View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9736_low_4 (Length: 250)

Name: NF9736_low_4
Description: NF9736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9736_low_4
NF9736_low_4
[»] chr2 (17 HSPs)
chr2 (25-70)||(45416358-45416403)
chr2 (25-67)||(10973019-10973061)
chr2 (25-69)||(18550063-18550107)
chr2 (25-64)||(41178543-41178582)
chr2 (25-64)||(42519522-42519561)
chr2 (25-67)||(5363150-5363192)
chr2 (25-67)||(12620884-12620926)
chr2 (25-67)||(17615493-17615535)
chr2 (25-67)||(31653913-31653955)
chr2 (25-67)||(36219187-36219229)
chr2 (25-67)||(39374576-39374618)
chr2 (25-67)||(43271312-43271354)
chr2 (25-62)||(1229484-1229521)
chr2 (33-77)||(24664453-24664497)
chr2 (33-77)||(36065772-36065816)
chr2 (25-53)||(40855679-40855707)
chr2 (25-77)||(45417261-45417313)
[»] chr8 (22 HSPs)
chr8 (25-64)||(41219501-41219540)
chr8 (25-67)||(19182456-19182498)
chr8 (25-85)||(16356567-16356627)
chr8 (25-64)||(30378025-30378064)
chr8 (25-64)||(44090715-44090754)
chr8 (25-67)||(12617033-12617075)
chr8 (25-67)||(16355895-16355937)
chr8 (25-67)||(27520200-27520242)
chr8 (25-67)||(30378736-30378778)
chr8 (25-67)||(32379387-32379429)
chr8 (25-67)||(32433342-32433384)
chr8 (25-67)||(34050097-34050139)
chr8 (25-67)||(36052473-36052515)
chr8 (25-63)||(40042186-40042224)
chr8 (25-67)||(41220219-41220261)
chr8 (25-67)||(42174677-42174719)
chr8 (26-67)||(14913482-14913523)
chr8 (25-66)||(44089972-44090013)
chr8 (25-65)||(8076883-8076923)
chr8 (33-77)||(10167682-10167726)
chr8 (33-77)||(13155480-13155524)
chr8 (28-64)||(32098643-32098679)
[»] chr5 (20 HSPs)
chr5 (25-84)||(5904897-5904956)
chr5 (25-64)||(20452864-20452903)
chr5 (25-67)||(38983956-38983998)
chr5 (25-64)||(19000818-19000857)
chr5 (25-64)||(39986158-39986197)
chr5 (25-67)||(796432-796474)
chr5 (25-67)||(4035216-4035258)
chr5 (25-67)||(4291197-4291239)
chr5 (25-67)||(6450689-6450731)
chr5 (25-63)||(6656768-6656806)
chr5 (25-67)||(14712132-14712174)
chr5 (25-67)||(18740195-18740237)
chr5 (25-67)||(27189620-27189662)
chr5 (25-63)||(27432691-27432729)
chr5 (26-67)||(8315071-8315112)
chr5 (33-77)||(7201048-7201092)
chr5 (33-77)||(13391236-13391280)
chr5 (33-77)||(14311306-14311350)
chr5 (25-85)||(18740895-18740955)
chr5 (25-65)||(30224933-30224973)
[»] chr4 (40 HSPs)
chr4 (25-64)||(13460568-13460607)
chr4 (25-64)||(52224378-52224417)
chr4 (25-67)||(47875440-47875482)
chr4 (25-64)||(6203005-6203044)
chr4 (25-64)||(10386928-10386967)
chr4 (25-64)||(13464797-13464836)
chr4 (25-64)||(15636753-15636792)
chr4 (25-64)||(23624321-23624360)
chr4 (25-64)||(29441817-29441856)
chr4 (25-64)||(29445470-29445509)
chr4 (25-64)||(31311980-31312019)
chr4 (25-64)||(42931386-42931425)
chr4 (25-64)||(47500442-47500481)
chr4 (25-67)||(4553207-4553249)
chr4 (25-67)||(4553925-4553967)
chr4 (25-63)||(5807053-5807091)
chr4 (25-67)||(11455614-11455656)
chr4 (25-67)||(11997279-11997321)
chr4 (25-67)||(15637471-15637513)
chr4 (25-67)||(22516215-22516257)
chr4 (25-67)||(28541411-28541453)
chr4 (25-67)||(28756872-28756914)
chr4 (25-67)||(29446188-29446230)
chr4 (25-67)||(29520517-29520559)
chr4 (25-67)||(31312698-31312740)
chr4 (25-67)||(34679839-34679881)
chr4 (25-67)||(39270311-39270353)
chr4 (25-67)||(39651922-39651964)
chr4 (25-67)||(50642111-50642153)
chr4 (25-67)||(53237482-53237524)
chr4 (25-67)||(55935524-55935566)
chr4 (25-66)||(11152848-11152889)
chr4 (33-77)||(3060410-3060454)
chr4 (33-77)||(8562826-8562870)
chr4 (25-65)||(8950167-8950207)
chr4 (33-77)||(23257020-23257064)
chr4 (33-77)||(27704681-27704725)
chr4 (33-69)||(32319559-32319595)
chr4 (25-65)||(42642553-42642593)
chr4 (25-77)||(52822867-52822919)
[»] chr7 (8 HSPs)
chr7 (25-67)||(24424502-24424544)
chr7 (25-67)||(28643036-28643078)
chr7 (25-64)||(45986416-45986455)
chr7 (25-67)||(7573677-7573719)
chr7 (25-67)||(9900053-9900095)
chr7 (25-67)||(30740175-30740217)
chr7 (25-70)||(23140864-23140909)
chr7 (25-53)||(5950763-5950791)
[»] chr3 (26 HSPs)
chr3 (25-67)||(31269095-31269137)
chr3 (25-67)||(50361901-50361943)
chr3 (25-67)||(51367964-51368006)
chr3 (26-67)||(52716989-52717030)
chr3 (25-64)||(1486782-1486821)
chr3 (25-64)||(7588087-7588126)
chr3 (25-67)||(868957-868999)
chr3 (25-67)||(3077885-3077927)
chr3 (25-67)||(4735296-4735338)
chr3 (25-67)||(10182781-10182823)
chr3 (25-67)||(16128043-16128085)
chr3 (25-67)||(16644136-16644178)
chr3 (25-67)||(17639476-17639518)
chr3 (25-67)||(24342897-24342939)
chr3 (25-67)||(36777380-36777422)
chr3 (25-67)||(37125494-37125536)
chr3 (25-67)||(43128234-43128276)
chr3 (25-67)||(43659923-43659965)
chr3 (25-67)||(48586422-48586464)
chr3 (25-67)||(53628499-53628541)
chr3 (25-67)||(55006706-55006748)
chr3 (25-66)||(8338867-8338908)
chr3 (26-67)||(29166546-29166587)
chr3 (33-77)||(11935838-11935882)
chr3 (25-65)||(50143676-50143716)
chr3 (25-77)||(53947779-53947831)
[»] chr1 (35 HSPs)
chr1 (25-67)||(14422084-14422126)
chr1 (25-67)||(45195007-45195049)
chr1 (25-67)||(45336966-45337008)
chr1 (25-67)||(48624488-48624530)
chr1 (25-65)||(10382593-10382633)
chr1 (25-69)||(14421582-14421626)
chr1 (25-65)||(31266469-31266509)
chr1 (25-64)||(26451015-26451054)
chr1 (25-64)||(26911395-26911434)
chr1 (25-95)||(50934230-50934300)
chr1 (25-67)||(4008314-4008356)
chr1 (25-67)||(4058355-4058397)
chr1 (25-67)||(4829128-4829170)
chr1 (25-95)||(6331901-6331971)
chr1 (25-67)||(10371089-10371131)
chr1 (25-67)||(10372264-10372306)
chr1 (25-67)||(10658122-10658164)
chr1 (25-67)||(14007261-14007303)
chr1 (25-67)||(14411452-14411494)
chr1 (25-67)||(15357837-15357879)
chr1 (25-63)||(17964672-17964710)
chr1 (25-67)||(26910670-26910712)
chr1 (25-67)||(32036766-32036808)
chr1 (25-67)||(36449016-36449058)
chr1 (25-67)||(36796585-36796627)
chr1 (25-67)||(47208813-47208855)
chr1 (25-67)||(47632158-47632200)
