View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9751_low_19 (Length: 428)

Name: NF9751_low_19
Description: NF9751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9751_low_19
NF9751_low_19
[»] chr2 (55 HSPs)
chr2 (18-428)||(10884337-10884747)
chr2 (173-234)||(13736303-13736364)
chr2 (173-240)||(9556238-9556305)
chr2 (180-250)||(1939326-1939396)
chr2 (173-219)||(9174814-9174860)
chr2 (174-223)||(3049974-3050023)
chr2 (174-223)||(9477952-9478001)
chr2 (173-240)||(22681189-22681256)
chr2 (183-250)||(34652030-34652097)
chr2 (173-279)||(13869060-13869166)
chr2 (173-278)||(1893248-1893352)
chr2 (173-250)||(32821808-32821885)
chr2 (173-250)||(33942149-33942226)
chr2 (181-222)||(36863647-36863688)
chr2 (173-218)||(39983341-39983386)
chr2 (173-221)||(938533-938581)
chr2 (183-235)||(10646298-10646350)
chr2 (174-233)||(4026817-4026876)
chr2 (171-234)||(9395127-9395190)
chr2 (177-240)||(19333329-19333392)
chr2 (176-223)||(19629365-19629412)
chr2 (176-223)||(19826266-19826313)
chr2 (180-223)||(29419867-29419910)
chr2 (173-240)||(36415677-36415744)
chr2 (190-276)||(5781685-5781771)
chr2 (181-219)||(6993749-6993787)
chr2 (174-240)||(10198484-10198550)
chr2 (173-223)||(16867738-16867788)
chr2 (173-219)||(18066127-18066173)
chr2 (173-219)||(18179265-18179311)
chr2 (181-219)||(24097815-24097853)
chr2 (181-223)||(28933831-28933873)
chr2 (173-235)||(29633072-29633134)
chr2 (174-216)||(35099627-35099669)
chr2 (181-219)||(35379041-35379079)
chr2 (182-215)||(7240621-7240654)
chr2 (173-250)||(10285859-10285936)
chr2 (174-219)||(11488277-11488322)
chr2 (178-235)||(33192206-33192263)
chr2 (173-250)||(35485916-35485993)
chr2 (174-219)||(42409328-42409373)
chr2 (171-216)||(42419994-42420039)
chr2 (174-223)||(43205309-43205358)
chr2 (174-219)||(43985028-43985073)
chr2 (174-250)||(1742026-1742102)
chr2 (176-276)||(5826219-5826319)
chr2 (183-219)||(9530753-9530789)
chr2 (174-218)||(15377765-15377809)
chr2 (175-211)||(26522658-26522694)
chr2 (171-219)||(29316800-29316848)
chr2 (183-219)||(30552669-30552705)
chr2 (174-210)||(34649322-34649358)
chr2 (174-218)||(36852472-36852516)
chr2 (175-223)||(40279408-40279456)
chr2 (173-213)||(41170602-41170642)
[»] chr8 (49 HSPs)
chr8 (173-237)||(31862492-31862556)
chr8 (174-219)||(10075576-10075621)
chr8 (176-221)||(26473775-26473820)
chr8 (176-223)||(1433550-1433597)
chr8 (160-218)||(4558781-4558842)
chr8 (173-240)||(31705084-31705151)
chr8 (174-240)||(11415154-11415220)
chr8 (173-219)||(27028830-27028876)
chr8 (174-219)||(8060669-8060714)
chr8 (173-250)||(11183544-11183621)
chr8 (174-219)||(30277270-30277315)
chr8 (173-250)||(40071748-40071825)
chr8 (180-240)||(20672756-20672816)
chr8 (175-215)||(25097387-25097427)
chr8 (173-240)||(30389098-30389165)
chr8 (173-219)||(6509328-6509374)
chr8 (173-219)||(8062328-8062374)
chr8 (174-240)||(9700001-9700067)
chr8 (173-219)||(11745677-11745723)
chr8 (173-218)||(37353275-37353320)
chr8 (173-250)||(39551203-39551280)
chr8 (183-219)||(9541021-9541057)
chr8 (171-235)||(33714245-33714309)
chr8 (171-235)||(42215315-42215379)
chr8 (173-217)||(43709272-43709316)
chr8 (181-240)||(2458570-2458629)
chr8 (173-240)||(12361191-12361258)
chr8 (174-240)||(5088852-5088918)
chr8 (173-223)||(7714241-7714291)
chr8 (173-219)||(8062523-8062569)
chr8 (173-211)||(9912822-9912860)
chr8 (174-240)||(11569461-11569527)
chr8 (181-219)||(12851183-12851221)
chr8 (173-219)||(14247249-14247295)
chr8 (173-211)||(29592206-29592244)
chr8 (174-235)||(1930035-1930096)
chr8 (174-219)||(5069697-5069742)
chr8 (174-235)||(9956823-9956884)
chr8 (181-210)||(12496685-12496714)
chr8 (173-242)||(28769341-28769410)
chr8 (173-218)||(29973080-29973125)
chr8 (174-219)||(34551120-34551165)
chr8 (177-218)||(39268530-39268571)
chr8 (171-200)||(39274533-39274562)
chr8 (183-211)||(778850-778878)
chr8 (176-204)||(18931338-18931366)
chr8 (191-219)||(23996652-23996680)
chr8 (173-217)||(30627929-30627973)
chr8 (173-205)||(34770891-34770923)
[»] chr6 (29 HSPs)
chr6 (174-240)||(6647387-6647453)
chr6 (171-240)||(4246407-4246476)
chr6 (173-240)||(31624089-31624156)
chr6 (173-219)||(281873-281919)
chr6 (173-227)||(1401108-1401162)
chr6 (173-219)||(31671099-31671145)
chr6 (174-219)||(31812038-31812083)
chr6 (174-235)||(35070476-35070537)
chr6 (171-219)||(2117400-2117448)
chr6 (173-219)||(835274-835320)
chr6 (173-219)||(1275148-1275194)
chr6 (173-211)||(3525147-3525185)
chr6 (173-219)||(4006713-4006759)
chr6 (173-223)||(7148665-7148715)
chr6 (102-148)||(7946025-7946071)
chr6 (181-223)||(8035169-8035211)
chr6 (173-219)||(9093581-9093627)
chr6 (181-279)||(27894053-27894151)
chr6 (176-213)||(13907420-13907457)
chr6 (174-223)||(20368201-20368250)
chr6 (174-223)||(25100043-25100092)
chr6 (176-209)||(31686398-31686431)
chr6 (183-223)||(2455819-2455859)
chr6 (173-205)||(2727895-2727927)
chr6 (174-250)||(5328973-5329049)
chr6 (171-219)||(7945909-7945956)
chr6 (173-205)||(14492301-14492333)
chr6 (175-223)||(21024212-21024260)
chr6 (160-219)||(24838768-24838830)
[»] chr1 (56 HSPs)
chr1 (173-219)||(25479580-25479626)
chr1 (174-240)||(39270429-39270495)
chr1 (174-219)||(51929800-51929845)
chr1 (171-219)||(7137023-7137071)
chr1 (171-219)||(7472308-7472356)
chr1 (171-223)||(35017573-35017625)
chr1 (173-232)||(7218086-7218145)
chr1 (173-240)||(10744300-10744367)
chr1 (174-225)||(45667781-45667832)
chr1 (181-219)||(37241847-37241885)
chr1 (173-219)||(44422698-44422744)
chr1 (174-219)||(5924055-5924100)
chr1 (175-240)||(10199412-10199477)
chr1 (174-219)||(13975647-13975692)
chr1 (174-223)||(33976686-33976735)
chr1 (181-249)||(3224430-3224498)
chr1 (179-215)||(29249515-29249551)
chr1 (176-232)||(34952217-34952273)
chr1 (173-240)||(23902071-23902138)
chr1 (173-240)||(31517744-31517811)
chr1 (173-240)||(37842359-37842426)
chr1 (173-219)||(4700091-4700137)
chr1 (201-279)||(5276320-5276398)
chr1 (183-217)||(6279408-6279442)
chr1 (174-240)||(11639420-11639486)
chr1 (173-223)||(24915072-24915122)
chr1 (173-215)||(25005826-25005868)
chr1 (173-223)||(26779946-26779996)
chr1 (174-240)||(27140478-27140544)
chr1 (173-223)||(31294542-31294592)
chr1 (171-213)||(33527178-33527220)
chr1 (173-219)||(34290235-34290281)
chr1 (181-219)||(35350643-35350681)
chr1 (174-240)||(37240842-37240908)
chr1 (181-219)||(38651456-38651494)
chr1 (177-235)||(45975693-45975751)
chr1 (181-219)||(49888774-49888812)
chr1 (181-211)||(50319277-50319307)
chr1 (175-279)||(1509930-1510035)
chr1 (173-242)||(6659513-6659582)
chr1 (174-219)||(15558217-15558262)
chr1 (174-223)||(23407431-23407480)
chr1 (174-235)||(35179139-35179200)
chr1 (174-223)||(38882933-38882981)
chr1 (116-161)||(43112826-43112871)
chr1 (174-223)||(49938747-49938796)
chr1 (180-221)||(52013904-52013945)
chr1 (176-240)||(1565539-1565603)
chr1 (171-219)||(4078174-4078222)
chr1 (175-219)||(4548722-4548766)
chr1 (176-240)||(37811854-37811918)
chr1 (182-218)||(43722184-43722220)
chr1 (182-222)||(47020515-47020555)
chr1 (175-211)||(47598454-47598490)
chr1 (174-214)||(51256853-51256893)
chr1 (175-219)||(51929724-51929768)
[»] chr4 (40 HSPs)
chr4 (174-250)||(11264301-11264377)
chr4 (173-223)||(35571652-35571702)
chr4 (174-250)||(2996573-2996649)
chr4 (174-234)||(47800623-47800683)
chr4 (174-246)||(53673656-53673728)
chr4 (171-250)||(6466040-6466119)
chr4 (106-211)||(42865997-42866105)
chr4 (173-219)||(29601033-29601079)
chr4 (173-279)||(42121487-42121592)
chr4 (181-223)||(50742857-50742899)
chr4 (173-222)||(1706621-1706670)
chr4 (174-235)||(27721717-27721778)
chr4 (181-218)||(51044506-51044543)
chr4 (174-223)||(52259631-52259680)
chr4 (176-240)||(55084485-55084549)
chr4 (174-218)||(56480348-56480392)
chr4 (171-218)||(1137709-1137756)
chr4 (173-240)||(7694014-7694081)
chr4 (173-216)||(12650312-12650355)
chr4 (171-210)||(17883527-17883566)
chr4 (173-219)||(2900339-2900385)
chr4 (181-223)||(15132347-15132389)
chr4 (173-219)||(16200006-16200052)
chr4 (173-219)||(17822890-17822936)
chr4 (174-240)||(21952655-21952721)
chr4 (181-223)||(24169270-24169312)
chr4 (173-219)||(36048532-36048578)
chr4 (177-223)||(44319952-44319998)
chr4 (173-234)||(6978972-6979033)
chr4 (181-218)||(8468955-8468992)
chr4 (174-223)||(10192284-10192332)
chr4 (174-219)||(11158382-11158427)
chr4 (175-248)||(29263371-29263444)
chr4 (181-218)||(39063673-39063710)
chr4 (174-211)||(49893315-49893352)
chr4 (173-246)||(53315325-53315398)
chr4 (174-218)||(6360739-6360783)
chr4 (175-219)||(27321854-27321898)
chr4 (176-248)||(30066762-30066834)
chr4 (173-233)||(30207582-30207642)
[»] chr5 (45 HSPs)
chr5 (174-217)||(3237093-3237136)
chr5 (174-240)||(41957455-41957521)
chr5 (175-240)||(17258887-17258952)
chr5 (175-235)||(4014433-4014493)
chr5 (174-274)||(11684414-11684513)
chr5 (171-250)||(17368673-17368752)
chr5 (171-218)||(30217079-30217126)
chr5 (177-240)||(36638750-36638813)
chr5 (173-219)||(6593298-6593344)
chr5 (173-223)||(12425570-12425620)
chr5 (173-279)||(25461281-25461387)
chr5 (155-223)||(3951593-3951664)
chr5 (174-227)||(7319025-7319078)
chr5 (174-223)||(14182402-14182450)
chr5 (173-218)||(16889734-16889779)
chr5 (173-234)||(25705669-25705730)
chr5 (174-214)||(18543226-18543266)
chr5 (174-234)||(32197720-32197780)
chr5 (173-221)||(36542305-36542353)
chr5 (160-211)||(38047888-38047942)
chr5 (171-219)||(38104882-38104929)
chr5 (181-217)||(40731476-40731512)
chr5 (176-223)||(13604870-13604917)
chr5 (173-248)||(15308989-15309064)
chr5 (173-216)||(29201532-29201575)
chr5 (173-219)||(2568657-2568703)
chr5 (173-235)||(7984968-7985030)
chr5 (174-240)||(11615501-11615567)
chr5 (173-219)||(28776992-28777038)
chr5 (173-215)||(32942617-32942659)
chr5 (173-223)||(33533560-33533610)
chr5 (173-219)||(39105463-39105509)
chr5 (174-228)||(40534199-40534253)
chr5 (108-161)||(3255752-3255805)
chr5 (174-219)||(3947581-3947626)
chr5 (174-219)||(10771913-10771958)
chr5 (174-219)||(11707055-11707100)
chr5 (173-218)||(15003540-15003585)
chr5 (174-223)||(18875361-18875410)
chr5 (173-234)||(37588370-37588431)
chr5 (171-219)||(3970705-3970753)
chr5 (176-240)||(21768201-21768265)
chr5 (171-219)||(29844972-29845020)
chr5 (160-219)||(32408617-32408679)
chr5 (176-240)||(40205078-40205142)
[»] chr3 (46 HSPs)
chr3 (171-250)||(3044253-3044332)
chr3 (175-222)||(24158525-24158572)
chr3 (173-223)||(24280710-24280760)
chr3 (196-278)||(25925764-25925846)
chr3 (174-223)||(39602231-39602280)
chr3 (176-219)||(21335677-21335720)
chr3 (173-220)||(47319295-47319342)
chr3 (174-240)||(1217804-1217870)
chr3 (173-227)||(2719467-2719521)
chr3 (176-222)||(6801855-6801901)
chr3 (173-219)||(20502093-20502139)
chr3 (174-240)||(20669172-20669238)
chr3 (173-219)||(34924563-34924609)
chr3 (174-219)||(4013504-4013549)
chr3 (174-235)||(41644454-41644515)
chr3 (171-219)||(24785202-24785250)
chr3 (171-218)||(22203427-22203474)
chr3 (173-240)||(22214663-22214730)
chr3 (181-240)||(36646386-36646445)
chr3 (175-250)||(37273135-37273210)
chr3 (176-223)||(45535239-45535286)
chr3 (174-240)||(237397-237463)
chr3 (185-219)||(6483812-6483846)
chr3 (174-232)||(21367667-21367725)
chr3 (177-211)||(24887316-24887350)
chr3 (181-223)||(25170815-25170856)
chr3 (173-235)||(28622008-28622070)
chr3 (185-223)||(32064450-32064488)
chr3 (173-219)||(38462280-38462326)
chr3 (174-240)||(40665429-40665495)
chr3 (176-250)||(41452525-41452599)
chr3 (173-219)||(44747433-44747479)
chr3 (174-219)||(1816583-1816628)
chr3 (174-219)||(25075066-25075111)
chr3 (171-240)||(30573918-30573987)
chr3 (177-250)||(31010405-31010478)
chr3 (173-218)||(46886718-46886763)
chr3 (183-219)||(2825156-2825192)
chr3 (173-209)||(11253501-11253536)
chr3 (183-223)||(16790407-16790447)
chr3 (173-209)||(20874339-20874375)
chr3 (186-218)||(24785273-24785305)
chr3 (173-213)||(25964442-25964482)
chr3 (175-219)||(41633361-41633405)
chr3 (174-234)||(52412914-52412974)
chr3 (174-250)||(54775127-54775203)
[»] chr7 (45 HSPs)
chr7 (178-235)||(529379-529436)
chr7 (173-210)||(28340878-28340915)
chr7 (174-223)||(44821959-44822008)
chr7 (172-223)||(25596031-25596082)
chr7 (173-240)||(38010713-38010780)
chr7 (173-219)||(514766-514812)
chr7 (171-217)||(1350269-1350315)
chr7 (174-240)||(6601367-6601433)
chr7 (173-219)||(21453293-21453339)
chr7 (173-235)||(39967919-39967981)
chr7 (173-223)||(40530430-40530480)
chr7 (174-219)||(5628591-5628636)
chr7 (173-250)||(39771760-39771837)
chr7 (175-219)||(7521273-7521317)
chr7 (174-218)||(30723065-30723109)
chr7 (160-219)||(40689011-40689073)
chr7 (174-249)||(4966156-4966231)
chr7 (174-213)||(18350738-18350777)
chr7 (171-250)||(30535560-30535639)
chr7 (174-221)||(39542323-39542370)
chr7 (171-218)||(47941320-47941367)
chr7 (176-219)||(48917371-48917414)
chr7 (173-219)||(2825256-2825302)
chr7 (174-240)||(18749821-18749887)
chr7 (174-240)||(24363605-24363671)
chr7 (180-218)||(27378854-27378892)
chr7 (173-235)||(28165090-28165152)
chr7 (173-219)||(30812147-30812193)
chr7 (181-219)||(33552875-33552913)
chr7 (173-223)||(33678779-33678829)
chr7 (173-219)||(46104592-46104638)
chr7 (174-228)||(47130801-47130855)
chr7 (173-214)||(5369722-5369762)
chr7 (173-218)||(12110359-12110404)
chr7 (181-218)||(28691861-28691898)
chr7 (174-219)||(39334193-39334238)
chr7 (174-223)||(43648240-43648289)
chr7 (174-222)||(3468614-3468662)
chr7 (174-218)||(3968783-3968827)
chr7 (177-217)||(11753051-11753091)
chr7 (175-219)||(12792588-12792632)
chr7 (109-161)||(27481432-27481484)
chr7 (174-218)||(29363518-29363562)
chr7 (171-211)||(39169449-39169488)
chr7 (180-219)||(47354114-47354154)
[»] scaffold0020 (1 HSPs)
scaffold0020 (174-234)||(159983-160043)
[»] scaffold0003 (1 HSPs)
scaffold0003 (181-235)||(306333-306387)
[»] scaffold0159 (1 HSPs)
scaffold0159 (190-276)||(27017-27103)


Alignment Details
