View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9738_high_12 (Length: 219)

Name: NF9738_high_12
Description: NF9738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9738_high_12
NF9738_high_12
[»] chr7 (16 HSPs)
chr7 (60-123)||(19934317-19934380)
chr7 (60-123)||(19965456-19965519)
chr7 (145-219)||(48628971-48629045)
chr7 (147-178)||(47281422-47281453)
chr7 (148-178)||(31684401-31684431)
chr7 (148-178)||(39033876-39033906)
chr7 (148-178)||(43968555-43968585)
chr7 (150-219)||(47294197-47294266)
chr7 (149-178)||(11476461-11476490)
chr7 (149-178)||(47218961-47218990)
chr7 (150-178)||(2960546-2960574)
chr7 (150-178)||(11476852-11476880)
chr7 (150-178)||(27772982-27773010)
chr7 (150-178)||(31684040-31684068)
chr7 (150-178)||(45723397-45723425)
chr7 (150-178)||(47119837-47119865)
[»] chr3 (17 HSPs)
chr3 (143-178)||(21656725-21656760)
chr3 (148-219)||(50287381-50287452)
chr3 (149-219)||(33151891-33151961)
chr3 (150-219)||(1016890-1016959)
chr3 (148-178)||(19664356-19664386)
chr3 (149-178)||(1687858-1687887)
chr3 (149-178)||(20760367-20760396)
chr3 (149-178)||(21564341-21564370)
chr3 (144-177)||(31122870-31122903)
chr3 (150-178)||(1448641-1448669)
chr3 (150-178)||(8097228-8097256)
chr3 (149-177)||(20813738-20813766)
chr3 (150-178)||(36315268-36315296)
chr3 (150-178)||(38446294-38446322)
chr3 (150-178)||(44152517-44152545)
chr3 (150-178)||(44152880-44152908)
chr3 (150-178)||(49799017-49799045)
[»] chr1 (14 HSPs)
chr1 (146-219)||(16508154-16508227)
chr1 (145-178)||(19274765-19274798)
chr1 (148-178)||(6711678-6711708)
chr1 (150-219)||(28425269-28425338)
chr1 (149-178)||(26549204-26549233)
chr1 (149-178)||(36157973-36158002)
chr1 (149-178)||(37217103-37217132)
chr1 (141-178)||(45670753-45670790)
chr1 (149-178)||(48802236-48802265)
chr1 (150-178)||(24204377-24204405)
chr1 (150-178)||(25800848-25800876)
chr1 (150-178)||(34971275-34971303)
chr1 (150-178)||(46051657-46051685)
chr1 (150-178)||(49594868-49594896)
[»] chr8 (12 HSPs)
chr8 (142-178)||(24430868-24430904)
chr8 (148-178)||(5720425-5720455)
chr8 (148-178)||(35443518-35443548)
chr8 (149-178)||(8137338-8137367)
chr8 (149-178)||(15846954-15846983)
chr8 (149-178)||(43468908-43468937)
chr8 (150-178)||(9884673-9884701)
chr8 (150-178)||(24430477-24430505)
chr8 (150-178)||(33652048-33652076)
chr8 (146-178)||(38107306-38107338)
chr8 (142-178)||(38633608-38633644)
chr8 (150-178)||(41536433-41536461)
[»] chr6 (6 HSPs)
chr6 (142-178)||(12613117-12613153)
chr6 (150-219)||(26393264-26393333)
chr6 (149-178)||(2598005-2598034)
chr6 (145-178)||(17943243-17943276)
chr6 (146-178)||(2643927-2643959)
chr6 (150-178)||(12626843-12626871)
[»] chr5 (21 HSPs)
chr5 (148-219)||(8215715-8215786)
chr5 (146-178)||(14717417-14717449)
chr5 (149-219)||(4016128-4016198)
chr5 (146-177)||(16751958-16751989)
chr5 (149-219)||(38964019-38964089)
chr5 (150-219)||(6252138-6252207)
chr5 (148-178)||(11935292-11935322)
chr5 (148-178)||(17002452-17002482)
chr5 (150-219)||(19659407-19659476)
chr5 (148-178)||(35861501-35861531)
chr5 (148-177)||(3352298-3352327)
chr5 (145-178)||(6331190-6331223)
chr5 (149-178)||(6600432-6600461)
chr5 (149-178)||(20408740-20408769)
chr5 (149-178)||(26035271-26035300)
chr5 (150-178)||(11001024-11001052)
chr5 (142-178)||(16095858-16095894)
chr5 (150-178)||(26593576-26593604)
chr5 (142-178)||(27115997-27116033)
chr5 (150-178)||(33003248-33003276)
chr5 (146-178)||(33760766-33760798)
[»] chr4 (21 HSPs)
chr4 (142-178)||(2055094-2055130)
chr4 (148-219)||(28264809-28264880)
chr4 (149-219)||(26017268-26017338)
chr4 (148-178)||(5227597-5227627)
chr4 (148-178)||(30141373-30141403)
chr4 (149-178)||(17847420-17847449)
chr4 (149-178)||(19169062-19169091)
chr4 (149-178)||(19496442-19496471)
chr4 (145-178)||(20534402-20534435)
chr4 (149-178)||(22298335-22298364)
chr4 (149-178)||(28160251-28160280)
chr4 (149-178)||(42273647-42273676)
chr4 (149-178)||(50276431-50276460)
chr4 (149-177)||(8882311-8882339)
chr4 (150-178)||(17847003-17847031)
chr4 (150-178)||(28264489-28264517)
chr4 (150-178)||(33173926-33173954)
chr4 (150-178)||(36444588-36444616)
chr4 (142-178)||(48552013-48552049)
chr4 (150-178)||(51371372-51371400)
chr4 (150-178)||(56555440-56555468)
[»] chr2 (14 HSPs)
chr2 (142-178)||(23671710-23671746)
chr2 (146-178)||(37838504-37838536)
chr2 (147-178)||(2057132-2057163)
chr2 (147-178)||(27328791-27328822)
chr2 (147-178)||(37654301-37654332)
chr2 (142-175)||(22066567-22066600)
chr2 (149-178)||(28650331-28650360)
chr2 (149-178)||(38750863-38750892)
chr2 (150-178)||(920839-920867)
chr2 (150-178)||(2094317-2094345)
chr2 (150-178)||(7297171-7297199)
chr2 (146-178)||(27328399-27328431)
chr2 (150-178)||(36211254-36211282)
chr2 (150-178)||(37732099-37732127)
[»] scaffold0117 (1 HSPs)
scaffold0117 (147-178)||(14492-14523)
[»] scaffold1562 (1 HSPs)
scaffold1562 (145-175)||(780-810)
[»] scaffold1158 (1 HSPs)
scaffold1158 (145-175)||(1783-1813)
[»] scaffold1986 (1 HSPs)
scaffold1986 (150-178)||(293-321)
[»] scaffold0717 (1 HSPs)
scaffold0717 (145-177)||(2054-2086)
[»] scaffold0004 (1 HSPs)
scaffold0004 (146-178)||(219093-219125)


Alignment Details
Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 19934317 - 19934380