chr1 (25-67)||(48467735-48467777)
chr1 (25-67)||(48724077-48724119)
chr1 (25-67)||(52761344-52761386)
chr1 (26-67)||(4573580-4573621)
chr1 (25-65)||(2207106-2207146)
chr1 (33-77)||(26674767-26674811)
chr1 (25-65)||(45583088-45583128)
chr1 (33-77)||(52752377-52752421)
[»] scaffold0618 (1 HSPs)
scaffold0618 (25-64)||(9156-9195)
[»] chr6 (13 HSPs)
chr6 (25-64)||(16270120-16270159)
chr6 (25-67)||(13400827-13400869)
chr6 (25-67)||(19417239-19417281)
chr6 (25-67)||(19692664-19692706)
chr6 (25-67)||(22006655-22006697)
chr6 (25-67)||(30753293-30753335)
chr6 (25-67)||(31280209-31280251)
chr6 (25-67)||(34379273-34379315)
chr6 (33-77)||(1131032-1131076)
chr6 (33-77)||(7621124-7621168)
chr6 (33-77)||(10117937-10117981)
chr6 (25-65)||(15054461-15054501)
chr6 (33-77)||(16539433-16539477)
[»] scaffold1157 (1 HSPs)
scaffold1157 (25-67)||(2302-2344)
[»] scaffold0087 (4 HSPs)
scaffold0087 (26-67)||(161-202)
scaffold0087 (26-67)||(5000-5041)
scaffold0087 (26-67)||(15050-15091)
scaffold0087 (26-67)||(22115-22156)
[»] scaffold0115 (1 HSPs)
scaffold0115 (33-77)||(42913-42957)
[»] scaffold0009 (1 HSPs)
scaffold0009 (33-77)||(262811-262855)


Alignment Details
Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 45416358 - 45416403
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtcaa 70  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  45416358 ataaaaagaaatcacactttttagtccctctaaaattttctgtcaa 45416403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 10973061 - 10973019
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  10973061 ataaaaataaatcacactttttagtccttacaaaattttctgt 10973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 18550107 - 18550063
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtca 69  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||    
T  18550107 ataaaaataaatcacactttttagtccctacaaaattttctgtca 18550063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 41178543 - 41178582
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  41178543 ataaaaataaatcacactttttagtccttacaaaattttc 41178582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 42519522 - 42519561
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  42519522 ataaaaataaatcacactttttagtccttacaaaattttc 42519561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 5363150 - 5363192
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  5363150 ataaaaataaatcacactttttagtccatacaaaattttctgt 5363192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 12620926 - 12620884
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  12620926 ataaaaataaatcacactttttagtccctacaaaattttctgt 12620884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 17615535 - 17615493
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  17615535 ataaaaataaatcacactttttagtccctacaaaattttctgt 17615493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 31653955 - 31653913
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  31653955 ataaaaataaatcacactttttagtccatacaaaattttctgt 31653913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 36219229 - 36219187
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36219229 ataaaaataaatcacactttttagtccctacaaaattttctgt 36219187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 39374576 - 39374618
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  39374576 ataaaaataaatcacactttttagtccctacaaaattttctgt 39374618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 43271354 - 43271312
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  43271354 ataaaaataaatcacactttttagtccctacaaaattttctgt 43271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 1229484 - 1229521
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattt 62  Q
    |||||||||||||||||||||||||||||  |||||||    
T  1229484 ataaaaataaatcacactttttagtccttacaaaattt 1229521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 24664497 - 24664453
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  24664497 aaatcacactttttagtccttataaaattttccatcaacattttt 24664453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 36065772 - 36065816
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  36065772 aaatcacactttttagtccttataaaattttccatcaaaattttt 36065816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 40855707 - 40855679
Alignment:
Q  25 ataaaaataaatcacactttttagtcctt 53  Q
    |||||||||||||||||||||||||||||    
T  40855707 ataaaaataaatcacactttttagtcctt 40855679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 45417313 - 45417261
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||| ||||||||||||||| ||| ||||||| ||| ||||||| |||||    
T  45417313 ataaaaagaaatcacactttttaatccctctaaaaatttttgtcaaggttttt 45417261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 41219501 - 41219540
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  41219501 ataaaaataaatcacactttttagtccttataaaattttc 41219540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 19182456 - 19182498
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  19182456 ataaaaataaatcacactttttagtccctataaaattttctgt 19182498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 16356627 - 16356567
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagatttttgatccctg 85  Q
    |||||||||||||||||||||||||||||  ||||||||| || |  ||||||| ||||||    
T  16356627 ataaaaataaatcacactttttagtccttacaaaattttccgttagtatttttggtccctg 16356567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 30378025 - 30378064
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  30378025 ataaaaataaatcacactttttagtccctataaaattttc 30378064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 44090754 - 44090715
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  44090754 ataaaaataaatcacactttttagtccctataaaattttc 44090715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 12617075 - 12617033
