View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9750_low_10 (Length: 312)
Name: NF9750_low_10
Description: NF9750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9750_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 7 - 294
Target Start/End: Original strand, 52103746 - 52104033
Alignment:
| Q |
7 |
tttggtgtttaaacaacaaaggtaagtattaacggctaaagaaacggtctcattcaattgtttaagggtaaagaccatgtagaatcagtttatgcagcct |
106 |
Q |
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| T |
52103746 |
tttggtgtttaaacaacaaaggtaagtattaacggctaaagaaacggtctcattcaattgtttaagggtaaagaccatgtagaatcagtttatacagcct |
52103845 |
T |
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| Q |
107 |
aagagtttgtcacatgattactatttttggctcttgttttgtggctgtgatgtaactgcatggtaagatcaaagggttgagaattgagatagttaacttc |
206 |
Q |
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| T |
52103846 |
aagagtttgtcacatgattactatttttggctcttgttttgtggctgtgatgtaactgcatggtaagatcaaagggttgagaatttagatagttaacttc |
52103945 |
T |
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| Q |
207 |
atgtattcaccattgcaacaatttatctttataaattgaccgcccatgatgtcattcaaatcaacaatgaaacttgacaaataattga |
294 |
Q |
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| T |
52103946 |
atgtattcaccattgcaacaatttatctttataaattgaccggccatgatgtcattgaaatcaacaatgaaacttgacaaataattga |
52104033 |
T |
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