View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9742_high_7 (Length: 240)
Name: NF9742_high_7
Description: NF9742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9742_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 1946514 - 1946298
Alignment:
| Q |
8 |
tatccatcatagtttgttaaatgccaaataatattattaatttctttc-ggaaccagtttgtcatgacatgaatatacttaatttatcaaatcgagtttg |
106 |
Q |
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| T |
1946514 |
tatccatcatagtttgttaaatgccaaataatattattaatttctttccggacccagtttgtcatgacatggatatacttaaattatcaaatcgagtttg |
1946415 |
T |
|
| Q |
107 |
ttttcaagcatttgaatttcttttatttttcaaaacaggccaaaacaaatttaggcgaagtattttaagtttaacatttgtattaaattagctcttttac |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
1946414 |
ttttcaagcatttgaatttcttttatttttcaaaacaggccaaaacaaatttaggcgaagtattttaagtttaacatttgtattaaattagttcttttac |
1946315 |
T |
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| Q |
207 |
tttttacagttttagat |
223 |
Q |
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||||||||||||||||| |
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| T |
1946314 |
tttttacagttttagat |
1946298 |
T |
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