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||| |||||| ||||| |||||||||||||    
T  12617075 ataaaaataaatcacattttttaatccttataaaattttctgt 12617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 16355895 - 16355937
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  16355895 ataaaaataaatcacactttttagtccctacaaaattttctgt 16355937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 27520242 - 27520200
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  27520242 ataaaaataaatcacactttttagtccctacaaaattttctgt 27520200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 30378778 - 30378736
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  30378778 ataaaaataaatcacactttttagtccctacaaaattttctgt 30378736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 32379429 - 32379387
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||| ||||||||||||  ||||||||||||    
T  32379429 ataaaaataaatcacagtttttagtccttacaaaattttctgt 32379387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 32433384 - 32433342
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||| ||||||||||||  ||||||||||||    
T  32433384 ataaaaataaatcacagtttttagtccttacaaaattttctgt 32433342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 34050097 - 34050139
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  34050097 ataaaaataaatcacactttttagtccctacaaaattttctgt 34050139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 36052515 - 36052473
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36052515 ataaaaataaatcacactttttagtccctacaaaattttctgt 36052473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 40042224 - 40042186
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaatttt 63  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  40042224 ataaaaataaatcacactttttagtccatataaaatttt 40042186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 41220261 - 41220219
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  41220261 ataaaaataaatcacactttttagtccctacaaaattttctgt 41220219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 42174719 - 42174677
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  42174719 ataaaaataaatcacactttttagtccctacaaaattttctgt 42174677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 14913482 - 14913523
Alignment:
Q  26 taaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||| |||||||||||||||||||| | |||||||||||||    
T  14913482 taaaattaaatcacactttttagtccctataaaattttctgt 14913523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 44089972 - 44090013
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctg 66  Q
    |||||||||||||| |||||||||||| | ||||||||||||    
T  44089972 ataaaaataaatcatactttttagtccctataaaattttctg 44090013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 8076923 - 8076883
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  8076923 ataaaaataaatcacactttttagtccctacaaaattttct 8076883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 10167726 - 10167682
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  10167726 aaatcacactttttagtccttataaaattttccatcaacattttt 10167682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 13155480 - 13155524
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  13155480 aaatcacactttttagtccttataaaattttccatcaacattttt 13155524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 32098643 - 32098679
Alignment:
Q  28 aaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||  |||||||||    
T  32098643 aaaataaatcacactttttagtccttacaaaattttc 32098679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 5904897 - 5904956
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagatttttgatccct 84  Q
    |||||||||||||||||||||||||||||  ||||||||| || || |||||| ||||||    
T  5904897 ataaaaataaatcacactttttagtccttacaaaattttccgttaatatttttaatccct 5904956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 20452864 - 20452903
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  20452864 ataaaaataaatcacactttttagtccttataaaattttc 20452903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 38983998 - 38983956
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  38983998 ataaaaataaatcacactttttagtccttaaaaaattttctgt 38983956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 19000857 - 19000818
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  19000857 ataaaaataaatcacactttttagtccctataaaattttc 19000818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 39986197 - 39986158
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  39986197 ataaaaataaatcacactttttagtccctataaaattttc 39986158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 796474 - 796432
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  796474 ataaaaataaatcacactttttagtccctacaaaattttctgt 796432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 4035258 - 4035216
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4035258 ataaaaataaatcacactttttagtccctacaaaattttctgt 4035216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 4291197 - 4291239
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4291197 ataaaaataaatcacactttttagtccctacaaaattttctgt 4291239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 6450731 - 6450689
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  6450731 ataaaaataaatcacactttttagtccctacaaaattttctgt 6450689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 6656806 - 6656768
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaatttt 63  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  6656806 ataaaaataaatcacactttttagtccctataaaatttt 6656768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 14712174 - 14712132
