 571  Q
    ||||||||||||||| |||||||| || ||||||||||||||  ||||| || ||  |||| |||||||||||| ||||||       ||||||||||||    
T  132487 gttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgttttcttaaatgtctttgcaattt-------acttgtttcttt 132395  T
Q  572 tgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttc 671  Q
    ||||||||||||||||  ||||||||||      |||||| |||||||||||||||||| ||| |||||   ||||||| ||   |||||||| ||||||    
T  132394 tgagcaattcatttacttttatttacac-----acgattgagttcaactgggttgaatttgattgcttt---ttactttctt---tttatcaagttcttc 132306  T
Q  672 aagaataacattaaatttctggaagataacaagcacaa 709  Q
    ||||| |||||||||||||||||| ||||||| |||||    
T  132305 aagaacaacattaaatttctggaa-ataacaaacacaa 132269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 368 - 554
Target Start/End: Complemental strand, 12844711 - 12844523
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgag 466  Q
    |||||| |||||||||||||||| | |||  |||| ||||||||| || ||||||| ||||||||||||||||||| |||| ||| ||| ||  ||||||    
T  12844711 ctatttatataaatagtagtttttcttagggaaaatgggtcacaattcaatcatactaaaaacttacgctcaaactgtccgtatggaagcgactaacgag 12844612  T
Q  467 tcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    | ||||||||||||||||||| ||||  || |||||||||||||||||  |||||  ||| ||||| ||||||||||||| ||||||||    
T  12844611 ttacaagttgcaatgtatgaaaatgtacaccaacttacattcaatcaatgcaatttcaatacatttctttaaatgtctttgcaatttac 12844523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 371 - 514
Target Start/End: Original strand, 13023870 - 13024014
Alignment:
Q  371 tttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtca 469  Q
    |||||||||| ||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| |||||| | |||| ||| |||  |   ||||||||    
T  13023870 tttgtataaaaagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaaattgtccgtatggaagccactgacgagtca 13023969  T
Q  470 caagttgcaatgtatgaatatgtgtacaaacttacattcaatcaa 514  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  13023970 caagttgcaatgtatgaatatgtgtaccaacttacattcaatcaa 13024014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 371 - 634
Target Start/End: Complemental strand, 12021613 - 12021353
Alignment:
Q  371 tttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaaacta-tccgcatgaaagagagaaacgagtc 468  Q
    |||||||||||||||||||| | ||| |||||| |||||||| || ||||||| |||||||||| |||||| |  | || ||| ||| || |||| ||||    
T  12021613 tttgtataaatagtagtttttcttaggaaaaagaggtcacaattcaatcatactaaaaacttacactcaaaattgttcgtatggaagcgacaaacaagtc 12021514  T
Q  469 acaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgttt 567  Q
    ||||||||||||||||||||||||| || |||||||||||| |||   |||||  ||| ||||| ||||||||||||| ||||||       |||||||     
T  12021513 acaagttgcaatgtatgaatatgtgcaccaacttacattcagtcatggcaatttcaatacatttctttaaatgtctttgcaattt-------acttgttc 12021421  T
Q  568 cttttgagcaattcatttacggttatttaca-ccaatttcgattgggttcaactgggttgaattcgat 634  Q
     |||| || ||||| ||||| ||||||| || | || ||||||||| ||||||||| |||||||||||    
T  12021420 attttaagtaattcctttactgttatttgcatcaaacttcgattggattcaactggattgaattcgat 12021353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 7341602 - 7341461
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| |||||| |||||||| || ||||||| |||||||||||||||| ||| |||| ||| ||| || ||||||    
T  7341602 ctatctgtataaatagtagtttttcttaggaaaaaaaggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaacga 7341503  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||||||||||||||| ||||| ||||    
T  7341502 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 7341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 7396348 - 7396207
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| |||||| |||||||| || ||||||| |||||||||||||||| ||| |||| ||| ||| || ||||||    
T  7396348 ctatctgtataaatagtagtttttcttaggaaaaaaaggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaacga 7396249  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||||||||||||||| ||||| ||||    
T  7396248 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 7396207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 14683289 - 14683148
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  14683289 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 14683190  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||||||||||||||| ||||| ||||    
T  14683189 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 14683148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 368 - 493
Target Start/End: Original strand, 10139754 - 10139881
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  10139754 ctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 10139853  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| |||||||||||||    
T  10139854 gtcacaagttgcaaagtatgaatatgtg 10139881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 371 - 554
Target Start/End: Original strand, 12491913 - 12492099
Alignment:
Q  371 tttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtc 468  Q
    |||||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| || || | | |||| ||| ||| || |||||||||    
T  12491913 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactaaataatgtccgtatggaagcgacaaacgagtc 12492012  T
Q  469 acaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||||||||||||||| ||||| || |||||  ||||| ||||  |||||  ||| ||||| |||||| |||||| ||||||||    
T  12492013 acaagttgcaatgtatgaacatgtgcaccaacttttattcagtcaatgcaatttgaatacatttctttaaacgtctttgcaatttac 12492099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 368 - 493
Target Start/End: Original strand, 10171121 - 10171248
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||||||| |||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  10171121 ctatttgtgtaaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 10171220  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| |||||||||||||    
T  10171221 gtcacaagttgcaaagtatgaatatgtg 10171248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 368 - 507
Target Start/End: Original strand, 11887252 - 11887393
Alignment:
Q  368 ctatttgtataaatagtagttttccct-agaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| ||||||||||||||||||  || || |||||||||||||| || |||||||  ||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  11887252 ctatctgtataaatagtagttttttcttaggaaaaagggtcacaattcaatcatacttaaaacttacactcaatactgtccgtatggaagcgacaaacga 11887351  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||||||||||||||| ||||| ||||    
T  11887352 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 11887393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 13299605 - 13299464
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaaggg-tcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| |||||||| |||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||| ||    
T  13299605 ctatctgtataaatagtagtttttcttaggaaaaaggggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaatga 13299506  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| ||||||||||||| || ||||| ||||    
T  13299505 gtcacaagttgcaaagtatgaatatgtgcaccaactttcatt 13299464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 13310263 - 13310122
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaaggg-tcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| |||||||| |||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||| ||    
T  13310263 ctatctgtataaatagtagtttttcttaggaaaaaggggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaatga 13310164  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| ||||||||||||| || ||||| ||||    
T  13310163 gtcacaagttgcaaagtatgaatatgtgcaccaactttcatt 13310122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 368 - 502
Target Start/End: Original strand, 10778975 - 10779111
Alignment:
Q  368 ctatttgtataaatagtagttttccctaga-aaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| ||||||||||||||||||  ||  | |||||||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  10778975 ctatctgtataaatagtagttttttcttaagaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 10779074  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaactt 502  Q
    || ||||||||||| |||||||||||||||| |||||    
T  10779075 gttacaagttgcaaagtatgaatatgtgtaccaactt 10779111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 368 - 507
Target Start/End: Original strand, 10792493 - 10792634
Alignment:
Q  368 ctatttgtataaatagtagttttccctaga-aaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| ||||||||||||||||||  ||  | |||||||||||||| || ||||||| |||||||||| ||||| | | |||| ||| ||| || ||||||    
T  10792493 ctatctgtataaatagtagttttttcttaagaaaaagggtcacaattcaatcatactaaaaacttacactcaatagtgtccgtatggaagcgacaaacga 10792592  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||||||||||||||| ||||| ||||    
T  10792593 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 10792634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 328 - 554
Target Start/End: Original strand, 22444887 - 22445103
Alignment:
Q  328 ctgcagttatagttttagattcaaatctatgcagttatt-tctattt-gtataaatagtagt--tttccctag-aaaaaagggtcacaaatctatcatac 422  Q
    |||| |||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||| |  ||| | ||| ||||||||||||||| || ||||||     
T  22444887 ctgcggttatagttttaaattcaaatctaggcagttattctctattttgtataaatagtattatttttcttaggaaaaaagggtcacaattcaatcatat 22444986  T
Q  423 aaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattc 522  Q
     ||||||||||| |||||||||||| |                || |||||||||||||||||||| ||||||| |||||||||| | ||||  |||||     
T  22444987 taaaaacttacgttcaaactatccgta----------------gttacaagttgcaatgtatgaatttgtgtaccaacttacatttagtcaatccaattt 22445070  T
Q  523 aaattcattt-tttaaatgtctttacaatttac 554  Q
    || ||||||| ||||||||||||| ||||||||    
T  22445071 aagttcatttctttaaatgtctttgcaatttac 22445103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 396 - 514
Target Start/End: Original strand, 13101848 - 13101965
Alignment:
Q  396 gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgta 495  Q
    |||||| ||||||||  || | |||||| ||||| ||| ||||||||||||||||  | ||||||||||||| |||||| | ||||||| ||| ||||||    
T  13101848 gaaaaacgggtcacagttcaaccatacagaaaacatacactcaaactatccgcattta-gagagaaacgagttacaagtcgaaatgtataaatctgtgta 13101946  T
Q  496 caaacttacattcaatcaa 514  Q
    | || ||||||||||||||    
T  13101947 ccaatttacattcaatcaa 13101965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 374 - 511
Target Start/End: Original strand, 14133303 - 14133439
Alignment:
Q  374 gtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    ||||||||| ||||||| | || |||||| | ||||||| || |||||| ||||||||||  ||||||||||||||||  | ||||||||||||| ||||    
T  14133303 gtataaataatagtttttcataagaaaaacgagtcacaattcaatcata-aaaaaacttatactcaaactatccgcattca-gagagaaacgagtaacaa 14133400  T
Q  473 gttgcaatgtatgaatatgtgtacaaacttacattcaat 511  Q
    ||  |||||||||||| | ||||| ||  ||||||||||    
T  14133401 gtcacaatgtatgaatctatgtaccaatatacattcaat 14133439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 450
Target Start/End: Complemental strand, 55002498 - 55002422
Alignment:
Q  374 gtataaatagtagttttccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcat 450  Q
    |||||||||| |||||  |  ||||||| ||||||||| || |||||||||||||||||| | ||||||||||||||    
T  55002498 gtataaatagcagtttctcaaagaaaaacgggtcacaattcaatcatacaaaaaacttacacgcaaactatccgcat 55002422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 396 - 514
Target Start/End: Complemental strand, 14345686 - 14345569
Alignment:
Q  396 gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgta 495  Q
    |||||| ||||||||| || |  | ||| |||||||| ||||||||||||| |||  | ||||||||||||| | ||||   ||||||||||| ||||||    
T  14345686 gaaaaacgggtcacaattcaactacacagaaaacttatgctcaaactatccacattta-gagagaaacgagttataagtcaaaatgtatgaatttgtgta 14345588  T
Q  496 caaacttacattcaatcaa 514  Q
    | || ||||||||||||||    
T  14345587 ctaatttacattcaatcaa 14345569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 1934702 - 1934645
Alignment:
Q  454 agagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaat 511  Q
    |||||||||||||| ||||||  |||| ||||||| ||||||| ||||||||||||||    
T  1934702 agagagaaacgagtaacaagtcacaatatatgaatctgtgtaccaacttacattcaat 1934645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 22444638 - 22444692
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgacct 131  Q
    |||||||||||||||| || || ||||||||||| |||||||  |||||||||||    
T  22444638 tgttagccaatattttaaagggctatcatttaatacggtcaatgtaggttgacct 22444692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 297; Significance: 1e-166; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 295 - 720
Target Start/End: Original strand, 1658509 - 1658932
Alignment:
Q  295 attcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttccct 394  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||    ||||||||| ||||||||||| |    
T  1658509 attcaaatcgaatggataagtttcgttagtttactgcagttatagttttaaattcaaatctaggcagttattt----ttgtataaacagtagttttcctt 1658604  T
Q  395 ag--aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgt 492  Q
    ||  ||||||| ||||||| ||||||||||||||| ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1658605 agggaaaaaagtgtcacaattctatcatacaaaaa-cttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaatatgt 1658703  T
Q  493 gtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacggtt 591  Q
    |||| ||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||    
T  1658704 gtaccaacttacattcaatcaatacaattcaagttcatttctttaaatgtctttacaatttgcaatttacttgtttcttttgagcaattcatttacagtt 1658803  T
Q  592 atttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttcaagaataacattaaatttct 691  Q
    || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  1658804 atctacaccaatttcaattgggttcaactgggttgaattcgattgctttttcttactttattttatttatcaagttcttcaagaataacattcaatttct 1658903  T
Q  692 ggaagataacaagcacaaatatgtcctta 720  Q
    |||| ||||||||||||||||||||||||    
T  1658904 ggaaaataacaagcacaaatatgtcctta 1658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 264 - 703
Target Start/End: Complemental strand, 18567250 - 18566816
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| |||||| |||| |||||| ||||||||||| ||| ||    
T  18567250 aaacaacggatattttcaagacgcattcgaaattcaaattgaatggataagtttcgttagtt-actgcaattattgttttaaattcaaatctaggcaatt 18567152  T
Q  364 atttctatttgtataaatagtagttttccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaac 463  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||| || ||||||| |||||||||||    
T  18567151 atttctatttgtataaatagtagttttccctagaaaaaaaggtcacaattctatcatacaaaaa-cttacactcaaattacccgcatggaagagagaaac 18567053  T
Q  464 gagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcact 562  Q
    |||||||||||||||||| |||||||||||||| || |||||||||| ||| ||| || || |||||||| |||||||||||| |||||||||||| |||    
T  18567052 gagtcacaagttgcaatgaatgaatatgtgtaccaatttacattcaaacaatacactttaagttcattttcttaaatgtctttgcaatttacaatttact 18566953  T
Q  563 tgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatc 662  Q
    |||||||||| |||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||| |||||    || ||| |||||||||||    
T  18566952 tgtttctttttagcaattcatttacagttatttacacaaattttgactgggttcaactgggttgaattcgattgcttt---ctattttcttttatttatc 18566856  T
Q  663 aaattcttcaagaataacattaaatttctggaagataacaa 703  Q
    |  |||||||| || || ||||||||||||||| |||||||    
T  18566855 acgttcttcaa-aacaatattaaatttctggaaaataacaa 18566816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 275 - 643
Target Start/End: Original strand, 10267123 - 10267491
Alignment:
Q  275 attttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttg 374  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||| ||| ||||||    
T  10267123 attttcaagacacattcagaattcaaatcgaatggataagttttgttagtt-actgcagttatagttttaaattcgaatctaggcagttgtttttatttg 10267221  T
Q  375 tataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaag 473  Q
    |||||||||||||||||||||   ||||| ||||| || || |||||||||||| ||||| |||||| |||||||||| ||||||||||||| |||||||    