Alignment:
Q  60 ggattaaggttagggttttgagttttgaaatgacacgctcaattccaaatgaagataggattag 123  Q
    |||||| ||||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||    
T  19934317 ggattagggttagggttttgagttttgaaatgtcacgatcaatttcaactgaagataggattag 19934380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 19965456 - 19965519
Alignment:
Q  60 ggattaaggttagggttttgagttttgaaatgacacgctcaattccaaatgaagataggattag 123  Q
    |||||| ||||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||    
T  19965456 ggattagggttagggttttgagttttgaaatgtcacgatcaatttcaactgaagataggattag 19965519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 48629045 - 48628971
Alignment:
Q  145 tatataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    ||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  48629045 tatataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagt 48628971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 178
Target Start/End: Complemental strand, 47281453 - 47281422
Alignment:
Q  147 tataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||||    
T  47281453 tataggtcaaatgcatctaaaggtcctttaag 47281422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 31684431 - 31684401
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  31684431 ataggtcaaatgcatctaaaggtcctttaag 31684401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 39033876 - 39033906
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  39033876 ataggtcaaatgcatctaaaggtcctttaag 39033906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 43968585 - 43968555
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  43968585 ataggtcaaatgcatctaaaggtcctttaag 43968555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 47294197 - 47294266
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  47294197 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagt 47294266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 11476461 - 11476490
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  11476461 taggtcaaatgcatctaaaggtcctttaag 11476490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 47218961 - 47218990
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  47218961 taggtcaaatgcatctaaaggtcctttaag 47218990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 2960546 - 2960574
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  2960546 aggtcaaatgcatctaaaggtcctttaag 2960574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 11476880 - 11476852
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  11476880 aggtcaaatgcatctaaaggtcctttaag 11476852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 27772982 - 27773010
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  27772982 aggtcaaatgcatctaaaggtcctttaag 27773010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 31684040 - 31684068
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  31684040 aggtcaaatgcatctaaaggtcctttaag 31684068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 45723397 - 45723425
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  45723397 aggtcaaatgcatctaaaggtcctttaag 45723425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 47119837 - 47119865
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  47119837 aggtcaaatgcatctaaaggtcctttaag 47119865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 21656760 - 21656725
Alignment:
Q  143 attatataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||||||||    
T  21656760 attatataggtcaaatgcatctaaaggtcctttaag 21656725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 50287381 - 50287452
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  50287381 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagt 50287452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 33151961 - 33151891
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    ||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  33151961 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagt 33151891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 1016890 - 1016959
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  1016890 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagt 1016959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 19664356 - 19664386
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  19664356 ataggtcaaatgcatctaaaggtcctttaag 19664386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 1687887 - 1687858
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  1687887 taggtcaaatgcatctaaaggtcctttaag 1687858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 20760396 - 20760367
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  20760396 taggtcaaatgcatctaaaggtcctttaag 20760367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 21564341 - 21564370
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  21564341 taggtcaaatgcatctaaaggtcctttaag 21564370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 31122903 - 31122870
Alignment:
Q  144 ttatataggtcaaatgcatctaaaggtcctttaa 177  Q
    |||| |||||||||||||||||||||||||||||    
T  31122903 ttatttaggtcaaatgcatctaaaggtcctttaa 31122870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 1448641 - 1448669