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  14712174 ataaaaataaatcacactttttagtccctacaaaattttctgt 14712132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 18740195 - 18740237
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  18740195 ataaaaataaatcacactttttagtccctacaaaattttctgt 18740237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 27189662 - 27189620
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  27189662 ataaaaataaatcacactttttagtccctacaaaattttctgt 27189620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 27432729 - 27432691
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaatttt 63  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  27432729 ataaaaataaatcacactttttagtccttacaaaatttt 27432691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 8315071 - 8315112
Alignment:
Q  26 taaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  8315071 taaaaataaatcacactttttagtccgtacaaaattttctgt 8315112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 7201092 - 7201048
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  7201092 aaatcacactttttagtccttataaaattttccatcaacattttt 7201048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 13391236 - 13391280
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    |||||||| |||||||||| | |||||||||||||||| ||||||    
T  13391236 aaatcacattttttagtccctataaaattttctgtcaatattttt 13391280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 14311350 - 14311306
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  14311350 aaatcacactttttagtccttataaaattttccatcaacattttt 14311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 18740955 - 18740895
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagatttttgatccctg 85  Q
    ||||||||||||||||||||||||||| |  ||||||||| || ||  ||||| |||||||    
T  18740955 ataaaaataaatcacactttttagtccctacaaaattttccgttaatgtttttaatccctg 18740895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 30224933 - 30224973
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  30224933 ataaaaataaatcacactttttagtccctacaaaattttct 30224973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 13460568 - 13460607
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  13460568 ataaaaataaatcacactttttagtccttataaaattttc 13460607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 52224378 - 52224417
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  52224378 ataaaaataaatcacactttttagtccttataaaattttc 52224417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 47875440 - 47875482
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  47875440 ataaaaataaatcacactttttagtccttacaaaattttctgt 47875482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 6203005 - 6203044
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  6203005 ataaaaataaatcacactttttagtccttgcaaaattttc 6203044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 10386967 - 10386928
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  10386967 ataaaaataaatcacactttttagtccctataaaattttc 10386928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 13464836 - 13464797
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  13464836 ataaaaataaatcacactttttagtccctataaaattttc 13464797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 15636753 - 15636792
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  15636753 ataaaaataaatcacactttttagtccttacaaaattttc 15636792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 23624321 - 23624360
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  23624321 ataaaaataaatcacactttttagtccttacaaaattttc 23624360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 29441817 - 29441856
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  29441817 ataaaaataaatcacactttttagtccttacaaaattttc 29441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 29445470 - 29445509
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  29445470 ataaaaataaatcacactttttagtccttacaaaattttc 29445509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 31311980 - 31312019
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  31311980 ataaaaataaatcacactttttagtccctataaaattttc 31312019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 42931425 - 42931386
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  42931425 ataaaaataaatcacactttttagtccctataaaattttc 42931386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 47500481 - 47500442
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  47500481 ataaaaataaatcacactttttagtccctataaaattttc 47500442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 4553207 - 4553249
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4553207 ataaaaataaatcacactttttagtccctagaaaattttctgt 4553249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 4553967 - 4553925
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4553967 ataaaaataaatcacactttttagtccatacaaaattttctgt 4553925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 5807053 - 5807091
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaatttt 63  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  5807053 ataaaaataaatcacactttttagtccttacaaaatttt 5807091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 11455656 - 11455614
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  11455656 ataaaaataaatcacactttttagtccctacaaaattttctgt 11455614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 11997321 - 11997279
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  11997321 ataaaaataaatcacactttttagtccctacaaaattttctgt 11997279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 15637513 - 15637471
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  15637513 ataaaaataaatcacactttttagtccctacaaaattttctgt 15637471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 22516257 - 22516215