Target: chr2 (Bit Score: 399; Significance: 0; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 18 - 428
Target Start/End: Complemental strand, 10884747 - 10884337
Alignment:
Q  18 gttgtgatttttctattgatatttcaaagcagttattttaatttggtttattttcatgcaaataattgttttgcttgatatatgttaagccctgtttgga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10884747 gttgtgatttttctattgatatttcaaagcagttattttaatttggtttattttcatgcaaataattgttttgcttgatttatgttaagccctgtttgga 10884648  T
Q  118 taaacaacctaattagtagcttttagcataaatgcttatcatattattttcatatctataagctgttttcataagctatcctagagagcttatgaaaata 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10884647 taaacaacctaattagtagcttttagcataaatgcttatcatattattttcatatctataagctgttttcataagctatcctagagagcttatgaaaata 10884548  T
Q  218 agttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgcttatgttgatagataaaagaaaactgactgcagtattttgatta 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10884547 agttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgcttatgttgatagataaaagaaaactgactgcagtattttgatta 10884448  T
Q  318 acctcattgttccttagtgcttcagtgggctaataggagattcacttgttagttgaacttctagtgactgtatcttatgttctatctcatccaagtttat 417  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10884447 acctcattgttccttagtgcttcagtaggctaataggagattcacttgttagttgaacttctagtgactgaatcttatgttctatctcatccaagtttat 10884348  T
Q  418 ttccactttca 428  Q
    |||||||||||    
T  10884347 ttccactttca 10884337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 13736364 - 13736303
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttat 234  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| ||||||    
T  13736364 ctataagctgttttcataagctatactagagagcttatgaaaataacttgaaaacagcttat 13736303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 9556238 - 9556305
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||| | || |||||| ||||    
T  9556238 ctataaactgttttcataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacat 9556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 1939396 - 1939326
Alignment:
Q  180 ctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||| ||||||| |||| | |||||||    
T  1939396 ctgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagtt 1939326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 9174814 - 9174860
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  9174814 ctataagctgttttcataagctatcttacagagcttatgaaaataag 9174860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 3049974 - 3050023
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||||||||||||||||||||| | ||||||||||||||||| |||||    
T  3049974 tataagctgttttcataagctatcatggagagcttatgaaaatatgttga 3050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 9477952 - 9478001
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  9477952 tataagttgttttcataagctatcctggagaggttatgaaaataagttga 9478001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 22681256 - 22681189
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||| | | ||| ||||||| ||||    
T  22681256 ctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacat 22681189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 34652097 - 34652030
Alignment:
Q  183 ttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||||||||||| | ||||||||||| ||||||||||| ||| ||||||| |||| | |||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagtt 34652030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 13869166 - 13869060
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtg 272  Q
    |||||||||||||||||||| |||||| |||| || |||||||||| |||| |||  |||||  || | | ||||||| | | ||| ||||||| |||||    
T  13869166 ctataagctgttttcataagttatcctggagaactaatgaaaataatttgaaaacaacttatagacttgtcataagttctctcaaatagtctcataagtg 13869067  T
Q  273 cttatgt 279  Q
    |||||||    
T  13869066 cttatgt 13869060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 278
Target Start/End: Complemental strand, 1893352 - 1893248
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtg 272  Q
    |||||||||||||||  |||||||| | |||| ||| |||||||||| ||| ||   |||||| |||| | ||||||||| | ||||||||| |||||||    
T  1893352 ctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaataacttatgtacatgtcataagttttctcaaacagtct-acaagtg 1893254  T
Q  273 cttatg 278  Q
    ||||||    
T  1893253 cttatg 1893248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 32821808 - 32821885
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||| ||||||||||||||||||||| |||||||||  ||||||  ||| ||| ||||||| |||| | |||||||    
T  32821808 ctataaactgttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagtt 32821885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 33942149 - 33942226
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||| ||||||||||||| ||| ||||||||| |||||||| || ||| ||| ||||||| |||| | |||||||    
T  33942149 ctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgtcataagtt 33942226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 36863688 - 36863647
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttg 222  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  36863688 tgttttcataagctatcttggagagcttatgaaaataagttg 36863647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 39983341 - 39983386
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  39983341 ctataagttgttttcataagctatcctggagagctaatgaaaataa 39983386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 938581 - 938533
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagtt 221  Q
    |||||||| || ||||||||||||| |||||||||| ||||||||||||    
T  938581 ctataagcggtattcataagctatcttagagagcttctgaaaataagtt 938533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 10646350 - 10646298
Alignment:
Q  183 ttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||||||||  |||||| |||||||||||||| ||| |||||||||||    
T  10646350 ttttcataagctattttagagaacttatgaaaataagatgaaaactgcttatg 10646298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 4026817 - 4026876
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgctta 233  Q
    ||||||||||||||||||  ||||||  ||| |||||||||||||| ||| |||||||||    
T  4026817 tataagctgttttcataaattatcctgaagaacttatgaaaataagctgaaaactgctta 4026876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 9395127 - 9395190
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttat 234  Q
    ||||||||||||||||||| || ||| ||  |||||||||||||||||| ||| ||| ||||||    
T  9395127 atctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaacagcttat 9395190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 19333392 - 19333329
Alignment:
Q  177 aagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||| ||| ||||  | ||||||||||||||||||| ||||||| ||||||| ||||    
T  19333392 aagctgttttcttaaactatattggagagcttatgaaaataagctgagaacagcttatgaacat 19333329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 19629365 - 19629412
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||| |||||||||||||||| || ||||| |||||||||||||||||    
T  19629365 taagatgttttcataagctatactggagagtttatgaaaataagttga 19629412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 19826266 - 19826313
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||| |||||||||||||||| || ||||| |||||||||||||||||    
T  19826266 taagatgttttcataagctatactggagagtttatgaaaataagttga 19826313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 29419867 - 29419910
Alignment:
Q  180 ctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||    
T  29419867 ctgttttcatatgctatcctagagagtttatggaaataagttga 29419910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 36415744 - 36415677
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||||||||||| |  ||| |||| ||||||||| ||| |||  |||||||||||    
T  36415744 ctataagctgttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatgcacat 36415677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 5781685 - 5781771
Alignment:
Q  190 aagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgctta 276  Q
    |||||||| ||||||||||||| ||||||| ||| ||| | |||||||||| | ||||| | |   ||||||| |||||||||||||    
T  5781685 aagctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataagctctcgcaaacagtgtcacaagtgctta 5781771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 6993787 - 6993749
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||| || |||||||||||||||||||    
T  6993787 tgttttcataagctatgcttgagagcttatgaaaataag 6993749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 10198550 - 10198484
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||| |||||||| |||| ||||||||||||| ||||| ||||||| ||| ||| ||||||| ||||    
T  10198550 tataggctgtttttataatctatcctagagagattatggaaataagctgacaacagcttatgaacat 10198484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 16867738 - 16867788
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| |||||||| |||||||| | ||||||||||| |||||||||||    
T  16867738 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttga 16867788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 18066127 - 18066173
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||| | |||| |||| |||||||||    
T  18066127 ctataagctgttttcataagctatcttggagaacttaagaaaataag 18066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 18179311 - 18179265
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||| |||||||||||||||| |||| |||| |||||||||    
T  18179311 ctataagctgctttcataagctatcctggagaacttacgaaaataag 18179265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 24097815 - 24097853
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  24097815 tgttttcataagttatcctggagagcttatgaaaataag 24097853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 28933831 - 28933873
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||||||||||||||| ||  |||||||||||    
T  28933831 tgttttcataagctatcctagagagctgatagaaataagttga 28933873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 29633072 - 29633134
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||| |||||||||||||||||| | ||||||| |||||| | ||| ||| |||||||    
T  29633072 ctataagctcttttcataagctatcctaaatagcttatcaaaatatgctgaaaacagcttatg 29633134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 35099669 - 35099627
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaat 216  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||    
T  35099669 tataagctgctttcataagctatccttgagagcttatggaaat 35099627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 35379079 - 35379041
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataag 35379041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 7240621 - 7240654
Alignment:
Q  182 gttttcataagctatcctagagagcttatgaaaa 215  Q
    ||||||||||||||||||||| ||||||||||||    
T  7240621 gttttcataagctatcctagatagcttatgaaaa 7240654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 10285859 - 10285936
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||||  |||| ||||||||| | |||||| |||||| ||||||||||| ||| ||||||| |||| | |||||||    
T  10285859 ctataagtcgtttgcataagctaacatagagaacttatggaaataagttgaaaacagcttatggacatgtcataagtt 10285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 11488277 - 11488322
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||| |||||||||||||||| ||||| ||||| |||||||    
T  11488277 tataagctgctttcataagctatcctggagagattatgcaaataag 11488322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 33192206 - 33192263
Alignment:
Q  178 agctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||| |||||||||||||||| |||||||||| || ||||| ||| ||| |||||||    
T  33192206 agctggtttcataagctatcctggagagcttataaatataagctgaaaacagcttatg 33192263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 35485916 - 35485993
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||| |||||| ||||||||||||  ||||| |||| |||| || ||| ||| ||||||| |||||| |||||||    
T  35485916 ctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatatcataagtt 35485993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 42409373 - 42409328
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||| ||||||||||||| ||| || |||||||||||||||||||    
T  42409373 tataaactgttttcataagttattctggagagcttatgaaaataag 42409328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 42419994 - 42420039
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaat 216  Q
    ||||||||||| ||||||||||||||||| || |||||||| ||||    
T  42419994 atctataagctattttcataagctatcctggatagcttatggaaat 42420039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 43205309 - 43205358
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||| ||||||||||||||||||   ||||||||||| |||||||||||    
T  43205309 tataatctgttttcataagctatcacggagagcttatggaaataagttga 43205358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 43985073 - 43985028
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| ||||||||||||||||| |  ||||||||||||||||||    
T  43985073 tataagttgttttcataagctatcttgaagagcttatgaaaataag 43985028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 1742102 - 1742026
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||||||||||||||| ||||| |  |||| ||||| |||||||||||  |  |||||||||||| | |||||||    
T  1742102 tataagctgttttcataatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagtt 1742026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 276
Target Start/End: Original strand, 5826219 - 5826319
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgctt 275  Q
    |||| |||||||| || ||||| ||||||||||| | ||||||| ||| ||| | |||||||||| | ||||| | |   ||||||| ||||||||||||    
T  5826219 taagttgttttcaaaaactatcatagagagcttacgtaaataagctgaaaacagtttatgcacatgtcataagctctcgcaaacagtgtcacaagtgctt 5826318  T
Q  276 a 276  Q
    |    
T  5826319 a 5826319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 9530789 - 9530753
Alignment:
