View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9749_low_17 (Length: 272)

Name: NF9749_low_17
Description: NF9749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9749_low_17
NF9749_low_17
[»] chr5 (21 HSPs)
chr5 (122-272)||(7805236-7805386)
chr5 (122-272)||(14374300-14374450)
chr5 (122-272)||(13582469-13582620)
chr5 (139-272)||(24435664-24435799)
chr5 (23-123)||(13582269-13582371)
chr5 (23-86)||(7805510-7805577)
chr5 (31-67)||(31732494-31732530)
chr5 (34-67)||(557648-557681)
chr5 (34-67)||(562420-562453)
chr5 (34-67)||(8041331-8041364)
chr5 (34-67)||(8771216-8771249)
chr5 (34-67)||(12044240-12044273)
chr5 (34-67)||(13300598-13300631)
chr5 (34-67)||(15394963-15394996)
chr5 (34-67)||(21323149-21323182)
chr5 (139-224)||(21826746-21826836)
chr5 (34-67)||(32460653-32460686)
chr5 (34-67)||(36936619-36936652)
chr5 (34-67)||(36941373-36941406)
chr5 (34-67)||(41997595-41997628)
chr5 (34-67)||(42002386-42002419)
[»] chr1 (18 HSPs)
chr1 (122-272)||(10106268-10106418)
chr1 (122-272)||(13890978-13891129)
chr1 (129-272)||(38734440-38734584)
chr1 (143-272)||(26650964-26651096)
chr1 (139-191)||(39747077-39747129)
chr1 (140-269)||(14582267-14582399)
chr1 (150-272)||(19422679-19422804)
chr1 (30-67)||(1067371-1067408)
chr1 (30-67)||(19725011-19725048)
chr1 (209-272)||(5602291-5602355)
chr1 (150-191)||(17213936-17213980)
chr1 (23-57)||(26650691-26650725)
chr1 (23-57)||(38734614-38734648)
chr1 (34-67)||(3095042-3095075)
chr1 (30-67)||(26319350-26319387)
chr1 (34-67)||(41097067-41097100)
chr1 (153-197)||(12260570-12260614)
chr1 (34-66)||(40232501-40232533)
[»] chr4 (13 HSPs)
chr4 (122-272)||(653208-653359)
chr4 (23-123)||(653457-653560)
chr4 (139-269)||(10120603-10120736)
chr4 (139-191)||(10120375-10120427)
chr4 (150-191)||(24490281-24490322)
chr4 (30-67)||(41817739-41817776)
chr4 (31-67)||(34561356-34561392)
chr4 (34-67)||(3997174-3997207)
chr4 (34-67)||(7902220-7902253)
chr4 (34-67)||(13521094-13521127)
chr4 (30-67)||(14867894-14867931)
chr4 (34-67)||(15799243-15799276)
chr4 (30-67)||(39320514-39320551)
[»] chr8 (17 HSPs)
chr8 (139-272)||(19430179-19430313)
chr8 (139-272)||(19435681-19435815)
chr8 (139-272)||(19571830-19571964)
chr8 (143-272)||(19566328-19566458)
chr8 (139-272)||(31030694-31030830)
chr8 (143-272)||(33616524-33616656)
chr8 (139-236)||(13584502-13584601)
chr8 (23-57)||(19435940-19435974)
chr8 (23-57)||(19572089-19572123)
chr8 (23-57)||(31031055-31031089)
chr8 (23-57)||(33616343-33616377)
chr8 (34-67)||(4237449-4237482)
chr8 (34-67)||(4242188-4242221)
chr8 (34-67)||(8330494-8330527)
chr8 (34-67)||(25367116-25367149)
chr8 (34-67)||(37772658-37772691)
chr8 (34-67)||(43301839-43301872)
[»] chr3 (22 HSPs)
chr3 (139-272)||(13022192-13022326)
chr3 (143-272)||(53119693-53119825)
chr3 (122-269)||(33089120-33089270)
chr3 (139-269)||(20810540-20810673)
chr3 (139-272)||(38436752-38436888)
chr3 (26-68)||(26929140-26929181)
chr3 (23-81)||(13022514-13022576)
chr3 (32-67)||(35455987-35456022)
chr3 (127-225)||(8196974-8197077)
chr3 (34-67)||(3034596-3034629)
chr3 (34-67)||(3673518-3673551)
chr3 (34-67)||(3693572-3693605)
chr3 (34-67)||(8070632-8070665)
chr3 (127-191)||(8223493-8223560)
chr3 (34-67)||(8884123-8884156)
chr3 (34-67)||(10585299-10585332)
chr3 (34-67)||(12898857-12898890)
chr3 (150-222)||(21494114-21494188)
chr3 (34-67)||(45903690-45903723)
chr3 (150-190)||(53358660-53358703)
chr3 (34-67)||(53359036-53359069)
chr3 (23-51)||(38436539-38436567)
[»] chr7 (16 HSPs)
chr7 (139-272)||(28292297-28292433)
chr7 (139-272)||(24528520-24528656)
chr7 (143-269)||(9973630-9973759)
chr7 (139-217)||(33226571-33226648)
chr7 (30-67)||(47102482-47102519)
chr7 (30-65)||(19641247-19641282)
chr7 (150-224)||(19096777-19096856)
chr7 (23-57)||(24528881-24528915)
chr7 (23-57)||(28292123-28292157)
chr7 (34-67)||(8076948-8076981)
chr7 (30-67)||(8954355-8954392)
chr7 (30-67)||(9009087-9009124)
chr7 (34-67)||(9650069-9650102)
chr7 (34-67)||(27257169-27257202)
chr7 (30-67)||(39049448-39049485)
chr7 (34-67)||(40864511-40864544)
[»] chr2 (9 HSPs)
chr2 (139-272)||(42914807-42914943)
chr2 (139-269)||(5089446-5089579)
chr2 (127-224)||(24292931-24293033)
chr2 (26-67)||(39959627-39959667)
chr2 (127-224)||(6856720-6856822)
chr2 (34-67)||(7559439-7559472)
chr2 (34-67)||(10159824-10159857)
chr2 (127-191)||(24286363-24286430)
chr2 (34-67)||(30659097-30659130)
[»] scaffold0011 (2 HSPs)
scaffold0011 (139-272)||(7212-7348)
scaffold0011 (139-272)||(1731-1867)
[»] chr6 (8 HSPs)
chr6 (139-191)||(13604896-13604948)
chr6 (139-256)||(19478330-19478449)
chr6 (125-224)||(26981118-26981222)
chr6 (138-184)||(17281358-17281404)
chr6 (23-56)||(29325946-29325979)
chr6 (26-57)||(3902803-3902834)
chr6 (23-53)||(29326116-29326146)
chr6 (153-189)||(2759884-2759920)
[»] scaffold0061 (1 HSPs)
scaffold0061 (30-67)||(49068-49105)
[»] scaffold0017 (1 HSPs)
scaffold0017 (30-67)||(149529-149566)
[»] scaffold0015 (1 HSPs)
scaffold0015 (127-224)||(193736-193838)
[»] scaffold0357 (1 HSPs)
scaffold0357 (127-224)||(3816-3918)
[»] scaffold0182 (1 HSPs)
scaffold0182 (34-67)||(8988-9021)
[»] scaffold0060 (2 HSPs)
scaffold0060 (34-67)||(47082-47115)
scaffold0060 (34-67)||(52026-52059)
[»] scaffold0045 (1 HSPs)
scaffold0045 (34-67)||(83853-83886)
[»] scaffold0044 (2 HSPs)
scaffold0044 (30-67)||(65385-65422)
scaffold0044 (34-67)||(81633-81666)
[»] scaffold0041 (1 HSPs)
scaffold0041 (34-67)||(34833-34866)


Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 122 - 272
Target Start/End: Complemental strand, 7805386 - 7805236
Alignment:
Q  122 aattacacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 221  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7805386 aattaaacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 7805287  T
Q  222 caaacagaacggctacgcaccgtatagaatagtttaatcaaacgattaaac 272  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  7805286 caaacagaacggcttcgtaccgtattgaatagtttaatcaaacgattaaac 7805236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 122 - 272