T  10267222 tataaatagtagttttccctaaggaaaagtggtcaaaattcaatcatacaaaaa-cttacactcaaattatccgcatggaagagagaaacgaatcacaag 10267320  T
Q  474 ttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttctttt 572  Q
    |||||||||||||| |||||||| || ||||||||||||||  || || || |||||||| |||||||||||| |||||||||||| |||||||||||||    
T  10267321 ttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcactttaagttcattttcttaaatgtctttgcaatttacaatttacttgtttctttt 10267420  T
Q  573 gagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttc 643  Q
     |||||| ||||| | |||||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||    
T  10267421 tagcaatacatttgcagttatttacaccgatttcgattgggttcaattgggttgaattcgattgctctttc 10267491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 276 - 700
Target Start/End: Complemental strand, 31079998 - 31079581
Alignment:
Q  276 ttttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagtttt-agattcaaatctatgcagttatttctatttg 374  Q
    |||| |||||||||||||||||||||  ||||||||||||| |||| ||| ||||||||||||||||| | ||| ||   || |||||||||||||||||    
T  31079998 tttttaagacacattcgaaattcaaactgaatggataagttctgttggtt-actgcagttatagtttttaaatttaagcttaggcagttatttctatttg 31079900  T
Q  375 tataaatagtagttttcccta---gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcaca 471  Q
    ||||||||||||||| | | |   |||||| ||||||||| || |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  31079899 tataaatagtagtttcctccaaaggaaaaaggggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcaca 31079800  T
Q  472 agttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattca--ttttttaaatgtctttacaatttacaattcacttgtttct 569  Q
    | ||||||||| |||| |||||||| ||  || |||| |||||  ||||| || ||||  ||||||||||||||||| |  ||        |||||||||    
T  31079799 aattgcaatgtgtgaacatgtgtaccaatctatattcgatcaatgcaatttaagttcattttttttaaatgtctttagagctt-------tcttgtttct 31079707  T
Q  570 tttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattct 669  Q
    ||||||| ||||||||||  || |||| |||  |||||||||| ||  ||||||||||||||||| ||||||||||||||  |    |||| ||| ||||    
T  31079706 tttgagc-attcatttacttttgtttataccggtttcgattggatttgactgggttgaattcgattgctttttcttacttcgt----tttaccaagttct 31079612  T
Q  670 tcaagaataacattaaatttctggaagataa 700  Q
    |||||||||| ||||||||||  ||||||||    
T  31079611 tcaagaataatattaaatttccagaagataa 31079581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 292 - 634
Target Start/End: Complemental strand, 3078158 - 3077825
Alignment:
Q  292 gaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttc 391  Q
    ||||||||||||  |||  |||| || |||||||| || | |||||||||||    ||||||||| ||||||||| |||||||||||||||||||||||     
T  3078158 gaaattcaaatcatatgactaagattagttagttttctacggttatagtttt----tcaaatctaggcagttattcctatttgtataaatagtagttttt 3078063  T
Q  392 cctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatat 490  Q
    | |||||||||  |||||||| || |||||||||||| |||| ||||||| |||||| ||| |||  ||||||||| ||||||||| ||||||||||| |    
T  3078062 cttagaaaaaaaaggtcacaattcaatcatacaaaaa-cttaagctcaaattatccgtatggaagcaagaaacgagccacaagttgtaatgtatgaatct 3077964  T
Q  491 gtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacgg 589  Q
    |||||| |||||||||||||||||  ||||| || ||||||| ||||||||||||| ||||||       ||||||||||||| ||  ||||||||||      
T  3077963 gtgtaccaacttacattcaatcaatgcaatttaagttcatttctttaaatgtctttgcaattt-------acttgtttcttttaagtgattcatttactt 3077871  T
Q  590 ttatttacacca-atttcgattgggttcaactgggttgaattcgat 634  Q
    ||| || || || | ||||||||| |||||||||||||||||||||    
T  3077870 ttaattgcatcatacttcgattggattcaactgggttgaattcgat 3077825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 360 - 554
Target Start/End: Complemental strand, 49526616 - 49526418
Alignment:
Q  360 agttatttctatttgtataaatagtagttttcccta--gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatg-aaaga 456  Q
    |||| ||||||||  |||||||||||||||| |||   | ||||||||| ||||  | |||||||| |||||||||  |||||||||||||||  |||||    
T  49526616 agttttttctattaatataaatagtagtttttccttagggaaaaagggtgacaatccaatcatacacaaaacttacaatcaaactatccgcattcaaaga 49526517  T
Q  457 gagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttac 554  Q
    ||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||  ||||| || ||  |||| |||| ||||||| ||||||||    
T  49526516 gagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttgttttcttaattgtctttgcaatttac 49526418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 794 - 888
Target Start/End: Original strand, 53304997 - 53305091
Alignment:
Q  794 ggaagaggtgtggtgctgacattgggaggatggtggtggtggggaggacgacggcgggagatctggaggacagtgagacttcagagagatggaga 888  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||    
T  53304997 ggaagaggtgtggtgctgacagtgggaggttggtggtggtggggaggccaacggtgggagatctggaggacagtgagagttcagagagatggaga 53305091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 371 - 634
Target Start/End: Complemental strand, 14022567 - 14022308
Alignment:
Q  371 tttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtca 469  Q
    ||||||||||||||||||||   ||| ||||||||||||||| || ||||||| |||||||||| |||||| | |||| ||  |||  |   ||||||||    
T  14022567 tttgtataaatagtagttttttttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaaattgtccgtatagaagcaactgacgagtca 14022468  T
Q  470 caagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttc 568  Q
    ||||||||||||||||||||||||||| |||||||||||||||||  |||||  ||| ||||| ||||| | || || ||||||       ||||||||     
T  14022467 caagttgcaatgtatgaatatgtgtactaacttacattcaatcaatgcaatttcaatacatttctttaagtatcattgcaattt-------acttgttta 14022375  T
Q  569 ttttgagcaattcatttacggttatttacacca-atttcgattgggttcaactgggttgaattcgat 634  Q
    ||||||| |||||||||||  ||| || ||||| | ||| ||||| ||||||||||||| |||||||    
T  14022374 ttttgagtaattcatttacttttacttgcaccatacttcaattggattcaactgggttggattcgat 14022308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 368 - 507
Target Start/End: Original strand, 18108683 - 18108824
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  18108683 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 18108782  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||||||||||||||| ||||| ||||    
T  18108783 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 18108824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 396 - 511
Target Start/End: Original strand, 50687558 - 50687673
Alignment:
Q  396 gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgta 495  Q
    |||||| |||||||||| | |||||||| ||||||||| ||||  ||||||||||  |||||| ||||||||||||||||  |||||||||| |||||||    
T  50687558 gaaaaacgggtcacaaaccaatcatacacaaaacttacactcaggctatccgcattcaagagacaaacgagtcacaagttataatgtatgaacatgtgta 50687657  T
Q  496 caaacttacattcaat 511  Q
    | || |||||||||||    
T  50687658 ccaatttacattcaat 50687673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 15153759 - 15153618
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | |||||||||  |||||||| || ||||||| ||||| |||| ||||| ||| |||| ||| ||| || ||||||    
T  15153759 ctatttgtataaatagtagtttttcttagaaaaaacaggtcacaattcgatcatactaaaaaattacactcaatactgtccgtatggaagcgacaaacga 15153660  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| |||||||| |||| || ||||| ||||    
T  15153659 gtcacaagttgcaaagtatgaatctgtgcaccaactttcatt 15153618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 14557071 - 14556944
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | |||||||||  |||||||| || ||||||| ||||| |||| ||||| ||| |||| ||| ||| || ||||||    
T  14557071 ctatttgtataaatagtagtttttcttagaaaaaacaggtcacaattcaatcatactaaaaaattacactcaatactgtccgtatggaagcgacaaacga 14556972  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| |||||||| ||||    
T  14556971 gtcacaagttgcaaagtatgaatctgtg 14556944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 369 - 493
Target Start/End: Complemental strand, 13277361 - 13277235
Alignment:
Q  369 tatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    |||||||||||||||||||||| | ||| |||||  |||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||    
T  13277361 tatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 13277262  T
Q  467 tcacaagttgcaatgtatgaatatgtg 493  Q
    |||| |||||||| |||||||||||||    
T  13277261 tcacgagttgcaaagtatgaatatgtg 13277235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 369 - 493
Target Start/End: Complemental strand, 13292739 - 13292613
Alignment:
Q  369 tatttgtataaatagtagttttccctagaaaaaagg-gtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    |||||||||||||||||||||| | ||| |||||   ||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||    
T  13292739 tatttgtataaatagtagtttttcttaggaaaaacatgtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 13292640  T
Q  467 tcacaagttgcaatgtatgaatatgtg 493  Q
    |||| |||||||| |||||||||||||    
T  13292639 tcacgagttgcaaagtatgaatatgtg 13292613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 377 - 493
Target Start/End: Complemental strand, 14714278 - 14714160
Alignment:
Q  377 taaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcacaagt 474  Q
    |||||||||||||| | ||| ||||| ||||||||| || ||||||| ||||| |||| || || ||| |||| ||| ||| || |||||||||||||||    
T  14714278 taaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaatttacacttaatactgtccgtatggaagcgacaaacgagtcacaagt 14714179  T
Q  475 tgcaatgtatgaatatgtg 493  Q
    ||||| |||||||||||||    
T  14714178 tgcaaagtatgaatatgtg 14714160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 377 - 493
Target Start/End: Complemental strand, 14775958 - 14775840
Alignment:
Q  377 taaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcacaagt 474  Q
    |||||||||||||| | ||| ||||| ||||||||| || ||||||| ||||| |||| || || ||| |||| ||| ||| || |||||||||||||||    
T  14775958 taaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaatttacacttaatactgtccgtatggaagcgacaaacgagtcacaagt 14775859  T
Q  475 tgcaatgtatgaatatgtg 493  Q
    ||||| |||||||||||||    
T  14775858 tgcaaagtatgaatatgtg 14775840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 18567430 - 18567357
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    |||||| ||||||||||||||| ||||||| ||||| |||||| |||||||||||| | ||||||| |||||||    
T  18567430 tgttagtcaatatttttaaaggctatcattaaatgcagtcaaagtaggttgaccttgtaatcgaaggaattgtt 18567357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 460 - 511
Target Start/End: Complemental strand, 27812364 - 27812313
Alignment:
Q  460 aaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaat 511  Q
    |||| |||||||||||||||||||||||||||| ||| || |||||||||||    
T  27812364 aaacaagtcacaagttgcaatgtatgaatatgtctaccaatttacattcaat 27812313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 75 - 720
Target Start/End: Original strand, 3411 - 4029
Alignment:
Q  75 tgtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttgga 174  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||| ||||||||||||||||  | ||||||||| || ||    
T  3411 tgtgttagccaatatttttaaaggttatcatttaatatagtcaaaataggttgacctaatcatcaaagaaattgttttctcact-cctatcgaacttaga 3509  T
Q  175 cttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggat 274  Q
    |||| |||||| ||||| ||||||||||| ||||||||||| | |||||||||||||||||||||| ||||  |||||||||||                    
T  3510 cttgctgaaaa-tactcgaaagcgtgtgttttagttcgacaggtggaaagttatcgaaggacaatttttgttgtgattcagata---------------- 3592  T
Q  275 attttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttg 374  Q
     |||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  3593 -ttttcaagacacattcgaaattcaaatcaaatggataagtgtcgttagtttactgcagttatagtttttaattcaaatctaggcagttatttctatttg 3691  T
Q  375 tataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaag 473  Q
    ||||| ||||||||||||||| | |||| ||||||||| ||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  3692 tataagtagtagttttccctagggaaaatgggtcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaag 3791  T
Q  474 ttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttc-ttt 571  Q
    ||| |||||||||| ||||| || || ||| |||||||||| | ||||||| |||||||  |||||  ||       ||||||||||||||||||| |||    
T  3792 ttgaaatgtatgaacatgtg-accaatttatattcaatcaatataattcaagttcatttccttaaacatc-------tttacaattcacttgtttctttt 3883  T
Q  572 tgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttc 671  Q
    ||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||||| || |||  ||||||||||||||||||||| ||||||    
T  3884 tgagcaattcatttacctttatttacaccgatttcgattggattcaactgggttgaattcgattgccttt--ttactttattttatttatcaagttcttc 3981  T
Q  672 aagaataacattaaatttctggaagataacaagcacaaatatgtcctta 720  Q
    ||||||||| |||||||| ||||| ||| ||| ||| ||||||||||||    
T  3982 aagaataacgttaaatttttggaaaatagcaaacac-aatatgtcctta 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 287; Significance: 1e-160; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 77 - 642
Target Start/End: Original strand, 12025 - 12583
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggact 176  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||    
T  12025 tgttagccaatatttttaaaggttattatttaatgcagtcaaaataggttgaccttgtcattgaagaaattgttttct-ctttcctatcgaagttggact 12123  T
Q  177 tgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcg-gaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggata 275  Q
    || || ||||| ||| |||||| |||| |||||||||   |||  |||||||||||||| || || ||||  || ||| ||||||||||| ||| | |||    
T  12124 tgttg-aaaatgctcgaaagcgcgtgttttagttcgatgggcgaaaaagttatcgaagggcagtt-ttgttgtggttcggataaggacaagcaacgaata 12221  T
Q  276 ttttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgt 375  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| | |||||||||||||| |    
T  12222 ttttcaagacacattcgaaattcaaatcgaatggataagtattgttagtttattgcagttatagttttaaattcaaatctaggtagttatttctatttat 12321  T
Q  376 ataaatagtag-ttttccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagt 474  Q
    ||||||||||| |||||| ||| ||||  ||||||||||| |||||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||    
T  12322 ataaatagtagtttttccttaggaaaagaggtcacaaatcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacaagtcacaagt 12421  T
Q  475 tgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttg 573  Q
    ||||||||||||| |||||||| || || ||||||| |||  ||||| || |||||||| |||||||||||||||||||       ||||||||||||||    
T  12422 tgcaatgtatgaacatgtgtaccaatttgcattcaaccaatgcaatttaagttcattttcttaaatgtctttacaattt-------acttgtttcttttg 12514  T
Q  574 agcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagcttttt 642  Q
    ||||||||||||||  ||||||||||| ||||| ||||||||||||||||||||||| ||| |||||||    
T  12515 agcaattcatttacctttatttacaccgatttcaattgggttcaactgggttgaatttgattgcttttt 12583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 286; Significance: 1e-160; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 264 - 703
Target Start/End: Complemental strand, 14389 - 13950
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||    
T  14389 aaacaacggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtt-actgcagttatagttttaaattcgaatctaggcagtt 14291  T
Q  364 atttctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaa 462  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||| || |||||||||||| ||||| |||||| |||||||||| ||||||||||    
T  14290 atttctagttgtataaatagtagttttccctaaggaaaaagggtcacaattcaatcatacaaaaa-cttacactcaaattatccgcatggaagagagaaa 14192  T
Q  463 cgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcac 561  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||   | || || |||||||| |||||||||||| |||||||||||| ||    
T  14191 cgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatttattttaagttcattttcttaaatgtctttgcaatttacaatttac 14092  T
Q  562 ttgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttat 661  Q
    |||||||||||||||| ||||||||| |||||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  14091 ttgtttcttttgagcagttcatttacagttatttacatcgatttcgattgggttcaactgggttaaattcgattgctttttcttactttattttatttat 13992  T
Q  662 caaattcttcaagaataacattaaatttctggaagataacaa 703  Q
    ||| |||||||||||||| ||||||||||||||| |||||||    
T  13991 caagttcttcaagaataatattaaatttctggaaaataacaa 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 14569 - 14496
