View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9737_low_11 (Length: 397)

Name: NF9737_low_11
Description: NF9737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9737_low_11
NF9737_low_11
[»] chr3 (6 HSPs)
chr3 (1-379)||(19647074-19647452)
chr3 (2-157)||(3170134-3170292)
chr3 (22-157)||(27547227-27547361)
chr3 (37-143)||(21587185-21587291)
chr3 (7-79)||(44126751-44126824)
chr3 (22-77)||(13100788-13100844)
[»] chr2 (5 HSPs)
chr2 (159-379)||(18772943-18773163)
chr2 (8-79)||(21294925-21294997)
chr2 (40-128)||(17830753-17830842)
chr2 (7-138)||(25232017-25232148)
chr2 (8-79)||(21289627-21289699)
[»] chr7 (2 HSPs)
chr7 (4-157)||(23818710-23818863)
chr7 (54-143)||(22477038-22477127)
[»] chr8 (3 HSPs)
chr8 (22-142)||(28350603-28350724)
chr8 (2-61)||(29185553-29185612)
chr8 (4-60)||(17703045-17703101)
[»] chr5 (6 HSPs)
chr5 (22-142)||(25214454-25214575)
chr5 (22-142)||(25278604-25278725)
chr5 (3-157)||(24213307-24213461)
chr5 (3-79)||(24228300-24228377)
chr5 (22-128)||(12026314-12026420)
chr5 (7-102)||(7823115-7823210)
[»] chr6 (1 HSPs)
chr6 (3-79)||(19441157-19441234)
[»] chr1 (3 HSPs)
chr1 (3-79)||(11444049-11444126)
chr1 (12-138)||(29547774-29547900)
chr1 (12-79)||(29530177-29530245)


Alignment Details
Target: chr3 (Bit Score: 371; Significance: 0; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 1 - 379
Target Start/End: Complemental strand, 19647452 - 19647074
Alignment:
Q  1 tcattacttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaatagtaagtgaatgatcaaatgaaattaaacatcactaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19647452 tcattacttcacaagtgtgtcctttacattacaacttgagttctatttataggatacaaatagtaagtgaatgatcaaatgaaattaaacatcactaaca 19647353  T
Q  101 atccattcagtaatgggagttataagaacgtggaagatcaaggttatggacatccacgtacaataatcgatttctagcttctataggaacaaacacatct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19647352 atccattcagtaatgggagttataagaacgtggaagatcaaggttatggacatccacgtacaataatcgatttctagcttctataggaacaaacacatct 19647253  T
Q  201 atccttggtaaactgatttagtatacaactcccaaaaccttctttataagtgccagcacactttgcattacaacaagattgatcacattcatcctggtag 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19647252 atccttggtaaactgatttggtatacaactcccaaaaccttctttataagtgccagcacactttgcattacaacaagattgatcacattcatcctggtag 19647153  T
Q  301 catgttcccatgccaatacgacacaaattgtttgaggaaggatcttgattgaaagtacaagtgcataggttgaagagat 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19647152 catgttcccatgccaatacgacacaaattgtttgaggaaggatcttgattgaaagtacaagtgcataggttgaagagat 19647074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 3170134 - 3170292
Alignment:
Q  2 cattacttcacaagtgtgtcctttacattacaacttgagtcctatttatagga------tacaaatagtaagtgaatgatcaaatgaaattaaacatcac 95  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||    
T  3170134 cattacttca-aagtgtgttttttacattacaacttgagtcctatttataggtatagggtacaaatagtaagtgaatgatcaaatgtaattaaacatcac 3170232  T
Q  96 taacaatccattcagtaatgggagttataagaacgtggaagatcaaggttatggacatccac 157  Q
    |||||||||||||| ||||| |||||||  ||| |||||||| ||||| |||| ||||||||    
T  3170233 taacaatccattcattaatgagagttat--gaatgtggaagaacaaggatatgaacatccac 3170292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 27547361 - 27547227
Alignment:
Q  22 ctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaatgaaattaaacatcactaacaatccattcagtaatgggagt 120  Q
    |||||||| | ||| ||||||||||||||||||||| ||| || | || |||||||| ||| ||| ||| | |||||||||| |||||| |||||||| |    
T  27547361 ctttacatcaaaacatgagtcctatttataggataccaatcagcaggtaaatgatcacatgcaatcaaagagcactaacaattcattcactaatgggaat 27547262  T
