View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9737_high_16 (Length: 333)
Name: NF9737_high_16
Description: NF9737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9737_high_16 |
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Alignment Details
Target: chr6 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 5035702 - 5035371
Alignment:
| Q |
1 |
tcctgttctttagggaataatcaaatgattttgacatgtccatgctggtggatggagtaccactagactatagcattttttaatctcttttgcaaaagca |
100 |
Q |
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| T |
5035702 |
tccttttctttagggaataatcaaatgattttgacatttccatgctggtggatggagtaccactagactatagcattttttaatctcttttgcaaaagca |
5035603 |
T |
|
| Q |
101 |
tattctacttcaaacctattttaacatatttaatttattgacaaaaatattgtaagtgttgcattgacttgagatgaagtgttaatggaacattgtgcaa |
200 |
Q |
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| T |
5035602 |
tattctacttcaaacctattttaacatatttaatttattgacaaaaatattgtaagtgttgcattgacttgagatgaagtgttaatggaacattgtgcaa |
5035503 |
T |
|
| Q |
201 |
gaacttaaatgctattttagttgattgattctctggtttttgatttcttgttaagttcgactttgattataaacattttataagtgagagaatccacaaa |
300 |
Q |
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||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5035502 |
gaacttaggtgctattttagttgattgattatctggtttttgattttttgttaagttcgactttgattataaacattttataagtgagagaatccacaaa |
5035403 |
T |
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| Q |
301 |
tataatattttaagtttttggataaagatgtg |
332 |
Q |
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|| ||||||||||||||||||||||||||||| |
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| T |
5035402 |
tacaatattttaagtttttggataaagatgtg |
5035371 |
T |
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