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||| ||||||||| | ||| ||| |||||||    
T  14569 tgttagccaatatttttaaaggctatcattaaatgcagtcaaaataagttgaccttgtaatcaaaggaattgtt 14496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 269; Significance: 1e-150; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 75 - 720
Target Start/End: Original strand, 11793802 - 11794446
Alignment:
Q  75 tgtgttagccaatattttta-aaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttgg 173  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||||    
T  11793802 tgtgttagccaatatttttttaaggttatcatttaatgcagtcaaaataggttgaccttatcatcgaagaaattgtcttctcgtttc-tattgaagttgg 11793900  T
Q  174 acttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatgga 273  Q
    | | | || | | ||||| ||  ||||||| | ||||||| |  | ||| ||||||||||| |  || |  ||  ||| || ||| || ||| ||| |||    
T  11793901 attcgctggaga-tactcgaatacgtgtgtttcagttcgagagacagaaggttatcgaagggcggttttgttggggat-caaatagggtcaagcaacgga 11793998  T
Q  274 tattttcaagacacattcgaaattcaaatcgaatggataagttttgttagttt-actgcagttatagttttagattcaaatctatgcagttatttctatt 372  Q
    |||||||||||||||||||||||| ||||||||||||||| | | |||||||| | |||||||||||||||| |||||||| || ||||||||||||||     
T  11793999 tattttcaagacacattcgaaatttaaatcgaatggataaatgtagttagttttattgcagttatagttttaaattcaaatgtaggcagttatttctata 11794098  T
Q  373 tgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcaca 471  Q
    |||||||||||||||||||| ||| ||||||||||||||| || || |||||||||| |||| |||||| |||||||||| |||| | |||||| |||||    
T  11794099 tgtataaatagtagttttccataggaaaaaagggtcacaattcaattatacaaaaaatttacactcaaattatccgcatggaagatataaacgaatcaca 11794198  T
Q  472 agttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttctt 570  Q
    |||||||||||||||| |||||||| ||||||||||||||||| |||||| || |||||||| |||||||||| | |||||||||||| |||||| ||||    
T  11794199 agttgcaatgtatgaacatgtgtaccaacttacattcaatcaatacaatttaagttcattttcttaaatgtctctgcaatttacaattgacttgtctctt 11794298  T
Q  571 ttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattctt 670  Q
    |||||||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||||| |||||   ||| ||| ||||||||||||| ||||     
T  11794299 ttgagcaattcatttacctttatttacaccgatttcgattgggttaaactgggttgaattcgattgcttt---ttaatttcttttatttatcaagttctc 11794395  T
Q  671 caagaataacattaaatttctggaagataac-aagcacaaatatgtcctta 720  Q
    |||||| ||||| |||||||||||| ||||| || |||||||| |||||||    
T  11794396 caagaacaacatcaaatttctggaaaataacaaaacacaaataagtcctta 11794446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 128 - 709
Target Start/End: Complemental strand, 18258488 - 18257908
Alignment:
Q  128 accttatcatcgaagaaattgttttctcctttcctatcgaagttggacttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagtta 227  Q
    ||||||||||||||||| |||| ||||| || ||||||||||||||||||| || | | ||||| |||||| |||| |  ||||||||  | ||||||||    
T  18258488 accttatcatcgaagaagttgtcttctcatt-cctatcgaagttggacttgttggaga-tactcgaaagcgcgtgtttcggttcgacagacagaaagtta 18258391  T
Q  228 tcgaaggacaattcttgtgctg-attcagataaggacaaa-caatggatatttt-caagacacattcgaaattcaaatcgaatggataagttttgttagt 324  Q
    || |||| || || ||||  || ||| |||||||| |||| ||| || |||||| |||||||||||||||||||||||||||||||||||| | ||||||    
T  18258390 tcaaagggcagtt-ttgttatggatttagataaggtcaaagcaacgggtatttttcaagacacattcgaaattcaaatcgaatggataagtatagttagt 18258292  T
Q  325 ttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcataca 423  Q
     || |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||  | |||||    
T  18258291 atattgcagttatagttttaaattcaaatctaggcagttatttctatttgtataaatagtagttttccttagaaaaaaagggtcacaattcattaataca 18258192  T
Q  424 aaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattca 523  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||| |||||| |    
T  18258191 aaaaagttacactcaaattatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtatcaatttacattcaatcaatacaattta 18258092  T
Q  524 aattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgg 622  Q
    | |||||||| |||||||| ||| |||| ||||||| | ||||||||||||| |||||||||||| || ||||||||| ||||||||| |||||||| ||    
T  18258091 agttcattttcttaaatgtttttgcaatctacaatttatttgtttcttttgaacaattcatttaccgtcatttacaccgatttcgatt-ggttcaaccgg 18257993  T
Q  623 gttgaattcgatagctttttcttactttattttatttatcaa-attcttcaagaataacattaaatttctggaagataacaagcacaa 709  Q
    ||||||||| ||   || || ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  18257992 gttgaattcaat---ttctttttactttcttttatttatcaagattcttcaagaataacattaaatttctggaaaataacaaacacaa 18257908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 271 - 720
Target Start/End: Complemental strand, 16597486 - 16597047
Alignment:
Q  271 ggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttcta 370  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| ||||||||||| | |||||||||||    
T  16597486 ggatatttgcaaggcacattcgaaattcaaatcaaatggataagtgttgttagtttactacagttatagttttaaattcaaatctaggtagttatttcta 16597387  T
Q  371 tttgtataaatagtagttttccct-agaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtca 469  Q
    ||||||||  |||||||||| ||| || ||||  ||| ||||  | |||||| ||||||||||| |||||| |||||||||| |||| |||||||||| |    
T  16597386 tttgtatacgtagtagtttttcctaaggaaaacaggtgacaatccaatcatataaaaaacttacactcaaattatccgcatggaagaaagaaacgagtga 16597287  T
Q  470 caagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttc 568  Q
    |||||||||||||||||| |||||||| || ||||||||||||||  ||||| || |||||||| |||||||||||||||||||       |||||||||    
T  16597286 caagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagttcattttcttaaatgtctttacaattt-------acttgtttc 16597194  T
Q  569 ttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattc 668  Q
    |||| || ||| |||||||  || ||||| |||||||||||||| ||||||| ||||||||||||| |||||   ||| ||| ||||||||||||| |||    
T  16597193 ttttaagtaatacatttacttttttttactccaatttcgattggattcaact-ggttgaattcgattgcttt---ttaatttcttttatttatcaagttc 16597098  T
Q  669 ttcaagaataacattaaatttctggaagataacaagcacaaatatgtcctta 720  Q
    ||||| ||||||||||||||||| ||| ||||||| ||| ||||||||||||    
T  16597097 ttcaataataacattaaatttctagaaaataacaaacac-aatatgtcctta 16597047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 288 - 585
Target Start/End: Complemental strand, 26460809 - 26460517
Alignment:
Q  288 attcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagt 387  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||| |||||| | |||||||| || | ||||||||||||| ||||||||||||||    
T  26460809 attcgaaattcaaatcgaatggataagtattgttagtttatagcagttgtagtttcaaattcaaatataggtagttatttctattagtataaatagtagt 26460710  T
Q  388 tt-tccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatga 486  Q
    || || | ||  |||  ||||||||  | |||||||| ||||||||| |||||| |||||||||| |||||| |||||||||||||||||||||||||||    
T  26460709 ttctcgcaagggaaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcatggaagagataaacgagtcacaagttgcaatgtatga 26460610  T
Q  487 atatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcattt 585  Q
    | |||||||| || ||||||||||||||  ||||| || |||||||| |||||||||||||||||||       ||||||||||||||||||||||||||    
T  26460609 acatgtgtaccaatttacattcaatcaatgcaatttaagttcattttcttaaatgtctttacaattt-------acttgtttcttttgagcaattcattt 26460517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 319 - 554
Target Start/End: Complemental strand, 19272503 - 19272267
Alignment:
Q  319 gttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttt-tccctagaaaaaagggtcacaaatctat 417  Q
    |||||||||  |||||| |||||||| |||||||  || | |||||| |||||| |||||||||||||||| || | ||| |||| ||||||||  | ||    
T  19272503 gttagtttatagcagttgtagttttaaattcaaacataggtagttatgtctattagtataaatagtagtttctcgcaagagaaaacggtcacaatccaat 19272404  T
Q  418 catacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacac 517  Q
    |||||| ||||||||| |||||| |||| ||||| ||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||  |    
T  19272403 catacacaaaacttacactcaaattatctgcatggaagagagaaacgagtcacaagttgc-atgtatgaacatgtgtaccaatttacattcaatcaatgc 19272305  T
Q  518 aattcaaattcatttt-ttaaatgtctttacaatttac 554  Q
    |||| || || ||||| ||||| |||||||||||||||    
T  19272304 aatttaagtttattttcttaaacgtctttacaatttac 19272267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 369 - 501
Target Start/End: Original strand, 23496542 - 23496676
Alignment:
Q  369 tatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    |||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| |||||||| ||| ||| || |||||||    
T  23496542 tatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactatccgtatggaagcgacaaacgag 23496641  T
Q  467 tcacaagttgcaatgtatgaatatgtgtacaaact 501  Q
    ||||||||||||| |||||||||||||||| ||||    
T  23496642 tcacaagttgcaaagtatgaatatgtgtaccaact 23496676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 369 - 501
Target Start/End: Original strand, 23490944 - 23491078
Alignment:
Q  369 tatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    |||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||    
T  23490944 tatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactttccgtatggaagcgacaaacgag 23491043  T
Q  467 tcacaagttgcaatgtatgaatatgtgtacaaact 501  Q
    ||||||||||||| |||||||||||||||| ||||    
T  23491044 tcacaagttgcaaagtatgaatatgtgtaccaact 23491078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 19405926 - 19405785
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  19405926 ctatttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 19405827  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| ||||||| ||||| || ||||| ||||    
T  19405826 gtcacaagttgcaaagtatgaacatgtgcaccaactttcatt 19405785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 369 - 507
Target Start/End: Original strand, 23431904 - 23432044
Alignment:
Q  369 tatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    |||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| | | | || ||| ||| || |||||||    
T  23431904 tatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatattgttcgtatggaagcgacaaacgag 23432003  T
Q  467 tcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||||||| |||||||||||||||| ||||| ||||    
T  23432004 tcacaagttgcaaagtatgaatatgtgtaccaactttcatt 23432044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 369 - 493
Target Start/End: Complemental strand, 19025529 - 19025403
Alignment:
Q  369 tatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    ||||||||||||||| |||||| | || |||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||    
T  19025529 tatttgtataaatagaagtttttcttaagaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 19025430  T
Q  467 tcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||| |||||||||||||    
T  19025429 tcacaagttgcaaagtatgaatatgtg 19025403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Original strand, 16209785 - 16209913
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||  || ||||||| |||||||||| ||||| ||| |||  ||| ||| || |||||    
T  16209785 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacagttcaatcatactaaaaacttacactcaatactgtccatatggaagcgacaaacg 16209884  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  16209885 agtcacaagttgcaaagtatgaatatgtg 16209913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 30755670 - 30755542
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||| || |||||||  ||||||||| ||||| | | |||| ||| ||| || |||||    
T  30755670 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttacactcaatattgtccgtatggaagcgacaaacg 30755571  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  30755570 agtcacaagttgcaaagtatgaatatgtg 30755542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 369 - 493
Target Start/End: Complemental strand, 19038572 - 19038446
Alignment:
Q  369 tatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    ||||||||||||||| |||||| | || |||||| ||||||||| || ||||||| |||||||||| ||||| | | |||| ||| ||| || |||||||    
T  19038572 tatttgtataaatagaagtttttcttaagaaaaacgggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaagcgacaaacgag 19038473  T
Q  467 tcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||| |||||||||||||    
T  19038472 tcacaagttgcaaagtatgaatatgtg 19038446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 367 - 496
Target Start/End: Complemental strand, 1557824 - 1557693
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||| |||||||||||||||||| | ||| |||||| |||||||| || |||||||  ||||||||| ||||| | | |||| ||| ||| || |||||    
T  1557824 tctatctgtataaatagtagtttttcttaggaaaaagaggtcacaattcaatcatactcaaaacttacactcaatattgtccgtatggaagcgacaaacg 1557725  T
Q  465 agtcacaagttgcaatgtatgaatatgtgtac 496  Q
    ||||||||||||||| ||||||| ||||||||    
T  1557724 agtcacaagttgcaaagtatgaacatgtgtac 1557693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 416 - 507
Target Start/End: Complemental strand, 16310194 - 16310102
Alignment:
Q  416 atcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||| ||||||||||| |||||||||||||||| ||||| ||||    
T  16310194 atcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaatatgtgtaccaactttcatt 16310102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 16597682 - 16597641
Alignment:
Q  78 gttagccaatatttttaaaggttatcatttaatgcggtcaaa 119  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||    
T  16597682 gttagccaatatttttaaaggctatcattaaatgcagtcaaa 16597641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 620 - 720
Target Start/End: Complemental strand, 19272207 - 19272115
Alignment:
Q  620 tgggttgaattcgatagctttttcttactttattttatttatcaaattcttcaagaataacattaaatttctggaagataacaagcacaaatatgtcctt 719  Q
    ||||||||||||||| |||||||   ||||| ||||||    ||| ||||||||||| || | ||||||||||||| ||||||| ||| |||||||||||    
T  19272207 tgggttgaattcgattgcttttt---actttcttttat----caagttcttcaagaacaatactaaatttctggaaaataacaaacac-aatatgtcctt 19272116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 264 - 703
Target Start/End: Original strand, 10624191 - 10624636
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||| || ||||||    
T  10624191 aaacaacggatattttcaagacacattcgaaattcaaatcgaatggataagtttcgttagtt-actgcagttatagttttaaattcaaatataggcagtt 10624289  T
Q  364 atttctatttgtataaat----agtagttttccctag--aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagag 457  Q
    ||||||||||||||||||    ||||||||| |||||  ||||||||||||||| ||||||||||||||| ||||| |||||| |||||||||| |||||    
T  10624290 atttctatttgtataaattaatagtagtttttcctagggaaaaaagggtcacaattctatcatacaaaaa-cttacactcaaattatccgcatggaagag 10624388  T
Q  458 agaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttttt--aaatgtctttacaatttaca 555  Q
    | ||| |||||||||||||||||||||||| |||||||| || ||||||||||| || ||| || || |||||||| |  |||||||||| |||||||||    
T  10624389 ataaatgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaataaatacactttaagttcattttcttaaaatgtctttgcaatttaca 10624488  T
Q  556 attcacttgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttatttt 655  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  10624489 atttacttgtttcttttgagcaattcatttacagttatttacaccgatttcgattgggttcaaatgggttgaattcaattgctttttcttactttatttt 10624588  T
Q  656 atttatcaaattcttcaagaataacattaaatttctggaagataacaa 703  Q
    ||||||||| |||||||||||||| ||||| ||| ||||| |||||||    
T  10624589 atttatcaagttcttcaagaataatattaagtttttggaaaataacaa 10624636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 80 - 558
Target Start/End: Original strand, 40932585 - 40933064
Alignment:
Q  80 tagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggacttga 179  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||||| |||||||||| |||||||| | | ||| ||||||| |||||||||     
T  40932585 tagccaatatttttaaaagttatcatttaatgcagtcaaaataggtcgaccttgtcatcgaagagattgtttttttcattcatatcgaaattggacttgc 40932684  T
Q  180 tgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggatatttt 279  Q
    |||||| | ||  |||||| |||  ||||| ||||| ||| |||||||||||| |||| || ||||  || ||| ||||||| |||  ||  ||||||||    
T  40932685 tgaaaa-tgcttgaaagcgcgtgatttagtccgacaggcgaaaagttatcgaatgacagtttttgttgtggttcggataaggtcaagtaacagatatttt 40932783  T
