View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9741_low_8 (Length: 277)
Name: NF9741_low_8
Description: NF9741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9741_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 24 - 269
Target Start/End: Complemental strand, 2768428 - 2768181
Alignment:
| Q |
24 |
ggaacctaagcctcctcgtacgacacataaattacttcaggta-tctcattttaacacttggaagtgctaattgatgaggaaaataaaaactgttatctt |
122 |
Q |
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| T |
2768428 |
ggaacctaagcctcctcgtacgacacataaattacttcaggtaatctcattttaacacttggaagtgctaattgatgaggaaaataaaaactgttatctt |
2768329 |
T |
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| Q |
123 |
cgttaactgatgttaacgtctttcttcagtttatcgtatgctttttaacacccgttgcatcaaagcattataacctataa-ggtataccatcctacttta |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
2768328 |
cgttaactgatgttaacgtctttcttcagtttatcgtatgctttttaacacccgttgcatcaaagcattataacctataagggtataccatcctacttta |
2768229 |
T |
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| Q |
222 |
acatatgtttggatgcgtggctgtaactttttcttgcatccctatgct |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2768228 |
gcatatgtttggatgcgtggctgtaactttttcttgcatccctatgct |
2768181 |
T |
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