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  22516257 ataaaaataaatcacactttttagtccctacaaaattttctgt 22516215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 28541453 - 28541411
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  28541453 ataaaaataaatcacactttttagtccctataaatttttctgt 28541411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 28756914 - 28756872
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  28756914 ataaaaataaatcacactttttagtccctacaaaattttctgt 28756872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 29446230 - 29446188
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  29446230 ataaaaataaatcacactttttagtccctacaaaattttctgt 29446188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 29520517 - 29520559
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  29520517 ataaaaataaatcacactttttagtccctacaaaattttctgt 29520559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 31312740 - 31312698
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  31312740 ataaaaataaatcacactttttagtccctacaaaattttctgt 31312698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 34679839 - 34679881
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  34679839 ataaaaataaatcacactttttagtccctacaaaattttctgt 34679881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 39270353 - 39270311
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  39270353 ataaaaataaatcacactttttagtccctacaaaattttctgt 39270311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 39651964 - 39651922
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  39651964 ataaaaataaatcacactttttagtccctacaaaattttctgt 39651922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 50642111 - 50642153
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  50642111 ataaaaataaatcacactttttagtccctacaaaattttctgt 50642153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 53237482 - 53237524
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  53237482 ataaaaataaatcacactttttagtccctacaaaattttctgt 53237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 55935566 - 55935524
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  55935566 ataaaaataaatcacactttttagtccctacaaaattttctgt 55935524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 11152889 - 11152848
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctg 66  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  11152889 ataaaaataaatcacactttttagtccctacaaaattttctg 11152848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 3060410 - 3060454
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  3060410 aaatcacactttttagtccttataaaattttccatcaacattttt 3060454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 8562870 - 8562826
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  8562870 aaatcacactttttagtccttataaaattttccatcaaaattttt 8562826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 8950207 - 8950167
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  8950207 ataaaaataaatcacactttttagtccctacaaaattttct 8950167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 23257020 - 23257064
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  23257020 aaatcacactttttagtccttataaaattttccatcaacattttt 23257064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 27704725 - 27704681
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  27704725 aaatcacactttttagtccttataaaattttccatcaacattttt 27704681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 32319559 - 32319595
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtca 69  Q
    ||||||||||||||||||| | |||||||||||||||    
T  32319559 aaatcacactttttagtccctataaaattttctgtca 32319595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 42642553 - 42642593
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  42642553 ataaaaataaatcacactttttagtccctacaaaattttct 42642593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 52822867 - 52822919
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||||||||| |  ||| |||||||| || ||||||    
T  52822867 ataaaaataaatcacactttttagtccctaaaaatttttctgttaatattttt 52822919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 24424544 - 24424502
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  24424544 ataaaaataaatcacactttttagtccctataaaattttctgt 24424502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 28643078 - 28643036
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  28643078 ataaaaataaatcacactttttagtccctataaaattttctgt 28643036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 45986455 - 45986416
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  45986455 ataaaaataaatcacactttttagtccttacaaaattttc 45986416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 7573719 - 7573677
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  7573719 ataaaaataaatcacactttttagtccctacaaaattttctgt 7573677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 9900053 - 9900095
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  9900053 ataaaaataaatcacactttttagtccctacaaaattttctgt 9900095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 30740175 - 30740217
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  30740175 ataaaaataaatcacactttttagtccctacaaaattttctgt 30740217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 23140864 - 23140909
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtcaa 70  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  23140864 ataaaaagaaatcacactttttaatctctctaaaattttctgtcaa 23140909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 53
Target Start/End: Original strand, 5950763 - 5950791
Alignment:
Q  25 ataaaaataaatcacactttttagtcctt 53  Q
    |||||||||||||||||||||||||||||    
T  5950763 ataaaaataaatcacactttttagtcctt 5950791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 31269095 - 31269137