Q  280 caagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataa 379  Q
    | |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||||    
T  40932784 ccagacacattcgaaattcaaatcgaatggataagtatcgttagtttactgtagttatagttttagattcaaatctagacagttatttcaatttgtataa 40932883  T
Q  380 atagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgca 478  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||| || |||||| |||| ||||| |||||| |||||||||||||||||||    
T  40932884 atagtagttttccctagggaaaaagggtcacaattctatcatacaaaaaactaacactcaaattatctgcatggaagagataaacgagtcacaagttgca 40932983  T
Q  479 atgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaatt 558  Q
    |||||||||||||||||| || |||||||||||||| |||||| || |||||||  |||||||||||| ||||||| ||||    
T  40932984 atgtatgaatatgtgtaccaatttacattcaatcaatacaatttaagttcatttccttaaatgtctttgcaatttataatt 40933064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 264 - 720
Target Start/End: Original strand, 18156033 - 18156479
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaa-tcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagt 362  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||| ||| ||||||| |||||    
T  18156033 aaacaacggttattttcaagacacattcgaaattcaaaatcgaatggataagtttcgttagtt-actgcatttatagttttaaatttaaatctaggcagt 18156131  T
Q  363 tatttctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaa 461  Q
    |||||||||||||||||||||||| ||| |||| | ||||| ||||||||  | |||||||| ||||||||| |||||| |||||||||| |||||||||    
T  18156132 tatttctatttgtataaatagtagcttttcctaaggaaaaaaggtcacaatccaatcatacacaaaacttacactcaaattatccgcatggaagagagaa 18156231  T
Q  462 acgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattca 560  Q
    ||||||||||||||||||||||||||| ||||||| || ||| ||||||||||  ||||| || ||||||||  ||||||||||||||||||       |    
T  18156232 acgagtcacaagttgcaatgtatgaatctgtgtaccaatttatattcaatcaatgcaatttaagttcattttcctaaatgtctttacaattt-------a 18156324  T
Q  561 cttgtttcttttgagcaattca-tttacggttatttacacc-aatttcgattgggttcaactgggttgaattcgatagctttttcttactttattt-tat 657  Q
    |||||||| |||||||||||||  ||||   |||||   || || ||||||||| ||||||| |||||||| |||| |||||       ||||||| | |    
T  18156325 cttgtttcgtttgagcaattcacgttacttgtatttttgcctaacttcgattggattcaactaggttgaatccgattgcttt-------tttatttcttt 18156417  T
Q  658 ttatcaaattcttcaagaataacattaaatttctggaagataacaagcacaaatatgtcctta 720  Q
    ||||||| ||||||||||| || | ||||||||||||||||||||| ||| ||||||||||||    
T  18156418 ttatcaagttcttcaagaacaataataaatttctggaagataacaaacac-aatatgtcctta 18156479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 287 - 642
Target Start/End: Complemental strand, 20024673 - 20024324
Alignment:
Q  287 cattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtag 386  Q
    |||| |||||||||||| ||||| |||| || |||||||| ||||||||||||||||| |  |||||||| |||||||||||||| ||||||||||||||    
T  20024673 catttgaaattcaaatcaaatggctaagattagttagttttctgcagttatagttttaaac-caaatctaggcagttatttctatctgtataaatagtag 20024575  T
Q  387 ttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatg 485  Q
    |||  | || | |||||||||||||| || |||||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  20024574 tttctcttaaggaaaaagggtcacaattcaatcatacaaaaa-cttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatg 20024476  T
Q  486 aatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatt 584  Q
    ||||||||||| ||  |||||||||||||  || || || |||||||| |||||||||||| ||||||       ||||||||||||| ||||| |||||    
T  20024475 aatatgtgtaccaatctacattcaatcaatgcattttaagttcattttcttaaatgtctttgcaattt-------acttgtttcttttaagcaactcatt 20024383  T
Q  585 tacggttatttacaccaat-ttcgattgggttcaactgggttgaattcgatagcttttt 642  Q
     ||  ||| |||  ||  | ||||||||| |||||||||||||||||| || |||||||    
T  20024382 cacttttacttatcccggtcttcgattggattcaactgggttgaattctattgcttttt 20024324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 288 - 582
Target Start/End: Original strand, 16832018 - 16832311
Alignment:
Q  288 attcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaat----ctatgcagttatttctatttgtataaatag 383  Q
    |||||||||||||||||||||||||||| ||||| ||||   || ||| || ||| | ||||||||    ||| | ||||||||||||| ||||||||||    
T  16832018 attcgaaattcaaatcgaatggataagtgttgttcgtttttagccgttgtaatttcaaattcaaatatagctaggaagttatttctattagtataaatag 16832117  T
Q  384 tagttt-tccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgt 482  Q
    |||||| || | ||  ||   | ||||||  | |||||||| ||||||||| |||||| |||||||||  ||||||||||||||||||||||||||||||    
T  16832118 tagtttctcgcaagggaacgtgatcacaatccaatcatacacaaaacttacactcaaattatccgcattgaagagagaaacgagtcacaagttgcaatgt 16832217  T
Q  483 atgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttgagcaattc 581  Q
    ||||| |||||||| || ||||||||||||||  ||||| ||||||||||| ||  |||||||||||||||       ||||||||||||||||||||||    
T  16832218 atgaacatgtgtaccaatttacattcaatcaatgcaatttaaattcattttcttttatgtctttacaattt-------acttgtttcttttgagcaattc 16832310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 555 - 673
Target Start/End: Original strand, 40936793 - 40936909
Alignment:
Q  555 aattcacttgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattt 654  Q
    |||| |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| ||  |||||  ||||||| |||    
T  40936793 aatttacttgtttcttttgagcaattcatttatcgttatttacaccgatttcgattgggttcaactgggttgaattcaattactttt--ttactttcttt 40936890  T
Q  655 tatttatcaaattcttcaa 673  Q
    |||||||||  ||||||||    
T  40936891 tatttatcacgttcttcaa 40936909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 367 - 493
Target Start/End: Original strand, 21530296 - 21530424
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||||||||||||| |||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| |||||||| ||| ||| || |||||    
T  21530296 tctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactatccgtatggaagcgacaaacg 21530395  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  21530396 agtcacaagttgcaaagtatgaatatgtg 21530424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 26274238 - 26274110
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||||||||||||| |||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||    
T  26274238 tctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagtgacaaacg 26274139  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  26274138 agtcacaagttgcaaagtatgaatatgtg 26274110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 21504629 - 21504758
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||||||||||||| |||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||    
T  21504629 tctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 21504728  T
Q  465 agtcacaagttgcaatgtatgaatatgtgt 494  Q
    ||| ||||||||||| ||||||||||||||    
T  21504729 agtaacaagttgcaaagtatgaatatgtgt 21504758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 367 - 507
Target Start/End: Complemental strand, 20506460 - 20506318
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| |||||  |||||||| || |||||||  ||||||||| ||||| ||| |||| ||| ||| || |||||    
T  20506460 tctatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactcaaaacttacactcaatactgtccgtatggaagcgacaaacg 20506361  T
Q  465 agtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||| ||||||||||| ||||||||||||| || ||||| ||||    
T  20506360 agttacaagttgcaaagtatgaatatgtgcaccaactttcatt 20506318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 21982753 - 21982626
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||||| |||||||||||||||| | ||| |||||  |||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  21982753 ctatttatataaatagtagtttttcttaggaaaaataggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 21982654  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||  |||||||||||||    
T  21982653 gtcacaagttgcagagtatgaatatgtg 21982626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 10624010 - 10624084
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||| | ||||||| |||||||    
T  10624010 gtgttagccaatatttttaaaggctatcattaaatgcagtcaaagtaggttgaccttgtaatcgaaggaattgtt 10624084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 396 - 514
Target Start/End: Complemental strand, 19859691 - 19859574
Alignment:
Q  396 gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgta 495  Q
    |||||| ||||||||| || |  ||||| ||||||||| |||||||||||  |||  || |||||||||||| ||||||  |||||||||||| ||||||    
T  19859691 gaaaaacgggtcacaattcaacaatacagaaaacttacactcaaactatcaacatctaa-agagaaacgagttacaagtcccaatgtatgaatttgtgta 19859593  T
Q  496 caaacttacattcaatcaa 514  Q
    | || ||||||||||||||    
T  19859592 ccaatttacattcaatcaa 19859574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 416 - 511
Target Start/End: Complemental strand, 20249337 - 20249243
Alignment:
Q  416 atcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaat 511  Q
    |||||||||||||||||  |||||||||||| |||  | |||||||||| || ||||||  |||||||||||| ||||||| || |||||||||||    
T  20249337 atcatacaaaaaacttatactcaaactatccacattca-gagagaaacgggtaacaagtcacaatgtatgaatctgtgtactaatttacattcaat 20249243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 18155852 - 18155926
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    |||||||||||||||||| |||| ||||||| ||||| |||||| ||||||||| || | ||||||| |||||||    
T  18155852 gtgttagccaatattttttaaggatatcattaaatgcagtcaaagtaggttgacattgtaatcgaaggaattgtt 18155926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 19212406 - 19212515
Alignment:
Q  404 ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaactta 503  Q
    |||||||| || |||||| ||||||||||| ||||||||||||||||   ||||| |||||||| |||  |   |||||| |||| ||||||| || |||    
T  19212406 ggtcacaattcaatcatataaaaaacttacactcaaactatccgcat-ttagagataaacgagttacacatcaaaatgtacgaatctgtgtaccaattta 19212504  T
Q  504 cattcaatcaa 514  Q
    |||||||||||    
T  19212505 cattcaatcaa 19212515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 849 - 888
Target Start/End: Original strand, 4154468 - 4154507
Alignment:
Q  849 gggagatctggaggacagtgagacttcagagagatggaga 888  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  4154468 gggagatctggaggacagtgagagttctgagagatggaga 4154507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 645
Target Start/End: Original strand, 18024462 - 18024547
Alignment:
Q  561 cttgtttcttttgagcaattcatttacggttatttacaccaat-ttcgattgggttcaactgggttgaattcgatagctttttctt 645  Q
    |||||||||||||| | ||||||||||  ||||||| || | | || |||||| |||||||||||||||||| ||  |||||||||    
T  18024462 cttgtttcttttgaaccattcatttactcttatttatactagtctttgattggattcaactgggttgaattcaattactttttctt 18024547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 493
Target Start/End: Original strand, 21507881 - 21507914
Alignment:
Q  460 aaacgagtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||||||||| |||||||||||||    
T  21507881 aaacgagtcacaagttgcaaagtatgaatatgtg 21507914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 242; Significance: 1e-133; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 242; E-Value: 1e-133
Query Start/End: Original strand, 76 - 720
Target Start/End: Complemental strand, 1836 - 1208
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggac 175  Q
    ||||||||||||||||||||||| ||||||  ||| | ||||||||||||||||||| |  |||||| || |||| |||| || | ||||||||||||||    
T  1836 gtgttagccaatatttttaaaggctatcatcaaattcagtcaaaataggttgaccttgtattcgaaggaactgttctctcatt-cttatcgaagttggac 1738  T
Q  176 ttgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaagttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggata 275  Q
    ||| || ||| |||||  ||||  || | | ||||||||| ||| |||||||||||| |  | || || |  || ||||||||||| ||| |||   |||    
T  1737 ttgctggaaa-tactcggaagcacgtctttcagttcgacaagcgaaaagttatcgaaaggaagttttttta-tggttcagataaggtcaagcaacaaata 1640  T
Q  276 ttttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgt 375  Q
    ||| ||||||||||||||||||||||||||||||||| |  | |||||||||||||| ||||||||||| ||||||||||| | ||||||||||||||||    
T  1639 tttccaagacacattcgaaattcaaatcgaatggatatgcatcgttagtttactgcaattatagttttaaattcaaatctaggtagttatttctatttgt 1540  T
Q  376 ataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagt 474  Q
    ||||||||||||||| |||| | |||||||||||||| || |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  1539 ataaatagtagtttttcctaaggaaaaagggtcacaagtcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagt 1440  T
Q  475 tgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttg 573  Q
    ||||||||||||| |||||||| || ||||||||||||||  ||||| || |||||||| |||||||||||||||||||       ||||||||||||||    
T  1439 tgcaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagttcattttcttaaatgtctttacaattt-------acttgtttcttttg 1347  T
Q  574 agcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttcaa 673  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||   | ||| ||||||| |    |||||| | ||||| |     
T  1346 agcaattcatttacctttatttacaccgatttcgattgggttcaactgggttgaatttgat---tgttttttactttct----tttatcgagttctttag 1254  T
Q  674 gaataacattaaatttctggaagataacaagcacaaatatgtcctta 720  Q
    ||| || ||||||||||||||| ||||||| ||| ||||||||||||    
T  1253 gaacaatattaaatttctggaaaataacaaacac-aatatgtcctta 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 220; Significance: 1e-120; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 77 - 709
Target Start/End: Complemental strand, 40343274 - 40342663
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggact 176  Q
    |||||||||||||||||||||| ||||||| || || || |||||||||||||||| | ||||||||||||||| |||   ||| |||||||||||||||    
T  40343274 tgttagccaatatttttaaaggctatcattaaacgcagttaaaataggttgaccttgtgatcgaagaaattgttctct---ttcgtatcgaagttggact 40343178  T
Q  177 tgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaa-gttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggata 275  Q
    || |||||| | ||| ||| || |||| ||||||||||  | | ||| ||||||||||| ||  | ||         | ||||||| ||| |||  ||||    
T  40343177 tgctgaaaa-tgctcgaaaacgcgtgttttagttcgacgggtgaaaaagttatcgaagggcaggtttt---------cggataaggtcaagcaaccgata 40343088  T
Q  276 ttttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgt 375  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||  ||||||||||| | ||||||||||||||||    
T  40343087 ttttcaagacacattcgaaattcaaatcgaatgaataagtattgttagtttactacagttatagttttgaattcaaatctaggtagttatttctatttgt 40342988  T
Q  376 ataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagt 474  Q
    ||||||||||||||||| ||   ||||| |||||||| || |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  40342987 ataaatagtagttttccttaatgaaaagtggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagt 40342888  T
Q  475 tgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttg 573  Q
    ||||||||||||| |||||||| || ||||||| ||||||  ||||| || ||  |||| |||||||||||| ||||||       ||||||||||||||    
T  40342887 tgcaatgtatgaacatgtgtaccaatttacatttaatcaatgcaatttaagtttgttttcttaaatgtctttgcaattt-------acttgtttcttttg 40342795  T
Q  574 agcaattca-tttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagctttttcttactttattttatttatcaaattcttca 672  Q
    | || || | |||||  |||||| ||||||||||| |||  ||||| ||||||||||||||| ||||    ||||||| ||||||||||||| |||||||    
T  40342794 aacattttactttacttttattt-caccaatttcggttgaattcaattgggttgaattcgattgctt----ttactttcttttatttatcaagttcttca 40342700  T
Q  673 agaataacattaaatttctggaagataacaagcacaa 709  Q
    |||||||| |||||||||||||| ||||||| |||||    
T  40342699 agaataactttaaatttctggaaaataacaaacacaa 40342663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 264 - 582
Target Start/End: Complemental strand, 10828043 - 10827729
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  10828043 aaacaacgaatattttcaagacacattcgaaattcaaattgaatggataagtttcgttagtt-actgcagttatagttttaaattcaaatctaggcagtt 10827945  T
Q  364 atttctatttgtataaatagtagttttcccta---gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagaga 460  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||   | |||||||| ||||||||| |||||| |||||||||| ||||||||    
T  10827944 atttctatttgtataaatagtagttttccctaagggaaaaaagggtcacagtccaatcatacacaaaacttacactcaaattatccgcatggaagagaga 10827845  T