Target Start/End: Complemental strand, 14374450 - 14374300
Alignment:
Q  122 aattacacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 221  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14374450 aattaaacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcttcttctgtccctttcggttt 14374351  T
Q  222 caaacagaacggctacgcaccgtatagaatagtttaatcaaacgattaaac 272  Q
    || ||||||||||| || ||||||| |||||||||||||||||||||||||    
T  14374350 catacagaacggcttcgtaccgtattgaatagtttaatcaaacgattaaac 14374300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 122 - 272
Target Start/End: Original strand, 13582469 - 13582620
Alignment:
Q  122 aattacacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 221  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13582469 aatttcacagttgaaacttccggtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 13582568  T
Q  222 caaacagaacggctacgcaccgtatag-aatagtttaatcaaacgattaaac 272  Q
    || ||||||||| |||| || |||| | |||||| ||||| |||||||||||    
T  13582569 catacagaacggttacgtacagtattgaaatagtataatcgaacgattaaac 13582620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 24435664 - 24435799
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctttt-cttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    |||||||| ||||||||||||||||||||||||||  |||| ||||||||||| | ||||  ||||| |||||||||||||| ||||||||||| |||||    
T  24435664 ttcctgtgtgattcctctcttctcccttcgacttgaattaaagagtcattcttctgcttctactcct-ttctgtccctttcgatttcaaacagagcggct 24435762  T
Q  236 acgcaccgtatagaatagtttaatcaaacgattaaac 272  Q
    ||| ||||||| ||||||| |||||||||||||||||    
T  24435763 acgtaccgtattgaatagtctaatcaaacgattaaac 24435799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 13582269 - 13582371
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaattta---atcattatctgaacgcgttacgatccaacccaatccaaaacgtgcgtccggatacatcca 119  Q
    |||||||||||||||||||||||||||| |||||| |   ||||||||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||    
T  13582269 ttgtcacttgaaaatgataaattaatta-ttaattaattcatcattatctgaacgcgctacgattcaacacaatccaaaacgtgcgtccagatacatcca 13582367  T
Q  120 ataa 123  Q
    ||||    
T  13582368 ataa 13582371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 7805577 - 7805510
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaatta----atttaatcattatctgaacgcgttacgatcca 86  Q
    |||||||||||||||||||||||||||| |||    ||||| ||||||||||||||||||||||||||    
T  7805577 ttgtcacttgaaaatgataaattaattatttatttaatttagtcattatctgaacgcgttacgatcca 7805510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 31732530 - 31732494
Alignment:
Q  31 tgaaaatgataaattaattaattaatttaatcattat 67  Q
    ||||||||||||||||| |||||||||||||||||||    
T  31732530 tgaaaatgataaattaaataattaatttaatcattat 31732494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 557681 - 557648
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  557681 aaatgataaattaaataattaatttaatcattat 557648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 562453 - 562420
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  562453 aaatgataaattaaataattaatttaatcattat 562420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 8041331 - 8041364
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  8041331 aaatgataaattaaataattaatttaatcattat 8041364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 8771249 - 8771216
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    ||||||||||||||||| ||||||||||||||||    
T  8771249 aaatgataaattaattatttaatttaatcattat 8771216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 12044240 - 12044273
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  12044240 aaatgataaattaaataattaatttaatcattat 12044273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 13300598 - 13300631
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  13300598 aaatgataaattaaataattaatttaatcattat 13300631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 15394963 - 15394996
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  15394963 aaatgataaattaaataattaatttaatcattat 15394996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 21323149 - 21323182
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  21323149 aaatgataaattaaataattaatttaatcattat 21323182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 21826836 - 21826746
Alignment:
Q  139 ttcctgtgcgattcctctcttctccctt---cgacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggtttcaa 224  Q
    |||||||||  |||||||||||||||||   |||||||| || ||||||| ||||| | || || |||  |||||||||||||||||||||    
T  21826836 ttcctgtgcttttcctctcttctccctttttcgacttgtcttgacgagtctttcttctttttctactcctttctgtccctttcggtttcaa 21826746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 32460653 - 32460686
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  32460653 aaatgataaattaaataattaatttaatcattat 32460686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 36936619 - 36936652
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  36936619 aaatgataaattaaataattaatttaatcattat 36936652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 36941373 - 36941406
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  36941373 aaatgataaattaaataattaatttaatcattat 36941406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 41997628 - 41997595
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  41997628 aaatgataaattaaataattaatttaatcattat 41997595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 42002419 - 42002386
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  42002419 aaatgataaattaaataattaatttaatcattat 42002386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 5e-68; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 122 - 272
Target Start/End: Complemental strand, 10106418 - 10106268
Alignment:
Q  122 aattacacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10106418 aattacacagttgaaacttcctgtgcgattcctctcttctcccttcgacttctgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 10106319  T