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  31269095 ataaaaataaatcacactttttagtccttacaaaattttctgt 31269137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 50361901 - 50361943
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  50361901 ataaaaataaatcacactttttagtccttacaaaattttctgt 50361943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 51367964 - 51368006
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  51367964 ataaaaataaatcacattttttagtccttataaaattttctgt 51368006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 52717030 - 52716989
Alignment:
Q  26 taaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  52717030 taaaattaaatcacactttttagtccttataaaattttctgt 52716989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 1486782 - 1486821
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  1486782 ataaaaataaatcacactttttagtccctataaaattttc 1486821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 7588126 - 7588087
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  7588126 ataaaaataaatcacactttttagtccttacaaaattttc 7588087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 868957 - 868999
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  868957 ataaaaataaatcacactttttagtccctacaaaattttctgt 868999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 3077885 - 3077927
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  3077885 ataaaaataaatcacactttttagtccctacaaaattttctgt 3077927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 4735296 - 4735338
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4735296 ataaaaataaatcacactttttagtccctgcaaaattttctgt 4735338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 10182823 - 10182781
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  10182823 ataaaaataaatcacactttttagtccctacaaaattttctgt 10182781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 16128043 - 16128085
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  16128043 ataaaaataaatcacactttttagtccctacaaaattttctgt 16128085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 16644136 - 16644178
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  16644136 ataaaaataaatcacactttttagtccctacaaaattttctgt 16644178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 17639476 - 17639518
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  17639476 ataaaaataaatcacactttttagtccctacaaaattttctgt 17639518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 24342939 - 24342897
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  24342939 ataaaaataaatcacactttttagtccctacaaaattttctgt 24342897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 36777380 - 36777422
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36777380 ataaaaataaatcacactttttagtccctacaaaattttctgt 36777422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 37125494 - 37125536
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  37125494 ataaaaataaatcacactttttagtccctacaaaattttctgt 37125536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 43128276 - 43128234
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||| ||||||||||||||||  ||||||||||||    
T  43128276 ataaaaataaattacactttttagtccttacaaaattttctgt 43128234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 43659923 - 43659965
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  43659923 ataaaaataaatcacactttttagtccctacaaaattttctgt 43659965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 48586464 - 48586422
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  48586464 ataaaaataaatcacactttttagtccctacaaaattttctgt 48586422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 53628499 - 53628541
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  53628499 ataaaaataaatcacactttttagtccctacaaaattttctgt 53628541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 55006748 - 55006706
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  55006748 ataaaaataaatcacactttttagtccctacaaaattttctgt 55006706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 8338867 - 8338908
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctg 66  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  8338867 ataaaaataaatcacactttttagtccctacaaaattttctg 8338908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 29166546 - 29166587
Alignment:
Q  26 taaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  29166546 taaaaataaatcacactttttagtccctacaaaattttctgt 29166587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 11935838 - 11935882
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  11935838 aaatcacactttttagtccttataaaattttccatcaacattttt 11935882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 50143716 - 50143676
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  50143716 ataaaaataaatcacactttttagtccctacaaaattttct 50143676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 53947831 - 53947779
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||||||||  |  |||||||||||| || ||||||    
T  53947831 ataaaaataaatcacactttttagtctctacaaaattttctgttaatattttt 53947779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 14422126 - 14422084
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  14422126 ataaaaataaatcacactttttagtccttacaaaattttctgt 14422084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 45195049 - 45195007
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  45195049 ataaaaataaatcacactttttagtccttacaaaattttctgt 45195007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 45337008 - 45336966
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  45337008 ataaaaataaatcacactttttagtccttacaaaattttctgt 45336966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 48624530 - 48624488