Q  183 ttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  9530789 ttttcataagctatcctggagagcttatgaaagtaag 9530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 15377765 - 15377809
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||||||||||||||||||| ||   ||||||||||||||||    
T  15377765 tataagctgttttcataagctattctgaggagcttatgaaaataa 15377809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 26522694 - 26522658
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatg 211  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  26522694 ataagctattttcataagctatcctagaaagcttatg 26522658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 29316848 - 29316800
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||| ||||||| | |||| |||||| |||||||    
T  29316848 atctataagctgttttcatcagctatcttggagaacttatggaaataag 29316800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 30552705 - 30552669
Alignment:
Q  183 ttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  30552705 ttttcataaactatcctagagagcttatggaaataag 30552669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 34649358 - 34649322
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttat 210  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  34649358 tataagttgttttcataagccatcctagagagcttat 34649322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 36852472 - 36852516
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||| |||||||||||||||||| | ||||||||||| ||||||    
T  36852472 tataaactgttttcataagctatcttggagagcttatggaaataa 36852516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 40279408 - 40279456
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||| ||||||||||||||||  | |||| ||||||||||||||||||    
T  40279408 ataagttgttttcataagctatattggagaacttatgaaaataagttga 40279456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 41170602 - 41170642
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaa 213  Q
    |||||||||||||||||| |||||| | |||||||||||||    
T  41170602 ctataagctgttttcatatgctatcatggagagcttatgaa 41170642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 31862492 - 31862556
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgca 237  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||| |||||||||    
T  31862492 ctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgca 31862556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 10075621 - 10075576
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  10075621 tataagctattttcataagctatcctagagagcttatgaaaataag 10075576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 26473820 - 26473775
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagtt 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  26473820 taagttgttttcataagctatcctagagagcttatgaaaataagtt 26473775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 1433550 - 1433597
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  1433550 taagcagttttcataagctatcctggagagcttatgaaaataagttga 1433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 4558781 - 4558842
Alignment:
Q  160 attattttcatat---ctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||||   ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  4558781 attattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaataa 4558842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 31705084 - 31705151
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||||| |||| ||||| ||||| ||||||| ||| ||| ||||||||||||    
T  31705084 ctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatgcacat 31705151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 11415154 - 11415220
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||| ||||||||||||||||||||||||||| || |||||||||| ||||||  ||||||| ||||    
T  11415154 tatacgctgttttcataagctatcctagagagtttgtgaaaataagctgagaatagcttatggacat 11415220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 27028830 - 27028876
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaataag 27028876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 8060669 - 8060714
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  8060669 tataagctgttttcataagcaatcctagagagcttatggaaataag 8060714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 11183544 - 11183621
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||||||||||||| |||||| ||| ||||||||||| ||||||| ||| ||| ||||||  |||||| |||||||    
T  11183544 ctataagctgttttcacaagctaccctggagagcttatggaaataagctgaaaacagcttatagacatatcataagtt 11183621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 30277315 - 30277270
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataag 30277270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 40071748 - 40071825
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||| |||||| | ||| ||||| |||| | |||||||    
T  40071748 ctataaactgttttcagaagctatcctagaaagcttatgaaaattagttgaaagctgattatgaacatgtcataagtt 40071825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 20672756 - 20672816
Alignment:
Q  180 ctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||| ||| ||||||| ||||    
T  20672756 ctgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacat 20672816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 25097387 - 25097427
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaa 215  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  25097387 ataagctgttttcataagctatcctggagagcttatgaaaa 25097427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 30389098 - 30389165
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||| ||| |||  |||||| ||||    
T  30389098 ctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacat 30389165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 6509374 - 6509328
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||    
T  6509374 ctataagctgttttcataagctatcctggagagcttattgaaataag 6509328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 8062328 - 8062374
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  8062328 ctataagctgttttcataagctatcttagagagattatggaaataag 8062374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 9700001 - 9700067
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||| | ||| | |||||||||||||||||||| ||| ||| ||||||| ||||    
T  9700001 tataagctgttttcatatgttattcaagagagcttatgaaaataaggtgaaaacagcttatggacat 9700067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 11745723 - 11745677
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||| |||||||||||||| |||||||||||| ||||    
T  11745723 ctataagctgtttttataagctatcctagtgagcttatgaaactaag 11745677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 37353320 - 37353275
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||    
T  37353320 ctataagctgttttcttaagctatctttgagagcttatgaaaataa 37353275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 39551280 - 39551203
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||| |||||||||||||| |||| |||||||||| |||||||||| | ||| |||| || |||| | |||||||    
T  39551280 ctataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagtt 39551203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 9541057 - 9541021
Alignment:
Q  183 ttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||||||||||| ||||||||||    
T  9541057 ttttcataagctatcctagagagcttttgaaaataag 9541021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 33714309 - 33714245
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||||| |||||||||||||||   |||||||||| |||||||| ||| ||| |||||||    
T  33714309 atctataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatg 33714245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 42215379 - 42215315
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    |||||||| || |||||||| |||||||| ||||||||||| ||||||| ||| ||| |||||||    
T  42215379 atctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatg 42215315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 43709272 - 43709316
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaata 217  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||    
T  43709272 ctataagttgttttcatgagctatcctggagagcttatgaaaata 43709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 2458629 - 2458570
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||| ||||||||||||||||||||||||| ||||||  ||| ||| ||||||| ||||    
T  2458629 tgtttacataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacat 2458570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 12361191 - 12361258
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||| ||| |  ||||||| ||| ||||||||||| ||| ||||||| ||||    
T  12361191 ctataagctgttttcataagttattcaggagagctaatggaaataagttgaaaacagcttatggacat 12361258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 5088852 - 5088918
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||| |||||||| |||| ||||| ||||||||||  ||||||||||| ||| ||||||| ||||    
T  5088852 tataagttgttttcacaagcgatcctggagagcttattgaaataagttgaaaacagcttatggacat 5088918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 7714241 - 7714291
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| ||||||||| ||||||| | ||||||| |||||||||||||||    
T  7714241 ctataagttgttttcatgagctatcttggagagctcatgaaaataagttga 7714291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 8062523 - 8062569
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||| |||| |||||||||||| ||||||| |||||||||||||    
T  8062523 ctataagatgttctcataagctatcttagagagtttatgaaaataag 8062569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 9912860 - 9912822
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatg 211  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  9912860 ctataagctgttttcctaagctatcctggagagcttatg 9912822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 11569527 - 11569461
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||||||| | ||||| || |||||||||| ||| |||  |||||| ||||    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacat 11569461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 12851183 - 12851221
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  12851183 tgttttcataagctttccttgagagcttatgaaaataag 12851221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 14247295 - 14247249
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||| |||| |||| |||||| ||||||||||||||    
T  14247295 ctataagctgttttcgtaagatatcgtagagaacttatgaaaataag 14247249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 29592244 - 29592206
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatg 211  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  29592244 ctataatctgttttcataagctatcccagagagcttatg 29592206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 1930035 - 1930096
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    |||||||||||||||||||||||| | | || ||| |||||||||| ||| ||| |||||||    
T  1930035 tataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatg 1930096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 5069697 - 5069742
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||| |||| | || ||||||||||||||||    
T  5069697 tataagctgttttcataagatatcttcgaaagcttatgaaaataag 5069742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 9956884 - 9956823
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    |||||| ||||||||||| ||||| | |||| |||||||||||||| ||| |||| ||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatg 9956823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 12496685 - 12496714
Alignment:
Q  181 tgttttcataagctatcctagagagcttat 210  Q
    ||||||||||||||||||||||||||||||    
T  12496685 tgttttcataagctatcctagagagcttat 12496714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 28769410 - 28769341
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatat 242  Q
    ||||||||||||||||||||||||  | ||||| ||||| ||||||| ||| |||  |||||| ||||||    
T  28769410 ctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacatat 28769341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 29973080 - 29973125
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||| ||||||||||||||||||| ||||| ||||| ||||||    
T  29973080 ctataagttgttttcataagctatccttgagagtttatggaaataa 29973125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 34551120 - 34551165
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| ||||||| |||| |||||| |||||||||||||||||||    
T  34551120 tataagttgttttcttaagttatcctggagagcttatgaaaataag 34551165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 39268571 - 39268530
Alignment:
Q  177 aagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||||||||| | |||||||||||||| ||||||    
T  39268571 aagctgttttcataagcttttctagagagcttatggaaataa 39268530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 39274533 - 39274562
Alignment:
Q  171 atctataagctgttttcataagctatccta 200  Q
    ||||||||||||||||||||||||||||||    
T  39274533 atctataagctgttttcataagctatccta 39274562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 211
Target Start/End: Complemental strand, 778878 - 778850
Alignment:
Q  183 ttttcataagctatcctagagagcttatg 211  Q
    |||||||||||||||||||||||||||||    
T  778878 ttttcataagctatcctagagagcttatg 778850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 18931366 - 18931338
Alignment:
Q  176 taagctgttttcataagctatcctagaga 204  Q
    |||||||||||||||||||||||||||||    
T  18931366 taagctgttttcataagctatcctagaga 18931338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 219
Target Start/End: Complemental strand, 23996680 - 23996652
Alignment:
Q  191 agctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||||||||||||||    
T  23996680 agctatcctagagagcttatgaaaataag 23996652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 30627973 - 30627929