Q  121 tataagaacgtggaagatcaaggttatggacatccac 157  Q
    ||||||||  || ||||||||  | ||||||||||||    
T  27547261 tataagaatttgaaagatcaa--taatggacatccac 27547227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 21587185 - 21587291
Alignment:
Q  37 tgagtcctatttataggatacaaat-agtaagtgaatgatcaaatgaaattaaacatcactaacaatccattcagtaatgggagttataagaacgtggaa 135  Q
    |||||||||||||||||| |||||| || ||||||||||||||| | | ||||  ||||||||| || | |||| ||||||| |||||| ||| ||||||    
T  21587185 tgagtcctatttataggacacaaatgagcaagtgaatgatcaaa-gcagttaaggatcactaaccatactttcactaatgggggttataggaaggtggaa 21587283  T
Q  136 gatcaagg 143  Q
    ||| ||||    
T  21587284 gattaagg 21587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 44126751 - 44126824
Alignment:
Q  7 cttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaa 79  Q
    ||||||||||||||| || |||||||||  |  ||||||||||||||| |||||| || |||||||||||||||    
T  44126751 cttcacaagtgtgtcattcacattacaatataggtcctatttataggacacaaatgagcaagtgaatgatcaaa 44126824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 13100844 - 13100788
Alignment:
Q  22 ctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatca 77  Q
    |||||||| | ||| ||||||||||||||||||||||||| || |||||||||||||    
T  13100844 ctttacatcaaaacatgagtcctatttataggatacaaataagcaagtgaatgatca 13100788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 6e-93; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 159 - 379
Target Start/End: Original strand, 18772943 - 18773163
Alignment:
Q  159 tacaataatcgatttctagcttctataggaacaaacacatctatccttggtaaactgatttagtatacaactcccaaaaccttctttataagtgccagca 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||| |||||    
T  18772943 tacaataatcgatttctagcttctataggaacaaacacatctatccttggtaaactgatttggaatacaagtcccaaaaccttgtttataagtggcagca 18773042  T
Q  259 cactttgcattacaacaagattgatcacattcatcctggtagcatgttcccatgccaatacgacacaaattgtttgaggaaggatcttgattgaaagtac 358  Q
    ||||||||||||||||||||||||||||||||| | || |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  18773043 cactttgcattacaacaagattgatcacattcaccttgatagcatgttcccatcccaatacgacacaaattctttgaggaaggattttgattgaaagtac 18773142  T
Q  359 aagtgcataggttgaagagat 379  Q
    |||||||||||| ||||||||    
T  18773143 aagtgcataggtagaagagat 18773163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 21294925 - 21294997
Alignment:
Q  8 ttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaa 79  Q
    |||||||||||||| || |||||||||| | ||||||||||||||||||||||| || |||||||||||||||    
T  21294925 ttcacaagtgtgtcattcacattacaacataagtcctatttataggatacaaatgagcaagtgaatgatcaaa 21294997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 17830753 - 17830842
Alignment:
Q  40 gtcctatttataggatacaaata-gtaagtgaatgatcaaatgaaattaaacatcactaacaatccattcagtaatgggagttataagaa 128  Q
    |||||||||||| |||||||||| | ||||||| ||||| ||| ||| ||| | |||||||||| |||||| |||| |||||||||||||    
T  17830753 gtcctatttatatgatacaaataagcaagtgaaagatcacatgtaatcaaagagcactaacaattcattcactaattggagttataagaa 17830842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 25232148 - 25232017
Alignment:
Q  7 cttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaatgaaattaaacatcactaacaatcca 105  Q
    |||| ||||||||| |||||||||||||  |  ||||||||||| ||| |||||| || |||||||||||||||   ||||||  | ||||||| || ||    
T  25232148 cttctcaagtgtgttctttacattacaatatatgtcctatttatgggacacaaatgagcaagtgaatgatcaaa-ccaattaaggaccactaaccataca 25232050  T
Q  106 ttcagtaatgggagttataagaacgtggaagat 138  Q
    || | |||||||||||||| ||| |||||||||    
T  25232049 tttactaatgggagttataggaaggtggaagat 25232017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 21289627 - 21289699