Q  222 caaacagaacggctacgcaccgtatagaatagtttaatcaaacgattaaac 272  Q
    ||| |||||||||| || ||||||| |||||||||||||||||||||||||    
T  10106318 caatcagaacggcttcgtaccgtattgaatagtttaatcaaacgattaaac 10106268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 122 - 272
Target Start/End: Complemental strand, 13891129 - 13890978
Alignment:
Q  122 aattacacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 221  Q
    |||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13891129 aattacgcagttgatgattcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 13891030  T
Q  222 caaacagaacggctacgcaccgtatagaatag-tttaatcaaacgattaaac 272  Q
    | ||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  13891029 cgaacagaacggctacgtaccgtattgaatagttttaatcaaacgattaaac 13890978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 129 - 272
Target Start/End: Complemental strand, 38734584 - 38734440
Alignment:
Q  129 cagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggtttcaaacag 228  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| |||| || ||    
T  38734584 cagttgaagattcatgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttccttctcttcttctgtccctttcgatttcgaatag 38734485  T
Q  229 aacggctacgcaccgtatagaatag-tttaatcaaacgattaaac 272  Q
    | |||||||| ||||||| |||||| |||||||||||||||||||    
T  38734484 agcggctacgtaccgtattgaatagttttaatcaaacgattaaac 38734440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 143 - 272
Target Start/End: Original strand, 26650964 - 26651096
Alignment:
Q  143 tgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattct-tttcttc--ctcctcttctgtccctttcggtttcaaacagaacggctacgc 239  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||  | ||||  ||||| ||| ||||||||||||||| || ||| ||||||||     
T  26650964 tgtgcgattcctctcttctcccttcgacttgtattaacgagtcgttctcctgcttctactcct-ttcagtccctttcggtttcgaatagagcggctacgt 26651062  T
Q  240 accgtatagaatag-tttaatcaaacgattaaac 272  Q
    ||||||| |||||| |||||||||||||||||||    
T  26651063 accgtattgaatagttttaatcaaacgattaaac 26651096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 39747077 - 39747129
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39747077 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt 39747129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 269
Target Start/End: Complemental strand, 14582399 - 14582267
Alignment:
Q  140 tcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttcctcctc-ttctgtccctttcggtttcaaacagaacggctac 237  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||   ||||  | || |||| |||||||||||||| || ||| |||||||    
T  14582399 tcctgtgccattcctctcttctcccttcgatttgtgttaacgagtcattcttcggcttctacttctttctatccctttcggtttcgaatagagcggctac 14582300  T
Q  238 gcaccgtatagaatag-tttaatcaaacgatta 269  Q
      ||||||| |||||| ||||||| ||||||||    
T  14582299 ataccgtattgaatagttttaatcgaacgatta 14582267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 19422679 - 19422804
Alignment:
Q  150 ttcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggctacgcaccgtat 246  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||||  ||||| ||||||||||||||||||| |  ||| |||||||  |||||||    
T  19422679 ttcctctcttctcccttcgacttgtgttaacgagtcactcttgtgcttctactcct-ttctgtccctttcggtttcgattagagcggctacataccgtat 19422777  T
Q  247 agaatag-tttaatcaaacgattaaac 272  Q
     |||||| ||||||| | |||||||||    
T  19422778 tgaatagttttaatcgatcgattaaac 19422804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 1067408 - 1067371
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| |||||||||||||||||||    
T  1067408 ttgaaaatgataaattaaataattaatttaatcattat 1067371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 19725011 - 19725048
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  19725011 ttgaaaatgataaattaattatttaatttaatcattat 19725048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 5602291 - 5602355
Alignment:
Q  209 tccctttcggtttcaaacagaacggctacgcaccgtatagaatag-tttaatcaaacgattaaac 272  Q
    |||||||||||||| || ||| |||||| | ||||||| |||||| |||||||||||||||||||    
T  5602291 tccctttcggtttcgaatagagcggctatgtaccgtattgaatagttttaatcaaacgattaaac 5602355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 17213936 - 17213980
Alignment:
Q  150 ttcctctcttctccct---tcgacttgtgttaacgagtcattctt 191  Q
    ||||||||||||||||   ||||||||||||||||||||||||||    
T  17213936 ttcctctcttctccctccttcgacttgtgttaacgagtcattctt 17213980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 26650691 - 26650725
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaatt 57  Q
    |||||||||||||||||||||||||||| ||||||    
T  26650691 ttgtcacttgaaaatgataaattaattatttaatt 26650725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 38734648 - 38734614
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaatt 57  Q
    |||||||||||||||||||||||||||| ||||||    
T  38734648 ttgtcacttgaaaatgataaattaattatttaatt 38734614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 3095075 - 3095042
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  3095075 aaatgataaattaaataattaatttaatcattat 3095042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 26319350 - 26319387
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  26319350 ttgaaaatgataaattaaataattaatataatcattat 26319387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 41097067 - 41097100
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  41097067 aaatgataaattaaataattaatttaatcattat 41097100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 12260614 - 12260570
Alignment:
Q  153 ctctcttctcccttcgacttgtgttaacgagtcattcttttcttc 197  Q
    |||||||||||||||  ||||||||||||||| |||||| |||||    
T  12260614 ctctcttctcccttcagcttgtgttaacgagttattcttctcttc 12260570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 40232501 - 40232533
Alignment:
Q  34 aaatgataaattaattaattaatttaatcatta 66  Q
    |||||||||||||| ||||||||||||||||||    
T  40232501 aaatgataaattaaataattaatttaatcatta 40232533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 122 - 272
Target Start/End: Complemental strand, 653359 - 653208