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaata 217  Q
    ||||||| |||||||||||| |||| ||||||||||||| |||||    
T  30627973 ctataagttgttttcataagttatcttagagagcttatggaaata 30627929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 34770891 - 34770923
Alignment:
Q  173 ctataagctgttttcataagctatcctagagag 205  Q
    ||||||| |||||||||||||||||||||||||    
T  34770891 ctataagttgttttcataagctatcctagagag 34770923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 6647387 - 6647453
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||  |||||| ||||    
T  6647387 tataatctgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacat 6647453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 4246407 - 4246476
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||||||||||||  | |||||| ||| |||||||||||| ||| ||||||| ||||    
T  4246407 atctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacat 4246476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 31624089 - 31624156
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||| |||||| | ||||  ||||||||||||||||| ||| ||||||| ||||    
T  31624089 ctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacat 31624156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 281919 - 281873
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  281919 ctataagctgtgttcataagctatcctagagagctcatggaaataag 281873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 1401108 - 1401162
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaac 227  Q
    ||||||||||||||||||||||||| | ||||||||||| | ||||| |||||||    
T  1401108 ctataagctgttttcataagctatcatggagagcttatggagataagctgagaac 1401162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 31671145 - 31671099
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  31671145 ctataagctgttttcgtaaactatcctagatagcttatgaaaataag 31671099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 31812083 - 31812038
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| ||||||||||||||||| | |||||||||||||||||||    
T  31812083 tataagttgttttcataagctatcttggagagcttatgaaaataag 31812038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 35070537 - 35070476
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    |||||||||||||  ||||||||  | ||||||||||||||||||||||| ||| |||||||    
T  35070537 tataagctgtttttgtaagctatgtttgagagcttatgaaaataagttgaaaacagcttatg 35070476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 2117400 - 2117448
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||| |||||||||||| |||||||||||||||||  |||||||    
T  2117400 atctataagttgttttcataagttatcctagagagcttattgaaataag 2117448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 835320 - 835274
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||| |||||||||||||||| | |||| ||||||||||||||    
T  835320 ctataagcagttttcataagctatcttggagaacttatgaaaataag 835274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 1275148 - 1275194
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||| | |||||| ||||||||||| |||||||    
T  1275148 ctataagctgttttcatatgttatcctggagagcttatggaaataag 1275194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 3525147 - 3525185
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatg 211  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  3525147 ctataagctgtttttatatgctatcctagagagcttatg 3525185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 4006713 - 4006759
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||| ||||||||||||||||||  ||||| |||||||||||||    
T  4006713 ctataagttgttttcataagctatccctgagaggttatgaaaataag 4006759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 7148665 - 7148715
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| | |||| |||||||| ||| |||||||||||||||||||||||    
T  7148665 ctataaggtattttaataagctaccctggagagcttatgaaaataagttga 7148715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 7946071 - 7946025
Alignment:
Q  102 ttaagccctgtttggataaacaacctaattagtagcttttagcataa 148  Q
    |||||||||||||||||||||||| || || ||||||| ||||||||    
T  7946071 ttaagccctgtttggataaacaacttattttgtagcttatagcataa 7946025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 8035211 - 8035169
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||||||||| ||||||||| |||||| |||||||||||||    
T  8035211 tgttttcataagttatcctagaaagcttacgaaaataagttga 8035169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 9093627 - 9093581
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||||||| || |||||| |||| |||||||||    
T  9093627 ctataagctgttttcataagctgtcttagagaacttaagaaaataag 9093581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 27894053 - 27894151
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgcttatgt 279  Q
    |||||||||||| |||| |  | |||||||||||||||| ||| ||| | ||||| |||||| ||||| |   | |||||||||||||||| |||||||    
T  27894053 tgttttcataagatatcttgaaaagcttatgaaaataagctgaaaacagtttatggacatatcataagctcgttcaaacagtctcacaagtacttatgt 27894151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 13907420 - 13907457
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaa 213  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  13907420 taagttgttttcataagctatcctaaagagcttatgaa 13907457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 20368250 - 20368201
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||| |||||||||||||| || | |||| ||||||||||||||||||    
T  20368250 tataagttgttttcataagctttcttggagaacttatgaaaataagttga 20368201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 25100043 - 25100092
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||| ||||||||||||||||| || |||||||||  |||||||||||    
T  25100043 tataagttgttttcataagctatcttaaagagcttatagaaataagttga 25100092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 31686431 - 31686398
Alignment:
Q  176 taagctgttttcataagctatcctagagagctta 209  Q
    |||||||||||||||||||||||| |||||||||    
T  31686431 taagctgttttcataagctatcctggagagctta 31686398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 2455819 - 2455859
Alignment:
Q  183 ttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||| | ||||||||||| |||||||||||    
T  2455819 ttttcataagctatcttggagagcttatggaaataagttga 2455859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 2727927 - 2727895
Alignment:
Q  173 ctataagctgttttcataagctatcctagagag 205  Q
    ||||||| |||||||||||||||||||||||||    
T  2727927 ctataagttgttttcataagctatcctagagag 2727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 5328973 - 5329049
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||||||||||| |||| |||| | ||||| ||||||||||||| ||| | | ||||||| |||||  |||||||    
T  5328973 tataagctgttttcgtaagttatcatggagagtttatgaaaataagatgaaagcagcttatggacataacataagtt 5329049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 7945956 - 7945909
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  7945956 atctataacctgttttcata-gctatcctggagagcttatggaaataag 7945909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 14492301 - 14492333
Alignment:
Q  173 ctataagctgttttcataagctatcctagagag 205  Q
    |||||||||||||||||||| ||||||||||||    
T  14492301 ctataagctgttttcataagttatcctagagag 14492333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 21024212 - 21024260
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| ||||||||  ||||||| |||| ||||||||||||||||||    
T  21024212 ataagctattttcatatactatcctcgagaacttatgaaaataagttga 21024260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 24838830 - 24838768
Alignment:
Q  160 attattttcatat---ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||   |||||||||| |||||||||||||| | ||||||||||  |||||||    
T  24838830 attattttcatataagctataagctgatttcataagctatcatggagagcttatagaaataag 24838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 25479580 - 25479626
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  25479580 ctataagttgttttcataagctatcctagagagcttatgaaaataag 25479626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 39270495 - 39270429
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||| ||| ||||||| ||||    
T  39270495 tataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacat 39270429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 51929845 - 51929800
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||    
T  51929845 tataagctgttttcataagctattctagagagcttatggaaataag 51929800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 7137071 - 7137023
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  7137071 atctataagctgttttcataagctatcttggagaacttatgaaaataag 7137023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 7472308 - 7472356
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  7472308 atctataagctgtttccataagctatcttggagagcttatgaaaataag 7472356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 35017573 - 35017625
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| |||||||||||||||| |||| ||||||||||| |||||||||||    
T  35017573 atctatatgctgttttcataagctgtcctggagagcttatggaaataagttga 35017625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 7218145 - 7218086
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgctt 232  Q
    ||||||| ||||||||||| ||||||| |||| |||||||||||||||||| ||| ||||    
T  7218145 ctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagctt 7218086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 10744300 - 10744367
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||||| || |||||| ||||| |||||||| ||| ||| ||||||| ||||    
T  10744300 ctataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacat 10744367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 45667832 - 45667781
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgaga 225  Q
    |||||| | ||||| ||||||||||| |||||||||||||||||||||||||    
T  45667832 tataagatattttcttaagctatcctggagagcttatgaaaataagttgaga 45667781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 37241885 - 37241847
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  37241885 tgttttcataagatatcctagagagcttatgaaaataag 37241847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 44422698 - 44422744
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||    
T  44422698 ctataagctatttttataagctatcctggagagcttatgaaaataag 44422744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 5924055 - 5924100
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||    
T  5924055 tataagttgttttcataagttatcctagagagcttatggaaataag 5924100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 10199477 - 10199412
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||| ||| |||  |||||| ||||    
T  10199477 ataagcttttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacat 10199412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 13975647 - 13975692
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  13975647 tataagctgttttcattagctgtcctagagagcttgtgaaaataag 13975692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 33976686 - 33976735
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||| ||||||| ||| ||||||||||||||||||| |||||||||||    
T  33976686 tataagttgttttcttaacctatcctagagagcttatggaaataagttga 33976735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 3224430 - 3224498
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagt 249  Q
    |||||| ||||||||| ||||||| |||||||||||||| |||||||  |||||| |||| | ||||||    
T  3224430 tgtttttataagctattctagagaacttatgaaaataagctgagaacaacttatggacatgtcataagt 3224498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 29249515 - 29249551
Alignment:
Q  179 gctgttttcataagctatcctagagagcttatgaaaa 215  Q
    ||||||||||| |||||||||||||||||||||||||    
T  29249515 gctgttttcatcagctatcctagagagcttatgaaaa 29249551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 34952217 - 34952273
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgctt 232  Q
    |||| |||||||||||||||||  ||||| |||||||||||||| ||| ||||||||    
T  34952217 taagttgttttcataagctatcaaagagaacttatgaaaataagctgaaaactgctt 34952273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 23902138 - 23902071
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||| |||||||| |||||||| ||||||||||||| || |||| ||| |||  |||||||||||    
T  23902138 ctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatgcacat 23902071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 31517811 - 31517744
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||| ||||||| || || | ||||||||||||||||||| ||| ||| ||||||| ||||    
T  31517811 ctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacat 31517744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 37842426 - 37842359
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||| ||||||||||||||||| |  ||| ||||| |||||||| ||| ||||||||||| ||||    
T  37842426 ctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacat 37842359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 4700137 - 4700091
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| ||||||| |||| ||||||| |||||||||||||||||||    
T  4700137 ctataaactgtttttataaactatcctggagagcttatgaaaataag 4700091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 5276320 - 5276398
Alignment:
Q  201 gagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgcttatgt 279  Q
    ||||||||| |||||||| |||| |||  |||||| |||| | ||||||| |  |||||||||||||||||| ||||||    
T  5276320 gagagcttaagaaaataacttgaaaacaacttatgaacatgtcataagttctcataaacagtctcacaagtgattatgt 5276398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 6279408 - 6279442
Alignment:
Q  183 ttttcataagctatcctagagagcttatgaaaata 217  Q
    ||||||||||||||||||||||||||||| |||||    
T  6279408 ttttcataagctatcctagagagcttatggaaata 6279442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 11639486 - 11639420