Q  461 aacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattc 559  Q
    |||||||||||||||||||||||||||| ||||||| || | ||||||||||||  ||||| || ||||||||  ||||||||||||||||||           
T  10827844 aacgagtcacaagttgcaatgtatgaatctgtgtaccaattcacattcaatcaatgcaatttaagttcattttcctaaatgtctttacaattt------- 10827752  T
Q  560 acttgtttcttttgagcaattca 582  Q
    |||||||||||||||||||||||    
T  10827751 acttgtttcttttgagcaattca 10827729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 264 - 582
Target Start/End: Complemental strand, 11021835 - 11021521
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  11021835 aaacaacgaatattttcaagacacattcgaaattcaaattgaatggataagtttcgttagtt-actgcagttatagttttaaattcaaatctaggcagtt 11021737  T
Q  364 atttctatttgtataaatagtagttttcccta---gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagaga 460  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||   | |||||||| ||||||||| |||||| |||||||||| ||||||||    
T  11021736 atttctatttgtataaatagtagttttccctaagggaaaaaagggtcacagtccaatcatacacaaaacttacactcaaattatccgcatggaagagaga 11021637  T
Q  461 aacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattc 559  Q
    |||||||||||||||||||||||||||| ||||||| || | ||||||||||||  ||||| || ||||||||  ||||||||||||||||||           
T  11021636 aacgagtcacaagttgcaatgtatgaatctgtgtaccaattcacattcaatcaatgcaatttaagttcattttcctaaatgtctttacaattt------- 11021544  T
Q  560 acttgtttcttttgagcaattca 582  Q
    |||||||||||||||||||||||    
T  11021543 acttgtttcttttgagcaattca 11021521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 292 - 676
Target Start/End: Original strand, 18752572 - 18752945
Alignment:
Q  292 gaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttc 391  Q
    ||||||||||||| |||| |||| || |||||||| ||||||||||||||||    |||||||||  ||||||||||||||||||||||||||| ||||     
T  18752572 gaaattcaaatcgtatggctaagattagttagttttctgcagttatagtttt----tcaaatctagacagttatttctatttgtataaatagtaattttt 18752667  T
Q  392 cctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatat 490  Q
      ||| ||||||||||||||| || |||||||||||  |||||||||||| |||||| ||| ||  |||||| ||||||||||||||||||||||||| |    
T  18752668 tttaggaaaaaagggtcacaattcaatcatacaaaa--cttacgctcaaattatccgtatggaatcgagaaatgagtcacaagttgcaatgtatgaatct 18752765  T
Q  491 gtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacgg 589  Q
    |||||| |||||||||||||||||  ||||| || ||||||| ||||||||||||| ||||||       |||||||||||||||| |||||||||||      
T  18752766 gtgtaccaacttacattcaatcaatgcaatttaagttcatttctttaaatgtctttgcaattt-------acttgtttcttttgagtaattcatttactt 18752858  T
Q  590 ttatttacacca-atttcgattgggttcaactgggttgaattcgatagctttttcttactttattttattt--atcaaattcttcaagaa 676  Q
    |||||| || || ||||||||||| ||||||||||||||||||||| || ||   |||||| |||||||||  ||||| |||||||||||    
T  18752859 ttatttgcatcatatttcgattggattcaactgggttgaattcgattgcctt---ttacttaattttattttcatcaagttcttcaagaa 18752945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 272 - 478
Target Start/End: Complemental strand, 24876605 - 24876397
Alignment:
Q  272 gatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctat 371  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||| || |||||||| ||| | ||||||||||| | || | | |||||    
T  24876605 gatattttcaagacacattcgaaattcaaatcgaatggataagtatagttagttttctacagttataatttcaaattcaaatctaggaagctttatctat 24876506  T
Q  372 ttgtataaatagtagttttccctag--aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtca 469  Q
    |||||||||||||||||||||||||  ||||||||||||||| || |||||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  24876505 ttgtataaatagtagttttccctaggaaaaaaagggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtca 24876406  T
Q  470 caagttgca 478  Q
    |||||||||    
T  24876405 caagttgca 24876397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 77 - 382
Target Start/End: Complemental strand, 13347029 - 13346726
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgttttctcctttcctatcgaagttggact 176  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| || | |||||||||||||||    
T  13347029 tgttagccaatatttttaaaggctatcatttaatgcagtcaaaatagattgaccttgtcatcgaagaaattgttttctcatt-cttatcgaagttggact 13346931  T
Q  177 tgatgaaaaatactcaaaagcgtgtgtgttagttcgacatgcggaaa-gttatcgaaggacaattcttgtgctgattcagataaggacaaacaatggata 275  Q
    || |||||| | ||| |||||| |||| |||||| |||  ||  ||| ||||| ||||| || || ||||  || ||| ||||| | |||  ||   |||    
T  13346930 tgctgaaaa-tgctcgaaagcgcgtgttttagtttgacgggcaaaaaagttattgaagggcagtt-ttgttgtggttcggataaagtcaagtaacaaata 13346833  T
Q  276 ttttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgt 375  Q
    ||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||   ||||||||||||||||    
T  13346832 tttccaagacacattcgaaattcaaatcgaatggataagtattgttagtttcctgcagttatagttttaaattcaaatctagatagttatttctatttgt 13346733  T
Q  376 ataaata 382  Q
    |||||||    
T  13346732 ataaata 13346726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 264 - 392
Target Start/End: Original strand, 10864057 - 10864184
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||    
T  10864057 aaacaacgaatattttcaagacacatttgaaattcaattcgaatggataagttttgttagtt-actgcagttatagttttaaattcaaatctagacagtt 10864155  T
Q  364 atttctatttgtataaatagtagttttcc 392  Q
    |||||||||||||||||||||||||||||    
T  10864156 atttctatttgtataaatagtagttttcc 10864184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 374 - 514
Target Start/End: Complemental strand, 41239358 - 41239219
Alignment:
Q  374 gtataaatagtagttttccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaag 473  Q
    ||||||||| ||||||| | |||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||   |||||||||||||| |||||    
T  41239358 gtataaatactagtttttcatagaaaaaagggtcacaattcaatcatacataaaacttacgctcaaactatccggat-tcagagagaaacgagtaacaag 41239260  T
Q  474 ttgcaatgtatgaatatgtgtacaaacttacattcaatcaa 514  Q
    |  |||||||||||| ||||||| || ||||||| ||||||    
T  41239259 tcacaatgtatgaatctgtgtaccaatttacatttaatcaa 41239219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 371 - 554
Target Start/End: Complemental strand, 11989536 - 11989350
Alignment:
Q  371 tttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtc 468  Q
    |||||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| ||||| |||||||| ||| ||| || |||||||||    
T  11989536 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacactcaatactatccgtatggaagcgacaaacgagtc 11989437  T
Q  469 acaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    | |||||||||||||||||  |||| || ||| |  ||||| ||||  |||||  ||| ||||| ||||||||||||| ||||||||    
T  11989436 ataagttgcaatgtatgaacgtgtgcaccaacctttattcagtcaatgcaatttcaatacatttctttaaatgtctttgcaatttac 11989350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 44277810 - 44277669
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||||||||| ||||||||| ||  |||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  44277810 ctatctgtataaatagtagtttttcttagaaaaaatgggtcacaattcagtcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 44277711  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| |||||||||||||||| ||||| ||||    
T  44277710 gtcacaagttgcaaagtatgaatatgtgtaccaactttcatt 44277669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 368 - 496
Target Start/End: Complemental strand, 14036011 - 14035881
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  14036011 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaactcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 14035912  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtac 496  Q
    || ||||||||||| ||||||||||||||||    
T  14035911 gttacaagttgcaaagtatgaatatgtgtac 14035881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 368 - 496
Target Start/End: Complemental strand, 14346041 - 14345911
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  14346041 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaactcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 14345942  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtac 496  Q
    || ||||||||||| ||||||||||||||||    
T  14345941 gttacaagttgcaaagtatgaatatgtgtac 14345911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 448 - 582
Target Start/End: Original strand, 10864186 - 10864314
Alignment:
Q  448 catgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtcttta 546  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||||  ||||| || ||||||||  |||||||| |||    
T  10864186 catggaagagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaattcacattcaatcaatgcaatttaagttcattttcctaaatgtcctta 10864285  T
Q  547 caatttacaattcacttgtttcttttgagcaattca 582  Q
    ||||||       |||||||||||||||||||||||    
T  10864286 caattt-------acttgtttcttttgagcaattca 10864314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 14323848 - 14323707
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||||||||||||| || ||||||| ||| |||||| ||||| ||| |||| ||| ||| || ||||||    
T  14323848 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaactcaatcatactaaacacttacactcaatactgtccgtatggaagcgacaaacga 14323749  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||||||||||||||| ||||| ||||    
T  14323748 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 14323707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 373 - 507
Target Start/End: Complemental strand, 18175000 - 18174864
Alignment:
Q  373 tgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| ||||  ||| || || |||||||||||    
T  18175000 tgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtgtgagagcgacaaacgagtcac 18174901  T
Q  471 aagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||| |||||||||||||||| ||||| ||||    
T  18174900 aagttgcaaagtatgaatatgtgtaccaactttcatt 18174864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 18115366 - 18115226
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||| ||||| ||||| ||| |||| ||| ||| || ||||||    
T  18115366 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaa-cttacactcaatactgtccgtatggaagtgacaaacga 18115268  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||||||||||||||| ||||| ||||    
T  18115267 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 18115226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 18141934 - 18141794
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||| ||||| ||||| ||| |||| ||| ||| || ||||||    
T  18141934 ctatctgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaa-cttacactcaatactgtccgtatggaagcgacaaacga 18141836  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||||||||||||||| ||||| ||||    
T  18141835 gttacaagttgcaaagtatgaatatgtgtaccaactttcatt 18141794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 24876792 - 24876718
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    ||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||| | |||||||||||||||    
T  24876792 gtgttagccaatatttttaaaggctatcattaaatacggttaaaataggttgaccttgtaatcgaagaaattgtt 24876718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 367 - 496
Target Start/End: Complemental strand, 1978363 - 1978232
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | |||  |||| ||||||||| || |||||||  |||| |||| ||||| | | |||| ||||||| || |||||    
T  1978363 tctatttgtataaatagtagtttttcttagggaaaacgggtcacaattcaatcatactcaaaatttacactcaatattgtccgtatgaaagcgacaaacg 1978264  T
Q  465 agtcacaagttgcaatgtatgaatatgtgtac 496  Q
    ||||||||||||||| ||||||| ||||||||    
T  1978263 agtcacaagttgcaaagtatgaacatgtgtac 1978232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 367 - 496
Target Start/End: Original strand, 15758551 - 15758682
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||| |||||||||||||||||| | ||| |||||| |||||||| || |||||||  ||||||||| ||||| | | |||| ||| ||| || |||||    
T  15758551 tctatctgtataaatagtagtttttcttaggaaaaagaggtcacaattcaatcatactcaaaacttacactcaatattgtccgtatggaagcgacaaacg 15758650  T
Q  465 agtcacaagttgcaatgtatgaatatgtgtac 496  Q
    ||||||||||||||| ||||||| ||||||||    
T  15758651 agtcacaagttgcaaagtatgaacatgtgtac 15758682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 405 - 507
Target Start/End: Complemental strand, 18160197 - 18160094
Alignment:
Q  405 gtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaactta 503  Q
    ||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||||||||||||||| |||||||||||||||| |||||     
T  18160197 gtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgtaccaacttt 18160098  T
Q  504 catt 507  Q
    ||||    
T  18160097 catt 18160094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 511
Target Start/End: Complemental strand, 16713400 - 16713271
Alignment:
Q  381 tagtagttttccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaat 480  Q
    |||||||||| | ||  |||||||||||||| || |||||||| ||||| ||| ||||||||||| ||||  | ||||||||||||| | ||||  | ||    
T  16713400 tagtagtttttcataccaaaaagggtcacaattcaatcatacagaaaacgtacactcaaactatctgcattca-gagagaaacgagtaataagtcacgat 16713302  T
Q  481 gtatgaatatgtgtacaaacttacattcaat 511  Q
    |||||||||||||||| || |||||||||||    
T  16713301 gtatgaatatgtgtaccaatttacattcaat 16713271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 511
Target Start/End: Complemental strand, 17687636 - 17687507
Alignment:
Q  381 tagtagttttccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaat 480  Q
    |||||||||| | ||  |||||||||||||| || |||||||| ||||| ||| ||||||||||| ||||  | ||||||||||||| | ||||  | ||    
T  17687636 tagtagtttttcataccaaaaagggtcacaattcaatcatacagaaaacgtacactcaaactatctgcattca-gagagaaacgagtaataagtcacgat 17687538  T
Q  481 gtatgaatatgtgtacaaacttacattcaat 511  Q
    |||||||||||||||| || |||||||||||    
T  17687537 gtatgaatatgtgtaccaatttacattcaat 17687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 511
Target Start/End: Complemental strand, 10478303 - 10478189
Alignment:
Q  396 gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgta 495  Q
    |||||| ||||||||| || | |||||| ||||||||| |||||||||||| |||  | ||||||||||||| ||||||   ||||||||||| ||||||    
T  10478303 gaaaaacgggtcacaattcaaccatacagaaaacttacactcaaactatccacattta-gagagaaacgagttacaagtcaaaatgtatgaatctgtgta 10478205  T
Q  496 caaacttacattcaat 511  Q
    | || |||||||||||    
T  10478204 ccaatttacattcaat 10478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 10828222 - 10828149
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    |||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||| | ||||||| | |||||    
T  10828222 tgttagccaatatttttaaagggtatcattaaatgcagtcaaagtaggttgaccttgtaatcgaaggatttgtt 10828149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 11022014 - 11021941
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    |||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||| | ||||||| | |||||    
T  11022014 tgttagccaatatttttaaagggtatcattaaatgcagtcaaagtaggttgaccttgtaatcgaaggatttgtt 11021941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 10863879 - 10863952
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    ||||||||||||||||||| || ||||||| ||||  |||||| |||||||||||| | ||||||| |||||||    
T  10863879 tgttagccaatatttttaatgggtatcattaaatgtagtcaaagtaggttgaccttgtaatcgaaggaattgtt 10863952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 18450811 - 18450920
Alignment:
Q  404 ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaactta 503  Q
    |||||||| || | |||||| ||||||||| || ||||||| |||||  | ||||||||||||| ||||||   ||||||||||| ||||||| ||  ||    
T  18450811 ggtcacaattcaaccatacagaaaacttacacttaaactattcgcattta-gagagaaacgagtaacaagtcataatgtatgaatttgtgtaccaatgta 18450909  T
Q  504 cattcaatcaa 514  Q
    |||||||||||    
T  18450910 cattcaatcaa 18450920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 264 - 703
Target Start/End: Original strand, 36211 - 36653
Alignment:
Q  264 aaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagtt 363  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  36211 aaacaacggataatttcaagacatattcgaaattcaaatcgaatggataagtttcgttagtt-actgcagttatagttttaaattcaaatctaggcagtt 36309  T
Q  364 atttctatttgtataaatagtagttttccctaga-aaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaa 462  Q