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  48624530 ataaaaataaatcacactttttagtccctataaaattttctgt 48624488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 10382593 - 10382633
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  10382593 ataaaaataaatcacactttttagtccctataaaattttct 10382633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 14421582 - 14421626
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtca 69  Q
    |||||||||||| | |||||||||||||| |||||||||||||||    
T  14421582 ataaaaataaattagactttttagtccttataaaattttctgtca 14421626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 31266469 - 31266509
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  31266469 ataaaaataaatcacactttttagtccctataaaattttct 31266509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 26451015 - 26451054
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  26451015 ataaaaataaatcacactttttagtccctataaaattttc 26451054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 26911434 - 26911395
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  26911434 ataaaaataaatcacactttttagtccctataaaattttc 26911395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 50934230 - 50934300
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtca-agatttttgatccctgctcttaagtg 95  Q
    |||||||||||||||| |||||||||| | ||||||||||||| | ||||||| | |||||||| |||||||    
T  50934230 ataaaaataaatcacattttttagtccctataaaattttctgttatagattttag-tccctgctgttaagtg 50934300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 4008314 - 4008356
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4008314 ataaaaataaatcacactttttagtccctacaaaattttctgt 4008356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 4058397 - 4058355
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  4058397 ataaaaataaatcacactttttagtccctacaaaattttctgt 4058355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 4829128 - 4829170
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  4829128 ataaaaataaatcacactttttagcccctataaaattttctgt 4829170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 6331971 - 6331901
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgtcaagatttttgatccctgctcttaagtg 95  Q
    |||||||||||||||||||| |||||| | ||||||||| ||||||  |||||  ||| |||| |||||||    
T  6331971 ataaaaataaatcacactttctagtccatataaaattttttgtcaaagtttttagtccttgctgttaagtg 6331901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 10371089 - 10371131
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  10371089 ataaaaataaatcacactttttagtccctataaatttttctgt 10371131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 10372264 - 10372306
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  10372264 ataaaaataaatcacactttttagtccctacaaaattttctgt 10372306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 10658122 - 10658164
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  10658122 ataaaaataaatcacactttttagtccctacaaaattttctgt 10658164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 14007303 - 14007261
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  14007303 ataaaaataaatcacactttttagtccctacaaaattttctgt 14007261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 14411494 - 14411452
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  14411494 ataaaaataaatcacactttttagtccctacaaaattttctgt 14411452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 15357837 - 15357879
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  15357837 ataaaaataaatcacactttttagtccctacaaaattttctgt 15357879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 17964710 - 17964672
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaatttt 63  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  17964710 ataaaaataaatcacactttttagtccctataaaatttt 17964672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 26910670 - 26910712
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  26910670 ataaaaataaatcacactttttagtccctacaaaattttctgt 26910712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 32036766 - 32036808
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  32036766 ataaaaataaatcacactttttagtccctacaaaattttctgt 32036808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 36449016 - 36449058
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36449016 ataaaaataaatcacactttttagtccctacaaaattttctgt 36449058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 36796627 - 36796585
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  36796627 ataaaaataaatcacactttttagtccctacaaaattttctgt 36796585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 47208813 - 47208855
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||| |||||  ||||||||||||    
T  47208813 ataaaaataaatcacactttttaatccttacaaaattttctgt 47208855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 47632158 - 47632200
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  47632158 ataaaaataaatcacactttttagtccctacaaaattttctgt 47632200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 48467735 - 48467777
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  48467735 ataaaaataaatcacactttttagtccctacaaaattttctgt 48467777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 48724119 - 48724077
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  48724119 ataaaaataaatcacactttttagtccctacaaaattttctgt 48724077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 52761386 - 52761344
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  52761386 ataaaaataaatcacactttttagtccctacaaaattttctgt 52761344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 4573580 - 4573621
Alignment:
Q  26 taaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  4573580 taaaaataaatcacactttttagtccctacaaaattttctgt 4573621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 2207106 - 2207146