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||| |||||| |||||| ||| |||||||||||||||||||||| | | ||| ||||||| ||||    
T  11639486 tataaactgtttgcataagttattctagagagcttatgaaaataagctaaaaacagcttatggacat 11639420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 24915122 - 24915072
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||||||||||||||||||| || | |||| ||| ||||||||||||||    
T  24915122 ctataagctgttttcataagctgtcttggagaacttgtgaaaataagttga 24915072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 25005868 - 25005826
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaa 215  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||    
T  25005868 ctataagttgttttcataagctatcctggagagcttataaaaa 25005826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 26779996 - 26779946
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| ||||||||||||||||| |  ||| ||||||||||||||||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataagttga 26779946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 27140478 - 27140544
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||| |||||||||| | ||||||||||| ||||||| ||| |||  |||||| ||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacat 27140544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 31294592 - 31294542
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| ||||||  ||| ||||| |||||||||||||||||||||||||    
T  31294592 ctataagttgtttttgtaaactatcatagagagcttatgaaaataagttga 31294542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 33527220 - 33527178
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaa 213  Q
    |||||||||||||||||||||| |||||| |||| ||||||||    
T  33527220 atctataagctgttttcataagttatcctcgagatcttatgaa 33527178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 34290235 - 34290281
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||| |  ||| ||||||||||||||    
T  34290235 ctataagctgttttcataagctatcttgaagaacttatgaaaataag 34290281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 35350643 - 35350681
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  35350643 tgttttcataagctatcctaaagagcttatgtaaataag 35350681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 37240842 - 37240908
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||| ||||||| ||| | ||||||||||||| ||| |||  |||||| ||||    
T  37240842 tataagctgttttcataaactatccttgagggtttatgaaaataagctgataacatcttatgaacat 37240908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 38651494 - 38651456
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  38651494 tgttttcataagctatcctggagagcttataaaaataag 38651456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 45975693 - 45975751
Alignment:
Q  177 aagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||||||||||||||| | ||||  ||||||||||||| ||| ||| |||||||    
T  45975693 aagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 45975751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 49888774 - 49888812
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  49888774 tgttttcataagctatcttagagaacttatgaaaataag 49888812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 211
Target Start/End: Original strand, 50319277 - 50319307
Alignment:
Q  181 tgttttcataagctatcctagagagcttatg 211  Q
    |||||||||||||||||||||||||||||||    
T  50319277 tgttttcataagctatcctagagagcttatg 50319307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 1510035 - 1509930
Alignment:
Q  175 ataagctgttttcataagctatcctag-agagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgc 273  Q
    |||| |||||||||||| ||||| ||| ||   ||||||||||||| ||| ||| ||| ||| |||| | ||||||||| | ||||||| ||||| ||||    
T  1510035 ataaactgttttcataacctatcttaggagtatttatgaaaataagctgaaaacagctaatgaacatgtcataagttttttgaaacagtatcacaggtgc 1509936  T
Q  274 ttatgt 279  Q
    ||||||    
T  1509935 ttatgt 1509930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 6659513 - 6659582
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatat 242  Q
    ||||||| ||||||||||||||| || |||||||||||  ||||||| ||| |||  |||||| ||||||    
T  6659513 ctataagatgttttcataagctaaccaagagagcttatcgaaataagctgaaaacaacttatggacatat 6659582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 15558217 - 15558262
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||| ||||||||||| |||||  |||||||    
T  15558217 tataagctgttttcataagatatcctagagaacttatagaaataag 15558262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 23407431 - 23407480
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||||||| ||| |||||||| |||| ||| ||||||||    
T  23407431 tataagctgttttcataagttattctagagagtttatcaaattaagttga 23407480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 35179139 - 35179200
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||||||||||||| |||  | |||| |||||||||||||| ||| ||| |||||||    
T  35179139 tataagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatg 35179200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 38882981 - 38882933
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||| |||||||||||||| || |||||| ||||||||||||||||||    
T  38882981 tataagttgttttcataagctctc-tagagaacttatgaaaataagttga 38882933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 43112826 - 43112871
Alignment:
Q  116 gataaacaacctaattagtagcttttagcataaatgcttatcatat 161  Q
    |||| ||||| |||||||| |||| |||||||||||||||||||||    
T  43112826 gatagacaacttaattagttgcttgtagcataaatgcttatcatat 43112871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 49938747 - 49938796
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||| |||||| |||||||||  |||||| ||||||||||||||||||    
T  49938747 tataagttgtttttataagctatattagagaacttatgaaaataagttga 49938796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 52013904 - 52013945
Alignment:
Q  180 ctgttttcataagctatcctagagagcttatgaaaataagtt 221  Q
    |||||||| ||||||||||||||| ||||||| |||||||||    
T  52013904 ctgttttcgtaagctatcctagagtgcttatggaaataagtt 52013945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 1565603 - 1565539
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||| ||| ||||  | ||||||| ||||||||||| ||| ||| ||||||||||||    
T  1565603 taagctgttttcttaatctattttggagagctcatgaaaataagctgaaaacagcttatgcacat 1565539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 4078222 - 4078174
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||| ||||||||||||||||| | | ||||| |||||||||||    
T  4078222 atctataagttgttttcataagctatcatggcgagctaatgaaaataag 4078174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 4548722 - 4548766
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||| | ||||||||  |||||||||    
T  4548722 ataagctgttttcataagctatcttggagagcttcagaaaataag 4548766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 37811854 - 37811918
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||| ||| | ||||||| ||| ||||||||||| ||| | ||||| ||||    
T  37811854 taagctgttttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaacat 37811918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 43722220 - 43722184
Alignment:
Q  182 gttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  43722220 gttttcataagctattctagagagcttattaaaataa 43722184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 47020515 - 47020555
Alignment:
Q  182 gttttcataagctatcctagagagcttatgaaaataagttg 222  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  47020515 gttttcataagctatcttagagagcttacggaaataagttg 47020555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 47598490 - 47598454
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatg 211  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  47598490 ataagttgttttcataagctatcctggagagcttatg 47598454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 51256893 - 51256853
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaa 214  Q
    |||||| ||||||||||||||||||||| ||| ||||||||    
T  51256893 tataagttgttttcataagctatcctagcgagattatgaaa 51256853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 51929768 - 51929724
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||| | || |||||||| |||||||    
T  51929768 ataagctgttttcataagctatcttggaaagcttatgtaaataag 51929724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 11264301 - 11264377
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||| |||| | |||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagtt 11264377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 35571702 - 35571652
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  35571702 ctataagctgttttcataagctatcttagagaacttgtgaaaataagttga 35571652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 2996573 - 2996649
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||| ||||||||||||||||| | |||||| |||||||||||||||| ||  ||||||| |||| | |||||||    
T  2996573 tataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagtt 2996649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 47800623 - 47800683
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttat 234  Q
    |||||||||||||||||||||||| |  |||||||||||||||||| ||| ||| ||||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaaccgcttat 47800683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 53673728 - 53673656
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgata 246  Q
    ||||| |||||||||||||||||| | ||||||||||| ||||||| ||| |||  |||||| ||||||||||    
T  53673728 tataaactgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatggacatatgata 53673656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 6466119 - 6466040
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||||| ||||| |||||||||| |||||||| ||||| ||||||||||| ||  ||||||| |||| | |||||||    
T  6466119 atctataagttgtttccataagctattctagagagattatggaaataagttgaaaatagcttatgaacatctcataagtt 6466040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 42865997 - 42866105
Alignment:
Q  106 gccctgtttggataaacaacctaatt-agtagcttttagcataaatgcttatcatattattttcatat---ctataagctgttttcataagctatcctag 201  Q
    |||||||||||||||||||| ||||| | || ||| |||||||| || |||||| | | |||| ||||   ||||||| ||||||||||||||||||| |    
T  42865997 gccctgtttggataaacaacttaatttaata-cttatagcataagtgtttatcaaactgtttttatataagctataagttgttttcataagctatccttg 42866095  T
Q  202 agagcttatg 211  Q
    ||||||||||    
T  42866096 agagcttatg 42866105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 29601079 - 29601033
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  29601079 ctataatctgttttcatatgctatcctagagaacttatgaaaataag 29601033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 42121487 - 42121592
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtg 272  Q
    ||||||| ||||||||| ||||||| | |||| ||| || ||||||| ||| ||| ||||||| |||| | ||||||| | | |||||||||||||| ||    
T  42121487 ctataagttgttttcatgagctatcttggagaacttgtggaaataagctga-aacagcttatgaacatgtcataagttctctcaaacagtctcacaaatg 42121585  T
Q  273 cttatgt 279  Q
    |||||||    
T  42121586 cttatgt 42121592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 50742899 - 50742857
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  50742899 tgttttcataagctatcctggagagcttatgaaaatgagttga 50742857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 1706621 - 1706670
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttg 222  Q
    ||||||||||||||||||| ||||| | || |||||||||||||||||||    
T  1706621 ctataagctgttttcataaactatcttggacagcttatgaaaataagttg 1706670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 27721717 - 27721778
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||||||||||||| |||||| ||||||||  ||||||||| ||| ||| |||||||    
T  27721717 tataagctgttttcataagttatcctggagagcttgcgaaaataagctgaaaacagcttatg 27721778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 51044543 - 51044506
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||||||||||||||| |||||||||||||    
T  51044543 tgttttcataagctatcctagagaacttatgaaaataa 51044506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 52259631 - 52259680
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  52259631 tataagctgtttttataagctatctgggagagcttatgaaaataagttga 52259680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 55084549 - 55084485
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||| ||| | | ||||||| ||||    
T  55084549 taagttgttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaacat 55084485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 56480348 - 56480392
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||    
T  56480348 tataagctgttttcataaactatcttggagagcttatgaaaataa 56480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 1137709 - 1137756
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||| |||||||| |||||| |||||||||||| ||||||    
T  1137709 atctataagctgctttcataaactatccaagagagcttatggaaataa 1137756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 7694081 - 7694014
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||| |||||| ||||| ||||| ||||||| ||| |||  |||||| ||||    
T  7694081 ctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacat 7694014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 12650355 - 12650312
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaat 216  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  12650355 ctataagctgttttcataacctatcctggagagcttatggaaat 12650312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 17883566 - 17883527
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttat 210  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  17883566 atctataagctgttttcataaggtatcctagcgagcttat 17883527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 2900339 - 2900385
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||| |||||||| ||||||| |||| ||||||||    
