View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9744_high_7 (Length: 291)
Name: NF9744_high_7
Description: NF9744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9744_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 6 - 276
Target Start/End: Original strand, 32487775 - 32488043
Alignment:
| Q |
6 |
gagaagcagagatggaagatcttaattaggctgcaatttttcataacatgatgattatgtcacaatatgaacaagaaataatactctgtagtgtactaag |
105 |
Q |
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| T |
32487775 |
gagaagcagagatggaagatcttaattaggctgcaatttttcataacatgatgattatgtcacaatatgaacaagaaataatactctgtagtgtactaag |
32487874 |
T |
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| Q |
106 |
acatcaaaatatgaacaagaaattaaagaactgtttaggaaaatgcagtaaccaatgttggatctattgactgaggcacattaacaccaacnnnnnnnnn |
205 |
Q |
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| T |
32487875 |
acatcaaaatatgaacaagaaattaaagaactgtttaggaaaatgcagtaaccaatgttggatctattgactgaggcacattaacacc--caaaaaaaaa |
32487972 |
T |
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| Q |
206 |
cttgatagtgacaatttatagtagttggcatgaactgacctagatatatattgcacattatatgatacatg |
276 |
Q |
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| T |
32487973 |
cttgatagtgacaatttatagtagttggcatgaactgacttagatatatattgcacattatatgatacatg |
32488043 |
T |
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