    |||  |||||| |||||||||||||||| || |  ||||||||  ||||  | || |||||||| |||| | ||| || ||| |||||| ||||||||||    
T  36310 attaatatttgcataaatagtagttttcgctggggaaaaagggctacaatccaataatacaaaatactttcactctaattattcgcatggaagagagaaa 36409  T
Q  463 cgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt--tttaaatgtctttacaatttacaattca 560  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||  |||||  |||||||| |||||||  || |||||||||| |||||||||||| |    
T  36410 cgagtcacaagttgcaatgtatgaacatgtgtaccaacttacatttgatcaattcaattcaagttcatttacttaaaatgtctttgcaatttacaattta 36509  T
Q  561 cttgtttcttttgagcaattcatttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagc-tttttcttactttattttattt 659  Q
    |||||||| |||||||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||     
T  36510 cttgtttcatttgagcaattcatttccagttatttacaccgatttcgattggattcaactgggttgaattcgattgcttttttcttactttattttattc 36609  T
Q  660 atcaaattcttcaagaataacattaaatttctggaagataacaa 703  Q
    ||||| |||||||||||||  ||||| |||||| || |||||||    
T  36610 atcaagttcttcaagaatagtattaagtttctgaaaaataacaa 36653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 36039 - 36104
Alignment:
Q  85 aatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgtt 150  Q
    |||||||||||||| ||||||||||||| |||||| |||||||| ||| | ||||||| |||||||    
T  36039 aatatttttaaaggctatcatttaatgcagtcaaagtaggttgatcttgtaatcgaaggaattgtt 36104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 143; Significance: 1e-74; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 274 - 642
Target Start/End: Original strand, 70533 - 70898
Alignment:
Q  274 tattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttaga-ttcaaatctatgcagttatttctatt 372  Q
    |||| |||| ||||||||||| |||||| |||||| |||| ||||||||  ||| ||| |||||||||||| | ||| |||||| |||||||||||||||    
T  70533 tattctcaaaacacattcgaatttcaaaacgaatgaataacttttgttaagttattgcggttatagttttaaaattcgaatctaggcagttatttctatt 70632  T
Q  373 tgtataaatagtagttttccctagaaaaaaggg-tcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcaca 471  Q
    |||||||||||||||||||| |||  |||| || |||||| || ||||||||||| |||||| |||||| |||||||||| |||||||||||||||||||    
T  70633 tgtataaatagtagttttccatagggaaaacggatcacaattcaatcatacaaaatacttacactcaaattatccgcatggaagagagaaacgagtcaca 70732  T
Q  472 agttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttctt 570  Q
    |||||||||||||||| |||| ||| || ||||||||| ||||  ||||| || |||||||| |||||||||||||||  ||        ||||| ||||    
T  70733 agttgcaatgtatgaacatgtttaccaatttacattcagtcaatgcaatttaagttcattttcttaaatgtctttacagctt-------tcttgtctctt 70825  T
Q  571 ttgagcaattcatttacggttatttacaccaat-ttcgattgggttcaactgggttgaattcgatagcttttt 642  Q
    |||||||||||||||||  ||||||| |||  | ||||||||| ||||||||||||||||||||| |||||||    
T  70826 ttgagcaattcatttacttttatttataccggtcttcgattggattcaactgggttgaattcgattgcttttt 70898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 70346 - 70398
Alignment:
Q  79 ttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgacctt 132  Q
    ||||||||||||||| ||||  |||||||||| | |||||||||||||||||||    
T  70346 ttagccaatatttttgaaggc-atcatttaatacagtcaaaataggttgacctt 70398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 139; Significance: 3e-72; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 255 - 640
Target Start/End: Complemental strand, 250337 - 249957
Alignment:
Q  255 gataaggacaaacaatggatattttcaagacacattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatc 354  Q
    ||||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||  |||| ||||    
T  250337 gataaggtcaaacaatggatatttccaaggcgcattcgaaattcaaatcgaatggataagacttgttagtttactgcagttataggtttgaattcgaatc 250238  T
Q  355 tatgcagttatttctatttgtataaatagtag-ttttccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaa 453  Q
    || | ||||||||  ||||||||||||||||| ||||||| || ||||  ||||||||  | |||||||| ||||||||| |||||| |||||  ||| |    
T  250237 taggtagttattttgatttgtataaatagtagtttttcccaaggaaaagtggtcacaatccaatcatacacaaaacttacactcaaattatccatatgga 250138  T
Q  454 agagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaattt 552  Q
    || |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| ||| || || || ||||| |||| || ||||||| |||    
T  250137 agcgagaaacgagtcacaagttgcaatgtatgaatttgtgtaccaatttacattcaatcaatacattttaagtttattttcttaagtgcctttacatttt 250038  T
Q  553 acaattcacttgtttcttttgagcaattca-tttacggttatttacaccaatttcgattgggttcaactgggttgaattcgatagcttt 640  Q
           ||||||||||||||| ||||| | ||||| |||| ||| || ||||||||||| |||||||| ||||||||| ||| |||||    
T  250037 -------acttgtttcttttgaacaatttattttactgttactta-acaaatttcgattgagttcaacttggttgaatttgattgcttt 249957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 128; Significance: 1e-65; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 296 - 646
Target Start/End: Original strand, 8903 - 9247
Alignment:
Q  296 ttcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttcccta 395  Q
    ||||||||  |||| |||| || ||||||||  ||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||  | ||    
T  8903 ttcaaatcatatggctaagattagttagttttatgcagttatagttttagac-caaatctaggcagttatttctatttgtataaatagtagtttctctta 9001  T
Q  396 -gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgt 494  Q
     | |||||| ||||||| || |||||||||||| |||||  ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  9002 aggaaaaagagtcacaattcaatcatacaaaaa-cttacattcaaattatccgcatggaagagagaaacaagtcacaagttgcaatgtatgaatatgtgt 9100  T
Q  495 acaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacggttat 593  Q
    || ||  |||||||||||||  ||||| || |||||||| |||||||||||| ||||||       ||||||||||||||||||||||||| ||  ||||    
T  9101 accaatctacattcaatcaatgcaatttaagttcattttcttaaatgtctttgcaattt-------acttgtttcttttgagcaattcattcacttttat 9193  T
Q  594 ttacaccaat-ttcgattgggttcaactgggttgaattcgatagctttttctta 646  Q
    ||| | |  | ||||||||| ||||||| ||||||||| ||| |||||||||||    
T  9194 ttatatcggtcttcgattggattcaactaggttgaatttgattgctttttctta 9247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 110; Significance: 6e-55; HSPs: 2)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 286 - 514
Target Start/End: Complemental strand, 3923 - 3696
Alignment:
Q  286 acattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagta 385  Q
    ||||| |||||||||||| ||||| |||| || |||||||| ||||||||||||||||  |  |||||||| ||||||||||||||||||||||||| ||    
T  3923 acatttgaaattcaaatcaaatggctaagattagttagttttctgcagttatagtttttaac-caaatctaggcagttatttctatttgtataaatatta 3825  T
Q  386 gttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtat 484  Q
    ||||  | || | |||||||||||||| || |||||||||||| ||||| |||||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  3824 gtttctcttaagtaaaaagggtcacaattcaatcatacaaaaa-cttacactcaaattatccgcatggaagagagaaacgagtcaaaagttgcaatgtat 3726  T
Q  485 gaatatgtgtacaaacttacattcaatcaa 514  Q
    |||||||||||| ||  |||||||||||||    
T  3725 gaatatgtgtaccaatctacattcaatcaa 3696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 560 - 642
Target Start/End: Complemental strand, 3680 - 3597
Alignment:
Q  560 acttgtttcttttgagcaattcatttacggttatttacaccaat-ttcgattgggttcaactgggttgaattcgatagcttttt 642  Q
    ||||||||||||||||||||||||||||  |||||||||||  | |||||| || ||||||||||||||||||||| |||||||    
T  3680 acttgtttcttttgagcaattcatttacttttatttacaccggtcttcgatcggattcaactgggttgaattcgattgcttttt 3597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 110; Significance: 6e-55; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 286 - 514
Target Start/End: Complemental strand, 102227 - 102000
Alignment:
Q  286 acattcgaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagta 385  Q
    ||||| |||||||||||| ||||| |||| || |||||||| ||||||||||||||||  |  |||||||| ||||||||||||||||||||||||| ||    
T  102227 acatttgaaattcaaatcaaatggctaagattagttagttttctgcagttatagtttttaac-caaatctaggcagttatttctatttgtataaataata 102129  T
Q  386 gttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtat 484  Q
    ||||  | || | |||||||||||||| || |||||||||||| ||||| |||||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  102128 gtttctcttaaggaaaaagggtcacaattcaatcatacaaaaa-cttacactcaaattatccgcatggaagagagaaacgagtcaaaagttgcaatgtat 102030  T
Q  485 gaatatgtgtacaaacttacattcaatcaa 514  Q
    |||||||||||| ||  |||||||||||||    
T  102029 gaatatgtgtaccaatctacattcaatcaa 102000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 560 - 642
Target Start/End: Complemental strand, 101984 - 101901
Alignment:
Q  560 acttgtttcttttgagcaattcatttacggttatttacaccaat-ttcgattgggttcaactgggttgaattcgatagcttttt 642  Q
    ||||||||||||||||||||||||||||  |||||||||||  | |||||| || ||||||||||||||||||||| |||||||    
T  101984 acttgtttcttttgagcaattcatttacttttatttacaccggtcttcgatcggattcaactgggttgaattcgattgcttttt 101901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 110; Significance: 6e-55; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 293 - 634
Target Start/End: Original strand, 200040 - 200372
Alignment:
Q  293 aaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttttcc 392  Q
    |||||||||||| |||  |||| || |||||||| ||||||||||||||||    || ||||||  |||||||||||||||||||||||||| ||||| |    
T  200040 aaattcaaatcgtatgactaagattagttagttttctgcagttatagtttt----tccaatctagacagttatttctatttgtataaatagttgtttttc 200135  T
Q  393 ctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatg 491  Q
     ||| ||||||||||||||| || |||||||||||| ||||| |||||| |||||  ||| ||| |||||| ||||||||||||||||||||||||| ||    
T  200136 ttaggaaaaaagggtcacaattcaatcatacaaaaa-cttacactcaaattatccttatggaagcgagaaatgagtcacaagttgcaatgtatgaatctg 200234  T
Q  492 tgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacggt 590  Q
    ||||| |||||| |||| |||||  ||||| || ||||||| |||||| |||||| ||||||       |||||||||||||||| |||||||||||  |    
T  200235 tgtaccaacttatattcgatcaatgcaatttaagttcatttctttaaacgtctttgcaattt-------acttgtttcttttgagtaattcatttacttt 200327  T
Q  591 tatttacacca-atttcgattgggttcaactgggttgaattcgat 634  Q
    ||||| || || | || |||||| ||||||| |||||||||||||    
T  200328 tatttgcatcatactttgattggattcaactaggttgaattcgat 200372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 106; Significance: 1e-52; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 292 - 642
Target Start/End: Original strand, 7343 - 7685
Alignment:
Q  292 gaaattcaaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagtt-tt 390  Q
    |||||||||||||||||| |||| || |||||||| ||||| ||||||||||  | ||||||||| ||||||||||||||||||||||||||| |||  |    
T  7343 gaaattcaaatcgaatggctaagattagttagttttctgcaattatagttttcaaatcaaatctaggcagttatttctatttgtataaatagttgttcct 7442  T
Q  391 ccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatat 490  Q
    |   || || ||||||| ||| || |||||||  ||||||||| |||||| |||||||||| |||||| |||||||||||| |||||||||||||| ||     
T  7443 cttaaggaataagggtcgcaattcaatcatac--aaaacttacactcaaattatccgcatggaagagataaacgagtcacatgttgcaatgtatgagta- 7539  T
Q  491 gtgtacaaacttacattcaatcaacacaattcaaattcatttt-ttaaatgtctttacaatttacaattcacttgtttcttttgagcaattcatttacgg 589  Q
      |||| ||  |||||||||||||  || || || |||||||| |||||||||||||||||||       |||||||||||||||| |||||||||||      
T  7540 -agtacgaatctacattcaatcaatgcattttaagttcattttcttaaatgtctttacaattt-------acttgtttcttttgagtaattcatttactt 7631  T
Q  590 ttatttaca-ccaatttcgattgggttcaactgggttgaattcgatagcttttt 642  Q
    |||||| || | || || |||||| || |||||||||||||||||| |||||||    
T  7632 ttatttgcatcaaactttgattggattaaactgggttgaattcgattgcttttt 7685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 7133 - 7186
Alignment:
Q  77 tgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgacct 131  Q
    ||||||||||||||||||| || ||||||||||| ||||||||  ||||||||||    
T  7133 tgttagccaatatttttaa-ggctatcatttaatacggtcaaagaaggttgacct 7186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 102; Significance: 4e-50; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 298 - 552
Target Start/End: Complemental strand, 68321 - 68064
Alignment:
Q  298 caaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatt-tctatttgtataaatagtagttttccctag 396  Q
    ||||||| |||| |||| || | |||||| |||| |||||||||||| |||  || ||| | ||||||| |||||||||||||||||||||||| | |||    
T  68321 caaatcgtatggctaagattaggtagttttctgcggttatagttttaaatttcaaactaggtagttattctctatttgtataaatagtagtttttcttag 68222  T
Q  397 -aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgta 495  Q
     ||||||| ||||||| || ||||||| |||||||||||||||||||||||  ||| ||| || ||||||||||||||||||||||||||||| ||||||    
T  68221 gaaaaaagagtcacaattcaatcatactaaaaacttacgctcaaactatccttatggaagcgataaacgagtcacaagttgcaatgtatgaatctgtgta 68122  T
Q  496 caaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaattt 552  Q
    | |||||||||||| ||||  ||||| || ||||||| | ||||||||||| ||||||    
T  68121 ctaacttacattcagtcaatgcaatttaagttcatttctctaaatgtctttgcaattt 68064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 298 - 552
Target Start/End: Complemental strand, 76426 - 76169
Alignment:
Q  298 caaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatt-tctatttgtataaatagtagttttccctag 396  Q
    ||||||| |||| |||| || | |||||| |||| |||||||||||| |||  || ||| | ||||||| |||||||||||||||||||||||| | |||    
T  76426 caaatcgtatggctaagattaggtagttttctgcggttatagttttaaatttcaaactaggtagttattctctatttgtataaatagtagtttttcttag 76327  T
Q  397 -aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgta 495  Q
     ||||||| ||||||| || ||||||| |||||||||||||||||||||||  ||| ||| || ||||||||||||||||||||||||||||| ||||||    
T  76326 gaaaaaagagtcacaattcaatcatactaaaaacttacgctcaaactatccttatggaagcgataaacgagtcacaagttgcaatgtatgaatctgtgta 76227  T
Q  496 caaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaattt 552  Q
    | | |||||||||  ||||  ||||| || ||||||| | ||||||||||| ||||||    
T  76226 ctatcttacattctgtcaatgcaatttaagttcatttctctaaatgtctttgcaattt 76169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 371 - 554
Target Start/End: Complemental strand, 33477 - 33292
Alignment:
Q  371 tttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtca 469  Q
    |||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||||||||||||||||  ||| ||| || ||||||||||    
T  33477 tttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacgctcaaactatccatatggaagcgataaacgagtca 33378  T
Q  470 caagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||  ||||| |||| ||||| |||||||| |||| ||||||||    
T  33377 caagttggaatgtatgaatatgtgtaccaacttacattcagtcaatgcaatttaaatacatttctttaaatgcctttgcaatttac 33292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 88; Significance: 8e-42; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 298 - 552
Target Start/End: Original strand, 107335 - 107593
Alignment:
Q  298 caaatcgaatggataagttttgttagtttactgcagttatagttttagattcaaatctatgcagttatt-tctatttgtataaatagtagttttcccta- 395  Q
    ||||||| |||| |||| || | |||||| |||| |||||||||||| |||  || ||| | ||||||| ||||||||||||||||||| ||||  ||      
T  107335 caaatcgtatggctaagattaggtagttttctgcggttatagttttaaatttcaaactaggtagttattctctatttgtataaatagtatttttttctta 107434  T
Q  396 -gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgt 494  Q
     ||||||| |||||||| || ||||||| ||||||||||||||| |||||||  ||| ||| || ||||||||||||||||||||||||||||| |||||    
T  107435 ggaaaaaaaggtcacaattcaatcatactaaaaacttacgctcagactatccttatggaagcgataaacgagtcacaagttgcaatgtatgaatctgtgt 107534  T
Q  495 acaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaattt 552  Q
    || |||||||||||  ||||  ||||| || ||||||| ||||||||||||| ||||||    
T  107535 accaacttacattccgtcaatgcaatttaagttcatttctttaaatgtctttgcaattt 107593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 129152 - 129339
Alignment:
Q  369 tatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagt 467  Q
    |||||||||||||||||||||| | ||| ||||||||||||||| || ||||||| ||||| |||||||||||||||||  ||| ||| || ||||||||    
T  129152 tatttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaatttacgctcaaactatccttatggaagcgataaacgagt 129251  T
Q  468 cacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||||||||||||||||| ||||||  |||||||||||| ||||  ||||| || ||||||| | ||||||||||| ||||||||    