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  2207106 ataaaaataaatcacactttttagtccctacaaaattttct 2207146  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 26674811 - 26674767
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  26674811 aaatcacactttttagtccttataaaattttccatcaacattttt 26674767  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 45583088 - 45583128
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    |||||||||||||||| |||||||||| | |||||||||||    
T  45583088 ataaaaataaatcacattttttagtccctataaaattttct 45583128  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 52752421 - 52752377
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  52752421 aaatcacactttttagtccttataaaattttccatcaatattttt 52752377  T

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Target: scaffold0618 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 9156 - 9195
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  9156 ataaaaataaatcacactttttagtccctataaaattttc 9195  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 16270120 - 16270159
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttc 64  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  16270120 ataaaaataaatcacactttttagtccttacaaaattttc 16270159  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 13400869 - 13400827
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  13400869 ataaaaataaatcacactttttagtccctacaaaattttctgt 13400827  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 19417281 - 19417239
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  19417281 ataaaaataaatcacactttttagtccctacaaaattttctgt 19417239  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 19692664 - 19692706
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  19692664 ataaaaataaatcacactttttagtccctacaaaattttctgt 19692706  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 22006655 - 22006697
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  22006655 ataaaaataaatcacactttttagtccctacaaaattttctgt 22006697  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 30753293 - 30753335
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  30753293 ataaaaataaatcacactttttagtccctacaaaattttctgt 30753335  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 31280251 - 31280209
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||| |||  ||||||||||||    
T  31280251 ataaaaataaatcacactttttagtgcttacaaaattttctgt 31280209  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 34379315 - 34379273
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  34379315 ataaaaataaatcacactttttagtccctacaaaattttctgt 34379273  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 1131032 - 1131076
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  1131032 aaatcacactttttagtccttataaaattttccatcaacattttt 1131076  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 7621168 - 7621124
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  7621168 aaatcacactttttagtccttataaaattttccatcaacattttt 7621124  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 10117937 - 10117981
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||| ||||||||||||||| |||||||||| ||||| ||||||    
T  10117937 aaatcgcactttttagtccttgtaaaattttccgtcaacattttt 10117981  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 15054501 - 15054461
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttct 65  Q
    ||||||||||||||||||||||||||| |  ||||||||||    
T  15054501 ataaaaataaatcacactttttagtccctacaaaattttct 15054461  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 16539477 - 16539433
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  16539477 aaatcacactttttagtccttataaaattttccatcaacattttt 16539433  T

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Target: scaffold1157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 2302 - 2344
Alignment:
Q  25 ataaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  2302 ataaaaataaatcacactttttagtccctacaaaattttctgt 2344  T

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Target: scaffold0087 (Bit Score: 30; Significance: 0.00000008; HSPs: 4)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 161 - 202
Alignment:
Q  26 taaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||| ||||||||||||||  ||||||||||||    
T  161 taaaaataaatcatactttttagtccttacaaaattttctgt 202  T

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Target: scaffold0087; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 5000 - 5041
Alignment:
Q  26 taaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  5000 taaaaataaatcacactttttagtccctacaaaattttctgt 5041  T

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Target: scaffold0087; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 15050 - 15091
Alignment:
Q  26 taaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    ||||||||||||| ||||||||||||||  ||||||||||||    
T  15050 taaaaataaatcatactttttagtccttacaaaattttctgt 15091  T

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Target: scaffold0087; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 22115 - 22156
Alignment:
Q  26 taaaaataaatcacactttttagtccttctaaaattttctgt 67  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  22115 taaaaataaatcacactttttagtccctacaaaattttctgt 22156  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 42913 - 42957
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  42913 aaatcacactttttagtccttataaaattttccatcaacattttt 42957  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 262855 - 262811
Alignment:
Q  33 aaatcacactttttagtccttctaaaattttctgtcaagattttt 77  Q
    ||||||||||||||||||||| ||||||||||  |||| ||||||    
T  262855 aaatcacactttttagtccttataaaattttccatcaacattttt 262811  T

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