Alignment:
Q  122 aattacacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggttt 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  653359 aattacacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcagttt 653260  T
Q  222 caaacagaacggctacgcaccgtatag-aatagtttaatcaaacgattaaac 272  Q
    |||||||||||| |||| ||||||| | |||||| ||||| |||||||||||    
T  653259 caaacagaacggttacgtaccgtattgaaatagtataatcgaacgattaaac 653208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 653560 - 653457
Alignment:
Q  23 ttgtcacttgaaaatgataaattaatta---attaatttaatcattatctgaacgcgttacgatccaacccaatccaaaacgtgcgtccggatacatcca 119  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  653560 ttgtcacttgaaaatgataaattaattattaattaatttaatcattatctgaacgcgttacgattaaacccaatccaaaacgtgcgtccagatacatcca 653461  T
Q  120 ataa 123  Q
    ||||    
T  653460 ataa 653457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 269
Target Start/End: Original strand, 10120603 - 10120736
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||| | ||||  || || |||| |||||||||||||| || ||| |||||    
T  10120603 ttcctgtgtgattcctctctactcccttcgacttgtgttaacgagtcattcttctgcttctactact-ttctatccctttcggtttcgaatagagcggct 10120701  T
Q  236 acgcaccgtatagaatagtt-taatcaaacgatta 269  Q
    ||| ||||||| |||||||| ||||| ||||||||    
T  10120702 acgtaccgtattgaatagttctaatctaacgatta 10120736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 10120375 - 10120427
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt 191  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10120375 ttcctgtgtgattcctctcttctcccttcgacttgtgttaacgagtcattctt 10120427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 24490322 - 24490281
Alignment:
Q  150 ttcctctcttctcccttcgacttgtgttaacgagtcattctt 191  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24490322 ttcctctcttctcccttcgacttgtgttaacgagtcattctt 24490281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 41817776 - 41817739
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| |||||||||||||||||||    
T  41817776 ttgaaaatgataaattaaataattaatttaatcattat 41817739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 34561392 - 34561356
Alignment:
Q  31 tgaaaatgataaattaattaattaatttaatcattat 67  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34561392 tgaaaatgataaattaaataattaatttaatcattat 34561356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 3997174 - 3997207
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  3997174 aaatgataaattaaataattaatttaatcattat 3997207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 7902220 - 7902253
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  7902220 aaatgataaattaaataattaatttaatcattat 7902253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 13521094 - 13521127
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  13521094 aaatgataaattaaataattaatttaatcattat 13521127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 14867894 - 14867931
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| || ||||||||||||||||    
T  14867894 ttgaaaatgataaattaaatatttaatttaatcattat 14867931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 15799243 - 15799276
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  15799243 aaatgataaattaaataattaatttaatcattat 15799276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 39320551 - 39320514
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  39320551 ttgaaaatgataaattaaataatttatttaatcattat 39320514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 19430313 - 19430179
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggtttcaaacagaacggctacg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || ||||||||||||    
T  19430313 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttccttctcctcttctgtccctttcggtttcgaatagaacggctacg 19430214  T
Q  239 caccgtatagaatag-tttaatcaaacgattaaac 272  Q
     ||||||| |||||| |||||||||||||||||||    
T  19430213 taccgtattgaatagttttaatcaaacgattaaac 19430179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 19435815 - 19435681
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggtttcaaacagaacggctacg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || ||||||||||||    
T  19435815 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttccttctcctcttctgtccctttcggtttcgaatagaacggctacg 19435716  T
Q  239 caccgtatagaatag-tttaatcaaacgattaaac 272  Q
     ||||||| |||||| |||||||||||||||||||    
T  19435715 taccgtattgaatagttttaatcaaacgattaaac 19435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 19571964 - 19571830
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggtttcaaacagaacggctacg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || ||||||||||||    
T  19571964 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttccttctcctcttctgtccctttcggtttcgaatagaacggctacg 19571865  T
Q  239 caccgtatagaatag-tttaatcaaacgattaaac 272  Q
     ||||||| |||||| |||||||||||||||||||    
T  19571864 taccgtattgaatagttttaatcaaacgattaaac 19571830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 143 - 272
Target Start/End: Complemental strand, 19566458 - 19566328
Alignment:
Q  143 tgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggtttcaaacagaacggctacgcacc 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || |||||||||||| |||    
T  19566458 tgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttccttctcctcttctgtccctttcggtttcgaatagaacggctacgtacc 19566359  T
Q  243 gtatagaatag-tttaatcaaacgattaaac 272  Q
    |||| |||||| |||||||||||||||||||    
T  19566358 gtattgaatagttttaatcaaacgattaaac 19566328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 31030830 - 31030694
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||||||||| || ||| |||||    
T  31030830 ttcctgtgcaattcctctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcct-ttctgtccctttcggtttcgaatagagcggct 31030732  T
Q  236 acgcaccgtatagaatagttt-aatcaaacgattaaac 272  Q
    ||| ||||||| ||||||||| |||| |||||||||||    