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  1448641 aggtcaaatgcatctaaaggtcctttaag 1448669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 8097256 - 8097228
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  8097256 aggtcaaatgcatctaaaggtcctttaag 8097228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 177
Target Start/End: Complemental strand, 20813766 - 20813738
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaa 177  Q
    |||||||||||||||||||||||||||||    
T  20813766 taggtcaaatgcatctaaaggtcctttaa 20813738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 36315296 - 36315268
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  36315296 aggtcaaatgcatctaaaggtcctttaag 36315268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 38446294 - 38446322
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  38446294 aggtcaaatgcatctaaaggtcctttaag 38446322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 44152517 - 44152545
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  44152517 aggtcaaatgcatctaaaggtcctttaag 44152545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 44152908 - 44152880
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  44152908 aggtcaaatgcatctaaaggtcctttaag 44152880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 49799017 - 49799045
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  49799017 aggtcaaatgcatctaaaggtcctttaag 49799045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 16508227 - 16508154
Alignment:
Q  146 atataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  16508227 atataggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaaaagt 16508154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 19274798 - 19274765
Alignment:
Q  145 tatataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||||||    
T  19274798 tatataggtcaaatgcatctaaaggtcctttaag 19274765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 6711708 - 6711678
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  6711708 ataggtcaaatgcatctaaaggtcctttaag 6711678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 28425269 - 28425338
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  28425269 aggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaaaagt 28425338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 26549204 - 26549233
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  26549204 taggtcaaatgcatctaaaggtcctttaag 26549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 36158002 - 36157973
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  36158002 taggtcaaatgcatctaaaggtcctttaag 36157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 37217132 - 37217103
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  37217132 taggtcaaatgcatctaaaggtcctttaag 37217103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 45670790 - 45670753
Alignment:
Q  141 ttattatataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  45670790 ttattttataggacaaatgcatctaaaggtcctttaag 45670753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 48802236 - 48802265
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  48802236 taggtcaaatgcatctaaaggtcctttaag 48802265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 24204377 - 24204405
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  24204377 aggtcaaatgcatctaaaggtcctttaag 24204405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 25800876 - 25800848
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  25800876 aggtcaaatgcatctaaaggtcctttaag 25800848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 34971303 - 34971275
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  34971303 aggtcaaatgcatctaaaggtcctttaag 34971275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 46051685 - 46051657
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  46051685 aggtcaaatgcatctaaaggtcctttaag 46051657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 49594868 - 49594896
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  49594868 aggtcaaatgcatctaaaggtcctttaag 49594896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 24430904 - 24430868
Alignment:
Q  142 tattatataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||| ||||||||||||||||||||||||||||||||    
T  24430904 tattttataggtcaaatgcatctaaaggtcctttaag 24430868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 5720425 - 5720455
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  5720425 ataggtcaaatgcatctaaaggtcctttaag 5720455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 35443548 - 35443518
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  35443548 ataggtcaaatgcatctaaaggtcctttaag 35443518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 8137367 - 8137338
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  8137367 taggtcaaatgcatctaaaggtcctttaag 8137338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 15846954 - 15846983
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  15846954 taggtcaaatgcatctaaaggtcctttaag 15846983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 43468908 - 43468937