T  129252 cacaagttgcaatgtatgaatctgtgtaacaacttacattcagtcaatgcaatttaagttcatttctctaaatgtctttgcaatttac 129339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 554
Target Start/End: Original strand, 129871 - 129952
Alignment:
Q  474 ttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||||||||||| ||| ||  |||||||||||| ||||  ||||| || ||||||| | ||||||||||| ||||||||    
T  129871 ttgcaatgtatgaatttgtatatcaacttacattcagtcaatgcaatttaagttcatttctctaaatgtctttgcaatttac 129952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 554
Target Start/End: Original strand, 144702 - 144783
Alignment:
Q  474 ttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||||||||||| ||| ||  |||||||||||| ||||  ||||| || ||||||| | ||||||||||| ||||||||    
T  144702 ttgcaatgtatgaatctgtatatcaacttacattcagtcaatgcaatttaagttcatttctctaaatgtctttgcaatttac 144783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 368 - 554
Target Start/End: Complemental strand, 45376 - 45187
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||||||||| | | |||| ||| ||| |  ||||||    
T  45376 ctatttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacgctcaatattgtccgtatggaagcggcaaacga 45277  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||  |||||  ||| ||||| ||||||||||||| ||||||||    
T  45276 gtcacaagttgcaatgtatgaatatgtgcaccaacttacattcaatcaatgcaatttcaatacatttctttaaatgtctttgcaatttac 45187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 360 - 554
Target Start/End: Complemental strand, 8931 - 8735
Alignment:
Q  360 agttatttctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagaga 458  Q
    ||||||||||  | ||||||||||||||||||| || | |||| |||||||||  | |||||||| ||||||||| |||||||||||| |||  ||||||    
T  8931 agttatttcttctagtataaatagtagttttccataaggaaaacgggtcacaatccaatcatacacaaaacttacactcaaactatccacattcaagaga 8832  T
Q  459 gaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcatt-ttttaaatgtctttacaatttac 554  Q
    ||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||  ||||| || || ||| | |||||||||||| ||||||||    
T  8831 gaaacgagtcacaagttacaatgtatgaacatgtgtaccaatttacattcaatcaatgcaatttaagtttattctcttaaatgtctttgcaatttac 8735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 794 - 888
Target Start/End: Complemental strand, 1383 - 1289
Alignment:
Q  794 ggaagaggtgtggtgctgacattgggaggatggtggtggtggggaggacgacggcgggagatctggaggacagtgagacttcagagagatggaga 888  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  1383 ggaagaggtgtggtgctgacagtgggagaatggtggtggtggggaggacgacggtgggagatctggaggacagtgagagttcagagagatggaga 1289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 1452 - 1415
Alignment:
Q  28 gacatcatgtgaaggtcgacgacgatggtggtgacgac 65  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  1452 gacatcatgtgaaggtcgacgacaatggtggtgacgac 1415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 330 - 514
Target Start/End: Original strand, 1251 - 1436
Alignment:
Q  330 gcagttatagttttagattcaaatctatgcagttatttctatttgtataaatagtagttt-tccctagaaaaaagggtcacaaatctatcatacaaaaaa 428  Q
    |||||| || ||| |||||||||| || | ||||||||||||| ||| |||||||||||| || | ||  |||  ||| ||||  | |||||||| ||||    
T  1251 gcagttgtaatttcagattcaaatataggtagttatttctattagtaaaaatagtagtttctctcaagggaaagtggttacaatccaatcatacacaaaa 1350  T
Q  429 cttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaa 514  Q
    ||||| |||||| ||| |||||| ||||||||||||||||||||||||||||||||||  |||||||| || ||||||||||||||    
T  1351 cttacactcaaattattcgcatggaagagagaaacgagtcacaagttgcaatgtatgatcatgtgtaccaatttacattcaatcaa 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 70; Significance: 4e-31; HSPs: 3)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 368 - 554
Target Start/End: Complemental strand, 17136 - 16947
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||| ||||||||| | ||||||||| ||||||||| || ||||||| |||||||| ||||||| | | | || ||| ||| || ||||||    
T  17136 ctatttgtataaagagtagtttttcttagaaaaaaagggtcacaattcaatcatactaaaaacttgcgctcaatattgttcgtatggaagcgacaaacga 17037  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||  |||||  | | ||||| ||||||||||||| ||||||||    
T  17036 gtcacaagttgcaatgtatgaacatgtgcaccaacttacattcaatcaatgcaatttcactacatttctttaaatgtctttgcaatttac 16947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 375 - 507
Target Start/End: Original strand, 5542 - 5674
Alignment:
Q  375 tataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaag 473  Q
    |||| ||||||||||| | || |||||| ||||||||| || |||||| | ||||||||| ||||||||||||||||   ||||||||| |||| |||||    
T  5542 tatagatagtagtttttcatatgaaaaacgggtcacaattcaatcatatagaaaacttacactcaaactatccgcat-tcagagagaaatgagtaacaag 5640  T
Q  474 ttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |  |||||||  ||| ||||||| || |||||||    
T  5641 tcacaatgtagtaatctgtgtaccaatttacatt 5674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 425 - 507
Target Start/End: Original strand, 3 - 84
Alignment:
Q  425 aaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||| ||||||||||||||||   ||||||||| |||| ||||||  ||||||| |||| ||||||| || |||||||    
T  3 aaaacttacactcaaactatccgcat-tcagagagaaatgagtaacaagtcacaatgtaggaatctgtgtaccaatttacatt 84  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 371 - 553
Target Start/End: Complemental strand, 20110 - 19925
Alignment:
Q  371 tttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtc 468  Q
    |||||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||||||||| | | |||| ||| |||  | ||| |||||    
T  20110 tttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacgctcaatattgtccgtatggaagctacaaatgagtc 20011  T
Q  469 acaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaattta 553  Q
    |||||||||||||||||||||  || || |||||||||||||||||  |||||  ||| ||||| |||||||| |||| |||||||    
T  20010 acaagttgcaatgtatgaatagatgcaccaacttacattcaatcaatgcaatttcaatacatttctttaaatgcctttgcaattta 19925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 63; Significance: 7e-27; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 371 - 554
Target Start/End: Original strand, 11291 - 11477
Alignment:
Q  371 tttgtataaatagtagttttccctagaaaaa-agggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtc 468  Q
    |||||||||||||||||||||  ||| |||| |||||||||| || ||||||| |||||||||||||||| ||| |||| ||| ||| || ||| |||||    
T  11291 tttgtataaatagtagttttctttaggaaaacagggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaatgagtc 11390  T
Q  469 acaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaattcattt-tttaaatgtctttacaatttac 554  Q
    ||||||||||| |||||||  ||||||| || || |||||||||||  |||||  ||| ||||| ||||||| ||||| ||||||||    
T  11391 acaagttgcaaagtatgaacctgtgtaccaaatttcattcaatcaatgcaattttaatacatttctttaaatatctttgcaatttac 11477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 62; Significance: 3e-26; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 51048 - 50907
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  51048 ctatctgtataaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 50949  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| |||||||||||||||| ||||| ||||    
T  50948 gtcacaagttgcaaagtatgaatatgtgtaccaactttcatt 50907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 46410 - 46269
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  46410 ctatctgtataaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 46311  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| ||||| |||||||||| ||||| ||||    
T  46310 gtcacaagttgcaaagtatgtatatgtgtaccaactttcatt 46269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 367 - 493
Target Start/End: Original strand, 15703 - 15831
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||| |||||||||||||||| | ||| ||||| |||||||||||| |||||||  ||||||||| ||||| |||||||| ||| ||| || |||||    
T  15703 tctatttctataaatagtagtttttcttaggaaaaacgggtcacaaatcaatcatactcaaaacttacactcaatactatccgtatggaagcgacaaacg 15802  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  15803 agtcacaagttgcaaagtatgaatatgtg 15831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 61; Significance: 1e-25; HSPs: 6)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 427 - 554
Target Start/End: Original strand, 116456 - 116584
Alignment:
Q  427 aacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaacacaattcaaat 526  Q
    |||||||||||||| |||| | ||| ||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||| ||||  |||||  |||    
T  116456 aacttacgctcaaaatatctgtatggaagcgatgaacgagtcacaagttgcaatgtatgaatatgtgtaccaacttacattcagtcaatgcaatttcaat 116555  T
Q  527 tcattt-tttaaatgtctttacaatttac 554  Q
     ||||| ||||||||||||| ||||||||    
T  116556 acatttctttaaatgtctttgcaatttac 116584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 6799 - 6672
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaaggg-tcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| |||||||| |||||| || |||||||||||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  6799 ctatttgtataaatagtagtttttcttaggaaaaagggatcacaattcaatcatacaaaaaacttacactcaatactgtccgtatggaagcgacaaacga 6700  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| ||||||| |||||    
T  6699 gtcacaagttgcaaagtatgaacatgtg 6672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 367 - 493
Target Start/End: Original strand, 84994 - 85122
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| || ||||||| ||||| ||| |||| ||| ||| || |||||    
T  84994 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaagaacttacactcaatactgtccgtatggaagcgacaaacg 85093  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  85094 agtcacaagttgcaaagtatgaatatgtg 85122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Original strand, 62133 - 62261
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| | | |||| ||| ||| || |||||    
T  62133 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaagcgacaaacg 62232  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    | ||||||||||||| |||||||||||||    
T  62233 aatcacaagttgcaaagtatgaatatgtg 62261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Original strand, 71311 - 71439
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| | | |||| ||| ||| || |||||    
T  71311 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaagcgacaaacg 71410  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    | ||||||||||||| |||||||||||||    
T  71411 aatcacaagttgcaaagtatgaatatgtg 71439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 368 - 493
Target Start/End: Original strand, 22608 - 22735
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||||||| |||||||||||||| | ||| ||||| |||||| || || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  22608 ctatttgtgtaaatagtagtttttcttaggaaaaacgggtcataattcgatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 22707  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| ||||||| |||||    
T  22708 gtcacaagttgcaaagtatgaacatgtg 22735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 60; Significance: 4e-25; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 8221 - 8094
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  8221 ctatttgtataaatagtagtttttcttagaaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 8122  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| |||||||| ||||    
T  8121 gtcacaagttgcaaagtatgaatttgtg 8094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 15351 - 15224
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  15351 ctatttgtataaatagtagtttttcttagaaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 15252  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| |||||||| ||||    
T  15251 gtcacaagttgcaaagtatgaatttgtg 15224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 151543 - 151416
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaaggg-tcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| |||||||| |||||| || ||||||| |||||||||| ||||| |||||||| ||| ||| || ||||||    
T  151543 ctatttgtataaatagtagtttttcttaggaaaaaggggtcacaattcaatcatactaaaaacttacactcaatactatccgtatggaagcgacaaacga 151444  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| ||||||| |||||    
T  151443 gtcacaagttgcaaagtatgaacatgtg 151416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 369 - 493
Target Start/End: Original strand, 23017 - 23143
Alignment:
Q  369 tatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    |||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||    
T  23017 tatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 23116  T
Q  467 tcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||| |||||||||||||    
T  23117 tcacaagttgcaaagtatgaatatgtg 23143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 373 - 493
Target Start/End: Original strand, 44197 - 44319
Alignment:
Q  373 tgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| | | |||| ||||||| || |||||||||||    
T  44197 tgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaataatgtccgtatgaaagcgacaaacgagtcac 44296  T
Q  471 aagttgcaatgtatgaatatgtg 493  Q
    ||||||||| |||||||| ||||    
T  44297 aagttgcaaagtatgaatctgtg 44319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 368 - 507
Target Start/End: Original strand, 5621 - 5762
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  5621 ctatctgtataaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 5720  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||||| || |||||||||||||||| ||||| ||||    
T  5721 gtcacaagttgtaaagtatgaatatgtgtaccaactttcatt 5762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 8902 - 8774
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| |||||  |||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||    
T  8902 tctatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 8803  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  8802 agtcacaagttgcaaagtatgaatatgtg 8774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 57; Significance: 3e-23; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 373 - 507
Target Start/End: Original strand, 39853 - 39989
Alignment:
Q  373 tgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | ||| |||||  |||||||| || |||||||||||||||||| ||||| ||| |||| ||| ||| || |||||||||||    
T  39853 tgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatacaaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcac 39952  T
Q  471 aagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||| | |||||||||||||||| ||||| ||||    
T  39953 aagttgcgaagtatgaatatgtgtaccaactttcatt 39989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 29484 - 29356
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||| || |||||||  ||||||||| ||||| ||| | || ||||||| || |||||    
T  29484 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttacactcaatactgttcgtatgaaagcgacaaacg 29385  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||| || |||||||||||||    
T  29384 agtcacaagttgaaaagtatgaatatgtg 29356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 28671 - 28530
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaaggg-tcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| |||||||| ||| || || ||||||| |||||||||| | ||| |||  ||| ||| ||| || ||||||    
T  28671 ctatctgtataaatagtagtttttcttaggaaaaaggggtcataattcaatcatactaaaaacttacacacaatactgcccgtatggaagcgacaaacga 28572  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| |||||||||||||||| ||||| ||||    
T  28571 gtcacaagttgcaaagtatgaatatgtgtaccaactttcatt 28530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 368 - 493
Target Start/End: Original strand, 30579 - 30706
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  30579 ctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 30678  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| ||||||| |||||    
T  30679 gtcacaagttgcaaagtatgaacatgtg 30706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 369 - 493
Target Start/End: Complemental strand, 44402 - 44276
Alignment:
Q  369 tatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    ||||||||||||||| |||||| | ||| |||||  |||||||| || |||||||||||||||||| ||||| ||| |||| ||| ||| || |||||||    