T  31030731 acgtaccgtattgaatagtttcaatcgaacgattaaac 31030694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 143 - 272
Target Start/End: Original strand, 33616524 - 33616656
Alignment:
Q  143 tgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggctacgc 239  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||| ||||| || ||| ||||||||     
T  33616524 tgtgcgattcctcttttctcccttcgacttgtgttaacgagtcattcttctgcttctactcct-ttctgtccctttcagtttcgaatagagcggctacgt 33616622  T
Q  240 accgtatagaatag-tttaatcaaacgattaaac 272  Q
    ||||||| |||||| |||||||||||||||||||    
T  33616623 accgtattgaatagatttaatcaaacgattaaac 33616656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 13584601 - 13584502
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||||||||| || ||| |||||    
T  13584601 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcct-ttctgtccctttcggtttcgaatagagcggct 13584503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 19435974 - 19435940
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaatt 57  Q
    |||||||||||||||||||||||||||| ||||||    
T  19435974 ttgtcacttgaaaatgataaattaattatttaatt 19435940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 19572123 - 19572089
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaatt 57  Q
    |||||||||||||||||||||||||||| ||||||    
T  19572123 ttgtcacttgaaaatgataaattaattatttaatt 19572089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 31031089 - 31031055
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaatt 57  Q
    |||||||||||||||||||||||||||| ||||||    
T  31031089 ttgtcacttgaaaatgataaattaattatttaatt 31031055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 33616343 - 33616377
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaatt 57  Q
    |||||||||||||||||||||||||||| ||||||    
T  33616343 ttgtcacttgaaaatgataaattaattatttaatt 33616377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 4237449 - 4237482
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  4237449 aaatgataaattaaataattaatttaatcattat 4237482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 4242188 - 4242221
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  4242188 aaatgataaattaaataattaatttaatcattat 4242221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 8330494 - 8330527
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  8330494 aaatgataaattaaataattaatttaatcattat 8330527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 25367116 - 25367149
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  25367116 aaatgataaattaaataattaatttaatcattat 25367149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 37772691 - 37772658
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  37772691 aaatgataaattaaataattaatttaatcattat 37772658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 43301839 - 43301872
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  43301839 aaatgataaattaaataattaatttaatcattat 43301872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 3e-51; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 13022326 - 13022192
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggtttcaaacagaacggctacg 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||||||    
T  13022326 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttctttctcctcttctgttcctttcggtttcgaatagaacggctacg 13022227  T
Q  239 caccgtatagaatag-tttaatcaaacgattaaac 272  Q
     ||||||| |||||| |||||||||||||||||||    
T  13022226 taccgtattgaatagttttaatcaaacgattaaac 13022192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 143 - 272
Target Start/End: Complemental strand, 53119825 - 53119693
Alignment:
Q  143 tgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctttt-cttc--ctcctcttctgtccctttcggtttcaaacagaacggctacgc 239  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||  ||||| ||||||||||||||||||| || ||| ||||||||     
T  53119825 tgtgcgattcttctcttctcccttcgacttgtgttaacgagtcgttcttctgcttctactcct-ttctgtccctttcggtttcgaatagagcggctacgt 53119727  T
Q  240 accgtatagaatag-tttaatcaaacgattaaac 272  Q
    ||||||| |||||| |||||||||||||||||||    
T  53119726 accgtattgaatagttttaatcaaacgattaaac 53119693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 33089120 - 33089270
Alignment:
Q  122 aattacacagttgaaacttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcgg 218  Q
    |||||| |||||||   ||||||||||||| |||||||||||||||||||||||||||||||||| |||| | ||||  ||||| || ||||||||||||    
T  33089120 aattacgcagttgatgattcctgtgcgatttctctcttctcccttcgacttgtgttaacgagtcaatcttctgcttctactcct-ttttgtccctttcgg 33089218  T
Q  219 tttcaaacagaacggctacgcaccgtatagaatag-tttaatcaaacgatta 269  Q
    |||| || ||| |||||||| ||||||| |||||| ||||||| ||||||||    
T  33089219 tttcgaatagagcggctacgtaccgtattgaatagttttaatcgaacgatta 33089270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 269
Target Start/End: Complemental strand, 20810673 - 20810540
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| |||||||| |||||||||| ||  ||  ||||    
T  20810673 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcct-ttctgtccttttcggtttcgaatggagtggct 20810575  T
Q  236 acgcaccgtatagaatag-tttaatcaaacgatta 269  Q
    ||| |||||||  ||||| ||||||| ||||||||    
T  20810574 acgtaccgtattcaatagttttaatcgaacgatta 20810540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 38436752 - 38436888
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggtttcaaacagaacggcta 236  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |  | || |||  || ||||| ||||  ||||||| ||| ||||||    
T  38436752 ttcctgtgcgattcctctcttctccctccgacttgtgttaacgagttgttcttctgcttctactcatttatgtccatttcaatttcaaatagagcggcta 38436851  T
Q  237 cgcaccgtatagaatag-tttaatcaaacgattaaac 272  Q
    || ||||||| |||||| |||||||||||||||||||    
T  38436852 cgtaccgtattgaatagttttaatcaaacgattaaac 38436888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 26929181 - 26929140
Alignment:
Q  26 tcacttgaaaatgataaattaattaattaatttaatcattatc 68  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  26929181 tcacttgaaaatgataaattaa-taattaatttaatcattatc 26929140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 13022576 - 13022514