T  2900339 ctataagctgttttcacaagctatcatagagagattataaaaataag 2900385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 15132389 - 15132347
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||    
T  15132389 tgtttttataagctatactagatagcttatgaaaataagttga 15132347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 16200052 - 16200006
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||| | |||  ||||||||||||||    
T  16200052 ctataagctgttttcataagctatcttggaggacttatgaaaataag 16200006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 17822936 - 17822890
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||| ||||||||||||||||| | |||| ||||||||||||||    
T  17822936 ctataagttgttttcataagctatcttggagaacttatgaaaataag 17822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 21952655 - 21952721
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||||||| || | |||||||||||| ||  ||| ||||| ||||| ||||    
T  21952655 tataagctgttttcataagctatcataaatagcttatgaaaacaaaatgaaaactgtttatgaacat 21952721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 24169270 - 24169312
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||||| |||||||| | |||||||||||||||||||||||    
T  24169270 tgttttcacaagctatcttggagagcttatgaaaataagttga 24169312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 36048532 - 36048578
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||| |||||| |||||||| ||||||||||||| |||||||    
T  36048532 ctataagctattttcaaaagctatcttagagagcttatggaaataag 36048578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 44319952 - 44319998
Alignment:
Q  177 aagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||| |||| ||||||||||||||||| ||||||||||| ||||||    
T  44319952 aagctattttgataagctatcctagagaacttatgaaaattagttga 44319998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 6979033 - 6978972
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttat 234  Q
    ||||||| |||||| |||||| |||||| |||| ||||||||||||| ||| ||| ||||||    
T  6979033 ctataagttgtttttataagccatcctaaagagtttatgaaaataagctgaaaacagcttat 6978972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 8468955 - 8468992
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  8468955 tgttttcataagttattctagagagcttatgaaaataa 8468992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 10192284 - 10192332
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||| |||||||| |||||||||| ||||||| |||||||||||||||    
T  10192284 tataagttgttttcaaaagctatcctggagagct-atgaaaataagttga 10192332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 11158427 - 11158382
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| ||||||||||||||||| |||||||||| || |||||||    
T  11158427 tataagttgttttcataagctatcttagagagcttgtggaaataag 11158382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 29263371 - 29263444
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataag 248  Q
    ||||| |||||||||||||||||||  ||||||| || ||||||| ||| |||  |||||| |||||| |||||    
T  29263371 ataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatcataag 29263444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 39063710 - 39063673
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  39063710 tgtttttataagctatcctggagagcttatgaaaataa 39063673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 49893315 - 49893352
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatg 211  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  49893315 tataagctgttttcgtaagctatccttgagagcttatg 49893352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 53315325 - 53315398
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgata 246  Q
    |||||||||||| ||| || | | ||||||||||||||||||||||||| | ||  ||||||| |||| |||||    
T  53315325 ctataagctgttctcaaaaacaaacctagagagcttatgaaaataagttaaaaatagcttatggacatgtgata 53315398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 6360783 - 6360739
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||| ||||||||||||||||||| | ||||||||| ||||||||    
T  6360783 tatacgctgttttcataagctatcatggagagcttaggaaaataa 6360739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 27321898 - 27321854
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||| |||||| |||||||||| |||||||||||| ||||||    
T  27321898 ataagctattttcaaaagctatcctggagagcttatgacaataag 27321854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 30066834 - 30066762
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataag 248  Q
    ||||||||| |||||||||||| | |||||||||| |||| ||| ||| ||| | ||||| |||||| |||||    
T  30066834 taagctgttctcataagctatcttggagagcttataaaaacaagctgaaaacagattatgaacatattataag 30066762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 30207642 - 30207582
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgctta 233  Q
    ||||||| ||||||||||||||| | ||||||| ||||| ||||||| ||| ||| |||||    
T  30207642 ctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagctta 30207582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 3237093 - 3237136
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaata 217  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  3237093 tataagctgttttcataagctatcctaaagagcttatgaaaata 3237136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 41957521 - 41957455
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||| |||  |||||| ||||    
T  41957521 tataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacat 41957455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 17258952 - 17258887
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| ||| ||| ||||||| ||||    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacat 17258887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 4014493 - 4014433
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||||||||||||||||| | |||| |||||||||||||| ||| ||| |||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 11684414 - 11684513
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgc 273  Q
    |||||||| |||||||||||||| || ||||||||| | ||||||||||| ||| |||||   || | | ||||| ||| ||||||||||||||||||||    
T  11684414 tataagctattttcataagctatgctggagagcttacggaaataagttgaaaacagctta-caacgtgtcataagctttcttaaacagtctcacaagtgc 11684512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 17368673 - 17368752
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||||| ||||||||||||||||| | ||||| ||||| ||||||| ||| |||||| |||| |||| | |||||||    
T  17368673 atctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagtt 17368752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 30217079 - 30217126
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  30217079 atctataagctgctttcataagctatcctggagagcttatggaaataa 30217126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 36638750 - 36638813
Alignment:
Q  177 aagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||| ||  ||||||| ||||    
T  36638750 aagctgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacat 36638813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 6593298 - 6593344
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||    
T  6593298 ctataagctgttttgataagctaccttagagagcttatgaaaataag 6593344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 12425570 - 12425620
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||||||||||||| |||||||| | |||| ||||||||||||||||||    
T  12425570 ctataagctgttttcacaagctatcttggagaacttatgaaaataagttga 12425620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 279
Target Start/End: Complemental strand, 25461387 - 25461281
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtg 272  Q
    |||||| |||||||||||| ||||| | | |   ||||||||||||| ||| ||| ||| ||| |||| | ||||||||| | |||||||||||||||||    
T  25461387 ctataaactgttttcataacctatcttggcgtatttatgaaaataagctgaaaacagctaatgaacatgtcataagttttttgaaacagtctcacaagtg 25461288  T
Q  273 cttatgt 279  Q
    || ||||    
T  25461287 ctaatgt 25461281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 3951593 - 3951664
Alignment:
Q  155 atcatattattttcatat---ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||| |||||||||||||   |||||||||||||| |||||||||||| ||||| |||| | ||||||||||    
T  3951593 atcaaattattttcatattagctataagctgtttttataagctatcctggagagattattataataagttga 3951664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 7319078 - 7319025
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaac 227  Q
    ||||| |||||||||||||||||| | |||| |||||||||||||| |||||||    
T  7319078 tataaactgttttcataagctatcttggagaacttatgaaaataagctgagaac 7319025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 14182450 - 14182402
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  14182450 tataagctgttttcataagttatcct-gagaacttatgaaaataagttga 14182402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 16889734 - 16889779
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||    
T  16889734 ctataagctgttttcataagctatgctagagagtttatggaaataa 16889779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 25705730 - 25705669
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttat 234  Q
    |||||||||||||||||||||||||| | ||  ||| |||||||||||||| ||| ||||||    
T  25705730 ctataagctgttttcataagctatccaaaaggtcttgtgaaaataagttgaaaacagcttat 25705669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 18543266 - 18543226
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaa 214  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  18543266 tataagttgttttcataagctatcctggagagcttatgaaa 18543226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 32197720 - 32197780
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttat 234  Q
    |||||||||||| |||||||||||||  ||| |||||||||||||| ||| ||| ||||||    
T  32197720 tataagctgtttccataagctatcctgaagaacttatgaaaataagatgaaaacagcttat 32197780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 36542353 - 36542305
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagtt 221  Q
    |||||||||| || |||||||||||||||||||||| || |||||||||    
T  36542353 ctataagctgattccataagctatcctagagagcttgtggaaataagtt 36542305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 38047942 - 38047888
Alignment:
Q  160 attattttcatat---ctataagctgttttcataagctatcctagagagcttatg 211  Q
    |||||||||||||   ||||| ||||||||||||||||||||| |||||||||||    
T  38047942 attattttcatatatactatatgctgttttcataagctatcctggagagcttatg 38047888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 38104929 - 38104882
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  38104929 atctataagctgttt-cataagctatcttagagagcttatggaaataag 38104882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 40731476 - 40731512
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaata 217  Q
    ||||||||||||||||||| |||||||||||||||||    
T  40731476 tgttttcataagctatccttgagagcttatgaaaata 40731512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 13604917 - 13604870
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  13604917 taagctgttttcataagttatcttgaagagcttatgaaaataagttga 13604870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 15309064 - 15308989
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataag 248  Q
    ||||||| ||||||||| ||||||| | |||| |||||||||||||| ||| ||| | ||||| |||||| |||||    
T  15309064 ctataagttgttttcattagctatcattgagatcttatgaaaataagatgaaaacaggttatgaacatatcataag 15308989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 29201532 - 29201575
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaat 216  Q
    ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  29201532 ctataagctgttttcataacctatcctggagagcttatggaaat 29201575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 2568657 - 2568703
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||| ||||||||||||||||| | ||||||| |||||||||||    
T  2568657 ctataagttgttttcataagctatcatggagagctaatgaaaataag 2568703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 7984968 - 7985030
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||| ||||||||||||||| | ||||  ||||||||||||| ||| ||| |||||||    
T  7984968 ctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 7985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 11615501 - 11615567
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||||| ||||||   ||||||||| ||||||| ||| ||| ||||||| ||||    
T  11615501 tataagctgttttcataagatatccttatgagcttatggaaataagctgaaaacagcttatgaacat 11615567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 28776992 - 28777038
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||| | |||| || |||||||||||    
T  28776992 ctataagctgttttcataagctatcttggagaactaatgaaaataag 28777038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 32942617 - 32942659
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaa 215  Q
    ||||||||||||||||||||||||| | |||| ||||||||||    
T  32942617 ctataagctgttttcataagctatcttggagaacttatgaaaa 32942659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 33533610 - 33533560
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| |||||||| |||||||| | ||||||||||| |||||||||||    
T  33533610 ctataaggtgttttcacaagctatcttggagagcttatggaaataagttga 33533560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 39105463 - 39105509
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| |||||||||||||||||| | |||| ||||||||||||||    
T  39105463 ctataatctgttttcataagctatcttggagaacttatgaaaataag 39105509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 40534199 - 40534253
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaact 228  Q
    |||||| |||||||||||||||||| |||||||||||| || |||| ||| ||||    
T  40534199 tataagttgttttcataagctatcccagagagcttatggaagtaagatgaaaact 40534253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 3255805 - 3255752
Alignment:
Q  108 cctgtttggataaacaacctaattagtagcttttagcataaatgcttatcatat 161  Q