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  43468908 taggtcaaatgcatctaaaggtcctttaag 43468937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 9884673 - 9884701
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  9884673 aggtcaaatgcatctaaaggtcctttaag 9884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 24430477 - 24430505
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  24430477 aggtcaaatgcatctaaaggtcctttaag 24430505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 33652076 - 33652048
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  33652076 aggtcaaatgcatctaaaggtcctttaag 33652048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 38107338 - 38107306
Alignment:
Q  146 atataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||| ||||||||||    
T  38107338 atataggtcaaatgcatctaaatgtcctttaag 38107306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 38633608 - 38633644
Alignment:
Q  142 tattatataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  38633608 tattatataggtcaaatgcgtctaaaggtcttttaag 38633644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 41536433 - 41536461
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  41536433 aggtcaaatgcatctaaaggtcctttaag 41536461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 12613153 - 12613117
Alignment:
Q  142 tattatataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||| |||||||    
T  12613153 tattatataggtcaaatgcatctaaaggttctttaag 12613117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 26393333 - 26393264
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  26393333 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaaaagt 26393264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 2598005 - 2598034
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  2598005 taggtcaaatgcatctaaaggtcctttaag 2598034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 17943276 - 17943243
Alignment:
Q  145 tatataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||| ||||||||||||||||||||||||||||    
T  17943276 tatattggtcaaatgcatctaaaggtcctttaag 17943243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 2643927 - 2643959
Alignment:
Q  146 atataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||| ||||||||||||||||||||||||||||    
T  2643927 atatgggtcaaatgcatctaaaggtcctttaag 2643959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 12626871 - 12626843
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  12626871 aggtcaaatgcatctaaaggtcctttaag 12626843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 8215715 - 8215786
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  8215715 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagt 8215786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 14717417 - 14717449
Alignment:
Q  146 atataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||||    
T  14717417 atataggtcaaatgcatctaaaggtcctttaag 14717449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 4016198 - 4016128
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    ||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  4016198 taggtcaaatgcatctaaaggtcctttaagttattcgtttttcccaaagtcgtcctttaagtttcaaaagt 4016128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 177
Target Start/End: Original strand, 16751958 - 16751989
Alignment:
Q  146 atataggtcaaatgcatctaaaggtcctttaa 177  Q
    ||||||||||||||||||||||||||||||||    
T  16751958 atataggtcaaatgcatctaaaggtcctttaa 16751989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 38964019 - 38964089
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    ||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  38964019 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagt 38964089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 6252207 - 6252138
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  6252207 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagt 6252138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 11935292 - 11935322
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  11935292 ataggtcaaatgcatctaaaggtcctttaag 11935322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 17002482 - 17002452
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  17002482 ataggtcaaatgcatctaaaggtcctttaag 17002452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 19659407 - 19659476
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  19659407 aggtcaaatgcatctaaaggtcctttaagttttttatttttcccaaagtcgtcctttaagtttcaaaagt 19659476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 35861531 - 35861501
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  35861531 ataggtcaaatgcatctaaaggtcctttaag 35861501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 177
Target Start/End: Complemental strand, 3352327 - 3352298
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaa 177  Q
    ||||||||||||||||||||||||||||||    
T  3352327 ataggtcaaatgcatctaaaggtcctttaa 3352298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 6331190 - 6331223
Alignment:
Q  145 tatataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||| ||||||||||    
T  6331190 tatataggtcaaatgcatctaaatgtcctttaag 6331223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 6600461 - 6600432