Alignment:
Q  23 ttgtcacttgaaaatgataaattaa----ttaattaatttaatcattatctgaacgcgttacg 81  Q
    |||||||||||||||||||||||||    ||||||||| ||||||||||| ||||||| ||||    
T  13022576 ttgtcacttgaaaatgataaattaattatttaattaatctaatcattatccgaacgcgctacg 13022514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 35455987 - 35456022
Alignment:
Q  32 gaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||| |||||||||||||||||||    
T  35455987 gaaaatgataaattaaataattaatttaatcattat 35456022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 8197077 - 8196974
Alignment:
Q  127 cacagttgaaacttcctgtgcgattcctctcttctcccttc---gacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggttt 221  Q
    |||||||||  ||||||||||  ||||||| ||||||||||   |||||||||| ||||||| ||||| | || || |||  |||||||||||||| |||    
T  8197077 cacagttgatgcttcctgtgcttttcctcttttctcccttctttgacttgtgttgacgagtctttcttctttttctactcctttctgtccctttcgattt 8196978  T
Q  222 caaa 225  Q
    ||||    
T  8196977 caaa 8196974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 3034629 - 3034596
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  3034629 aaatgataaattaaataattaatttaatcattat 3034596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 3673551 - 3673518
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  3673551 aaatgataaattaaataattaatttaatcattat 3673518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 3693605 - 3693572
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  3693605 aaatgataaattaaataattaatttaatcattat 3693572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 8070665 - 8070632
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  8070665 aaatgataaattaaataattaatttaatcattat 8070632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 8223560 - 8223493
Alignment:
Q  127 cacagttgaaacttcctgtgcgattcctctcttctcccttc---gacttgtgttaacgagtcattctt 191  Q
    |||||||||  ||||||||||  ||||||||||||||||||   |||||||||| ||||||| |||||    
T  8223560 cacagttgatgcttcctgtgcttttcctctcttctcccttctttgacttgtgttgacgagtctttctt 8223493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 8884156 - 8884123
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  8884156 aaatgataaattaaataattaatttaatcattat 8884123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 10585299 - 10585332
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  10585299 aaatgataaattaaataattaatttaatcattat 10585332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 12898857 - 12898890
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  12898857 aaatgataaattaaataattaatttaatcattat 12898890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 21494114 - 21494188
Alignment:
Q  150 ttcctctcttctccct---tcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcggtttc 222  Q
    ||||||||||||||||   |||||||||||| ||||||| ||||| |  | ||||| |||||||||||||||||||    
T  21494114 ttcctctcttctccctccttcgacttgtgttgacgagtccttcttcttctactcct-ttctgtccctttcggtttc 21494188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 45903690 - 45903723
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  45903690 aaatgataaattaaataattaatttaatcattat 45903723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 53358703 - 53358660
Alignment:
Q  150 ttcctctcttctccct---tcgacttgtgttaacgagtcattct 190  Q
    ||||||||||||||||   |||||||||||||||||||||||||    
T  53358703 ttcctctcttctccctccttcgacttgtgttaacgagtcattct 53358660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 53359069 - 53359036
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  53359069 aaatgataaattaaataattaatttaatcattat 53359036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 38436539 - 38436567
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaa 51  Q
    |||||||||||||||||||||||||||||    
T  38436539 ttgtcacttgaaaatgataaattaattaa 38436567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 139 - 272
Target Start/End: Original strand, 28292297 - 28292433
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||||||||| || ||| |||||    
T  28292297 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcct-ttctgtccctttcggtttcgaatagagcggct 28292395  T
Q  236 acgcaccgtatagaatag-tttaatcaaacgattaaac 272  Q
    ||| ||||||| |||||| |||||||||||||||||||    
T  28292396 acgtaccgtattgaatagttttaatcaaacgattaaac 28292433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 24528656 - 24528520
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||| ||||||| || ||| |||||    
T  24528656 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcct-ttctgtcccttccggtttcgaatagagcggct 24528558  T
Q  236 acgcaccgtatagaatag-tttaatcaaacgattaaac 272  Q
    ||| ||||||| |||||| |||||||||||||||||||    
T  24528557 acgtaccgtattgaatagttttaatcaaacgattaaac 24528520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 143 - 269
Target Start/End: Complemental strand, 9973759 - 9973630
Alignment:
Q  143 tgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggctacgc 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| ||| ||||||||||||||| || ||| ||||||||     
T  9973759 tgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttctgcttcaactcct-ttccgtccctttcggtttcgaatagagcggctacgt 9973661  T
Q  240 accgtatagaatagttt-aatcaaacgatta 269  Q
    ||||||| ||||||||| |||| ||||||||    
T  9973660 accgtattgaatagtttcaatcgaacgatta 9973630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 33226648 - 33226571
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctcttctgtccctttcg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  | ||||| ||||||||||||||    
T  33226648 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcgttcttctgctactcct-ttctgtccctttcg 33226571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 47102519 - 47102482
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| |||||||||||||||||||    
T  47102519 ttgaaaatgataaattaaataattaatttaatcattat 47102482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 19641282 - 19641247
