View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9741_high_11 (Length: 237)
Name: NF9741_high_11
Description: NF9741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9741_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 7558957 - 7559179
Alignment:
| Q |
1 |
ctcaaagcacactctcaaaagctctcactctcatagcaagttctctaaccatggaagcctcaaagatgctactattctctccaatatcaacaccaaagac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7558957 |
ctcaaagcacactctcaaaagctctcactctcatagcaagttctctaaccatggaagcctcaaagatgctactattctctccaatatcaacaccaaagac |
7559056 |
T |
|
| Q |
101 |
atttacaaaccatttaaatcacccactaagaaagccaaaatctcgtcatgtgagactcaaactcaagataacaaacatggcaaaggaaggaagcgacact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7559057 |
atttacaaaccatttaaatcacccactaagaaagccaaaatctcatcatgtgagactcaaactcaagataacaaacatggcaaaggaaggaagcgacact |
7559156 |
T |
|
| Q |
201 |
aacagcagcccaacagagatagc |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
7559157 |
aacagcagcccaacagagatagc |
7559179 |
T |
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