Alignment:
Q  8 ttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaa 79  Q
    |||| ||||||||| || |||||||||  | |||||||||||||||| |||||| || |||||||||||||||    
T  21289627 ttcataagtgtgtcattcacattacaatataagtcctatttataggacacaaatgagcaagtgaatgatcaaa 21289699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 23818710 - 23818863
Alignment:
Q  4 ttacttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaatagtaagtgaatgatcaaatgaaattaaacatcactaacaatc 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  23818710 ttacttcacaagtgtgtactttacattacaacttgagtcctatttataggatacaaatagtaagtgaatgatcaaatttaattaaacatcactaagaatc 23818809  T
Q  104 cattcagtaatgggagttataagaacgtggaagatcaaggttatggacatccac 157  Q
    || ||| ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  23818810 cactcactaatgggagttataagaatatggaagatcaaggatatggacatccac 23818863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 22477038 - 22477127
Alignment:
Q  54 atacaaatagtaagtgaatgatcaaatgaaattaaacatcactaacaatccattcagtaatgggagttataagaacgtggaagatcaagg 143  Q
    ||||||||| ||| |||||| ||||||| |||||||||||  | ||| | |||||| |||||| |||||||||||  |||||||||||||    
T  22477038 atacaaatattaattgaatggtcaaatgtaattaaacatccttgacagttcattcactaatggaagttataagaatatggaagatcaagg 22477127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 28350603 - 28350724
Alignment:
Q  22 ctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaatgaaattaaacatcactaacaatccatt-cagtaatgggag 119  Q
    |||||||| | ||| ||||||||||||||||||||||||| || ||||||||| ||| ||| ||| ||| | |||||||||| |||| || |||||||||    
T  28350603 ctttacatcaaaacatgagtcctatttataggatacaaataagcaagtgaatgttcacatgcaatcaaagagcactaacaattcattccactaatgggag 28350702  T
Q  120 ttataagaacgtggaagatcaag 142  Q
    |||| ||||| ||||||||||||    
T  28350703 ttat-agaacttggaagatcaag 28350724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 29185553 - 29185612
Alignment:
Q  2 cattacttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat 61  Q
    |||||||||||||||||||  ||||||||||||  |  ||||||||||||||| ||||||    
T  29185553 cattacttcacaagtgtgttttttacattacaatatatgtcctatttataggacacaaat 29185612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 17703101 - 17703045
Alignment:
Q  4 ttacttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaa 60  Q
    ||||||||| ||||||| |||||||| ||||  |  |||||||||||||||||||||    
T  17703101 ttacttcactagtgtgtgctttacatgacaatgtatgtcctatttataggatacaaa 17703045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 25214454 - 25214575
Alignment:
Q  22 ctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaatgaaattaaacatcactaacaatccatt-cagtaatgggag 119  Q
    |||||||| | ||| ||||||||||||||||||||||||| || ||||||||| ||| ||| ||| ||| | |||||||||| |||| || |||||||||    
T  25214454 ctttacatcaaaacatgagtcctatttataggatacaaataagcaagtgaatgttcacatgcaatcaaagagcactaacaattcattccactaatgggag 25214553  T
Q  120 ttataagaacgtggaagatcaag 142  Q
    |||| ||||| ||||||||||||    
T  25214554 ttat-agaacttggaagatcaag 25214575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 25278604 - 25278725
Alignment:
Q  22 ctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaatgaaattaaacatcactaacaatccatt-cagtaatgggag 119  Q
    |||||||| | ||| ||||||||||||||||||||||||| || ||||||||| ||| ||| ||| ||| | |||||||||| |||| || |||||||||    
T  25278604 ctttacatcaaaacatgagtcctatttataggatacaaataagcaagtgaatgttcacatgcaatcaaagagcactaacaattcattccactaatgggag 25278703  T
Q  120 ttataagaacgtggaagatcaag 142  Q
    |||| ||||| ||||||||||||    
T  25278704 ttat-agaacttggaagatcaag 25278725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 24213307 - 24213461