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcatt 65  Q
    |||||||||||||||||| |||||||||||||||||    
T  19641282 ttgaaaatgataaattaaataattaatttaatcatt 19641247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 19096856 - 19096777
Alignment:
Q  150 ttcctctcttctcccttc---gacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggtttcaa 224  Q
    ||||||||||||||||||   |||||||||| ||||||| ||||| | || || |||  |||||||||||||||||||||    
T  19096856 ttcctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactcctttctgtccctttcggtttcaa 19096777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 24528915 - 24528881
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaatt 57  Q
    |||||||||||||||||||||||||||| ||||||    
T  24528915 ttgtcacttgaaaatgataaattaattatttaatt 24528881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 28292123 - 28292157
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaatt 57  Q
    |||||||||||||||||||||||||||| ||||||    
T  28292123 ttgtcacttgaaaatgataaattaattatttaatt 28292157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 8076981 - 8076948
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  8076981 aaatgataaattaaataattaatttaatcattat 8076948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 8954355 - 8954392
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| || ||||||||||||||||    
T  8954355 ttgaaaatgataaattaaatatttaatttaatcattat 8954392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 9009124 - 9009087
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| || ||||||||||||||||    
T  9009124 ttgaaaatgataaattaaatatttaatttaatcattat 9009087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 9650069 - 9650102
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  9650069 aaatgataaattaaataattaatttaatcattat 9650102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 27257202 - 27257169
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  27257202 aaatgataaattaaataattaatttaatcattat 27257169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 39049448 - 39049485
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  39049448 ttgaaaatgttaaattaaataattaatttaatcattat 39049485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 40864511 - 40864544
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  40864511 aaatgataaattaaataattaatttaatcattat 40864544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 42914943 - 42914807
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||||||||| || ||| |||||    
T  42914943 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttctgcttctactcct-ttctgtccctttcggtttcgaatagagcggct 42914845  T
Q  236 acgcaccgtatagaatag-tttaatcaaacgattaaac 272  Q
    ||  |||||||  ||||| ||||||| |||||||||||    
T  42914844 acataccgtattaaatagttttaatcgaacgattaaac 42914807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 269
Target Start/End: Complemental strand, 5089579 - 5089446
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||||||||| | ||||  ||||| |||||||||||| |||||| || ||| |||||    
T  5089579 ttcctgtgtgattcctctcttctcccttcgacttattttaacgagtcattcttctgcttctactcct-ttctgtcccttttggtttctaatagagcggct 5089481  T
Q  236 acgcaccgtatagaata-gtttaatcaaacgatta 269  Q
    ||| ||||||| |||||  ||||||| ||||||||    
T  5089480 acgtaccgtattgaatatttttaatcgaacgatta 5089446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 24292931 - 24293033
Alignment:
Q  127 cacagttgaaacttcctgtgcgattcctctcttctcc---cttcgacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggttt 221  Q
    |||||||||  ||||||||||  ||||||||||||||   |||||||||||||| ||||||| ||||| | || || |||  |||||||||||||| |||    
T  24292931 cacagttgatgcttcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactccattctgtccctttcgattt 24293030  T
Q  222 caa 224  Q
    |||    
T  24293031 caa 24293033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 39959667 - 39959627
Alignment:
Q  26 tcacttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  39959667 tcacttgaaaatgataaattaa-taattaatttaatcattat 39959627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 6856822 - 6856720
Alignment:
Q  127 cacagttgaaacttcctgtgcgattcctctcttctccct---tcgacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggttt 221  Q
    |||||||||  ||||||||||  ||| ||||||||||||   | |||||||||| ||||||| ||||| | || || |||  ||||||||||||||||||    
T  6856822 cacagttgatgcttcctgtgcttttcttctcttctccctcttttgacttgtgttgacgagtctttcttctttttctactcctttctgtccctttcggttt 6856723  T
Q  222 caa 224  Q
    |||    
T  6856722 caa 6856720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 7559439 - 7559472
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    ||||||||||||||||| ||||||||||||||||    
T  7559439 aaatgataaattaattatttaatttaatcattat 7559472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 10159824 - 10159857
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  10159824 aaatgataaattaaataattaatttaatcattat 10159857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 24286363 - 24286430
Alignment:
Q  127 cacagttgaaacttcctgtgcgattcctctcttctcc---cttcgacttgtgttaacgagtcattctt 191  Q
    |||||||||  ||||||||||  ||||||||||||||   |||||||||||||| ||||||| |||||    
T  24286363 cacagttgatgcttcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttctt 24286430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 30659130 - 30659097
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  30659130 aaatgataaattaaataattaatttaatcattat 30659097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 7348 - 7212
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggtttcaaacagaacggcta 236  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||| |  | || |||  ||||||||||||||||||| |  ||| ||| |     
T  7348 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacaagtcgttcttctgcttctactcttttctgtccctttcggtttcgattagagcggatg 7249  T
Q  237 cgcaccgtatagaatag-tttaatcaaacgattaaac 272  Q
    || || |||| |||||| |||||||||||||||||||    