T  44402 tatttgtataaataggagtttttcttaggaaaaacaggtcacaattcaatcatacaaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 44303  T
Q  467 tcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||| |||||||||||||    
T  44302 tcacaagttgcaaagtatgaatatgtg 44276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 367 - 507
Target Start/End: Complemental strand, 118510 - 118368
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||| || |||||||  ||||||||| ||||| ||| |||| ||| ||  || |||||    
T  118510 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatacgcaaaacttacactcaatactgtccgtatggaatcgacaaacg 118411  T
Q  465 agtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||||||||| ||||||||||||| || ||||| ||||    
T  118410 agtcacaagttgcaaagtatgaatatgtgcaccaactttcatt 118368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 367 - 507
Target Start/End: Complemental strand, 142360 - 142218
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||   ||||||||| ||||| ||| |||| ||| ||| || |||||    
T  142360 tctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatattcaaaacttacactcaatactgtccgtatggaagcgacaaacg 142261  T
Q  465 agtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    ||||||||||||||| ||||||||||||| || ||||| ||||    
T  142260 agtcacaagttgcaaagtatgaatatgtgcaccaactttcatt 142218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 368 - 507
Target Start/End: Original strand, 4505 - 4646
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| |||||||||||||||||| | ||| |||||| |||||||| || ||||||| |||| ||||| ||||| ||| || | ||| ||| || ||||||    
T  4505 ctatctgtataaatagtagtttttcttaggaaaaagaggtcacaattcaatcatactaaaatcttacactcaatactgtcagtatggaagcgacaaacga 4604  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| |||||||||||||||| ||||| ||||    
T  4605 gtcacaagttgcaaagtatgaatatgtgtaccaactttcatt 4646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 367 - 490
Target Start/End: Original strand, 25069 - 25194
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||||||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| | | || |||||    
T  25069 tctatttgtataaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggatgcgacaaacg 25168  T
Q  465 agtcacaagttgcaatgtatgaatat 490  Q
    ||||||||||||||| ||||||||||    
T  25169 agtcacaagttgcaaagtatgaatat 25194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 368 - 507
Target Start/End: Original strand, 41324 - 41465
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| |||||  |||||||| |  ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||||    
T  41324 ctatttgtataaatagtagtttttcttaggaaaaacaggtcacaatttaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacga 41423  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||| ||||||||||||| || ||||| ||||    
T  41424 gtcacaagttgcaaagtatgaatatgtgcaccaactttcatt 41465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 369 - 496
Target Start/End: Original strand, 58491 - 58620
Alignment:
Q  369 tatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    |||||||||||||||||||||| | ||| |||||  |||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||    
T  58491 tatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgag 58590  T
Q  467 tcacaagttgcaatgtatgaatatgtgtac 496  Q
    ||||||||||||| |||||||| |||||||    
T  58591 tcacaagttgcaaagtatgaatctgtgtac 58620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 6e-21; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 25232 - 25104
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||||||||||||| |||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||    
T  25232 tctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 25133  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||| ||||||||||| |||||||||||||    
T  25132 agtaacaagttgcaaagtatgaatatgtg 25104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 28730 - 28602
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||||||||||||| |||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||    
T  28730 tctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 28631  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||| ||||||||||| |||||||||||||    
T  28630 agtaacaagttgcaaagtatgaatatgtg 28602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 367 - 493
Target Start/End: Original strand, 390070 - 390198
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||| |||||||| ||||||| | ||| ||||| ||||||||| || |||||||  ||||||||| ||||| ||| |||| ||| |||||| |||||    
T  390070 tctatttctataaatattagtttttcttaggaaaaacgggtcacaattcaatcatactcaaaacttacactcaatactgtccgtatggaagagacaaacg 390169  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||||||| |||||||||||||    
T  390170 agtcacaagttgcaaagtatgaatatgtg 390198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 115489 - 115361
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    ||||||||||||||||| |||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || ||||     
T  115489 tctatttgtataaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaaca 115390  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||| |||||||| |||||||||||||    
T  115389 agtcaccagttgcaaagtatgaatatgtg 115361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 130040 - 129913
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||| |||||| | ||| |||||  ||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||| |    
T  130040 tctatttgtataaatagaagtttttcttaggaaaaacagtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacaa 129941  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||| |||||||| |||||||||||||    
T  129940 gtcaccagttgcaaagtatgaatatgtg 129913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 369 - 493
Target Start/End: Original strand, 2422 - 2548
Alignment:
Q  369 tatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgag 466  Q
    ||||||||||||||| |||||| | || |||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||||    
T  2422 tatttgtataaatagaagtttttcttaagaaaaacgggtcacaattcaatcataccaaaaacttaccctcaatactgtccgtatggaagcgacaaacgag 2521  T
Q  467 tcacaagttgcaatgtatgaatatgtg 493  Q
    | ||||||||||| |||||||||||||    
T  2522 ttacaagttgcaaagtatgaatatgtg 2548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 1975 - 2048
Alignment:
Q  76 gtgttagccaatatttttaaaggttatcatttaatgcggtcaaaataggttgaccttatcatcgaagaaattgt 149  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||| ||||||| |||||||||||| ||||||    
T  1975 gtgttagccaatatttttaagggttatcatttaatgcaatcaaaatgggttgactttatcatcgaaggaattgt 2048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 368 - 479
Target Start/End: Original strand, 1721 - 1834
Alignment:
Q  368 ctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | || |||||| ||||||||| || ||||||| ||||||||| |||||| ||| |||| ||| ||| || ||||||    
T  1721 ctatttgtataaatagtagtttttcttaggaaaaatgggtcacaattcaatcatactaaaaacttatgctcaatactgtccgtatggaagcgacaaacga 1820  T
Q  466 gtcacaagttgcaa 479  Q
    ||||||||||||||    
T  1821 gtcacaagttgcaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1496 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 374 - 513
Target Start/End: Original strand, 1396 - 1535
Alignment:
Q  374 gtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    ||||||||||||||||| | || |||||| ||||||||| || |||||||  ||||||||| ||||||||||| ||||    ||||||||||||| ||||    
T  1396 gtataaatagtagtttttcataagaaaaacgggtcacaattcaatcatacggaaaacttacactcaaactatctgcat-tcggagagaaacgagtaacaa 1494  T
Q  473 gttgcaatgtatgaatatgtgtacaaacttacattcaatca 513  Q
    ||   ||||||||||| ||||||| || |||||||||||||    
T  1495 gtcagaatgtatgaatctgtgtaccaatttacattcaatca 1535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 18642 - 18514
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||| |||||| |||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||    
T  18642 tctatttgtagaaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 18543  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||| ||| |||||||||||||    
T  18542 agtcacaagttacaaagtatgaatatgtg 18514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 28173 - 28045
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||| |||||| |||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| ||| ||| || |||||    
T  28173 tctatttgtagaaatagaagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacg 28074  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    ||||||||||| ||| |||||||||||||    
T  28073 agtcacaagttacaaagtatgaatatgtg 28045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 48; Significance: 6e-18; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 1362 - 1235
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| |||||  |||||||| || ||||||| |||||||||| || || ||| |||| ||| ||| || ||||||    
T  1362 ctatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttacactaaatactgtccgtatggaagcgacaaacga 1263  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| ||||||| |||||    
T  1262 gtcacaagttgcaaagtatgaacatgtg 1235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 7790 - 7663
Alignment:
Q  368 ctatttgtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| |||||  |||||||| || ||||||| |||||||||| || || ||| |||| ||| ||| || ||||||    
T  7790 ctatttgtataaatagtagtttttcttaggaaaaacaggtcacaattcaatcatactaaaaacttacactaaatactgtccgtatggaagcgacaaacga 7691  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| ||||||| |||||    
T  7690 gtcacaagttgcaaagtatgaacatgtg 7663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 368 - 493
Target Start/End: Complemental strand, 5922 - 5795
Alignment:
Q  368 ctatttgtataaatagtagttttccctag-aaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||| || ||||||| |||||||||| || ||   | |||| ||| ||| || ||||||    
T  5922 ctatttgtataaatagtagtttttcttaggaaaaaagggtcacaattcaatcatactaaaaacttacacttaattttgtccgtatggaagcgacaaacga 5823  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||||||||||||| |||||||| ||||    
T  5822 gtcacaagttgcaaagtatgaatctgtg 5795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 368 - 493
Target Start/End: Original strand, 32065 - 32192
Alignment:
Q  368 ctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    ||||||||||||||||||||||| | || |||||| ||||||||| || ||||||| |||||||||| ||||| | | |||| ||| ||| || ||||||    
T  32065 ctatttgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaagcgacaaacga 32164  T
Q  466 gtcacaagttgcaatgtatgaatatgtg 493  Q
    |||| ||||||||| ||||||| |||||    
T  32165 gtcaaaagttgcaaagtatgaacatgtg 32192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 368 - 507
Target Start/End: Complemental strand, 15465 - 15324
Alignment:
Q  368 ctatttgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacga 465  Q
    |||| ||||||||||||||||||   || || |||| |||||||| || ||||||| |||||||||||||||| ||| |||| ||| ||| || ||||||    
T  15465 ctatctgtataaatagtagttttttttatgataaaatggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaacga 15366  T
Q  466 gtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    || ||||||||||| |||| ||||||| ||| ||||| ||||    
T  15365 gttacaagttgcaaagtattaatatgtttaccaactttcatt 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 374 - 496
Target Start/End: Complemental strand, 25888 - 25766
Alignment:
Q  374 gtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaa 472  Q
    ||||||||||||||||| | ||| ||||| ||||||||| || |||||||| ||||||||| || ||| |||||||||  | |||||||| |||| ||||    
T  25888 gtataaatagtagtttttcataggaaaaacgggtcacaattcaatcatacagaaaacttacacttaaattatccgcattta-gagagaaatgagtaacaa 25790  T
Q  473 gttgcaatgtatgaatatgtgtac 496  Q
    ||  |||||||||||| |||||||    
T  25789 gtcacaatgtatgaatctgtgtac 25766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 373 - 493
Target Start/End: Complemental strand, 43256 - 43134
Alignment:
Q  373 tgtataaatagtagttttcccta-gaaaaaagggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcac 470  Q
    |||||||||||||||||| | || |||||| ||||||||| || ||||||| ||| |||||| ||||| ||| |||| ||| ||| || ||||||||||     
T  43256 tgtataaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaacacttacactcaatactgtccgtatggaagcgacaaacgagtcat 43157  T
Q  471 aagttgcaatgtatgaatatgtg 493  Q
    ||||||||| |||||||| ||||    
T  43156 aagttgcaaagtatgaatctgtg 43134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 377 - 493
Target Start/End: Original strand, 63772 - 63890
Alignment:
Q  377 taaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacgagtcacaagt 474  Q
    |||||||||||||| | ||| ||||| ||||||||| || ||||||| ||||| |||| || || ||| |||| ||| ||| || |||||||||||||||    
T  63772 taaatagtagtttttcttaggaaaaacgggtcacaattcaatcatactaaaaatttacacttaatactgtccgtatggaagcgacaaacgagtcacaagt 63871  T
Q  475 tgcaatgtatgaatatgtg 493  Q
    ||||| |||||||||||||    
T  63872 tgcaaagtatgaatatgtg 63890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 367 - 493
Target Start/End: Complemental strand, 26920 - 26792
Alignment:
Q  367 tctatttgtataaatagtagttttccctagaaaaaa-gggtcacaaatctatcatacaaaaaacttacgctcaa-actatccgcatgaaagagagaaacg 464  Q
    |||||||||||||||||  ||||| | ||| ||||| ||||||||| || ||||||| |||||||||| ||||| ||| |||| |||   | || |||||    
T  26920 tctatttgtataaataggggtttttcttaggaaaaacgggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggttgcgacaaacg 26821  T
Q  465 agtcacaagttgcaatgtatgaatatgtg 493  Q
    | ||||||||||||| |||||||||||||    
T  26820 attcacaagttgcaaagtatgaatatgtg 26792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 418 - 514
Target Start/End: Complemental strand, 27018 - 26923
Alignment:
Q  418 catacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaatcaa 514  Q
    ||||||||||||||||  |||||||||| ||||  | ||||||||||||| ||||||  || ||||||||||||||||| || |||| |||||||||    
T  27018 catacaaaaaacttacaatcaaactatctgcattta-gagagaaacgagttacaagtcacactgtatgaatatgtgtaccaatttactttcaatcaa 26923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 460 - 507
Target Start/End: Complemental strand, 11321 - 11274
Alignment:
Q  460 aaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacatt 507  Q
    |||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  11321 aaacgagtcacaagttgcaaagtatgaatatgtgtaccaactttcatt 11274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 15132 - 15023
Alignment:
Q  404 ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaactta 503  Q
    |||||||| || | || ||||||||||||| || |||||||||||||  | |||| |||||||| ||||||   ||||||||||| |||||||  | |||    
T  15132 ggtcacaattcaaccagacaaaaaacttacactaaaactatccgcatcta-gagataaacgagttacaagtcaaaatgtatgaatttgtgtaccgattta 15034  T
Q  504 cattcaatcaa 514  Q
    |||||||||||    
T  15033 cattcaatcaa 15023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 511
Target Start/End: Complemental strand, 31362 - 31222
Alignment:
Q  371 tttgtataaatagtagttttccctagaaaaaagg-gtcacaaatctatcatacaaaaaacttacgctcaaactatccgcatgaaagagagaaacgagtca 469  Q
    |||||||||||||||||||| | ||| |||||   |||| |  || |||||||| |||||| || |||||||||||| |||  || ||||||||| || |    
T  31362 tttgtataaatagtagtttttcttaggaaaaacatgtcagagttcaatcatacagaaaactaacactcaaactatccacattcaa-agagaaacgcgtaa 31264  T
Q  470 caagttgcaatgtatgaatatgtgtacaaacttacattcaat 511  Q
    ||| |  |||||||||||| ||||||| || |||||||||||    
T  31263 caaatcacaatgtatgaatctgtgtaccaatttacattcaat 31222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 374 - 449
Target Start/End: Complemental strand, 759 - 683
Alignment:
Q  374 gtataaatagtagttttccctagaaaaaag-ggtcacaaatctatcatacaaaaaacttacgctcaaactatccgca 449  Q
    ||||||||||||||||| | |||  ||||  |||||||| ||  ||||||||||||||||| |||||||||||||||    
T  759 gtataaatagtagtttttcatagggaaaacaggtcacaattcagtcatacaaaaaacttacactcaaactatccgca 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 454 - 511
Target Start/End: Complemental strand, 43726 - 43669
Alignment:
Q  454 agagagaaacgagtcacaagttgcaatgtatgaatatgtgtacaaacttacattcaat 511  Q
    |||||||||||||| ||||||  | |||||||||| ||||||| || |||||||||||    
T  43726 agagagaaacgagtaacaagtctcgatgtatgaatctgtgtaccaatttacattcaat 43669  T

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