    |||||||||||||||||| || || | || || |||||||||||||||||||||    
T  3255805 cctgtttggataaacaacttattttgaagtttatagcataaatgcttatcatat 3255752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 3947626 - 3947581
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||| ||||||||| |||| ||| |||||||||||||    
T  3947626 tataagctgtttttataagctattctagcgagattatgaaaataag 3947581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 10771958 - 10771913
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| || ||||||||||||||| |||||| |||||||||||||    
T  10771958 tataagttgctttcataagctatccgagagagtttatgaaaataag 10771913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 11707055 - 11707100
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataag 11707100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 15003585 - 15003540
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||  ||||||||||||||||| |||||||||||| ||||||    
T  15003585 ctataagtggttttcataagctatccaagagagcttatggaaataa 15003540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 18875361 - 18875410
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||| ||||| |||||| ||||||||||| ||| |||||||    
T  18875361 tataagctgttttaataagatatcctggagagcttatggaaacaagttga 18875410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 37588431 - 37588370
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttat 234  Q
    ||||||| |||||||||||| ||| || ||||||||||| ||||||| ||| ||| ||||||    
T  37588431 ctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttat 37588370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 3970753 - 3970705
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||| |||||  ||||||||||||| || |||||||||||||||||||    
T  3970753 atctagaagctaatttcataagctatactggagagcttatgaaaataag 3970705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 21768265 - 21768201
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||| |||| |  |||||||| ||||||||||||| ||| || |||| ||||    
T  21768265 taagctgttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacat 21768201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 29845020 - 29844972
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||| || ||||| ||| ||||||||||| |||||||    
T  29845020 atctataagctgtttttattagctaccctggagagcttatggaaataag 29844972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 32408679 - 32408617
Alignment:
Q  160 attattttcatat---ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||   |||||| || |||||||||||||||||  |||||||||| |||||||    
T  32408679 attattttcatataagctataaactattttcataagctatcctgaagagcttatggaaataag 32408617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 40205142 - 40205078
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||| ||||||||||||||||||| ||||||||||  ||||||| ||| ||| | ||||| ||||    
T  40205142 taagttgttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacat 40205078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 3044332 - 3044253
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||||| |||||||| || |||| ||| ||||||||||||||||||||||| ||| ||||||| |||| | |||||||    
T  3044332 atctataacctgttttcttatgctaacctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagtt 3044253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 24158572 - 24158525
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataagttg 222  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  24158572 ataagctgttttcataagctatcctggagagcttatggaaataagttg 24158525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 24280710 - 24280760
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  24280710 ctataagctgttgtcataagctatcatggagagcttatgaaaataagttga 24280760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 25925764 - 25925846
Alignment:
Q  196 tcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgcttatg 278  Q
    |||| ||||||||||||||||||||||| ||| ||||||| |||| | ||||||| | | ||||||| | |||||||||||||    
T  25925764 tcctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcataagttctctaaaacagtgttacaagtgcttatg 25925846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 39602280 - 39602231
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||    
T  39602280 tataagctgttttcataagctatctttgagaacttatgaaaataagttga 39602231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 21335677 - 21335720
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  21335677 taagctgttttcataagctatactagagaacttatgaaaataag 21335720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 47319342 - 47319295
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagt 220  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  47319342 ctataagctgttgtcataatctatcttagagagcttatgaaaataagt 47319295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 1217870 - 1217804
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||| ||| |||  |||||| ||||    
T  1217870 tataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacat 1217804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 2719467 - 2719521
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaac 227  Q
    |||||| |||||||||||||||||| | |||| |||||||||||||| |||||||    
T  2719467 ctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaac 2719521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 6801855 - 6801901
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttg 222  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  6801855 taagttgtattcataagctatcctagagagcttacgaaaataagttg 6801901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 20502139 - 20502093
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||||    
T  20502139 ctataagctgttttcataagctatcctgaagagcttatgagaataag 20502093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 20669172 - 20669238
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||  || ||| ||||||| ||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacat 20669238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 34924609 - 34924563
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||||    
T  34924609 ctatgagctattttcataagctatcttagagagcttatgaaaataag 34924563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 4013549 - 4013504
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  4013549 tataagctgttttcattagctgtcctagagagcttgtgaaaataag 4013504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 41644515 - 41644454
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    |||||||||||||||||||||||| |||||| |||| | ||||||| ||| ||| |||||||    
T  41644515 tataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatg 41644454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 24785202 - 24785250
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||  ||||||||||||||||||| ||||||||||| |||||||    
T  24785202 atctataacgtgttttcataagctatcctcgagagcttatgtaaataag 24785250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 22203427 - 22203474
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||||| ||||||||||||||||| | |||| |||||||||||||    
T  22203427 atctataagttgttttcataagctatcttggagaacttatgaaaataa 22203474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 22214730 - 22214663
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||| ||||||||||||||||||||||||  ||| | ||||||| ||| ||| ||||||| ||||    
T  22214730 ctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagcttatggacat 22214663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 36646445 - 36646386
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||||||||||| ||||  ||||||| ||| ||| ||||||| ||||    
T  36646445 tgttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacat 36646386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 37273135 - 37273210
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||| |||||||||||||||||| | |||| |||||| ||||||||||| |||  |||||| |||| | |||||||    
T  37273135 ataaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagtt 37273210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 45535286 - 45535239
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||| |||||||||||||||| || ||||| |||||||||||||||||    
T  45535286 taagatgttttcataagctatactggagagtttatgaaaataagttga 45535239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 237397 - 237463
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||| |||||||||||| ||||||| |||||||| | ||||||| ||| ||| ||||||| ||||    
T  237397 tataagttgttttcataagttatcctatagagcttacggaaataagctgaaaacagcttatggacat 237463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 6483812 - 6483846
Alignment:
Q  185 ttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||||||||||||||| ||||||||    
T  6483812 ttcataagctatcctagagagcttattaaaataag 6483846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 21367667 - 21367725
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgctt 232  Q
    |||||| ||||||||||||||||| | |||| |||||||||||||| ||| ||| ||||    
T  21367667 tataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagctt 21367725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 24887350 - 24887316
Alignment:
Q  177 aagctgttttcataagctatcctagagagcttatg 211  Q
    ||||||||||||||||||||||| |||||||||||    
T  24887350 aagctgttttcataagctatcctggagagcttatg 24887316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 25170815 - 25170856
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  25170815 tgttttcataagctatctt-gagagcttatgaaaataagttga 25170856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 28622070 - 28622008
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||||||||||||| ||||| | |||| |||||||||||||  ||| ||| |||||||    
T  28622070 ctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatg 28622008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 32064450 - 32064488
Alignment:
Q  185 ttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  32064450 ttcataaactatcctaaagagcttatgaaaataagttga 32064488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 38462280 - 38462326
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| ||||||||||||||||||| ||| |||||||| |||||||    
T  38462280 ctataaactgttttcataagctatccaagatagcttatggaaataag 38462326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 40665429 - 40665495
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||| |||||||||||| |||| | |||||||||| |||||||| ||| ||| ||||||| ||||    
T  40665429 tataagatgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacat 40665495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 41452525 - 41452599
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||||||||||||||||||||| ||||  || || ||||||| ||| ||| ||||||  |||||| |||||||    
T  41452525 taagctgttttcataagctatcctggagaagttgtggaaataaggtgaaaacagcttatagacatatcataagtt 41452599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 44747479 - 44747433
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||| | || | ||||||||||||||    
T  44747479 ctataagctgttttcataagctatcttggaaaacttatgaaaataag 44747433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 1816583 - 1816628
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| |||||||||||||||| || |||||||||| ||||||||    
T  1816583 tataagttgttttcataagctatactggagagcttatcaaaataag 1816628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 25075066 - 25075111
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||| ||||||||||||||| |||||| || |||||||||||    
T  25075066 tataagctcttttcataagctatcatagagaactaatgaaaataag 25075111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 30573987 - 30573918
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||| | ||||||||||||||||| | ||||||| ||||| ||||| ||| ||| ||||||| ||||    
T  30573987 atctatatgatgttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacat 30573918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 31010405 - 31010478
Alignment:
Q  177 aagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||||||| ||| ||||| ||||||||||||| || |||| ||| ||| ||||||| |||| | |||||||    
T  31010405 aagctgttttcgtaacctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagtt 31010478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 46886763 - 46886718
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||||||||||||||||||||| | |||| ||| |||||||||    
T  46886763 ctataagctgttttcataagctatcttggagaacttttgaaaataa 46886718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 2825156 - 2825192
Alignment:
Q  183 ttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||| | |||||||||||||||||||    
T  2825156 ttttcataagctatcttggagagcttatgaaaataag 2825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 11253501 - 11253536
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagctta 209  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11253501 ctataagctgttt-cataagctatcctagagagctta 11253536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 16790407 - 16790447
Alignment:
Q  183 ttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  16790407 ttttcataagctatccaagatagcttatgaaaataatttga 16790447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 20874375 - 20874339
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagctta 209  Q
    |||||||||||||||||||||||||||| | ||||||    
T  20874375 ctataagctgttttcataagctatcctaaatagctta 20874339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 24785273 - 24785305
Alignment:
Q  186 tcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||||||| ||||||||||||||||    
T  24785273 tcataagctatcctagggagcttatgaaaataa 24785305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 25964442 - 25964482