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  6600461 taggtcaaatgcatctaaaggtcctttaag 6600432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 20408769 - 20408740
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  20408769 taggtcaaatgcatctaaaggtcctttaag 20408740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 26035271 - 26035300
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  26035271 taggtcaaatgcatctaaaggtcctttaag 26035300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 11001052 - 11001024
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  11001052 aggtcaaatgcatctaaaggtcctttaag 11001024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 16095858 - 16095894
Alignment:
Q  142 tattatataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  16095858 tattatgtaggtcaaatgcatctaaaagtcctttaag 16095894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 26593604 - 26593576
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  26593604 aggtcaaatgcatctaaaggtcctttaag 26593576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 27115997 - 27116033
Alignment:
Q  142 tattatataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||| |||||||||| |||||||    
T  27115997 tattatataggtcaaatgtatctaaaggttctttaag 27116033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 33003276 - 33003248
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  33003276 aggtcaaatgcatctaaaggtcctttaag 33003248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 33760798 - 33760766
Alignment:
Q  146 atataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||| ||||||||||    
T  33760798 atataggtcaaatgcatctaaaagtcctttaag 33760766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 2055094 - 2055130
Alignment:
Q  142 tattatataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||| ||||||||||||||||||||||||||||||    
T  2055094 tattatttaggtcaaatgcatctaaaggtcctttaag 2055130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 28264880 - 28264809
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    |||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  28264880 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaaaagt 28264809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 26017268 - 26017338
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaagnnnnnnnnnnnnnccaaagtcgtcctttaagtttcaaaagt 219  Q
    ||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||    
T  26017268 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctttaagtttcaaaagt 26017338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 5227627 - 5227597
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  5227627 ataggtcaaatgcatctaaaggtcctttaag 5227597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 30141403 - 30141373
Alignment:
Q  148 ataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||    
T  30141403 ataggtcaaatgcatctaaaggtcctttaag 30141373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 17847449 - 17847420
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  17847449 taggtcaaatgcatctaaaggtcctttaag 17847420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 19169091 - 19169062
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  19169091 taggtcaaatgcatctaaaggtcctttaag 19169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 19496471 - 19496442
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  19496471 taggtcaaatgcatctaaaggtcctttaag 19496442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 20534435 - 20534402
Alignment:
Q  145 tatataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||| ||||||    
T  20534435 tatataggtcaaatgcatctaaaggtcatttaag 20534402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 22298335 - 22298364
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  22298335 taggtcaaatgcatctaaaggtcctttaag 22298364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 28160280 - 28160251
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  28160280 taggtcaaatgcatctaaaggtcctttaag 28160251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 42273647 - 42273676
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  42273647 taggtcaaatgcatctaaaggtcctttaag 42273676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 50276460 - 50276431
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  50276460 taggtcaaatgcatctaaaggtcctttaag 50276431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 177
Target Start/End: Complemental strand, 8882339 - 8882311
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaa 177  Q
    |||||||||||||||||||||||||||||    
T  8882339 taggtcaaatgcatctaaaggtcctttaa 8882311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 17847003 - 17847031
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  17847003 aggtcaaatgcatctaaaggtcctttaag 17847031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 28264489 - 28264517
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  28264489 aggtcaaatgcatctaaaggtcctttaag 28264517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 33173926 - 33173954