T  7248 cgtactgtattgaatagttttaatcaaacgattaaac 7212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 1867 - 1731
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt-ttcttc--ctcctcttctgtccctttcggtttcaaacagaacggct 235  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||  ||||| ||||||||||||||||||| |  ||| |||||    
T  1867 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacaagtcgttcttctacttctgctcct-ttctgtccctttcggtttcgattagagcggct 1769  T
Q  236 acgcaccgtatagaatag-tttaatcaaacgattaaac 272  Q
     || |  |||| || ||| |||||||||||||||||||    
T  1768 gcgtattgtattgagtagttttaatcaaacgattaaac 1731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 13604896 - 13604948
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13604896 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattctt 13604948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 19478449 - 19478330
Alignment:
Q  139 ttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggtttcaaacagaacggcta 236  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |  | || |||  || |||||||||||||||  || ||| ||||||    
T  19478449 ttcctgtgtgattcctctcttcttccttcgacttgtgttaacgagtcattcttctacttctactcatttttgtccctttcggttttgaatagagcggcta 19478350  T
Q  237 cgcaccgtatagaatagttt 256  Q
    || ||||||| |||||||||    
T  19478349 cgtaccgtattgaatagttt 19478330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 224
Target Start/End: Complemental strand, 26981222 - 26981118
Alignment:
Q  125 tacacagttgaaacttcctgtgcgattcctctcttctccc---ttcgacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggt 219  Q
    |||||||||||  ||||||||||  ||| |||||||||||   |||||||||| || ||||||| ||||| |||| || |||  ||||||||||||||||    
T  26981222 tacacagttgatgcttcctgtgcttttcttctcttctccctttttcgacttgtcttgacgagtctttcttctctttctactcctttctgtccctttcggt 26981123  T
Q  220 ttcaa 224  Q
    |||||    
T  26981122 ttcaa 26981118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 17281358 - 17281404
Alignment:
Q  138 cttcctgtgcgattcctctcttctcccttcgacttgtgttaacgagt 184  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||||    
T  17281358 cttcctgtgcttttcctcccttctcccttcgacttgtgttaacgagt 17281404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 29325979 - 29325946
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaattaat 56  Q
    ||||||||||||||||||||||||||||||||||    
T  29325979 ttgtcacttgaaaatgataaattaattaattaat 29325946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 3902834 - 3902803
Alignment:
Q  26 tcacttgaaaatgataaattaattaattaatt 57  Q
    ||||||||||||||||||||||||||||||||    
T  3902834 tcacttgaaaatgataaattaattaattaatt 3902803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 53
Target Start/End: Complemental strand, 29326146 - 29326116
Alignment:
Q  23 ttgtcacttgaaaatgataaattaattaatt 53  Q
    |||||||||||||||||||||||||||||||    
T  29326146 ttgtcacttgaaaatgataaattaattaatt 29326116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 2759884 - 2759920
Alignment:
Q  153 ctctcttctcccttcgacttgtgttaacgagtcattc 189  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  2759884 ctctcttctcccttcggcttgtgttaacgagttattc 2759920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 49068 - 49105
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| |||||||||||||||||||    
T  49068 ttgaaaatgataaattaaataattaatttaatcattat 49105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 149566 - 149529
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| |||||||||||||||||||    
T  149566 ttgaaaatgataaattaaataattaatttaatcattat 149529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 193736 - 193838
Alignment:
Q  127 cacagttgaaacttcctgtgcgattcctctcttctcc---cttcgacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggttt 221  Q
    |||||||||  ||||||||||  ||||||||||||||   |||||||||||||| ||||||| ||||| | || || |||  |||||||||||||| |||    
T  193736 cacagttgatgcttcctgtgcttttcctctcttctcccttcttcgacttgtgttgacgagtctttcttctttttctactcctttctgtccctttcgattt 193835  T
Q  222 caa 224  Q
    |||    
T  193836 caa 193838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 3816 - 3918
Alignment:
Q  127 cacagttgaaacttcctgtgcgattcctctcttctcc---cttcgacttgtgttaacgagtcattcttttcttcctcctc--ttctgtccctttcggttt 221  Q
    |||||||||  ||||||||||  ||||||||||||||   ||||||||| |||| ||||||| ||||| | || || |||  |||||||||||||| |||    
T  3816 cacagttgatgcttcctgtgcttttcctctcttctcccttcttcgacttatgttgacgagtctttcttctttttctactcctttctgtccctttcgattt 3915  T
Q  222 caa 224  Q
    |||    
T  3916 caa 3918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 8988 - 9021
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  8988 aaatgataaattaaataattaatttaatcattat 9021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 47082 - 47115
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  47082 aaatgataaattaaataattaatttaatcattat 47115  T

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Target: scaffold0060; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 52026 - 52059
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  52026 aaatgataaattaaataattaatttaatcattat 52059  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 83886 - 83853
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  83886 aaatgataaattaaataattaatttaatcattat 83853  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 65422 - 65385
Alignment:
Q  30 ttgaaaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  65422 ttgaaaatgataaattaaataattaatttagtcattat 65385  T

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Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 81666 - 81633
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||||||||||||||| |||||||    
T  81666 aaatgataaattaattaattaatttagtcattat 81633  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 34833 - 34866
Alignment:
Q  34 aaatgataaattaattaattaatttaatcattat 67  Q
    |||||||||||||| |||||||||||||||||||    
T  34833 aaatgataaattaaataattaatttaatcattat 34866  T

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