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaa 213  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  25964442 ctataagctgttttcataagctatcccggaaagcttatgaa 25964482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 41633361 - 41633405
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||| ||||||  | |||||||||||||||||||    
T  41633361 ataagctgttttcatcagctattttggagagcttatgaaaataag 41633405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 52412974 - 52412914
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttat 234  Q
    |||||||| |||||||||| | ||||||||||| |||| ||||||| ||| ||| ||||||    
T  52412974 tataagctattttcataagttgtcctagagagcatatggaaataagctgaaaacagcttat 52412914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 54775127 - 54775203
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    |||||||||||||| |||| |||| | ||||| ||||||||||||| ||| | | ||||||| |||||  |||||||    
T  54775127 tataagctgttttcgtaagttatcatggagagtttatgaaaataagatgaaagcagcttatggacataacataagtt 54775203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 529379 - 529436
Alignment:
Q  178 agctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||| ||| |||||||    
T  529379 agctgttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatg 529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 28340915 - 28340878
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttat 210  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28340915 ctataagctgttttcataagctatcctagagagcttat 28340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 44821959 - 44822008
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  44821959 tataagctgttttcataagctattctggagaacttatgaaaataagttga 44822008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 25596031 - 25596082
Alignment:
Q  172 tctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| || ||||||||||||||| | |||||||||||||||||||||||    
T  25596031 tctataaactcttttcataagctatcttggagagcttatgaaaataagttga 25596082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 38010713 - 38010780
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||| | | ||| ||||||| ||||    
T  38010713 ctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacat 38010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 514766 - 514812
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||||||||||| |||||||| | ||||||||    
T  514766 ctataagctgttttcataagctatcctggagagcttgtcaaaataag 514812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 1350315 - 1350269
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaata 217  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||    
T  1350315 atctataagctgttttcataaactatcctgaagagcttatgaaaata 1350269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 6601367 - 6601433
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||| ||||||||| || ||| ||||||||||||||| ||||||  ||||||| ||||    
T  6601367 tataagctgtttttataagctattctggagtgcttatgaaaataagctgagaatagcttatggacat 6601433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 21453293 - 21453339
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||    
T  21453293 ctataaactgttttcataagctatcctagagagctaatgaagataag 21453339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 39967919 - 39967981
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||| |||||||||||||||||  ||||| || ||||||||||||||| ||| |||||||    
T  39967919 ctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatg 39967981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 40530480 - 40530430
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||| |||||| ||||||||||||| ||| ||||||||||||||||||    
T  40530480 ctataagttgttttaataagctatcctaaagaacttatgaaaataagttga 40530430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 5628636 - 5628591
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||    
T  5628636 tataagctgttttcataagatatcacagagagcttatgaaaataag 5628591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 39771760 - 39771837
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||| |||||||||| | |||| ||||| ||| ||| ||||||||||| ||| ||||||| |||||| |||||||    
T  39771760 ctataagttgttttcataggttatcatagagtgctaatggaaataagttgaaaacagcttatggacatatcataagtt 39771837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 7521273 - 7521317
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||| |||| |||||||||||||||| ||||||||||    
T  7521273 ataagctgttttaataaactatcctagagagcttctgaaaataag 7521317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 30723109 - 30723065
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||    
T  30723109 tataagctattttcataagctatcctggagagcttttgaaaataa 30723065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 40689073 - 40689011
Alignment:
Q  160 attattttcatat---ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||||||||||||   ||||||||||| ||||||||||||||| || | ||||||||||||||    
T  40689073 attattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataag 40689011  T

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Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 4966156 - 4966231
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagt 249  Q
    |||||||||||||||||||| |||||  |||||||||| ||||||  ||| |||  |||||| |||||| ||||||    
T  4966156 tataagctgttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatggacatatcataagt 4966231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 18350777 - 18350738
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaa 213  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  18350777 tataagctgttttcataagctatcatggagagcttatgaa 18350738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 30535560 - 30535639
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagtt 250  Q
    ||||||||||||||| ||||||||||| || ||| | |||||||||||  ||| ||| ||||| | |||||| |||||||    
T  30535560 atctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaacatatcataagtt 30535639  T

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Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 39542370 - 39542323
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagtt 221  Q
    |||||| ||||| |||||| |||||| |||||||||||||||||||||    
T  39542370 tataagttgtttccataagttatcctggagagcttatgaaaataagtt 39542323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 47941320 - 47941367
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||| |||||||||||||||||||  ||||| ||||||||||||    
T  47941320 atctataaactgttttcataagctatcccggagagtttatgaaaataa 47941367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 48917414 - 48917371
Alignment:
Q  176 taagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    |||| ||||||||||||||||| | |||||||||||||||||||    
T  48917414 taagttgttttcataagctatcttggagagcttatgaaaataag 48917371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 2825302 - 2825256
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||| |||||||| ||||||||||||||| |||||| |||||||    
T  2825302 ctataagttgttttcacaagctatcctagagaacttatggaaataag 2825256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 18749887 - 18749821
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    ||||||||||||||||||||||||   || | |||||| ||||||| ||| ||||||||||| ||||    
T  18749887 tataagctgttttcataagctatcacggaaaacttatggaaataagctgaaaactgcttatgaacat 18749821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 24363671 - 24363605
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatgcacat 240  Q
    |||||| ||||||||||||||||||| ||||| ||||| ||||||| ||| |||  |||||| ||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacat 24363605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 27378892 - 27378854
Alignment:
Q  180 ctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  27378892 ctgttttcataaactatcctggagagcttatgaaaataa 27378854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 28165090 - 28165152
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    |||||| |||| || |||||||||| | ||||||||||| ||||||||||| ||| |||||||    
T  28165090 ctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaacagcttatg 28165152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 30812147 - 30812193
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||| ||||||| | ||||||||||| |||||||    
T  30812147 ctataagctgttttcattagctatcatggagagcttatggaaataag 30812193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 33552913 - 33552875
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  33552913 tgttttcataagctatcttagagaacttatgaaaataag 33552875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 33678779 - 33678829
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    ||||||||||||||||||||||||| | || | ||| ||||||||||||||    
T  33678779 ctataagctgttttcataagctatcttggaaaacttgtgaaaataagttga 33678829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 46104638 - 46104592
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||| |||||||||||||||| ||  ||||||||||||||||||    
T  46104638 ctataagttgttttcataagctatgctgaagagcttatgaaaataag 46104592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 47130855 - 47130801
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaact 228  Q
    |||||| ||||||||||||||||| | |||| ||| |||||||||||||| ||||    
T  47130855 tataagttgttttcataagctatcttggagaacttgtgaaaataagttgaaaact 47130801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 5369762 - 5369722
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaa 214  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  5369762 ctataagctgttttcataagctatcccagag-gcttatgaaa 5369722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 12110359 - 12110404
Alignment:
Q  173 ctataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||||||||||||||||||||| |  ||| |||||||||||||    
T  12110359 ctataagctgttttcataagctatcttgaagaacttatgaaaataa 12110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 28691898 - 28691861
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  28691898 tgttttcataagctatcctggagatcttatgaaaataa 28691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 39334193 - 39334238
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||||||||||| |||||||||| | ||||||||| |||||||    
T  39334193 tataagctgttttcaaaagctatcctggcgagcttatggaaataag 39334238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 43648240 - 43648289
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttga 223  Q
    |||||||||||||||||||||||| | ||||   ||||||||||||||||    
T  43648240 tataagctgttttcataagctatcttggagaaaatatgaaaataagttga 43648289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 3468614 - 3468662
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttg 222  Q
    |||||||| ||||||||| |||||||||||| ||| || ||||||||||    
T  3468614 tataagcttttttcataatctatcctagagaacttgtggaaataagttg 3468662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 3968827 - 3968783
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    |||||||| ||||||||||||||||| ||||| ||||| ||||||    
T  3968827 tataagctattttcataagctatcctggagagtttatggaaataa 3968783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 11753091 - 11753051
Alignment:
Q  177 aagctgttttcataagctatcctagagagcttatgaaaata 217  Q
    ||||||||||||||| |||||||||| || |||||||||||    
T  11753091 aagctgttttcataaactatcctagaaagattatgaaaata 11753051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 12792632 - 12792588
Alignment:
Q  175 ataagctgttttcataagctatcctagagagcttatgaaaataag 219  Q
    ||||||| ||||||||||||||| |  ||||||||||||||||||    
T  12792632 ataagctattttcataagctatcttgaagagcttatgaaaataag 12792588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 27481484 - 27481432
Alignment:
Q  109 ctgtttggataaacaacctaattagtagcttttagcataaatgcttatcatat 161  Q
    ||||||||||||||||| |||||||  |||| ||||||||||| |||| ||||    
T  27481484 ctgtttggataaacaacttaattaggtgcttatagcataaatgtttattatat 27481432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 29363518 - 29363562
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataa 218  Q
    ||||||||||| ||||||| |||||| ||||||||||| ||||||    
T  29363518 tataagctgttatcataagttatcctggagagcttatggaaataa 29363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 39169488 - 39169449
Alignment:
Q  171 atctataagctgttttcataagctatcctagagagcttatg 211  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  39169488 atctataaactgttttcataagctatcct-gagagcttatg 39169449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 47354114 - 47354154
Alignment:
Q  180 ctgttttcataagctatcctagagagcttat-gaaaataag 219  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  47354114 ctgttttcataacctatcctagagagcttatggaaaataag 47354154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 160043 - 159983
Alignment:
Q  174 tataagctgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttat 234  Q
    |||||| |||||||||||||||||||| ||||||| || ||||||| ||| ||||||||||    
T  160043 tataagatgttttcataagctatcctaaagagcttgtggaaataagctgaaaactgcttat 159983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 306333 - 306387
Alignment:
Q  181 tgttttcataagctatcctagagagcttatgaaaataagttgagaactgcttatg 235  Q
    ||||||||||||||||||||||||||||||| || |||| ||| ||| |||||||    
T  306333 tgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatg 306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 276
Target Start/End: Original strand, 27017 - 27103
Alignment:
Q  190 aagctatcctagagagcttatgaaaataagttgagaactgcttatgcacatatgataagttttgttaaacagtctcacaagtgctta 276  Q
    |||||||| ||||||||||||| ||||||| ||| ||| | |||||||||| | ||||| | |   ||||||| |||||||||||||    
T  27017 aagctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataagctctcgcaaacagtgtcacaagtgctta 27103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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