Alignment:
Q  3 attacttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaatgaaattaaacatcactaacaa 101  Q
    |||||||||||||| ||| |||||||||||||  |  ||||||||||||||| |||||| || |||||||||||||||   ||||||| | || |||| |    
T  24213307 attacttcacaagtatgtactttacattacaatataggtcctatttataggacacaaatgagcaagtgaatgatcaaa-ccaattaaagaccaataacca 24213405  T
Q  102 tccattcagtaatgggagttataagaacgtggaagatcaaggttatggacatccac 157  Q
    | |||| | ||||||  |||||||||| ||||||||| ||||  || |||||||||    
T  24213406 tacatttactaatggaggttataagaaggtggaagattaaggccatcgacatccac 24213461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 24228300 - 24228377
Alignment:
Q  3 attacttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaa 79  Q
    |||||||||||||||||| |||||||||||||  |   ||||||||||||||||||| | || |||||||||||||||    
T  24228300 attacttcacaagtgtgtactttacattacaatatagatcctatttataggatacaattgagcaagtgaatgatcaaa 24228377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 12026314 - 12026420
Alignment:
Q  22 ctttacattacaacttgagtcctatttataggatacaaata-gtaagtgaatgatcaaatgaaattaaacatcactaacaatccattcagtaatgggagt 120  Q
    |||||||| | ||| |||||| |||||| |||||||||||| | |||||||||||| | || ||| ||| | |||||||||| |||||| ||||| ||||    
T  12026314 ctttacatcaaaacatgagtcttatttagaggatacaaataagcaagtgaatgatcca-tgcaatcaaagagcactaacaattcattcactaatgagagt 12026412  T
Q  121 tataagaa 128  Q
    ||||||||    
T  12026413 tataagaa 12026420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 7823115 - 7823210
Alignment:
Q  7 cttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaatgaaattaaacatcactaacaat 102  Q
    |||||||||||| || ||||||| | ||| | |||||||||||||||| |||||| || ||||||||| ||| ||| ||| ||| | ||||||||||    
T  7823115 cttcacaagtgtttc-tttacatcaaaacataagtcctatttataggacacaaataagcaagtgaatgttcacatgcaatcaaagagcactaacaat 7823210  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 19441157 - 19441234
Alignment:
Q  3 attacttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaa 79  Q
    |||||||||||||||||||| ||| |||||||  |  ||||||||||||||| |||||| || |||||||||||||||    
T  19441157 attacttcacaagtgtgtccgttatattacaatatatgtcctatttataggacacaaatgagcaagtgaatgatcaaa 19441234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 11444049 - 11444126
Alignment:
Q  3 attacttcacaagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaa 79  Q
    ||||||||||||||||||  || |||||| ||  | |||||||||||||||| |||||| || |||||||||||||||    
T  11444049 attacttcacaagtgtgtaattcacattataatataagtcctatttataggacacaaatgagcaagtgaatgatcaaa 11444126  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 138
Target Start/End: Complemental strand, 29547900 - 29547774
Alignment:
Q  12 caagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaatgaaattaaacatcactaacaatccattcag 110  Q
    ||||||||| |||||||||||||  |  ||||||||||||||| | |||| || |||||||||||||||  |||||||  | ||||||| || |||| |     
T  29547900 caagtgtgttctttacattacaatataggtcctatttataggacataaatgagcaagtgaatgatcaaa-caaattaaggaccactaaccatgcatttac 29547802  T
Q  111 taatgggagttataagaacgtggaagat 138  Q
    |||||||  ||||| ||| |||||||||    
T  29547801 taatggggattataggaaggtggaagat 29547774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 29530245 - 29530177
Alignment:
Q  12 caagtgtgtcctttacattacaacttgagtcctatttataggatacaaat-agtaagtgaatgatcaaa 79  Q
    ||||||||| |||||||||||||  |  |||||||||||| || |||||| || |||||||||||||||    
T  29530245 caagtgtgttctttacattacaatataggtcctatttatatgacacaaatgagcaagtgaatgatcaaa 29530177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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