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  33173926 aggtcaaatgcatctaaaggtcctttaag 33173954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 36444588 - 36444616
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  36444588 aggtcaaatgcatctaaaggtcctttaag 36444616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 48552049 - 48552013
Alignment:
Q  142 tattatataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||| |||||||||||||||||||||||| |||||||    
T  48552049 tattttataggtcaaatgcatctaaaggttctttaag 48552013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 51371400 - 51371372
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  51371400 aggtcaaatgcatctaaaggtcctttaag 51371372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 56555468 - 56555440
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  56555468 aggtcaaatgcatctaaaggtcctttaag 56555440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 23671710 - 23671746
Alignment:
Q  142 tattatataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||| ||||||||||||||||||||||||||||||||    
T  23671710 tattttataggtcaaatgcatctaaaggtcctttaag 23671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 37838536 - 37838504
Alignment:
Q  146 atataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||||||    
T  37838536 atataggtcaaatgcatctaaaggtcctttaag 37838504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 178
Target Start/End: Complemental strand, 2057163 - 2057132
Alignment:
Q  147 tataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||||    
T  2057163 tataggtcaaatgcatctaaaggtcctttaag 2057132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 178
Target Start/End: Complemental strand, 27328822 - 27328791
Alignment:
Q  147 tataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||||    
T  27328822 tataggtcaaatgcatctaaaggtcctttaag 27328791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 178
Target Start/End: Complemental strand, 37654332 - 37654301
Alignment:
Q  147 tataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||||    
T  37654332 tataggtcaaatgcatctaaaggtcctttaag 37654301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 22066567 - 22066600
Alignment:
Q  142 tattatataggtcaaatgcatctaaaggtccttt 175  Q
    ||||| ||||||||||||||||||||||||||||    
T  22066567 tattacataggtcaaatgcatctaaaggtccttt 22066600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 28650331 - 28650360
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  28650331 taggtcaaatgcatctaaaggtcctttaag 28650360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 38750863 - 38750892
Alignment:
Q  149 taggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||    
T  38750863 taggtcaaatgcatctaaaggtcctttaag 38750892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 920839 - 920867
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  920839 aggtcaaatgcatctaaaggtcctttaag 920867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 2094317 - 2094345
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  2094317 aggtcaaatgcatctaaaggtcctttaag 2094345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 7297171 - 7297199
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  7297171 aggtcaaatgcatctaaaggtcctttaag 7297199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 27328399 - 27328431
Alignment:
Q  146 atataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||| ||||||||||    
T  27328399 atataggtcaaatgcatctaaatgtcctttaag 27328431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 36211282 - 36211254
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  36211282 aggtcaaatgcatctaaaggtcctttaag 36211254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 37732099 - 37732127
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  37732099 aggtcaaatgcatctaaaggtcctttaag 37732127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 178
Target Start/End: Original strand, 14492 - 14523
Alignment:
Q  147 tataggtcaaatgcatctaaaggtcctttaag 178  Q
    ||||||||||||||||||||||||||||||||    
T  14492 tataggtcaaatgcatctaaaggtcctttaag 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 810 - 780
Alignment:
Q  145 tatataggtcaaatgcatctaaaggtccttt 175  Q
    |||||||||||||||||||||||||||||||    
T  810 tatataggtcaaatgcatctaaaggtccttt 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 1783 - 1813
Alignment:
Q  145 tatataggtcaaatgcatctaaaggtccttt 175  Q
    |||||||||||||||||||||||||||||||    
T  1783 tatataggtcaaatgcatctaaaggtccttt 1813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 321 - 293
Alignment:
Q  150 aggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||||||||||||||||||||||||||    
T  321 aggtcaaatgcatctaaaggtcctttaag 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 2086 - 2054
Alignment:
Q  145 tatataggtcaaatgcatctaaaggtcctttaa 177  Q
    ||||||||||||||||||| |||||||||||||    
T  2086 tatataggtcaaatgcatcaaaaggtcctttaa 2054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 219125 - 219093
Alignment:
Q  146 atataggtcaaatgcatctaaaggtcctttaag 178  Q
    |||||| ||||||||||||||||||||||||||    
T  219125 atatagatcaaatgcatctaaaggtcctttaag 219093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University